organic compounds
2-(Naphthalen-1-yl)-N-(1,3-thiazol-2-yl)acetamide
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri 574 199, India, and cDepartment of Chemistry, P. A. College of Engineering, Nadupadavu, Mangalore 574 153, India
*Correspondence e-mail: hkfun@usm.my
In the title compound, C15H12N2OS, the naphthalene ring system [maximum deviation = 0.026 (1) Å] forms a dihedral angle of 85.69 (6)° with the thiazole ring [maximum deviation = 0.010 (1) Å]. In the crystal, inversion dimers linked by pairs of N—H⋯N hydrogen bonds generate R22(8) loops. The dimers are linked by C—H⋯O hydrogen bonds into chains propagating along [110].
Related literature
For general background to and the related structures of the title compound, see: Fun et al. (2010, 2011a,b, 2012). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536812031583/hb6894sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812031583/hb6894Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812031583/hb6894Isup3.cml
1-Naphthalene acetic acid (0.186 g, 1 mmol), 2-aminothiazole (0.1 g, 1 mmol) and 1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide hydrochloride (1.0 g, 0.01 mol) were dissolved in dichloromethane (20 mL). The mixture was stirred in presence of triethylamine at 273 K for about 3 h. The contents were poured into 100 mL of ice-cold aqueous hydrochloric acid with stirring, which was extracted thrice with dichloromethane. Organic layer was washed with saturated NaHCO3 solution and brine solution, dried and concentrated under reduced pressure to give the title compound (I). Brown blocks were grown from methanol and dichloromethane (1:1) mixture by the slow evaporation method (m. p. : 475-477 K).
The N-bound hydrogen atoms was located in a difference Fourier map and refined using a riding model Uiso(H) = 1.2 Ueq(N) [N–H = 0.8458 Å]. The remaining H atoms were positioned geometrically and refined using a riding model with C–H = 0.95 or 0.99 Å and Uiso(H) = 1.2 Ueq(C).
In continuation of our work on synthesis of
(Fun et al., 2010, 2011a, 2011b, 2012), we report herein the of the title compound.The molecular structure is shown in Fig. 1. Bond lengths are comparable to related structures (Fun et al., 2010, 2011a, 2011b, 2012). The naphthalene ring system (C6-C15, maximum deviation of 0.026 (1) Å at atom C6) forms a dihedral angle of 85.69 (6)° with the thiazol-2-yl ring (S1/N1/C1-C3, maximum deviation of 0.010 (1) Å at atom C3).
In the
Fig. 2, molecules are linked via N2–H1···N1 and C13–H13A···O1 hydrogen bonds (Table 1) into one-dimensional chains along [110].For general background to and the related structures of the title compound, see: Fun et al. (2010, 2011a,b, 2012). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C15H12N2OS | F(000) = 560 |
Mr = 268.33 | Dx = 1.449 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 5904 reflections |
a = 5.2668 (1) Å | θ = 2.3–32.5° |
b = 13.0861 (2) Å | µ = 0.26 mm−1 |
c = 18.5373 (3) Å | T = 100 K |
β = 105.640 (1)° | Block, brown |
V = 1230.32 (4) Å3 | 0.39 × 0.22 × 0.18 mm |
Z = 4 |
Bruker SMART APEXII CCD diffractometer | 4470 independent reflections |
Radiation source: fine-focus sealed tube | 3657 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
φ and ω scans | θmax = 32.6°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −7→7 |
Tmin = 0.907, Tmax = 0.956 | k = −19→19 |
17425 measured reflections | l = −26→28 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.108 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0389P)2 + 0.749P] where P = (Fo2 + 2Fc2)/3 |
4470 reflections | (Δ/σ)max = 0.001 |
172 parameters | Δρmax = 0.48 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
C15H12N2OS | V = 1230.32 (4) Å3 |
Mr = 268.33 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 5.2668 (1) Å | µ = 0.26 mm−1 |
b = 13.0861 (2) Å | T = 100 K |
c = 18.5373 (3) Å | 0.39 × 0.22 × 0.18 mm |
β = 105.640 (1)° |
Bruker SMART APEXII CCD diffractometer | 4470 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3657 reflections with I > 2σ(I) |
Tmin = 0.907, Tmax = 0.956 | Rint = 0.036 |
17425 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.108 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.48 e Å−3 |
4470 reflections | Δρmin = −0.28 e Å−3 |
172 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.40765 (6) | 0.66213 (3) | −0.105525 (19) | 0.01874 (9) | |
O1 | 0.7884 (2) | 0.80307 (8) | −0.04709 (6) | 0.0259 (2) | |
N1 | 0.6697 (2) | 0.49519 (9) | −0.06570 (6) | 0.0169 (2) | |
N2 | 0.9062 (2) | 0.64044 (8) | −0.01161 (6) | 0.0163 (2) | |
H1 | 1.0220 | 0.6004 | 0.0140 | 0.020* | |
C1 | 0.2553 (3) | 0.54707 (11) | −0.13559 (8) | 0.0199 (3) | |
H1A | 0.0793 | 0.5399 | −0.1659 | 0.024* | |
C2 | 0.4222 (3) | 0.46858 (11) | −0.10991 (8) | 0.0189 (3) | |
H2A | 0.3726 | 0.3994 | −0.1215 | 0.023* | |
C3 | 0.6867 (2) | 0.59466 (10) | −0.05809 (7) | 0.0154 (2) | |
C4 | 0.9383 (3) | 0.74460 (10) | −0.00491 (8) | 0.0178 (2) | |
C5 | 1.1574 (3) | 0.77925 (11) | 0.06208 (8) | 0.0190 (3) | |
H5A | 1.2188 | 0.8483 | 0.0529 | 0.023* | |
H5B | 1.3087 | 0.7316 | 0.0705 | 0.023* | |
C6 | 1.0495 (2) | 0.78093 (10) | 0.13046 (8) | 0.0174 (2) | |
C7 | 1.1084 (3) | 0.70263 (11) | 0.18172 (8) | 0.0191 (3) | |
H7A | 1.2283 | 0.6509 | 0.1761 | 0.023* | |
C8 | 0.9946 (3) | 0.69737 (11) | 0.24260 (8) | 0.0211 (3) | |
H8A | 1.0395 | 0.6428 | 0.2775 | 0.025* | |
C9 | 0.8202 (3) | 0.77057 (11) | 0.25133 (8) | 0.0210 (3) | |
H9A | 0.7405 | 0.7655 | 0.2915 | 0.025* | |
C10 | 0.7573 (2) | 0.85443 (10) | 0.20059 (8) | 0.0178 (2) | |
C11 | 0.5793 (3) | 0.93187 (11) | 0.20968 (8) | 0.0220 (3) | |
H11A | 0.5005 | 0.9276 | 0.2500 | 0.026* | |
C12 | 0.5200 (3) | 1.01268 (11) | 0.16105 (8) | 0.0226 (3) | |
H12A | 0.3992 | 1.0636 | 0.1674 | 0.027* | |
C13 | 0.6382 (3) | 1.02017 (11) | 0.10154 (8) | 0.0218 (3) | |
H13A | 0.5987 | 1.0769 | 0.0684 | 0.026* | |
C14 | 0.8101 (3) | 0.94631 (10) | 0.09084 (8) | 0.0199 (3) | |
H14A | 0.8875 | 0.9525 | 0.0503 | 0.024* | |
C15 | 0.8737 (2) | 0.86059 (10) | 0.13969 (7) | 0.0168 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01559 (14) | 0.01887 (16) | 0.02027 (16) | 0.00490 (11) | 0.00230 (11) | 0.00192 (12) |
O1 | 0.0310 (6) | 0.0161 (5) | 0.0268 (5) | 0.0046 (4) | 0.0013 (4) | 0.0015 (4) |
N1 | 0.0141 (5) | 0.0160 (5) | 0.0192 (5) | 0.0005 (4) | 0.0021 (4) | −0.0008 (4) |
N2 | 0.0140 (5) | 0.0131 (5) | 0.0203 (5) | 0.0017 (4) | 0.0018 (4) | 0.0008 (4) |
C1 | 0.0138 (5) | 0.0244 (7) | 0.0196 (6) | 0.0000 (5) | 0.0013 (4) | −0.0008 (5) |
C2 | 0.0146 (5) | 0.0209 (6) | 0.0197 (6) | −0.0015 (5) | 0.0020 (4) | −0.0016 (5) |
C3 | 0.0132 (5) | 0.0161 (6) | 0.0165 (5) | 0.0016 (4) | 0.0034 (4) | 0.0007 (4) |
C4 | 0.0180 (6) | 0.0151 (6) | 0.0214 (6) | 0.0007 (4) | 0.0073 (5) | −0.0011 (5) |
C5 | 0.0170 (6) | 0.0163 (6) | 0.0240 (7) | −0.0008 (4) | 0.0063 (5) | −0.0028 (5) |
C6 | 0.0142 (5) | 0.0159 (6) | 0.0210 (6) | −0.0018 (4) | 0.0027 (4) | −0.0031 (5) |
C7 | 0.0168 (6) | 0.0158 (6) | 0.0223 (6) | −0.0002 (4) | 0.0013 (5) | −0.0019 (5) |
C8 | 0.0213 (6) | 0.0187 (6) | 0.0201 (6) | −0.0015 (5) | 0.0002 (5) | 0.0016 (5) |
C9 | 0.0221 (6) | 0.0214 (7) | 0.0185 (6) | −0.0030 (5) | 0.0037 (5) | −0.0016 (5) |
C10 | 0.0147 (5) | 0.0176 (6) | 0.0194 (6) | −0.0028 (4) | 0.0014 (4) | −0.0049 (5) |
C11 | 0.0210 (6) | 0.0214 (7) | 0.0238 (7) | −0.0010 (5) | 0.0063 (5) | −0.0063 (5) |
C12 | 0.0209 (6) | 0.0178 (6) | 0.0274 (7) | 0.0017 (5) | 0.0035 (5) | −0.0057 (5) |
C13 | 0.0236 (6) | 0.0137 (6) | 0.0254 (7) | 0.0016 (5) | 0.0021 (5) | −0.0019 (5) |
C14 | 0.0210 (6) | 0.0162 (6) | 0.0221 (6) | −0.0012 (5) | 0.0052 (5) | −0.0018 (5) |
C15 | 0.0145 (5) | 0.0155 (6) | 0.0189 (6) | −0.0018 (4) | 0.0019 (4) | −0.0029 (4) |
S1—C1 | 1.7264 (15) | C7—C8 | 1.415 (2) |
S1—C3 | 1.7367 (13) | C7—H7A | 0.9500 |
O1—C4 | 1.2197 (17) | C8—C9 | 1.367 (2) |
N1—C3 | 1.3098 (17) | C8—H8A | 0.9500 |
N1—C2 | 1.3846 (17) | C9—C10 | 1.425 (2) |
N2—C4 | 1.3749 (17) | C9—H9A | 0.9500 |
N2—C3 | 1.3786 (16) | C10—C11 | 1.4209 (19) |
N2—H1 | 0.8458 | C10—C15 | 1.4247 (19) |
C1—C2 | 1.3523 (19) | C11—C12 | 1.370 (2) |
C1—H1A | 0.9500 | C11—H11A | 0.9500 |
C2—H2A | 0.9500 | C12—C13 | 1.409 (2) |
C4—C5 | 1.5188 (19) | C12—H12A | 0.9500 |
C5—C6 | 1.5229 (19) | C13—C14 | 1.375 (2) |
C5—H5A | 0.9900 | C13—H13A | 0.9500 |
C5—H5B | 0.9900 | C14—C15 | 1.4238 (19) |
C6—C7 | 1.3747 (19) | C14—H14A | 0.9500 |
C6—C15 | 1.4350 (18) | ||
C1—S1—C3 | 88.65 (6) | C6—C7—H7A | 119.3 |
C3—N1—C2 | 109.86 (11) | C8—C7—H7A | 119.3 |
C4—N2—C3 | 123.32 (11) | C9—C8—C7 | 120.21 (13) |
C4—N2—H1 | 120.7 | C9—C8—H8A | 119.9 |
C3—N2—H1 | 116.0 | C7—C8—H8A | 119.9 |
C2—C1—S1 | 110.32 (10) | C8—C9—C10 | 120.38 (13) |
C2—C1—H1A | 124.8 | C8—C9—H9A | 119.8 |
S1—C1—H1A | 124.8 | C10—C9—H9A | 119.8 |
C1—C2—N1 | 115.87 (13) | C11—C10—C15 | 119.47 (13) |
C1—C2—H2A | 122.1 | C11—C10—C9 | 120.96 (13) |
N1—C2—H2A | 122.1 | C15—C10—C9 | 119.57 (12) |
N1—C3—N2 | 121.37 (11) | C12—C11—C10 | 120.89 (14) |
N1—C3—S1 | 115.27 (10) | C12—C11—H11A | 119.6 |
N2—C3—S1 | 123.24 (10) | C10—C11—H11A | 119.6 |
O1—C4—N2 | 121.42 (13) | C11—C12—C13 | 119.88 (13) |
O1—C4—C5 | 123.70 (13) | C11—C12—H12A | 120.1 |
N2—C4—C5 | 114.69 (12) | C13—C12—H12A | 120.1 |
C4—C5—C6 | 108.24 (11) | C14—C13—C12 | 120.76 (14) |
C4—C5—H5A | 110.1 | C14—C13—H13A | 119.6 |
C6—C5—H5A | 110.1 | C12—C13—H13A | 119.6 |
C4—C5—H5B | 110.1 | C13—C14—C15 | 120.87 (13) |
C6—C5—H5B | 110.1 | C13—C14—H14A | 119.6 |
H5A—C5—H5B | 108.4 | C15—C14—H14A | 119.6 |
C7—C6—C15 | 119.46 (13) | C14—C15—C10 | 118.10 (12) |
C7—C6—C5 | 119.95 (12) | C14—C15—C6 | 123.03 (13) |
C15—C6—C5 | 120.50 (12) | C10—C15—C6 | 118.87 (12) |
C6—C7—C8 | 121.48 (13) | ||
C3—S1—C1—C2 | −1.29 (11) | C7—C8—C9—C10 | −1.9 (2) |
S1—C1—C2—N1 | 0.83 (16) | C8—C9—C10—C11 | −179.05 (13) |
C3—N1—C2—C1 | 0.34 (18) | C8—C9—C10—C15 | 1.2 (2) |
C2—N1—C3—N2 | 174.69 (12) | C15—C10—C11—C12 | −0.5 (2) |
C2—N1—C3—S1 | −1.39 (15) | C9—C10—C11—C12 | 179.70 (13) |
C4—N2—C3—N1 | 176.49 (13) | C10—C11—C12—C13 | −0.7 (2) |
C4—N2—C3—S1 | −7.74 (18) | C11—C12—C13—C14 | 1.0 (2) |
C1—S1—C3—N1 | 1.59 (11) | C12—C13—C14—C15 | −0.2 (2) |
C1—S1—C3—N2 | −174.41 (12) | C13—C14—C15—C10 | −1.0 (2) |
C3—N2—C4—O1 | −9.5 (2) | C13—C14—C15—C6 | 179.30 (13) |
C3—N2—C4—C5 | 165.66 (12) | C11—C10—C15—C14 | 1.30 (18) |
O1—C4—C5—C6 | 92.07 (16) | C9—C10—C15—C14 | −178.91 (12) |
N2—C4—C5—C6 | −82.97 (14) | C11—C10—C15—C6 | −178.95 (12) |
C4—C5—C6—C7 | 101.68 (14) | C9—C10—C15—C6 | 0.84 (18) |
C4—C5—C6—C15 | −74.62 (15) | C7—C6—C15—C14 | 177.58 (12) |
C15—C6—C7—C8 | 1.5 (2) | C5—C6—C15—C14 | −6.11 (19) |
C5—C6—C7—C8 | −174.79 (12) | C7—C6—C15—C10 | −2.16 (18) |
C6—C7—C8—C9 | 0.5 (2) | C5—C6—C15—C10 | 174.15 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1···N1i | 0.85 | 2.07 | 2.9099 (16) | 172 |
C13—H13A···O1ii | 0.95 | 2.52 | 3.1929 (19) | 128 |
Symmetry codes: (i) −x+2, −y+1, −z; (ii) −x+1, −y+2, −z. |
Experimental details
Crystal data | |
Chemical formula | C15H12N2OS |
Mr | 268.33 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 5.2668 (1), 13.0861 (2), 18.5373 (3) |
β (°) | 105.640 (1) |
V (Å3) | 1230.32 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.26 |
Crystal size (mm) | 0.39 × 0.22 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.907, 0.956 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 17425, 4470, 3657 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.758 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.108, 1.06 |
No. of reflections | 4470 |
No. of parameters | 172 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.48, −0.28 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1···N1i | 0.85 | 2.07 | 2.9099 (16) | 172 |
C13—H13A···O1ii | 0.95 | 2.52 | 3.1929 (19) | 128 |
Symmetry codes: (i) −x+2, −y+1, −z; (ii) −x+1, −y+2, −z. |
Acknowledgements
The authors would like to thank Universiti Sains Malaysia for a Research University Grant (No. 1001/PFIZIK/811160). BN also thanks UGC, New Delhi, and the Government of India for the purchase of chemicals through the SAP-DRS-Phase 1 programme.
References
Bruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In continuation of our work on synthesis of amides (Fun et al., 2010, 2011a, 2011b, 2012), we report herein the crystal structure of the title compound.
The molecular structure is shown in Fig. 1. Bond lengths are comparable to related structures (Fun et al., 2010, 2011a, 2011b, 2012). The naphthalene ring system (C6-C15, maximum deviation of 0.026 (1) Å at atom C6) forms a dihedral angle of 85.69 (6)° with the thiazol-2-yl ring (S1/N1/C1-C3, maximum deviation of 0.010 (1) Å at atom C3).
In the crystal structure, Fig. 2, molecules are linked via N2–H1···N1 and C13–H13A···O1 hydrogen bonds (Table 1) into one-dimensional chains along [110].