metal-organic compounds
Di-μ-acetato-κ4O:O-bis({N′-[(E)-phenyl(pyridin-2-yl-κN)methylidene]benzohydrazidato-κ2N′,O}copper(II))
aDepartment of Applied Chemistry, Cochin University of Science and Technology, Kochi 682 022, India, and bDepartment of Chemistry, Faculty of Science, Eastern University, Sri Lanka, Chenkalady, Sri Lanka
*Correspondence e-mail: eesans@yahoo.com
The binuclear molecule of the title compound, [Cu2(C19H14N3O)2(CH3COO)2], resides on a crystallographic inversion centre. It has an E conformation with respect to the azomethine double bond and a Z conformation about the amide C=N bond. The CuII atom has a slightly distorted square-pyramidal coordination geometry. The crystal packing involves intermolecular C—H⋯O, C—H⋯N and C—H⋯π and two types of π–π interactions, with centroid–centroid distances of 3.9958 (10) and 3.7016 (13) Å.
Related literature
For the applications of benzohydrazide compounds, see: El-Sayed et al. (2011); Bakir & Brown (2002). For similar structures, see: Mangalam & Kurup (2011). For the synthesis of related compounds, see: Mangalam et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2010); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536812031467/fj2577sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812031467/fj2577Isup2.hkl
The title complex was prepared by adapting a reported procedure (Mangalam et al., 2010) by refluxing a mixture of methanolic solutions of N'-[(E)-phenyl(pyridin-2-yl)methylidene]benzohydrazide (0.301 g, 1 mmol) and Cu(OAc)2.H2O (0.199 g, 1 mmol) for three hours. After two days, green colored crystals were collected, washed with few drops of methanol and dried over P4O10 in vacuo. Single crystals of the title complex suitable for X-ray analysis were obtained after two days from the mother liquor by slow evaporation.
All H atoms on C were placed in calculated positions, guided by difference maps, with C—H bond distance of 0.93–0.96 Å. H atoms were assigned as Uiso=1.2Ueq (1.5 for Me).
Derivatives of benzohydrazides and their metal complexes possess pronounced biological activities. They also have versatile binding properties and show inhibitory activity against ovine COX-2 (El-Sayed et al., 2011). Derivatives of benzohydrazides and their metal complexes have received considerable attention during the last decade because of their versatile applications in nonlinear optics and molecular sensing (Bakir & Brown, 2002).The present report is an extension of our earlier studies in this area (Mangalam & Kurup, 2011).
The compound crystallizes in monoclinic
P21/n. The labeled diagrams of the and the dimeric molecule are shown in Figs. 1 and 2 respectively. This molecule adopts an E configuration with respect to C6—N2 bond and it exists in enolate form with C13—O1 bond length of 1.276 (2) Å which is very close to a formal C—O bond length [1.31 Å]. The dihedral angle between pyridine and the phenyl (comprising atoms C14—C19) rings is 4.78 (11)°. O1 and N2 are in Z configuration with respect to C13—N3 bond having a torsional angle of 1.6 (3)°.A non-conventional intermolecular hydrogen bond (Fig. 3) is present in the molecular system between the H atoms attached to the C8, C15 atoms and O1, O2 aoms of another molecule with D···A distances of 3.416 (2) and 3.116 (3) Å respectively (Table 1). Moreover, there are C–H···π interactions between the H atoms attached at the C1, C3, C12 and C21 atoms and the corresponding aromatic and metal chelate rings of the same or another molecule (Fig. 4) with the minimum distance of 3.170 (2) Å between the carbon atoms and the corresponding rings involving interactions. There are two types of π–π interactions within the dimeric molecule (T-shaped arrangement) and also between the adjacent molecules (slipped arrangement) with the centroid-centroid distances of 3.9958 (10) and 3.7016 (13) Å respectively between the rings involving interactions as shown in Fig. 5.
Packing of molecules (Fig. 6) is predominantly favored by two types of non-classical intermolecular hydrogen bonding and C–H···π interactions involving the H atoms from C3 and C12 atoms and a π–π interaction between the adjacent molecules in slipped arrangement.
For the applications of benzohydrazide compounds, see: El-Sayed et al. (2011); Bakir & Brown (2002). For similar structures, see: Mangalam & Kurup (2011). For the synthesis of related compounds, see: Mangalam et al. (2010).
Data collection: APEX2 (Bruker, 2004); cell
APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2010); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).Fig. 1. ORTEP view of the unique part of the Cu complex, drawn with 50% probability displacement ellipsoids for the non-H atoms. | |
Fig. 2. Molecular structure of the title compound. | |
Fig. 3. Hydrogen-bonding interactions showing an infinite chain in the crystal structure of [Cu2N6O6C42H34]. | |
Fig. 4. C—H···π interactions found in the title compound. | |
Fig. 5. π–π interactions present in the crystal structure of [Cu2N6O6C42H34]. | |
Fig. 6. Packing diagram of the compound [Cu2N6O6C42H34] along a axis. |
[Cu2(C19H14N3O)2(C2H3O2)2] | F(000) = 868.0 |
Mr = 845.85 | Dx = 1.498 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 9946 reflections |
a = 9.5758 (3) Å | θ = 2.7–28.3° |
b = 13.1009 (4) Å | µ = 1.19 mm−1 |
c = 15.2124 (5) Å | T = 296 K |
β = 100.718 (1)° | Block, green |
V = 1875.13 (10) Å3 | 0.35 × 0.25 × 0.20 mm |
Z = 2 |
Bruker Kappa APEXII CCD diffractometer | 3300 independent reflections |
Radiation source: fine-focus sealed tube | 2981 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
ω and φ scan | θmax = 25.0°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −11→11 |
Tmin = 0.706, Tmax = 0.788 | k = −15→14 |
14426 measured reflections | l = −18→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.079 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0437P)2 + 0.9597P] where P = (Fo2 + 2Fc2)/3 |
3300 reflections | (Δ/σ)max = 0.001 |
254 parameters | Δρmax = 0.42 e Å−3 |
0 restraints | Δρmin = −0.34 e Å−3 |
[Cu2(C19H14N3O)2(C2H3O2)2] | V = 1875.13 (10) Å3 |
Mr = 845.85 | Z = 2 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.5758 (3) Å | µ = 1.19 mm−1 |
b = 13.1009 (4) Å | T = 296 K |
c = 15.2124 (5) Å | 0.35 × 0.25 × 0.20 mm |
β = 100.718 (1)° |
Bruker Kappa APEXII CCD diffractometer | 3300 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 2981 reflections with I > 2σ(I) |
Tmin = 0.706, Tmax = 0.788 | Rint = 0.022 |
14426 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 0 restraints |
wR(F2) = 0.079 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.42 e Å−3 |
3300 reflections | Δρmin = −0.34 e Å−3 |
254 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu1 | 0.83940 (2) | 0.033872 (17) | 0.018513 (14) | 0.03149 (10) | |
O1 | 0.72812 (15) | −0.09187 (11) | −0.01867 (9) | 0.0371 (3) | |
O2 | 0.7660 (2) | 0.1008 (2) | −0.17172 (15) | 0.1028 (9) | |
N1 | 0.90507 (17) | 0.16141 (13) | 0.08915 (11) | 0.0357 (4) | |
N2 | 0.71446 (17) | 0.03165 (11) | 0.10470 (11) | 0.0308 (3) | |
N3 | 0.62458 (18) | −0.04952 (12) | 0.10243 (11) | 0.0345 (4) | |
O3 | 0.95034 (15) | 0.05070 (11) | −0.07436 (9) | 0.0379 (3) | |
C1 | 1.0076 (2) | 0.22526 (17) | 0.07683 (15) | 0.0463 (5) | |
H1 | 1.0587 | 0.2115 | 0.0318 | 0.056* | |
C2 | 1.0406 (3) | 0.31125 (19) | 0.12869 (17) | 0.0547 (6) | |
H2 | 1.1134 | 0.3544 | 0.1191 | 0.066* | |
C3 | 0.9649 (3) | 0.33231 (18) | 0.19451 (16) | 0.0524 (6) | |
H3 | 0.9848 | 0.3905 | 0.2296 | 0.063* | |
C4 | 0.8588 (2) | 0.26633 (16) | 0.20825 (14) | 0.0428 (5) | |
H4 | 0.8061 | 0.2797 | 0.2525 | 0.051* | |
C5 | 0.8318 (2) | 0.18018 (15) | 0.15558 (12) | 0.0334 (4) | |
C6 | 0.7253 (2) | 0.10156 (14) | 0.16553 (12) | 0.0312 (4) | |
C7 | 0.6441 (2) | 0.10292 (14) | 0.23916 (12) | 0.0322 (4) | |
C8 | 0.4970 (2) | 0.09464 (15) | 0.22120 (13) | 0.0370 (4) | |
H8 | 0.4489 | 0.0884 | 0.1625 | 0.044* | |
C9 | 0.4224 (2) | 0.09563 (18) | 0.29038 (15) | 0.0476 (5) | |
H9 | 0.3237 | 0.0916 | 0.2779 | 0.057* | |
C10 | 0.4924 (3) | 0.1025 (2) | 0.37747 (16) | 0.0533 (6) | |
H10 | 0.4415 | 0.1025 | 0.4239 | 0.064* | |
C11 | 0.6387 (3) | 0.1093 (2) | 0.39599 (14) | 0.0519 (6) | |
H11 | 0.6863 | 0.1132 | 0.4550 | 0.062* | |
C12 | 0.7147 (2) | 0.11039 (18) | 0.32757 (14) | 0.0428 (5) | |
H12 | 0.8132 | 0.1161 | 0.3404 | 0.051* | |
C13 | 0.6408 (2) | −0.10829 (15) | 0.03375 (12) | 0.0323 (4) | |
C14 | 0.5487 (2) | −0.20007 (15) | 0.01984 (13) | 0.0346 (4) | |
C15 | 0.4417 (2) | −0.21282 (19) | 0.06900 (15) | 0.0476 (5) | |
H15 | 0.4269 | −0.1630 | 0.1098 | 0.057* | |
C16 | 0.3573 (3) | −0.2982 (2) | 0.05801 (19) | 0.0638 (7) | |
H16 | 0.2863 | −0.3062 | 0.0916 | 0.077* | |
C17 | 0.3777 (3) | −0.3715 (2) | −0.00235 (19) | 0.0698 (8) | |
H17 | 0.3210 | −0.4296 | −0.0095 | 0.084* | |
C18 | 0.4814 (3) | −0.3593 (2) | −0.05222 (17) | 0.0637 (7) | |
H18 | 0.4942 | −0.4090 | −0.0936 | 0.076* | |
C19 | 0.5674 (3) | −0.27385 (17) | −0.04190 (14) | 0.0463 (5) | |
H19 | 0.6374 | −0.2660 | −0.0763 | 0.056* | |
C20 | 0.8914 (2) | 0.08509 (18) | −0.15067 (14) | 0.0455 (5) | |
C21 | 0.9882 (4) | 0.1050 (3) | −0.2152 (2) | 0.0952 (13) | |
H21A | 1.0058 | 0.0423 | −0.2439 | 0.143* | |
H21B | 1.0764 | 0.1323 | −0.1836 | 0.143* | |
H21C | 0.9445 | 0.1531 | −0.2594 | 0.143* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.03334 (16) | 0.03564 (16) | 0.02741 (15) | −0.00451 (9) | 0.01064 (10) | −0.00404 (9) |
O1 | 0.0369 (8) | 0.0436 (8) | 0.0331 (7) | −0.0076 (6) | 0.0121 (6) | −0.0094 (6) |
O2 | 0.0589 (13) | 0.175 (3) | 0.0736 (14) | 0.0407 (15) | 0.0096 (11) | 0.0382 (16) |
N1 | 0.0380 (9) | 0.0349 (9) | 0.0361 (9) | −0.0038 (7) | 0.0123 (7) | −0.0028 (7) |
N2 | 0.0294 (8) | 0.0340 (9) | 0.0298 (8) | −0.0039 (6) | 0.0076 (6) | −0.0032 (6) |
N3 | 0.0346 (9) | 0.0362 (9) | 0.0342 (9) | −0.0071 (7) | 0.0103 (7) | −0.0055 (7) |
O3 | 0.0364 (8) | 0.0505 (8) | 0.0283 (7) | −0.0005 (6) | 0.0098 (6) | 0.0041 (6) |
C1 | 0.0494 (13) | 0.0432 (12) | 0.0513 (13) | −0.0107 (10) | 0.0222 (10) | −0.0059 (10) |
C2 | 0.0600 (15) | 0.0459 (13) | 0.0623 (15) | −0.0207 (11) | 0.0217 (12) | −0.0094 (11) |
C3 | 0.0677 (16) | 0.0393 (12) | 0.0511 (13) | −0.0145 (11) | 0.0137 (12) | −0.0130 (10) |
C4 | 0.0517 (13) | 0.0404 (11) | 0.0385 (11) | −0.0031 (10) | 0.0140 (9) | −0.0087 (9) |
C5 | 0.0363 (10) | 0.0333 (10) | 0.0309 (9) | 0.0010 (8) | 0.0067 (8) | −0.0010 (8) |
C6 | 0.0322 (10) | 0.0334 (10) | 0.0284 (9) | 0.0017 (8) | 0.0066 (7) | −0.0019 (8) |
C7 | 0.0369 (10) | 0.0311 (10) | 0.0297 (9) | 0.0013 (8) | 0.0090 (8) | −0.0020 (8) |
C8 | 0.0366 (10) | 0.0388 (11) | 0.0355 (10) | 0.0026 (8) | 0.0062 (8) | −0.0025 (8) |
C9 | 0.0370 (11) | 0.0556 (14) | 0.0529 (13) | 0.0042 (10) | 0.0156 (10) | −0.0066 (11) |
C10 | 0.0554 (14) | 0.0681 (16) | 0.0430 (12) | 0.0039 (12) | 0.0265 (11) | −0.0073 (11) |
C11 | 0.0568 (14) | 0.0702 (16) | 0.0288 (10) | 0.0038 (12) | 0.0082 (10) | −0.0053 (10) |
C12 | 0.0365 (11) | 0.0575 (13) | 0.0344 (11) | 0.0018 (10) | 0.0066 (9) | −0.0043 (10) |
C13 | 0.0298 (9) | 0.0375 (10) | 0.0284 (9) | −0.0009 (8) | 0.0021 (7) | −0.0005 (8) |
C14 | 0.0340 (10) | 0.0360 (10) | 0.0312 (9) | −0.0028 (8) | −0.0005 (8) | 0.0013 (8) |
C15 | 0.0419 (12) | 0.0531 (13) | 0.0479 (12) | −0.0103 (10) | 0.0087 (10) | −0.0026 (10) |
C16 | 0.0564 (15) | 0.0699 (18) | 0.0658 (17) | −0.0264 (13) | 0.0132 (13) | 0.0007 (14) |
C17 | 0.081 (2) | 0.0578 (16) | 0.0663 (17) | −0.0349 (15) | 0.0025 (15) | 0.0036 (14) |
C18 | 0.094 (2) | 0.0429 (13) | 0.0508 (14) | −0.0153 (13) | 0.0047 (14) | −0.0101 (11) |
C19 | 0.0582 (14) | 0.0409 (12) | 0.0388 (11) | −0.0057 (10) | 0.0062 (10) | −0.0021 (9) |
C20 | 0.0477 (13) | 0.0539 (13) | 0.0363 (11) | 0.0141 (11) | 0.0119 (10) | 0.0058 (10) |
C21 | 0.100 (2) | 0.138 (3) | 0.0595 (18) | 0.051 (2) | 0.0444 (17) | 0.054 (2) |
Cu1—O3 | 1.9318 (14) | C8—C9 | 1.378 (3) |
Cu1—N2 | 1.9325 (16) | C8—H8 | 0.9300 |
Cu1—O1 | 1.9862 (14) | C9—C10 | 1.372 (3) |
Cu1—N1 | 2.0225 (16) | C9—H9 | 0.9300 |
Cu1—O3i | 2.3167 (15) | C10—C11 | 1.379 (3) |
O1—C13 | 1.276 (2) | C10—H10 | 0.9300 |
O2—C20 | 1.202 (3) | C11—C12 | 1.376 (3) |
N1—C1 | 1.330 (3) | C11—H11 | 0.9300 |
N1—C5 | 1.356 (2) | C12—H12 | 0.9300 |
N2—C6 | 1.292 (2) | C13—C14 | 1.483 (3) |
N2—N3 | 1.364 (2) | C14—C19 | 1.382 (3) |
N3—C13 | 1.330 (2) | C14—C15 | 1.386 (3) |
O3—C20 | 1.275 (3) | C15—C16 | 1.371 (3) |
O3—Cu1i | 2.3167 (15) | C15—H15 | 0.9300 |
C1—C2 | 1.378 (3) | C16—C17 | 1.367 (4) |
C1—H1 | 0.9300 | C16—H16 | 0.9300 |
C2—C3 | 1.369 (3) | C17—C18 | 1.366 (4) |
C2—H2 | 0.9300 | C17—H17 | 0.9300 |
C3—C4 | 1.379 (3) | C18—C19 | 1.381 (3) |
C3—H3 | 0.9300 | C18—H18 | 0.9300 |
C4—C5 | 1.381 (3) | C19—H19 | 0.9300 |
C4—H4 | 0.9300 | C20—C21 | 1.492 (3) |
C5—C6 | 1.476 (3) | C21—H21A | 0.9600 |
C6—C7 | 1.478 (3) | C21—H21B | 0.9600 |
C7—C8 | 1.388 (3) | C21—H21C | 0.9600 |
C7—C12 | 1.392 (3) | ||
O3—Cu1—N2 | 172.74 (6) | C7—C8—H8 | 120.0 |
O3—Cu1—O1 | 103.02 (6) | C10—C9—C8 | 120.5 (2) |
N2—Cu1—O1 | 79.26 (6) | C10—C9—H9 | 119.7 |
O3—Cu1—N1 | 97.78 (6) | C8—C9—H9 | 119.7 |
N2—Cu1—N1 | 79.78 (6) | C9—C10—C11 | 119.8 (2) |
O1—Cu1—N1 | 159.04 (6) | C9—C10—H10 | 120.1 |
O3—Cu1—O3i | 76.36 (6) | C11—C10—H10 | 120.1 |
N2—Cu1—O3i | 110.45 (6) | C12—C11—C10 | 120.4 (2) |
O1—Cu1—O3i | 95.24 (6) | C12—C11—H11 | 119.8 |
N1—Cu1—O3i | 92.13 (6) | C10—C11—H11 | 119.8 |
C13—O1—Cu1 | 109.93 (12) | C11—C12—C7 | 120.0 (2) |
C1—N1—C5 | 119.29 (17) | C11—C12—H12 | 120.0 |
C1—N1—Cu1 | 127.57 (14) | C7—C12—H12 | 120.0 |
C5—N1—Cu1 | 113.14 (13) | O1—C13—N3 | 125.39 (18) |
C6—N2—N3 | 122.48 (16) | O1—C13—C14 | 119.27 (17) |
C6—N2—Cu1 | 119.83 (13) | N3—C13—C14 | 115.34 (17) |
N3—N2—Cu1 | 117.50 (12) | C19—C14—C15 | 119.0 (2) |
C13—N3—N2 | 107.80 (15) | C19—C14—C13 | 121.00 (18) |
C20—O3—Cu1 | 119.72 (14) | C15—C14—C13 | 120.04 (18) |
C20—O3—Cu1i | 135.26 (13) | C16—C15—C14 | 120.7 (2) |
Cu1—O3—Cu1i | 103.64 (6) | C16—C15—H15 | 119.7 |
N1—C1—C2 | 122.0 (2) | C14—C15—H15 | 119.7 |
N1—C1—H1 | 119.0 | C17—C16—C15 | 120.0 (3) |
C2—C1—H1 | 119.0 | C17—C16—H16 | 120.0 |
C3—C2—C1 | 119.2 (2) | C15—C16—H16 | 120.0 |
C3—C2—H2 | 120.4 | C18—C17—C16 | 120.0 (2) |
C1—C2—H2 | 120.4 | C18—C17—H17 | 120.0 |
C2—C3—C4 | 119.3 (2) | C16—C17—H17 | 120.0 |
C2—C3—H3 | 120.3 | C17—C18—C19 | 120.8 (2) |
C4—C3—H3 | 120.3 | C17—C18—H18 | 119.6 |
C3—C4—C5 | 119.2 (2) | C19—C18—H18 | 119.6 |
C3—C4—H4 | 120.4 | C18—C19—C14 | 119.6 (2) |
C5—C4—H4 | 120.4 | C18—C19—H19 | 120.2 |
N1—C5—C4 | 120.91 (18) | C14—C19—H19 | 120.2 |
N1—C5—C6 | 114.38 (16) | O2—C20—O3 | 123.7 (2) |
C4—C5—C6 | 124.71 (18) | O2—C20—C21 | 120.5 (2) |
N2—C6—C5 | 112.72 (16) | O3—C20—C21 | 115.9 (2) |
N2—C6—C7 | 124.57 (17) | C20—C21—H21A | 109.5 |
C5—C6—C7 | 122.69 (16) | C20—C21—H21B | 109.5 |
C8—C7—C12 | 119.23 (18) | H21A—C21—H21B | 109.5 |
C8—C7—C6 | 120.52 (17) | C20—C21—H21C | 109.5 |
C12—C7—C6 | 120.24 (18) | H21A—C21—H21C | 109.5 |
C9—C8—C7 | 120.04 (19) | H21B—C21—H21C | 109.5 |
C9—C8—H8 | 120.0 | ||
O3—Cu1—O1—C13 | −175.12 (12) | N3—N2—C6—C7 | 0.1 (3) |
N2—Cu1—O1—C13 | −2.16 (13) | Cu1—N2—C6—C7 | −174.73 (14) |
N1—Cu1—O1—C13 | −2.4 (3) | N1—C5—C6—N2 | −4.3 (2) |
O3i—Cu1—O1—C13 | 107.70 (13) | C4—C5—C6—N2 | 176.11 (19) |
O3—Cu1—N1—C1 | −7.55 (19) | N1—C5—C6—C7 | 174.16 (17) |
N2—Cu1—N1—C1 | 179.4 (2) | C4—C5—C6—C7 | −5.4 (3) |
O1—Cu1—N1—C1 | 179.61 (18) | N2—C6—C7—C8 | −52.9 (3) |
O3i—Cu1—N1—C1 | 68.97 (19) | C5—C6—C7—C8 | 128.8 (2) |
O3—Cu1—N1—C5 | 172.18 (13) | N2—C6—C7—C12 | 125.8 (2) |
N2—Cu1—N1—C5 | −0.90 (13) | C5—C6—C7—C12 | −52.5 (3) |
O1—Cu1—N1—C5 | −0.7 (3) | C12—C7—C8—C9 | 1.1 (3) |
O3i—Cu1—N1—C5 | −111.30 (14) | C6—C7—C8—C9 | 179.77 (19) |
O1—Cu1—N2—C6 | 178.37 (16) | C7—C8—C9—C10 | −1.5 (3) |
N1—Cu1—N2—C6 | −1.72 (15) | C8—C9—C10—C11 | 0.6 (4) |
O3i—Cu1—N2—C6 | 86.73 (15) | C9—C10—C11—C12 | 0.7 (4) |
O1—Cu1—N2—N3 | 3.27 (13) | C10—C11—C12—C7 | −1.0 (4) |
N1—Cu1—N2—N3 | −176.82 (15) | C8—C7—C12—C11 | 0.1 (3) |
O3i—Cu1—N2—N3 | −88.37 (14) | C6—C7—C12—C11 | −178.5 (2) |
C6—N2—N3—C13 | −178.48 (18) | Cu1—O1—C13—N3 | 0.9 (2) |
Cu1—N2—N3—C13 | −3.5 (2) | Cu1—O1—C13—C14 | −178.53 (13) |
O1—Cu1—O3—C20 | 76.25 (17) | N2—N3—C13—O1 | 1.6 (3) |
N1—Cu1—O3—C20 | −101.13 (17) | N2—N3—C13—C14 | −178.92 (15) |
O3i—Cu1—O3—C20 | 168.6 (2) | O1—C13—C14—C19 | 7.6 (3) |
O1—Cu1—O3—Cu1i | −92.32 (6) | N3—C13—C14—C19 | −171.86 (19) |
N1—Cu1—O3—Cu1i | 90.31 (7) | O1—C13—C14—C15 | −172.24 (19) |
O3i—Cu1—O3—Cu1i | 0.0 | N3—C13—C14—C15 | 8.3 (3) |
C5—N1—C1—C2 | −1.1 (3) | C19—C14—C15—C16 | 1.3 (3) |
Cu1—N1—C1—C2 | 178.66 (18) | C13—C14—C15—C16 | −178.8 (2) |
N1—C1—C2—C3 | −0.5 (4) | C14—C15—C16—C17 | −0.5 (4) |
C1—C2—C3—C4 | 0.9 (4) | C15—C16—C17—C18 | −0.5 (5) |
C2—C3—C4—C5 | 0.3 (4) | C16—C17—C18—C19 | 0.6 (4) |
C1—N1—C5—C4 | 2.3 (3) | C17—C18—C19—C14 | 0.3 (4) |
Cu1—N1—C5—C4 | −177.43 (16) | C15—C14—C19—C18 | −1.2 (3) |
C1—N1—C5—C6 | −177.25 (18) | C13—C14—C19—C18 | 178.9 (2) |
Cu1—N1—C5—C6 | 3.0 (2) | Cu1—O3—C20—O2 | −6.1 (4) |
C3—C4—C5—N1 | −2.0 (3) | Cu1i—O3—C20—O2 | 158.0 (2) |
C3—C4—C5—C6 | 177.6 (2) | Cu1—O3—C20—C21 | 174.3 (2) |
N3—N2—C6—C5 | 178.56 (16) | Cu1i—O3—C20—C21 | −21.6 (4) |
Cu1—N2—C6—C5 | 3.7 (2) |
Symmetry code: (i) −x+2, −y, −z. |
Cg2, Cg3, Cg5, Cg8 and Cg9 are the centroids of the Cu1/O1/C13/N3/N2, Cu1/O3/Cu1A/O3A, Cu1/N1/C5/C6/N2, C7–C12 and C14–C19 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15···N3 | 0.93 | 2.43 | 2.752 (3) | 101 |
C8—H8···O1ii | 0.93 | 2.51 | 3.416 (2) | 166 |
C15—H15···O2ii | 0.93 | 2.37 | 3.116 (4) | 137 |
C1—H1···Cg3 | 0.93 | 2.85 | 3.1701 | 102 |
C3—H3···Cg8iii | 0.93 | 2.86 | 3.5543 | 132 |
C12—H12···Cg9iii | 0.93 | 3.12 | 3.8426 | 136 |
C21—H21A···Cg5i | 0.96 | 3.14 | 3.5809 | 110 |
C21—H21B···Cg2i | 0.96 | 2.96 | 3.6761 | 133 |
Symmetry codes: (i) −x+2, −y, −z; (ii) −x+1, −y, −z; (iii) −x+3/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Cu2(C19H14N3O)2(C2H3O2)2] |
Mr | 845.85 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 296 |
a, b, c (Å) | 9.5758 (3), 13.1009 (4), 15.2124 (5) |
β (°) | 100.718 (1) |
V (Å3) | 1875.13 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.19 |
Crystal size (mm) | 0.35 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2004) |
Tmin, Tmax | 0.706, 0.788 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14426, 3300, 2981 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.079, 1.06 |
No. of reflections | 3300 |
No. of parameters | 254 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.42, −0.34 |
Computer programs: APEX2 (Bruker, 2004), APEX2 and SAINT (Bruker, 2004), SAINT and XPREP (Bruker, 2004), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2010), SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).
Cg2, Cg3, Cg5, Cg8 and Cg9 are the centroids of the Cu1/O1/C13/N3/N2, Cu1/O3/Cu1A/O3A, Cu1/N1/C5/C6/N2, C7–C12 and C14–C19 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15···N3 | 0.93 | 2.43 | 2.752 (3) | 101 |
C8—H8···O1i | 0.93 | 2.51 | 3.416 (2) | 166 |
C15—H15···O2i | 0.93 | 2.37 | 3.116 (4) | 137 |
C1—H1···Cg3 | 0.93 | 2.8502 | 3.1701 | 102 |
C3—H3···Cg8ii | 0.93 | 2.8644 | 3.5543 | 132 |
C12—H12···Cg9ii | 0.93 | 3.1173 | 3.8426 | 136 |
C21—H21A···Cg5iii | 0.96 | 3.1370 | 3.5809 | 110 |
C21—H21B···Cg2iii | 0.96 | 2.9569 | 3.6761 | 133 |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x+3/2, y+1/2, −z+1/2; (iii) −x+2, −y, −z. |
Acknowledgements
The authors thank the Sophisticated Analytical Instument Facility, Cochin University of Science and Technology, Kochi-22, for providing single-crystal XRD data. MCV and JMJ thank the Council of Scientific and Industrial Research, New Delhi, India, for awarding a Junior Research Fellowship and Senior Research Fellowship, respectively.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Derivatives of benzohydrazides and their metal complexes possess pronounced biological activities. They also have versatile binding properties and show inhibitory activity against ovine COX-2 (El-Sayed et al., 2011). Derivatives of benzohydrazides and their metal complexes have received considerable attention during the last decade because of their versatile applications in nonlinear optics and molecular sensing (Bakir & Brown, 2002).The present report is an extension of our earlier studies in this area (Mangalam & Kurup, 2011).
The compound crystallizes in monoclinic space group P21/n. The labeled diagrams of the asymmetric unit and the dimeric molecule are shown in Figs. 1 and 2 respectively. This molecule adopts an E configuration with respect to C6—N2 bond and it exists in enolate form with C13—O1 bond length of 1.276 (2) Å which is very close to a formal C—O bond length [1.31 Å]. The dihedral angle between pyridine and the phenyl (comprising atoms C14—C19) rings is 4.78 (11)°. O1 and N2 are in Z configuration with respect to C13—N3 bond having a torsional angle of 1.6 (3)°.
A non-conventional intermolecular hydrogen bond (Fig. 3) is present in the molecular system between the H atoms attached to the C8, C15 atoms and O1, O2 aoms of another molecule with D···A distances of 3.416 (2) and 3.116 (3) Å respectively (Table 1). Moreover, there are C–H···π interactions between the H atoms attached at the C1, C3, C12 and C21 atoms and the corresponding aromatic and metal chelate rings of the same or another molecule (Fig. 4) with the minimum distance of 3.170 (2) Å between the carbon atoms and the corresponding rings involving interactions. There are two types of π–π interactions within the dimeric molecule (T-shaped arrangement) and also between the adjacent molecules (slipped arrangement) with the centroid-centroid distances of 3.9958 (10) and 3.7016 (13) Å respectively between the rings involving interactions as shown in Fig. 5.
Packing of molecules (Fig. 6) is predominantly favored by two types of non-classical intermolecular hydrogen bonding and C–H···π interactions involving the H atoms from C3 and C12 atoms and a π–π interaction between the adjacent molecules in slipped arrangement.