organic compounds
3-(Dihydroxyboryl)anilinium 6-carboxypyridine-2-carboxylate
aCollege of Chemistry, Liaoning University, Shenyang, Liaoning 110036, People's Republic of China
*Correspondence e-mail: xdzhang@lnu.edu.cn
In the anion of the title molecular salt, C6H9BNO2+·C7H4NO4−, the dihedral angles between the –COO2− and –CO2H groups and their attached ring are 4.02 (13) and 21.41 (10)°, respectively. The B atom in the cation adopts a syn–syn geometry and the dihedral angle between the –B(OH)2 group and its attached ring is 11.06 (5)°. In the crystal, O—H⋯O, N—H⋯O and N—H⋯N hydrogen bonds link the components into a three-dimensional network.
Related literature
For general background, see: Hall (2005). For related structures, see: Li et al. (1995); SeethaLekshmi & Pedireddi (2006); Sokolov & MacGillivray (2006); Vega et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: Mercury (Macrae et al., 2006), PLATON (Spek, 2009), SHELXL97 and WinGX (Farrugia, 1999).
Supporting information
https://doi.org/10.1107/S1600536812031790/cv5313sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812031790/cv5313Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812031790/cv5313Isup3.cml
An ethanolic solution of 2,6-pyridinedicarboxylic acid(0.5 mmol in 10 ml e thanol)was added dropwise to 3-aminophenyl boronic acid monohydrate (0.5 mmol in 5 ml e thanol) with stirring. Single crystals suitable for X-ray analysis were obtained by slow evaporation of the solvent at room temperature.
Atom H1A was located in a difference Fourier map and refined with a distance restraint O—H = 0.96 (2) Å. All other H atoms were positioned geometrically and refined using riding model, with C—H = 0.93 Å, O—H = 0.82 Å, N—H = 0.89 Å, and with Uiso(H) = 1.2 Ueq(C) or 1.5 Ueq(O).
Boronic acid and its derivates have attracted great interest in various areas of materials science, catalysis, surface chemistry, organic synthesis, biochemistry, and luminosity (Hall, 2005). Boronic acid has been utilized to controucted covalent macrocycles compounds and organic frameworks as building block. Intermolecular interactions of boronic acid have now been well explored in the rapid development of organic supramolecular assemblies. A large variety of
have shown the application as new building blocks in crystal engineering through hydrogen-bonding interactions. 4-Carboxyphenylboronic acid was shown to produce second-sphere coordination networks with transition metals (SeethaLekshmi & Pedireddi, 2006). Cocrystallization of trans-1,2-bis(4-pyridyl)ethylene with phenylboronic acid could generate one-dimensional hydrogen bonded infinite ladder (Sokolov & MacGillivray, 2006). In the crystal of 3-aminophenyl boronic acid hydrochloride, each chloride ion is connected four organic ions by N—H···Cl and O—H···Cl hydrogen bonds (Li et al., 1995). Bis[3-(dihydroxyboryl)anilinium] sulfate can provide a complex three-dimensional supramolecular network by hydrogen bonds (Vega et al., 2010).Here, we present the title compound - an organic salt of 3-(dihydroxyboryl)anilinium and 6-carboxypyridine-2-carboxylate (Fig. 1). In the crystal, intermolecular O—H···O, N—H···O and N—H···N interactions (Table 1) generate hydrogen-bonding network, which link cations and anions into three-dimensional structure.
For general background, see: Hall (2005). For related structures, see: Li et al. (1995); SeethaLekshmi & Pedireddi (2006); Sokolov & MacGillivray (2006); Vega et al. (2010).
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: Mercury (Macrae et al., 2006), PLATON (Spek, 2009), SHELXL97 (Sheldrick, 2008) and WinGX (Farrugia, 1999).Fig. 1. The molecular structure of the title compound, with displacement ellipsoids drawn at the 30% probability level. |
C6H9BNO2+·C7H4NO4− | F(000) = 632 |
Mr = 304.06 | Dx = 1.491 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P2yn | Cell parameters from 58 reflections |
a = 7.7065 (6) Å | θ = 2.3–22.7° |
b = 14.0473 (10) Å | µ = 0.12 mm−1 |
c = 13.0852 (10) Å | T = 293 K |
β = 106.963 (1)° | Block, colourless |
V = 1354.92 (18) Å3 | 0.28 × 0.25 × 0.20 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 2677 independent reflections |
Radiation source: fine-focus sealed tube | 2260 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.018 |
φ and ω scans | θmax = 26.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −9→8 |
Tmin = 0.958, Tmax = 0.989 | k = −17→17 |
8330 measured reflections | l = −16→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.102 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0541P)2 + 0.416P] where P = (Fo2 + 2Fc2)/3 |
2677 reflections | (Δ/σ)max < 0.001 |
206 parameters | Δρmax = 0.25 e Å−3 |
1 restraint | Δρmin = −0.20 e Å−3 |
C6H9BNO2+·C7H4NO4− | V = 1354.92 (18) Å3 |
Mr = 304.06 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.7065 (6) Å | µ = 0.12 mm−1 |
b = 14.0473 (10) Å | T = 293 K |
c = 13.0852 (10) Å | 0.28 × 0.25 × 0.20 mm |
β = 106.963 (1)° |
Bruker SMART CCD area-detector diffractometer | 2677 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 2260 reflections with I > 2σ(I) |
Tmin = 0.958, Tmax = 0.989 | Rint = 0.018 |
8330 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | 1 restraint |
wR(F2) = 0.102 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.25 e Å−3 |
2677 reflections | Δρmin = −0.20 e Å−3 |
206 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O2 | 0.99515 (15) | 0.89532 (8) | 0.27933 (8) | 0.0301 (3) | |
B1 | 0.1026 (2) | 0.91402 (12) | −0.06619 (13) | 0.0257 (4) | |
C1 | 1.19186 (19) | 0.93213 (10) | 0.45205 (11) | 0.0227 (3) | |
C2 | 1.1728 (2) | 1.02978 (11) | 0.43673 (12) | 0.0300 (4) | |
H2 | 1.0986 | 1.0544 | 0.3729 | 0.036* | |
C3 | 1.2659 (2) | 1.08965 (11) | 0.51780 (14) | 0.0363 (4) | |
H3 | 1.2534 | 1.1553 | 0.5101 | 0.044* | |
C4 | 1.3776 (2) | 1.05063 (11) | 0.61038 (13) | 0.0319 (4) | |
H4 | 1.4459 | 1.0894 | 0.6650 | 0.038* | |
C5 | 1.38602 (19) | 0.95208 (10) | 0.62036 (12) | 0.0248 (3) | |
C6 | 1.5061 (2) | 0.90725 (10) | 0.72088 (12) | 0.0266 (3) | |
C7 | 1.09722 (19) | 0.86419 (10) | 0.36402 (11) | 0.0233 (3) | |
C8 | 0.57150 (19) | 0.81556 (10) | 0.09336 (11) | 0.0212 (3) | |
C9 | 0.5358 (2) | 0.76762 (10) | 0.17760 (12) | 0.0246 (3) | |
H9 | 0.6274 | 0.7350 | 0.2274 | 0.030* | |
C10 | 0.3611 (2) | 0.76933 (11) | 0.18593 (12) | 0.0280 (3) | |
H10 | 0.3345 | 0.7388 | 0.2426 | 0.034* | |
C11 | 0.2256 (2) | 0.81672 (11) | 0.10949 (12) | 0.0273 (3) | |
H11 | 0.1085 | 0.8168 | 0.1157 | 0.033* | |
C12 | 0.2593 (2) | 0.86417 (10) | 0.02364 (12) | 0.0241 (3) | |
C13 | 0.43773 (19) | 0.86366 (10) | 0.01759 (11) | 0.0230 (3) | |
H13 | 0.4662 | 0.8958 | −0.0376 | 0.028* | |
H1A | 1.070 (4) | 0.7337 (19) | 0.329 (2) | 0.103 (10)* | |
N1 | 1.29358 (16) | 0.89300 (8) | 0.54318 (9) | 0.0222 (3) | |
N2 | 0.75722 (16) | 0.81145 (8) | 0.08587 (10) | 0.0230 (3) | |
H2A | 0.7832 | 0.7520 | 0.0719 | 0.034* | |
H2B | 0.8341 | 0.8302 | 0.1475 | 0.034* | |
H2C | 0.7673 | 0.8497 | 0.0337 | 0.034* | |
O1 | 1.13249 (15) | 0.77632 (8) | 0.38493 (8) | 0.0309 (3) | |
O3 | 1.46409 (15) | 0.82127 (8) | 0.73569 (9) | 0.0334 (3) | |
O4 | 1.63185 (16) | 0.95337 (9) | 0.77863 (10) | 0.0424 (3) | |
O5 | 0.15502 (15) | 0.96244 (9) | −0.14174 (9) | 0.0371 (3) | |
H5 | 0.0661 | 0.9872 | −0.1837 | 0.056* | |
O6 | −0.07164 (14) | 0.90249 (8) | −0.06323 (8) | 0.0312 (3) | |
H6 | −0.1416 | 0.9245 | −0.1178 | 0.047* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O2 | 0.0322 (6) | 0.0294 (6) | 0.0216 (5) | 0.0028 (4) | −0.0035 (5) | 0.0030 (4) |
B1 | 0.0264 (9) | 0.0232 (8) | 0.0244 (9) | 0.0018 (7) | 0.0023 (7) | −0.0019 (6) |
C1 | 0.0208 (7) | 0.0259 (7) | 0.0204 (7) | −0.0005 (6) | 0.0045 (6) | 0.0007 (6) |
C2 | 0.0350 (9) | 0.0271 (8) | 0.0235 (8) | 0.0021 (6) | 0.0016 (7) | 0.0039 (6) |
C3 | 0.0485 (10) | 0.0207 (7) | 0.0351 (9) | 0.0004 (7) | 0.0050 (8) | 0.0015 (7) |
C4 | 0.0376 (9) | 0.0249 (8) | 0.0277 (8) | −0.0041 (7) | 0.0008 (7) | −0.0043 (6) |
C5 | 0.0222 (7) | 0.0256 (7) | 0.0242 (8) | −0.0002 (6) | 0.0030 (6) | −0.0014 (6) |
C6 | 0.0263 (8) | 0.0265 (8) | 0.0231 (8) | 0.0017 (6) | 0.0014 (6) | −0.0030 (6) |
C7 | 0.0227 (7) | 0.0261 (7) | 0.0203 (7) | 0.0012 (6) | 0.0050 (6) | 0.0022 (6) |
C8 | 0.0190 (7) | 0.0210 (7) | 0.0220 (7) | −0.0012 (5) | 0.0033 (5) | −0.0029 (5) |
C9 | 0.0237 (7) | 0.0250 (7) | 0.0216 (7) | 0.0014 (6) | 0.0012 (6) | 0.0013 (6) |
C10 | 0.0287 (8) | 0.0318 (8) | 0.0237 (8) | −0.0001 (6) | 0.0080 (6) | 0.0043 (6) |
C11 | 0.0201 (7) | 0.0328 (8) | 0.0290 (8) | 0.0016 (6) | 0.0071 (6) | −0.0001 (6) |
C12 | 0.0237 (8) | 0.0217 (7) | 0.0245 (8) | 0.0009 (6) | 0.0033 (6) | −0.0025 (6) |
C13 | 0.0247 (8) | 0.0225 (7) | 0.0208 (7) | −0.0001 (6) | 0.0051 (6) | 0.0013 (5) |
N1 | 0.0193 (6) | 0.0241 (6) | 0.0209 (6) | −0.0004 (5) | 0.0024 (5) | −0.0007 (5) |
N2 | 0.0203 (6) | 0.0241 (6) | 0.0223 (6) | 0.0000 (5) | 0.0026 (5) | −0.0001 (5) |
O1 | 0.0382 (7) | 0.0241 (5) | 0.0228 (6) | 0.0001 (5) | −0.0031 (5) | 0.0002 (4) |
O3 | 0.0369 (7) | 0.0280 (6) | 0.0261 (6) | −0.0019 (5) | −0.0052 (5) | 0.0029 (4) |
O4 | 0.0396 (7) | 0.0342 (6) | 0.0369 (7) | −0.0055 (5) | −0.0145 (5) | −0.0009 (5) |
O5 | 0.0291 (6) | 0.0446 (7) | 0.0344 (7) | 0.0090 (5) | 0.0042 (5) | 0.0160 (5) |
O6 | 0.0234 (6) | 0.0377 (6) | 0.0270 (6) | 0.0021 (5) | −0.0010 (4) | 0.0063 (5) |
O2—C7 | 1.2367 (17) | C8—C13 | 1.381 (2) |
B1—O5 | 1.355 (2) | C8—C9 | 1.386 (2) |
B1—O6 | 1.365 (2) | C8—N2 | 1.4640 (18) |
B1—C12 | 1.582 (2) | C9—C10 | 1.382 (2) |
C1—N1 | 1.3391 (18) | C9—H9 | 0.9300 |
C1—C2 | 1.388 (2) | C10—C11 | 1.387 (2) |
C1—C7 | 1.510 (2) | C10—H10 | 0.9300 |
C2—C3 | 1.380 (2) | C11—C12 | 1.394 (2) |
C2—H2 | 0.9300 | C11—H11 | 0.9300 |
C3—C4 | 1.379 (2) | C12—C13 | 1.400 (2) |
C3—H3 | 0.9300 | C13—H13 | 0.9300 |
C4—C5 | 1.390 (2) | N2—H2A | 0.8900 |
C4—H4 | 0.9300 | N2—H2B | 0.8900 |
C5—N1 | 1.3403 (19) | N2—H2C | 0.8900 |
C5—C6 | 1.507 (2) | O1—H1A | 0.963 (18) |
C6—O4 | 1.2260 (19) | O5—H5 | 0.8200 |
C6—O3 | 1.2796 (19) | O6—H6 | 0.8200 |
C7—O1 | 1.2763 (18) | ||
O5—B1—O6 | 125.84 (14) | C9—C8—N2 | 117.31 (12) |
O5—B1—C12 | 116.05 (14) | C10—C9—C8 | 118.56 (14) |
O6—B1—C12 | 118.08 (13) | C10—C9—H9 | 120.7 |
N1—C1—C2 | 122.97 (13) | C8—C9—H9 | 120.7 |
N1—C1—C7 | 116.54 (12) | C9—C10—C11 | 119.81 (14) |
C2—C1—C7 | 120.48 (13) | C9—C10—H10 | 120.1 |
C3—C2—C1 | 118.82 (14) | C11—C10—H10 | 120.1 |
C3—C2—H2 | 120.6 | C10—C11—C12 | 122.15 (14) |
C1—C2—H2 | 120.6 | C10—C11—H11 | 118.9 |
C4—C3—C2 | 118.99 (14) | C12—C11—H11 | 118.9 |
C4—C3—H3 | 120.5 | C11—C12—C13 | 117.39 (13) |
C2—C3—H3 | 120.5 | C11—C12—B1 | 121.94 (13) |
C3—C4—C5 | 118.59 (14) | C13—C12—B1 | 120.64 (13) |
C3—C4—H4 | 120.7 | C8—C13—C12 | 120.12 (13) |
C5—C4—H4 | 120.7 | C8—C13—H13 | 119.9 |
N1—C5—C4 | 123.08 (14) | C12—C13—H13 | 119.9 |
N1—C5—C6 | 117.05 (13) | C1—N1—C5 | 117.46 (12) |
C4—C5—C6 | 119.86 (13) | C8—N2—H2A | 109.5 |
O4—C6—O3 | 126.49 (14) | C8—N2—H2B | 109.5 |
O4—C6—C5 | 119.39 (14) | H2A—N2—H2B | 109.5 |
O3—C6—C5 | 114.12 (13) | C8—N2—H2C | 109.5 |
O2—C7—O1 | 125.03 (14) | H2A—N2—H2C | 109.5 |
O2—C7—C1 | 119.97 (13) | H2B—N2—H2C | 109.5 |
O1—C7—C1 | 114.99 (12) | C7—O1—H1A | 114.1 (18) |
C13—C8—C9 | 121.94 (13) | B1—O5—H5 | 109.5 |
C13—C8—N2 | 120.73 (13) | B1—O6—H6 | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O3i | 0.96 (2) | 1.47 (3) | 2.429 (2) | 173 (2) |
N2—H2A···O1i | 0.89 | 2.42 | 2.808 (2) | 107 |
N2—H2A···O3i | 0.89 | 2.42 | 2.835 (2) | 109 |
N2—H2A···N1i | 0.89 | 2.08 | 2.955 (2) | 169 |
N2—H2B···O3i | 0.89 | 2.49 | 2.835 (2) | 104 |
N2—H2B···O2 | 0.89 | 2.03 | 2.907 (2) | 170 |
N2—H2C···O6ii | 0.89 | 2.15 | 2.947 (2) | 149 |
O5—H5···O2iii | 0.82 | 2.04 | 2.712 (2) | 139 |
O6—H6···O4iv | 0.82 | 1.91 | 2.694 (2) | 158 |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x+1, y, z; (iii) −x+1, −y+2, −z; (iv) x−2, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | C6H9BNO2+·C7H4NO4− |
Mr | 304.06 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 7.7065 (6), 14.0473 (10), 13.0852 (10) |
β (°) | 106.963 (1) |
V (Å3) | 1354.92 (18) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.28 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.958, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8330, 2677, 2260 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.102, 1.05 |
No. of reflections | 2677 |
No. of parameters | 206 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.25, −0.20 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), Mercury (Macrae et al., 2006), PLATON (Spek, 2009), SHELXL97 (Sheldrick, 2008) and WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O3i | 0.96 (2) | 1.47 (3) | 2.429 (2) | 173 (2) |
N2—H2A···O1i | 0.89 | 2.42 | 2.808 (2) | 107 |
N2—H2A···O3i | 0.89 | 2.42 | 2.835 (2) | 109 |
N2—H2A···N1i | 0.89 | 2.08 | 2.955 (2) | 169 |
N2—H2B···O3i | 0.89 | 2.49 | 2.835 (2) | 104 |
N2—H2B···O2 | 0.89 | 2.03 | 2.907 (2) | 170 |
N2—H2C···O6ii | 0.89 | 2.15 | 2.947 (2) | 149 |
O5—H5···O2iii | 0.82 | 2.04 | 2.712 (2) | 139 |
O6—H6···O4iv | 0.82 | 1.91 | 2.694 (2) | 158 |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x+1, y, z; (iii) −x+1, −y+2, −z; (iv) x−2, y, z−1. |
Acknowledgements
This work was supported by the Liaoning Provincial Science and Technology Foundation of China and the Foundation of the 211 Project for Innovative Talents Training, Liaoning University.
References
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Boronic acid and its derivates have attracted great interest in various areas of materials science, catalysis, surface chemistry, organic synthesis, biochemistry, and luminosity (Hall, 2005). Boronic acid has been utilized to controucted covalent macrocycles compounds and organic frameworks as building block. Intermolecular interactions of boronic acid have now been well explored in the rapid development of organic supramolecular assemblies. A large variety of boronic acids have shown the application as new building blocks in crystal engineering through hydrogen-bonding interactions. 4-Carboxyphenylboronic acid was shown to produce second-sphere coordination networks with transition metals (SeethaLekshmi & Pedireddi, 2006). Cocrystallization of trans-1,2-bis(4-pyridyl)ethylene with phenylboronic acid could generate one-dimensional hydrogen bonded infinite ladder (Sokolov & MacGillivray, 2006). In the crystal of 3-aminophenyl boronic acid hydrochloride, each chloride ion is connected four organic ions by N—H···Cl and O—H···Cl hydrogen bonds (Li et al., 1995). Bis[3-(dihydroxyboryl)anilinium] sulfate can provide a complex three-dimensional supramolecular network by hydrogen bonds (Vega et al., 2010).
Here, we present the title compound - an organic salt of 3-(dihydroxyboryl)anilinium and 6-carboxypyridine-2-carboxylate (Fig. 1). In the crystal, intermolecular O—H···O, N—H···O and N—H···N interactions (Table 1) generate hydrogen-bonding network, which link cations and anions into three-dimensional structure.