organic compounds
1-[(3-Benzyloxy-2-nitrophenoxy)methyl]benzene
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bChemistry Department, Manipal Institute of Technology, Manipal, India, cDepartment of Printing, Manipal Institute of Technology, Manipal 576 104, India, and dDepartment of Chemistry, National Institute of Technology-Karnataka, Surathkal, Mangalore 575 025, India
*Correspondence e-mail: hkfun@usm.my
The 20H17NO4, consists of two crystallographically independent molecules. In one of the molecules, the central benzene ring forms dihedral angles of 2.26 (6) and 58.68 (6)° with the terminal benzene rings and the dihedral angle between the terminal benzene rings is 56.45 (6)°. The corresponding values for the other molecule are 35.17 (6), 70.97 (6) and 69.62 (6)°, respectively. In the crystal, an inversion dimer linked by a pair of C—H⋯O hydrogen bonds occurs for one of the unique molecules. C—H⋯π and π–π [centroid–centroid distances = 3.7113 (8) and 3.7216 (7) Å] interactions link the components into a three-dimensional network.
of the title compound, CRelated literature
For background to 1-((3-(benzyloxy)-2-nitrophenoxy)methyl)benzene derivatives, see: Altmann et al. (2004); Ohkubo et al. (1997). For related structures, see: Naveenkumar et al. (2009); Fun et al. (2011); Ren & Wang (2012). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536812029194/hb6876sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812029194/hb6876Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812029194/hb6876Isup3.cml
To a stirred solution of 3-(benzyloxy)-2-nitrophenol (1 g, 0.006 mol) in acetonitrile (20 ml) was added potassium carbonate (0.89 g, 0.006 mol) benzyl bromide (1.1 g, 0.006 mol) drop-wise at 273 K. The reaction mixture was stirred at room temperature for 2 h.
of crude reaction mixture confirms the completion of the reaction. The reaction mixture was concentrated and the residue was purified by to get title compound, which was recrystallized using acetone to get orange plates. Yield: 55%, M.p. 351–353 K.All the H atoms were positioned geometrically [C–H = 0.95 or 0.99 Å] and refined using a riding model with Uiso(H) = 1.2 Ueq(C). Three outliers were omitted (-1 1 0, -4 2 0 and 2 - 6 9) in the final refinement.
1-((3-(Benzyloxy)-2-nitrophenoxy)methyl)benzene derivatives are extensively used in Medicinal Chemistry as important intermediates for many pharmaceutical products (Altmann et al., 2004). 3-(Benzyloxy)-2-nitrophenol is used as intermediate for the synthesis of anticancer products and many natural products as well (Ohkubo et al., 1997). As part of our studies in this area, we hereby report the
of the title compound.The
of the title compound (Fig. 1), consists of two crystallographically independent molecules, A and B. Bond lengths and angles are within normal ranges (Naveenkumar et al., 2009; Fun et al., 2011; Ren & Wang, 2012). In molecule A, the central benzene ring (C8A–C13A) forms dihedral angles of 2.26 (6) and 58.68 (6)°, respectively, with the terminal benzene rings (C1A–C6A & C15A–C20A). The dihedral angle between the terminal benzene rings is 56.45 (6)°. The corresponding values in molecule B are 35.17 (6), 70.97 (6) and 69.62 (6)°, respectively.The π interactions (Table 1) and π–π interactions of Cg1···Cg1 = 3.7113 (8) Å (symmetry code: 1 - x, 1 - y, 1 - z) and Cg1···Cg2 = 3.7216 (7) Å (symmetry code: -x, 1 - y, 1 - z) link the molecules into a three-dimensional network. [Cg1, Cg2, Cg3 and Cg4 are the centroids of the C1A–C6A, C8A–C13A, C15A–C20A and C8B–C13B rings, respectively].
is shown in Fig. 2. The molecules are linked together with another neighbouring molecules via C17A—H17A···O4B hydrogen bonds (Table 1) to form inversion dimers. C—H···For background to 1-((3-(benzyloxy)-2-nitrophenoxy)methyl)benzene derivatives, see: Altmann et al. (2004); Ohkubo et al. (1997). For related structures, see: Naveenkumar et al. (2009); Fun et al. (2011); Ren & Wang (2012). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids. | |
Fig. 2. The crystal packing of the title compound, showing the formation of the inversion dimers. For the sake of clarity, those H atoms not involved in the intermolecular interactions (dashed lines) have been omitted. |
C20H17NO4 | Z = 4 |
Mr = 335.35 | F(000) = 704 |
Triclinic, P1 | Dx = 1.340 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.6150 (4) Å | Cell parameters from 9997 reflections |
b = 14.6248 (7) Å | θ = 2.7–30.1° |
c = 15.2915 (8) Å | µ = 0.09 mm−1 |
α = 94.706 (1)° | T = 100 K |
β = 101.627 (1)° | Plate, orange |
γ = 90.572 (1)° | 0.26 × 0.19 × 0.09 mm |
V = 1661.80 (15) Å3 |
Bruker SMART APEXII DUO CCD diffractometer | 9716 independent reflections |
Radiation source: fine-focus sealed tube | 7508 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
φ and ω scans | θmax = 30.1°, θmin = 1.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −10→10 |
Tmin = 0.976, Tmax = 0.992 | k = −20→20 |
35546 measured reflections | l = −21→21 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.117 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.054P)2 + 0.4706P] where P = (Fo2 + 2Fc2)/3 |
9716 reflections | (Δ/σ)max < 0.001 |
451 parameters | Δρmax = 0.38 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C20H17NO4 | γ = 90.572 (1)° |
Mr = 335.35 | V = 1661.80 (15) Å3 |
Triclinic, P1 | Z = 4 |
a = 7.6150 (4) Å | Mo Kα radiation |
b = 14.6248 (7) Å | µ = 0.09 mm−1 |
c = 15.2915 (8) Å | T = 100 K |
α = 94.706 (1)° | 0.26 × 0.19 × 0.09 mm |
β = 101.627 (1)° |
Bruker SMART APEXII DUO CCD diffractometer | 9716 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 7508 reflections with I > 2σ(I) |
Tmin = 0.976, Tmax = 0.992 | Rint = 0.032 |
35546 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.117 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.38 e Å−3 |
9716 reflections | Δρmin = −0.29 e Å−3 |
451 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1A | 0.13559 (11) | 0.36930 (5) | 0.49220 (6) | 0.02214 (17) | |
O2A | −0.10558 (10) | 0.09202 (5) | 0.55126 (5) | 0.02063 (17) | |
O3A | 0.25107 (14) | 0.20447 (9) | 0.62840 (7) | 0.0468 (3) | |
O4A | 0.04238 (16) | 0.28956 (9) | 0.65945 (7) | 0.0513 (3) | |
N1A | 0.10941 (13) | 0.24213 (7) | 0.60732 (7) | 0.0215 (2) | |
C1A | 0.32496 (16) | 0.52370 (8) | 0.57710 (9) | 0.0262 (2) | |
H1AA | 0.3024 | 0.4741 | 0.6101 | 0.031* | |
C2A | 0.42369 (17) | 0.60071 (9) | 0.62090 (11) | 0.0336 (3) | |
H2AA | 0.4673 | 0.6039 | 0.6838 | 0.040* | |
C3A | 0.45841 (18) | 0.67279 (9) | 0.57274 (12) | 0.0381 (4) | |
H3AA | 0.5258 | 0.7253 | 0.6028 | 0.046* | |
C4A | 0.39539 (19) | 0.66844 (9) | 0.48159 (12) | 0.0374 (3) | |
H4AA | 0.4204 | 0.7176 | 0.4487 | 0.045* | |
C5A | 0.29527 (17) | 0.59230 (8) | 0.43760 (10) | 0.0302 (3) | |
H5AA | 0.2509 | 0.5898 | 0.3747 | 0.036* | |
C6A | 0.25959 (15) | 0.51938 (8) | 0.48546 (9) | 0.0230 (2) | |
C7A | 0.14950 (15) | 0.43950 (8) | 0.43354 (8) | 0.0218 (2) | |
H7AA | 0.0283 | 0.4599 | 0.4070 | 0.026* | |
H7AB | 0.2068 | 0.4148 | 0.3842 | 0.026* | |
C8A | 0.03602 (14) | 0.29318 (7) | 0.45495 (8) | 0.0185 (2) | |
C9A | −0.04526 (15) | 0.27616 (8) | 0.36507 (8) | 0.0201 (2) | |
H9AA | −0.0334 | 0.3195 | 0.3235 | 0.024* | |
C10A | −0.14422 (15) | 0.19488 (8) | 0.33674 (8) | 0.0206 (2) | |
H10A | −0.1983 | 0.1832 | 0.2751 | 0.025* | |
C11A | −0.16659 (15) | 0.13023 (8) | 0.39534 (8) | 0.0196 (2) | |
H11A | −0.2345 | 0.0752 | 0.3741 | 0.024* | |
C12A | −0.08803 (14) | 0.14722 (7) | 0.48569 (7) | 0.0176 (2) | |
C13A | 0.01607 (14) | 0.22707 (7) | 0.51330 (7) | 0.0176 (2) | |
C14A | −0.24977 (15) | 0.02361 (8) | 0.52786 (8) | 0.0198 (2) | |
H14A | −0.2090 | −0.0319 | 0.4969 | 0.024* | |
H14B | −0.3530 | 0.0480 | 0.4870 | 0.024* | |
C15A | −0.30454 (14) | −0.00015 (7) | 0.61225 (8) | 0.0179 (2) | |
C16A | −0.29037 (15) | −0.08909 (8) | 0.63851 (8) | 0.0207 (2) | |
H16A | −0.2380 | −0.1348 | 0.6049 | 0.025* | |
C17A | −0.35264 (16) | −0.11121 (9) | 0.71380 (9) | 0.0260 (3) | |
H17A | −0.3434 | −0.1721 | 0.7313 | 0.031* | |
C18A | −0.42811 (17) | −0.04469 (10) | 0.76329 (9) | 0.0297 (3) | |
H18A | −0.4709 | −0.0600 | 0.8146 | 0.036* | |
C19A | −0.44114 (19) | 0.04415 (10) | 0.73792 (9) | 0.0322 (3) | |
H19A | −0.4920 | 0.0900 | 0.7722 | 0.039* | |
C20A | −0.38016 (17) | 0.06621 (8) | 0.66276 (9) | 0.0257 (2) | |
H20A | −0.3900 | 0.1272 | 0.6455 | 0.031* | |
O1B | 0.61240 (11) | 0.48372 (5) | 0.17237 (6) | 0.02478 (18) | |
O2B | 0.81078 (10) | 0.19193 (5) | 0.10404 (6) | 0.02094 (17) | |
O3B | 0.44330 (11) | 0.33094 (6) | 0.04889 (6) | 0.0286 (2) | |
O4B | 0.49167 (11) | 0.25710 (6) | 0.16793 (6) | 0.02714 (19) | |
N1B | 0.54058 (12) | 0.30732 (6) | 0.11650 (7) | 0.01836 (18) | |
C1B | 0.31381 (17) | 0.57666 (8) | 0.08217 (8) | 0.0234 (2) | |
H1BA | 0.3444 | 0.5245 | 0.0477 | 0.028* | |
C2B | 0.14345 (17) | 0.61162 (8) | 0.06114 (8) | 0.0257 (2) | |
H2BA | 0.0577 | 0.5829 | 0.0126 | 0.031* | |
C3B | 0.09729 (18) | 0.68790 (9) | 0.11025 (10) | 0.0316 (3) | |
H3BA | −0.0192 | 0.7121 | 0.0951 | 0.038* | |
C4B | 0.2218 (2) | 0.72864 (10) | 0.18152 (11) | 0.0401 (4) | |
H4BA | 0.1905 | 0.7809 | 0.2157 | 0.048* | |
C5B | 0.39273 (19) | 0.69359 (9) | 0.20353 (10) | 0.0342 (3) | |
H5BA | 0.4774 | 0.7217 | 0.2529 | 0.041* | |
C6B | 0.44001 (16) | 0.61761 (8) | 0.15347 (8) | 0.0223 (2) | |
C7B | 0.62756 (17) | 0.58239 (8) | 0.17359 (9) | 0.0262 (2) | |
H7BA | 0.6945 | 0.5995 | 0.1279 | 0.031* | |
H7BB | 0.6923 | 0.6090 | 0.2331 | 0.031* | |
C8B | 0.76005 (15) | 0.43423 (8) | 0.16589 (8) | 0.0209 (2) | |
C9B | 0.93703 (16) | 0.46798 (8) | 0.18596 (8) | 0.0243 (2) | |
H9BA | 0.9639 | 0.5306 | 0.2065 | 0.029* | |
C10B | 1.07298 (16) | 0.40807 (8) | 0.17527 (8) | 0.0249 (2) | |
H10B | 1.1932 | 0.4313 | 0.1877 | 0.030* | |
C11B | 1.04041 (15) | 0.31547 (8) | 0.14720 (8) | 0.0224 (2) | |
H11B | 1.1365 | 0.2765 | 0.1401 | 0.027* | |
C12B | 0.86381 (14) | 0.28059 (7) | 0.12962 (7) | 0.0186 (2) | |
C13B | 0.72783 (14) | 0.34141 (7) | 0.13854 (7) | 0.0180 (2) | |
C14B | 0.94773 (16) | 0.12652 (8) | 0.09238 (10) | 0.0267 (3) | |
H14C | 1.0539 | 0.1373 | 0.1417 | 0.032* | |
H14D | 0.9856 | 0.1330 | 0.0349 | 0.032* | |
C15B | 0.86818 (15) | 0.03228 (8) | 0.09284 (8) | 0.0223 (2) | |
C16B | 0.74639 (17) | −0.00707 (9) | 0.01872 (9) | 0.0271 (3) | |
H16B | 0.7152 | 0.0253 | −0.0334 | 0.033* | |
C17B | 0.67035 (18) | −0.09329 (9) | 0.02052 (10) | 0.0307 (3) | |
H17B | 0.5868 | −0.1196 | −0.0302 | 0.037* | |
C18B | 0.71567 (17) | −0.14099 (9) | 0.09577 (10) | 0.0293 (3) | |
H18B | 0.6627 | −0.1999 | 0.0969 | 0.035* | |
C19B | 0.83853 (18) | −0.10289 (9) | 0.16962 (10) | 0.0313 (3) | |
H19B | 0.8711 | −0.1360 | 0.2211 | 0.038* | |
C20B | 0.91417 (17) | −0.01623 (9) | 0.16831 (9) | 0.0281 (3) | |
H20B | 0.9976 | 0.0100 | 0.2192 | 0.034* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1A | 0.0237 (4) | 0.0180 (4) | 0.0246 (4) | −0.0058 (3) | 0.0041 (3) | 0.0039 (3) |
O2A | 0.0195 (4) | 0.0217 (4) | 0.0198 (4) | −0.0067 (3) | 0.0004 (3) | 0.0063 (3) |
O3A | 0.0319 (5) | 0.0672 (8) | 0.0343 (6) | 0.0153 (5) | −0.0084 (4) | −0.0002 (5) |
O4A | 0.0507 (7) | 0.0733 (8) | 0.0250 (5) | 0.0227 (6) | 0.0016 (5) | −0.0121 (5) |
N1A | 0.0211 (4) | 0.0216 (5) | 0.0209 (5) | −0.0061 (4) | 0.0016 (4) | 0.0036 (4) |
C1A | 0.0207 (5) | 0.0216 (5) | 0.0378 (7) | −0.0006 (4) | 0.0106 (5) | −0.0007 (5) |
C2A | 0.0237 (6) | 0.0299 (6) | 0.0467 (8) | −0.0024 (5) | 0.0119 (6) | −0.0109 (6) |
C3A | 0.0257 (6) | 0.0200 (6) | 0.0697 (11) | −0.0039 (5) | 0.0176 (7) | −0.0096 (6) |
C4A | 0.0325 (7) | 0.0162 (5) | 0.0684 (11) | 0.0007 (5) | 0.0208 (7) | 0.0072 (6) |
C5A | 0.0267 (6) | 0.0190 (5) | 0.0483 (8) | 0.0026 (5) | 0.0132 (6) | 0.0085 (5) |
C6A | 0.0170 (5) | 0.0161 (5) | 0.0382 (7) | 0.0015 (4) | 0.0109 (5) | 0.0028 (4) |
C7A | 0.0193 (5) | 0.0189 (5) | 0.0287 (6) | −0.0008 (4) | 0.0065 (4) | 0.0072 (4) |
C8A | 0.0157 (5) | 0.0167 (5) | 0.0239 (6) | −0.0002 (4) | 0.0053 (4) | 0.0021 (4) |
C9A | 0.0206 (5) | 0.0196 (5) | 0.0213 (5) | 0.0012 (4) | 0.0061 (4) | 0.0056 (4) |
C10A | 0.0208 (5) | 0.0229 (5) | 0.0182 (5) | 0.0017 (4) | 0.0035 (4) | 0.0033 (4) |
C11A | 0.0193 (5) | 0.0185 (5) | 0.0204 (5) | −0.0015 (4) | 0.0024 (4) | 0.0019 (4) |
C12A | 0.0163 (5) | 0.0174 (5) | 0.0199 (5) | 0.0005 (4) | 0.0044 (4) | 0.0044 (4) |
C13A | 0.0159 (4) | 0.0188 (5) | 0.0178 (5) | −0.0004 (4) | 0.0025 (4) | 0.0023 (4) |
C14A | 0.0186 (5) | 0.0180 (5) | 0.0223 (6) | −0.0049 (4) | 0.0030 (4) | 0.0025 (4) |
C15A | 0.0155 (4) | 0.0173 (5) | 0.0203 (5) | −0.0031 (4) | 0.0021 (4) | 0.0018 (4) |
C16A | 0.0180 (5) | 0.0184 (5) | 0.0251 (6) | −0.0013 (4) | 0.0027 (4) | 0.0025 (4) |
C17A | 0.0229 (5) | 0.0266 (6) | 0.0273 (6) | −0.0076 (4) | −0.0003 (5) | 0.0097 (5) |
C18A | 0.0273 (6) | 0.0413 (7) | 0.0209 (6) | −0.0120 (5) | 0.0058 (5) | 0.0036 (5) |
C19A | 0.0345 (7) | 0.0337 (7) | 0.0304 (7) | −0.0027 (5) | 0.0145 (5) | −0.0059 (5) |
C20A | 0.0293 (6) | 0.0188 (5) | 0.0298 (6) | 0.0011 (4) | 0.0082 (5) | 0.0008 (4) |
O1B | 0.0241 (4) | 0.0144 (4) | 0.0377 (5) | 0.0001 (3) | 0.0098 (4) | 0.0045 (3) |
O2B | 0.0170 (4) | 0.0180 (4) | 0.0286 (4) | 0.0028 (3) | 0.0059 (3) | 0.0027 (3) |
O3B | 0.0220 (4) | 0.0330 (5) | 0.0293 (5) | −0.0011 (3) | −0.0010 (3) | 0.0101 (4) |
O4B | 0.0240 (4) | 0.0280 (4) | 0.0327 (5) | −0.0033 (3) | 0.0100 (4) | 0.0121 (4) |
N1B | 0.0172 (4) | 0.0153 (4) | 0.0236 (5) | 0.0010 (3) | 0.0062 (3) | 0.0026 (3) |
C1B | 0.0317 (6) | 0.0186 (5) | 0.0208 (6) | 0.0006 (4) | 0.0069 (5) | 0.0024 (4) |
C2B | 0.0302 (6) | 0.0223 (5) | 0.0242 (6) | −0.0025 (5) | 0.0032 (5) | 0.0063 (4) |
C3B | 0.0268 (6) | 0.0237 (6) | 0.0455 (8) | 0.0018 (5) | 0.0089 (6) | 0.0051 (5) |
C4B | 0.0364 (7) | 0.0284 (7) | 0.0531 (9) | 0.0049 (6) | 0.0095 (7) | −0.0129 (6) |
C5B | 0.0332 (7) | 0.0261 (6) | 0.0390 (8) | −0.0007 (5) | 0.0024 (6) | −0.0099 (5) |
C6B | 0.0272 (6) | 0.0154 (5) | 0.0252 (6) | −0.0016 (4) | 0.0070 (5) | 0.0038 (4) |
C7B | 0.0276 (6) | 0.0145 (5) | 0.0357 (7) | −0.0020 (4) | 0.0043 (5) | 0.0027 (4) |
C8B | 0.0221 (5) | 0.0187 (5) | 0.0231 (6) | −0.0005 (4) | 0.0054 (4) | 0.0063 (4) |
C9B | 0.0244 (5) | 0.0203 (5) | 0.0280 (6) | −0.0048 (4) | 0.0033 (5) | 0.0065 (4) |
C10B | 0.0194 (5) | 0.0277 (6) | 0.0276 (6) | −0.0053 (4) | 0.0018 (4) | 0.0112 (5) |
C11B | 0.0174 (5) | 0.0263 (6) | 0.0249 (6) | 0.0008 (4) | 0.0046 (4) | 0.0100 (4) |
C12B | 0.0187 (5) | 0.0193 (5) | 0.0190 (5) | 0.0003 (4) | 0.0047 (4) | 0.0059 (4) |
C13B | 0.0162 (5) | 0.0184 (5) | 0.0204 (5) | −0.0018 (4) | 0.0044 (4) | 0.0058 (4) |
C14B | 0.0192 (5) | 0.0222 (6) | 0.0406 (7) | 0.0054 (4) | 0.0100 (5) | 0.0032 (5) |
C15B | 0.0185 (5) | 0.0201 (5) | 0.0298 (6) | 0.0059 (4) | 0.0081 (4) | 0.0021 (4) |
C16B | 0.0288 (6) | 0.0263 (6) | 0.0265 (6) | 0.0057 (5) | 0.0054 (5) | 0.0033 (5) |
C17B | 0.0301 (6) | 0.0269 (6) | 0.0334 (7) | 0.0011 (5) | 0.0051 (5) | −0.0040 (5) |
C18B | 0.0290 (6) | 0.0212 (6) | 0.0405 (8) | 0.0032 (5) | 0.0140 (5) | 0.0015 (5) |
C19B | 0.0330 (7) | 0.0300 (6) | 0.0337 (7) | 0.0066 (5) | 0.0095 (5) | 0.0115 (5) |
C20B | 0.0245 (6) | 0.0295 (6) | 0.0293 (7) | 0.0037 (5) | 0.0027 (5) | 0.0039 (5) |
O1A—C8A | 1.3579 (13) | O1B—C8B | 1.3591 (14) |
O1A—C7A | 1.4343 (13) | O1B—C7B | 1.4448 (13) |
O2A—C12A | 1.3636 (13) | O2B—C12B | 1.3565 (13) |
O2A—C14A | 1.4476 (13) | O2B—C14B | 1.4495 (13) |
O3A—N1A | 1.2131 (14) | O3B—N1B | 1.2214 (12) |
O4A—N1A | 1.2073 (14) | O4B—N1B | 1.2263 (12) |
N1A—C13A | 1.4675 (14) | N1B—C13B | 1.4697 (14) |
C1A—C6A | 1.3854 (19) | C1B—C2B | 1.3856 (17) |
C1A—C2A | 1.3924 (18) | C1B—C6B | 1.3892 (17) |
C1A—H1AA | 0.9500 | C1B—H1BA | 0.9500 |
C2A—C3A | 1.387 (2) | C2B—C3B | 1.3815 (18) |
C2A—H2AA | 0.9500 | C2B—H2BA | 0.9500 |
C3A—C4A | 1.376 (2) | C3B—C4B | 1.381 (2) |
C3A—H3AA | 0.9500 | C3B—H3BA | 0.9500 |
C4A—C5A | 1.388 (2) | C4B—C5B | 1.391 (2) |
C4A—H4AA | 0.9500 | C4B—H4BA | 0.9500 |
C5A—C6A | 1.3961 (17) | C5B—C6B | 1.3892 (17) |
C5A—H5AA | 0.9500 | C5B—H5BA | 0.9500 |
C6A—C7A | 1.5026 (16) | C6B—C7B | 1.5045 (17) |
C7A—H7AA | 0.9900 | C7B—H7BA | 0.9900 |
C7A—H7AB | 0.9900 | C7B—H7BB | 0.9900 |
C8A—C9A | 1.3899 (16) | C8B—C13B | 1.3916 (15) |
C8A—C13A | 1.3954 (15) | C8B—C9B | 1.3962 (16) |
C9A—C10A | 1.3909 (16) | C9B—C10B | 1.3889 (17) |
C9A—H9AA | 0.9500 | C9B—H9BA | 0.9500 |
C10A—C11A | 1.3868 (15) | C10B—C11B | 1.3909 (17) |
C10A—H10A | 0.9500 | C10B—H10B | 0.9500 |
C11A—C12A | 1.3914 (16) | C11B—C12B | 1.3997 (15) |
C11A—H11A | 0.9500 | C11B—H11B | 0.9500 |
C12A—C13A | 1.3915 (15) | C12B—C13B | 1.3919 (15) |
C14A—C15A | 1.4992 (16) | C14B—C15B | 1.5010 (17) |
C14A—H14A | 0.9900 | C14B—H14C | 0.9900 |
C14A—H14B | 0.9900 | C14B—H14D | 0.9900 |
C15A—C16A | 1.3914 (15) | C15B—C20B | 1.3907 (17) |
C15A—C20A | 1.3919 (16) | C15B—C16B | 1.3910 (18) |
C16A—C17A | 1.3903 (17) | C16B—C17B | 1.3869 (18) |
C16A—H16A | 0.9500 | C16B—H16B | 0.9500 |
C17A—C18A | 1.3838 (19) | C17B—C18B | 1.381 (2) |
C17A—H17A | 0.9500 | C17B—H17B | 0.9500 |
C18A—C19A | 1.385 (2) | C18B—C19B | 1.386 (2) |
C18A—H18A | 0.9500 | C18B—H18B | 0.9500 |
C19A—C20A | 1.3833 (19) | C19B—C20B | 1.3903 (19) |
C19A—H19A | 0.9500 | C19B—H19B | 0.9500 |
C20A—H20A | 0.9500 | C20B—H20B | 0.9500 |
C8A—O1A—C7A | 116.28 (9) | C8B—O1B—C7B | 117.97 (9) |
C12A—O2A—C14A | 115.70 (8) | C12B—O2B—C14B | 117.79 (9) |
O4A—N1A—O3A | 123.50 (11) | O3B—N1B—O4B | 124.10 (10) |
O4A—N1A—C13A | 119.39 (10) | O3B—N1B—C13B | 118.39 (9) |
O3A—N1A—C13A | 117.10 (10) | O4B—N1B—C13B | 117.50 (9) |
C6A—C1A—C2A | 120.03 (12) | C2B—C1B—C6B | 120.28 (11) |
C6A—C1A—H1AA | 120.0 | C2B—C1B—H1BA | 119.9 |
C2A—C1A—H1AA | 120.0 | C6B—C1B—H1BA | 119.9 |
C3A—C2A—C1A | 120.08 (14) | C3B—C2B—C1B | 120.54 (12) |
C3A—C2A—H2AA | 120.0 | C3B—C2B—H2BA | 119.7 |
C1A—C2A—H2AA | 120.0 | C1B—C2B—H2BA | 119.7 |
C4A—C3A—C2A | 120.12 (13) | C4B—C3B—C2B | 119.47 (12) |
C4A—C3A—H3AA | 119.9 | C4B—C3B—H3BA | 120.3 |
C2A—C3A—H3AA | 119.9 | C2B—C3B—H3BA | 120.3 |
C3A—C4A—C5A | 120.13 (13) | C3B—C4B—C5B | 120.38 (13) |
C3A—C4A—H4AA | 119.9 | C3B—C4B—H4BA | 119.8 |
C5A—C4A—H4AA | 119.9 | C5B—C4B—H4BA | 119.8 |
C4A—C5A—C6A | 120.20 (14) | C6B—C5B—C4B | 120.19 (13) |
C4A—C5A—H5AA | 119.9 | C6B—C5B—H5BA | 119.9 |
C6A—C5A—H5AA | 119.9 | C4B—C5B—H5BA | 119.9 |
C1A—C6A—C5A | 119.44 (12) | C5B—C6B—C1B | 119.13 (11) |
C1A—C6A—C7A | 123.28 (11) | C5B—C6B—C7B | 120.56 (11) |
C5A—C6A—C7A | 117.28 (12) | C1B—C6B—C7B | 120.26 (11) |
O1A—C7A—C6A | 109.51 (10) | O1B—C7B—C6B | 107.15 (9) |
O1A—C7A—H7AA | 109.8 | O1B—C7B—H7BA | 110.3 |
C6A—C7A—H7AA | 109.8 | C6B—C7B—H7BA | 110.3 |
O1A—C7A—H7AB | 109.8 | O1B—C7B—H7BB | 110.3 |
C6A—C7A—H7AB | 109.8 | C6B—C7B—H7BB | 110.3 |
H7AA—C7A—H7AB | 108.2 | H7BA—C7B—H7BB | 108.5 |
O1A—C8A—C9A | 125.74 (10) | O1B—C8B—C13B | 115.54 (10) |
O1A—C8A—C13A | 115.96 (10) | O1B—C8B—C9B | 125.85 (11) |
C9A—C8A—C13A | 118.30 (10) | C13B—C8B—C9B | 118.59 (10) |
C8A—C9A—C10A | 119.19 (10) | C10B—C9B—C8B | 118.60 (11) |
C8A—C9A—H9AA | 120.4 | C10B—C9B—H9BA | 120.7 |
C10A—C9A—H9AA | 120.4 | C8B—C9B—H9BA | 120.7 |
C11A—C10A—C9A | 122.27 (11) | C9B—C10B—C11B | 122.72 (11) |
C11A—C10A—H10A | 118.9 | C9B—C10B—H10B | 118.6 |
C9A—C10A—H10A | 118.9 | C11B—C10B—H10B | 118.6 |
C10A—C11A—C12A | 119.00 (10) | C10B—C11B—C12B | 118.96 (11) |
C10A—C11A—H11A | 120.5 | C10B—C11B—H11B | 120.5 |
C12A—C11A—H11A | 120.5 | C12B—C11B—H11B | 120.5 |
O2A—C12A—C11A | 125.33 (10) | O2B—C12B—C13B | 115.94 (9) |
O2A—C12A—C13A | 116.09 (10) | O2B—C12B—C11B | 126.05 (10) |
C11A—C12A—C13A | 118.58 (10) | C13B—C12B—C11B | 118.01 (10) |
C12A—C13A—C8A | 122.56 (10) | C8B—C13B—C12B | 123.08 (10) |
C12A—C13A—N1A | 118.74 (9) | C8B—C13B—N1B | 117.85 (9) |
C8A—C13A—N1A | 118.70 (9) | C12B—C13B—N1B | 119.06 (10) |
O2A—C14A—C15A | 108.45 (9) | O2B—C14B—C15B | 107.41 (9) |
O2A—C14A—H14A | 110.0 | O2B—C14B—H14C | 110.2 |
C15A—C14A—H14A | 110.0 | C15B—C14B—H14C | 110.2 |
O2A—C14A—H14B | 110.0 | O2B—C14B—H14D | 110.2 |
C15A—C14A—H14B | 110.0 | C15B—C14B—H14D | 110.2 |
H14A—C14A—H14B | 108.4 | H14C—C14B—H14D | 108.5 |
C16A—C15A—C20A | 119.12 (11) | C20B—C15B—C16B | 119.24 (11) |
C16A—C15A—C14A | 121.02 (10) | C20B—C15B—C14B | 120.06 (11) |
C20A—C15A—C14A | 119.76 (10) | C16B—C15B—C14B | 120.69 (11) |
C17A—C16A—C15A | 120.20 (11) | C17B—C16B—C15B | 120.30 (12) |
C17A—C16A—H16A | 119.9 | C17B—C16B—H16B | 119.8 |
C15A—C16A—H16A | 119.9 | C15B—C16B—H16B | 119.8 |
C18A—C17A—C16A | 120.13 (11) | C18B—C17B—C16B | 120.26 (13) |
C18A—C17A—H17A | 119.9 | C18B—C17B—H17B | 119.9 |
C16A—C17A—H17A | 119.9 | C16B—C17B—H17B | 119.9 |
C17A—C18A—C19A | 119.93 (12) | C17B—C18B—C19B | 119.92 (12) |
C17A—C18A—H18A | 120.0 | C17B—C18B—H18B | 120.0 |
C19A—C18A—H18A | 120.0 | C19B—C18B—H18B | 120.0 |
C20A—C19A—C18A | 120.04 (12) | C18B—C19B—C20B | 120.00 (12) |
C20A—C19A—H19A | 120.0 | C18B—C19B—H19B | 120.0 |
C18A—C19A—H19A | 120.0 | C20B—C19B—H19B | 120.0 |
C19A—C20A—C15A | 120.57 (11) | C19B—C20B—C15B | 120.27 (12) |
C19A—C20A—H20A | 119.7 | C19B—C20B—H20B | 119.9 |
C15A—C20A—H20A | 119.7 | C15B—C20B—H20B | 119.9 |
C6A—C1A—C2A—C3A | −0.70 (18) | C6B—C1B—C2B—C3B | 0.48 (18) |
C1A—C2A—C3A—C4A | 0.03 (19) | C1B—C2B—C3B—C4B | −0.8 (2) |
C2A—C3A—C4A—C5A | 0.6 (2) | C2B—C3B—C4B—C5B | 0.4 (2) |
C3A—C4A—C5A—C6A | −0.65 (19) | C3B—C4B—C5B—C6B | 0.5 (2) |
C2A—C1A—C6A—C5A | 0.69 (17) | C4B—C5B—C6B—C1B | −0.8 (2) |
C2A—C1A—C6A—C7A | −178.96 (11) | C4B—C5B—C6B—C7B | 176.62 (13) |
C4A—C5A—C6A—C1A | −0.02 (18) | C2B—C1B—C6B—C5B | 0.36 (18) |
C4A—C5A—C6A—C7A | 179.65 (11) | C2B—C1B—C6B—C7B | −177.11 (11) |
C8A—O1A—C7A—C6A | 178.60 (9) | C8B—O1B—C7B—C6B | 163.48 (10) |
C1A—C6A—C7A—O1A | −3.76 (15) | C5B—C6B—C7B—O1B | 135.13 (12) |
C5A—C6A—C7A—O1A | 176.59 (9) | C1B—C6B—C7B—O1B | −47.45 (15) |
C7A—O1A—C8A—C9A | 3.17 (15) | C7B—O1B—C8B—C13B | −161.68 (10) |
C7A—O1A—C8A—C13A | −177.09 (9) | C7B—O1B—C8B—C9B | 19.83 (18) |
O1A—C8A—C9A—C10A | −179.70 (10) | O1B—C8B—C9B—C10B | −179.71 (11) |
C13A—C8A—C9A—C10A | 0.56 (16) | C13B—C8B—C9B—C10B | 1.85 (17) |
C8A—C9A—C10A—C11A | 0.73 (17) | C8B—C9B—C10B—C11B | −1.37 (19) |
C9A—C10A—C11A—C12A | 0.23 (17) | C9B—C10B—C11B—C12B | −0.57 (18) |
C14A—O2A—C12A—C11A | −15.49 (15) | C14B—O2B—C12B—C13B | 178.94 (10) |
C14A—O2A—C12A—C13A | 163.81 (9) | C14B—O2B—C12B—C11B | −0.86 (16) |
C10A—C11A—C12A—O2A | 176.84 (10) | C10B—C11B—C12B—O2B | −178.27 (11) |
C10A—C11A—C12A—C13A | −2.44 (16) | C10B—C11B—C12B—C13B | 1.93 (17) |
O2A—C12A—C13A—C8A | −175.50 (9) | O1B—C8B—C13B—C12B | −179.07 (10) |
C11A—C12A—C13A—C8A | 3.85 (16) | C9B—C8B—C13B—C12B | −0.46 (17) |
O2A—C12A—C13A—N1A | 4.89 (14) | O1B—C8B—C13B—N1B | 2.22 (15) |
C11A—C12A—C13A—N1A | −175.76 (10) | C9B—C8B—C13B—N1B | −179.17 (10) |
O1A—C8A—C13A—C12A | 177.34 (10) | O2B—C12B—C13B—C8B | 178.73 (10) |
C9A—C8A—C13A—C12A | −2.89 (16) | C11B—C12B—C13B—C8B | −1.46 (17) |
O1A—C8A—C13A—N1A | −3.04 (14) | O2B—C12B—C13B—N1B | −2.58 (15) |
C9A—C8A—C13A—N1A | 176.72 (10) | C11B—C12B—C13B—N1B | 177.24 (10) |
O4A—N1A—C13A—C12A | −97.23 (14) | O3B—N1B—C13B—C8B | 69.71 (14) |
O3A—N1A—C13A—C12A | 81.92 (14) | O4B—N1B—C13B—C8B | −109.84 (12) |
O4A—N1A—C13A—C8A | 83.14 (14) | O3B—N1B—C13B—C12B | −109.06 (12) |
O3A—N1A—C13A—C8A | −97.71 (13) | O4B—N1B—C13B—C12B | 71.39 (14) |
C12A—O2A—C14A—C15A | −154.61 (9) | C12B—O2B—C14B—C15B | 162.67 (10) |
O2A—C14A—C15A—C16A | −118.80 (11) | O2B—C14B—C15B—C20B | −103.79 (12) |
O2A—C14A—C15A—C20A | 64.84 (13) | O2B—C14B—C15B—C16B | 75.37 (14) |
C20A—C15A—C16A—C17A | 0.58 (17) | C20B—C15B—C16B—C17B | 0.69 (18) |
C14A—C15A—C16A—C17A | −175.80 (10) | C14B—C15B—C16B—C17B | −178.48 (11) |
C15A—C16A—C17A—C18A | −0.37 (17) | C15B—C16B—C17B—C18B | −0.35 (19) |
C16A—C17A—C18A—C19A | −0.19 (19) | C16B—C17B—C18B—C19B | −0.43 (19) |
C17A—C18A—C19A—C20A | 0.5 (2) | C17B—C18B—C19B—C20B | 0.85 (19) |
C18A—C19A—C20A—C15A | −0.3 (2) | C18B—C19B—C20B—C15B | −0.50 (19) |
C16A—C15A—C20A—C19A | −0.23 (18) | C16B—C15B—C20B—C19B | −0.27 (18) |
C14A—C15A—C20A—C19A | 176.19 (11) | C14B—C15B—C20B—C19B | 178.91 (11) |
Cg2 , Cg3 and Cg4 are the centroids of the C8A–C13A, C15A–C20A and C8B–C13B rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C17A—H17A···O4Bi | 0.95 | 2.49 | 3.2100 (16) | 133 |
C9A—H9AA···Cg4ii | 0.95 | 2.68 | 3.5487 (13) | 152 |
C16A—H16A···Cg2i | 0.95 | 2.68 | 3.5161 (13) | 147 |
C20B—H20B···Cg3iii | 0.95 | 2.87 | 3.7013 (14) | 146 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x−1, y, z; (iii) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H17NO4 |
Mr | 335.35 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 7.6150 (4), 14.6248 (7), 15.2915 (8) |
α, β, γ (°) | 94.706 (1), 101.627 (1), 90.572 (1) |
V (Å3) | 1661.80 (15) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.26 × 0.19 × 0.09 |
Data collection | |
Diffractometer | Bruker SMART APEXII DUO CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.976, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 35546, 9716, 7508 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.706 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.117, 1.03 |
No. of reflections | 9716 |
No. of parameters | 451 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.38, −0.29 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg2 , Cg3 and Cg4 are the centroids of the C8A–C13A, C15A–C20A and C8B–C13B rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C17A—H17A···O4Bi | 0.95 | 2.49 | 3.2100 (16) | 133 |
C9A—H9AA···Cg4ii | 0.95 | 2.68 | 3.5487 (13) | 152 |
C16A—H16A···Cg2i | 0.95 | 2.68 | 3.5161 (13) | 147 |
C20B—H20B···Cg3iii | 0.95 | 2.87 | 3.7013 (14) | 146 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x−1, y, z; (iii) −x+1, −y, −z+1. |
Footnotes
‡Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
HKF and SA thank Universiti Sains Malaysia (USM) for the Research University Grant (1001/PFIZIK/811160). SA also thanks the Malaysian Government and USM for the Academic Staff Training Scheme (ASTS) award. AMI thanks the Board of Research in Nuclear Sciences, Government of India, for a 'Young Scientist' award.
References
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1-((3-(Benzyloxy)-2-nitrophenoxy)methyl)benzene derivatives are extensively used in Medicinal Chemistry as important intermediates for many pharmaceutical products (Altmann et al., 2004). 3-(Benzyloxy)-2-nitrophenol is used as intermediate for the synthesis of anticancer products and many natural products as well (Ohkubo et al., 1997). As part of our studies in this area, we hereby report the crystal structure of the title compound.
The asymmetric unit of the title compound (Fig. 1), consists of two crystallographically independent molecules, A and B. Bond lengths and angles are within normal ranges (Naveenkumar et al., 2009; Fun et al., 2011; Ren & Wang, 2012). In molecule A, the central benzene ring (C8A–C13A) forms dihedral angles of 2.26 (6) and 58.68 (6)°, respectively, with the terminal benzene rings (C1A–C6A & C15A–C20A). The dihedral angle between the terminal benzene rings is 56.45 (6)°. The corresponding values in molecule B are 35.17 (6), 70.97 (6) and 69.62 (6)°, respectively.
The crystal structure is shown in Fig. 2. The molecules are linked together with another neighbouring molecules via C17A—H17A···O4B hydrogen bonds (Table 1) to form inversion dimers. C—H···π interactions (Table 1) and π–π interactions of Cg1···Cg1 = 3.7113 (8) Å (symmetry code: 1 - x, 1 - y, 1 - z) and Cg1···Cg2 = 3.7216 (7) Å (symmetry code: -x, 1 - y, 1 - z) link the molecules into a three-dimensional network. [Cg1, Cg2, Cg3 and Cg4 are the centroids of the C1A–C6A, C8A–C13A, C15A–C20A and C8B–C13B rings, respectively].