organic compounds
Methyl 2-(4-methoxy-3-nitrobenzamido)acetate
aCollege of Pharmacy, Henan University of Traditional Chinese Medicine, Zhengzhou, Henan 450008, People's Republic of China
*Correspondence e-mail: xerz2@126.com
The title compound, C11H12N2O6, crystallizes with two independent molecules in the which differ slightly in conformation. The dihedral angle between the amide O=C—N plane and the attached benzene ring is 19.5 (3)° in one molecule and 23.4 (3)° in the other. In the crystal, the two independent molecules are connected alternately by N—H⋯O hydrogen bonds, forming a chain along the a axis.
Related literature
For the biological activity of compounds with nitro and ester groups, see: Sykes et al. (1999). For a related structure, see: Wu et al. (2011).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2011); cell CrysAlis PRO; data reduction: CrysAlis RED (Agilent, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2.
Supporting information
https://doi.org/10.1107/S1600536812029522/is5151sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812029522/is5151Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812029522/is5151Isup3.cml
The title compound (0.25 mmol, 67.0 mg) was dissolved in water-methanol (1 ml / 2 ml v/v) mixture. Colorless block crystals were separated after several weeks.
N-bound H atoms were located in a difference Fourier map and refined freely with a bond-distance restraint of N—H = 0.86 (2) Å. C-bound H-atoms were included in calculated positions and treated as riding atoms, with C—H = 0.93, 0.96 and 0.98 Å for CH(aromatic), CH3 and CH(methine) H-atoms, respectively, and with Uiso(H)= k×Ueq(parent C-atom), where k = 1.5 for CH3 H-atoms and k = 1.2 for other H-atoms.
The nitro group and ester group are present in many bioactive compounds or be used as prodrug (Sykes et al., 1999). Here we report the
of C11H12N2O6, namely, methyl 2-(4-methoxy-3-nitrobenzamido)acetate. In the crystal of the title compound (Fig. 1), the carbonyl group and the adjacent amide group are connected by intermolecular N—H···O hydrogen bonds, forming a chain along the a axis (Fig. 2).For the biological activity of compounds with nitro and ester groups, see: Sykes et al. (1999). For a related structure, see: Wu et al. (2011).
Data collection: CrysAlis PRO (Agilent, 2011); cell
CrysAlis PRO (Agilent, 2011); data reduction: CrysAlis RED (Agilent, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).C11H12N2O6 | F(000) = 1120 |
Mr = 268.23 | Dx = 1.456 Mg m−3 |
Monoclinic, P21/c | Cu Kα radiation, λ = 1.54184 Å |
Hall symbol: -P 2ybc | Cell parameters from 3206 reflections |
a = 10.4378 (7) Å | θ = 3.2–67.0° |
b = 13.9110 (9) Å | µ = 1.03 mm−1 |
c = 17.5420 (15) Å | T = 291 K |
β = 106.146 (8)° | Block, colorless |
V = 2446.6 (3) Å3 | 0.28 × 0.26 × 0.24 mm |
Z = 8 |
Agilent Xcalibur Eos Gemini diffractometer | 4251 independent reflections |
Radiation source: fine-focus sealed tube | 3287 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ω scans | θmax = 67.0°, θmin = 4.1° |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | h = −12→12 |
Tmin = 0.760, Tmax = 0.789 | k = −16→16 |
10600 measured reflections | l = −20→15 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.052 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.155 | w = 1/[σ2(Fo2) + (0.073P)2 + 0.8379P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.004 |
4251 reflections | Δρmax = 0.50 e Å−3 |
356 parameters | Δρmin = −0.31 e Å−3 |
2 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.00093 (17) |
C11H12N2O6 | V = 2446.6 (3) Å3 |
Mr = 268.23 | Z = 8 |
Monoclinic, P21/c | Cu Kα radiation |
a = 10.4378 (7) Å | µ = 1.03 mm−1 |
b = 13.9110 (9) Å | T = 291 K |
c = 17.5420 (15) Å | 0.28 × 0.26 × 0.24 mm |
β = 106.146 (8)° |
Agilent Xcalibur Eos Gemini diffractometer | 4251 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | 3287 reflections with I > 2σ(I) |
Tmin = 0.760, Tmax = 0.789 | Rint = 0.026 |
10600 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 2 restraints |
wR(F2) = 0.155 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.50 e Å−3 |
4251 reflections | Δρmin = −0.31 e Å−3 |
356 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.7104 (2) | 0.31701 (14) | 0.29328 (12) | 0.0732 (6) | |
O1' | 0.18346 (19) | 1.11580 (13) | 0.30677 (12) | 0.0671 (5) | |
O2 | 0.9503 (2) | 0.31213 (17) | 0.3839 (2) | 0.1162 (11) | |
O2' | 0.4242 (2) | 1.12599 (15) | 0.40786 (18) | 0.0981 (9) | |
O3 | 1.0472 (2) | 0.44345 (17) | 0.41534 (18) | 0.1013 (9) | |
O3' | 0.5286 (2) | 0.99534 (16) | 0.41347 (19) | 0.1039 (9) | |
O4 | 0.58759 (15) | 0.72298 (13) | 0.42220 (11) | 0.0593 (5) | |
O4' | 0.09322 (15) | 0.69905 (12) | 0.43303 (11) | 0.0576 (5) | |
O5 | 0.7439 (2) | 0.90062 (15) | 0.34121 (12) | 0.0724 (6) | |
O5' | 0.2464 (2) | 0.54205 (14) | 0.32784 (11) | 0.0677 (5) | |
O6 | 0.82081 (18) | 0.99909 (13) | 0.44488 (13) | 0.0688 (5) | |
O6' | 0.33449 (16) | 0.43396 (11) | 0.42284 (11) | 0.0563 (4) | |
N1 | 0.9474 (2) | 0.39794 (16) | 0.38787 (13) | 0.0579 (5) | |
N1' | 0.4254 (2) | 1.04059 (14) | 0.39950 (14) | 0.0569 (5) | |
N2 | 0.80857 (19) | 0.74112 (15) | 0.44094 (13) | 0.0523 (5) | |
N2' | 0.31167 (18) | 0.68992 (14) | 0.43984 (12) | 0.0473 (5) | |
C1 | 0.7024 (2) | 0.40601 (18) | 0.32103 (14) | 0.0530 (6) | |
C1' | 0.1806 (2) | 1.02642 (16) | 0.33482 (14) | 0.0483 (5) | |
C2 | 0.8203 (2) | 0.44932 (17) | 0.36718 (13) | 0.0457 (5) | |
C2' | 0.3009 (2) | 0.98568 (16) | 0.38040 (14) | 0.0454 (5) | |
C3 | 0.8207 (2) | 0.54128 (17) | 0.39638 (13) | 0.0443 (5) | |
H3 | 0.9007 | 0.5688 | 0.4253 | 0.053* | |
C3' | 0.3080 (2) | 0.89318 (15) | 0.40887 (13) | 0.0432 (5) | |
H3' | 0.3896 | 0.8679 | 0.4377 | 0.052* | |
C4 | 0.7030 (2) | 0.59338 (17) | 0.38321 (13) | 0.0458 (5) | |
C4' | 0.1937 (2) | 0.83750 (16) | 0.39470 (13) | 0.0433 (5) | |
C5 | 0.5861 (2) | 0.55008 (19) | 0.33762 (15) | 0.0545 (6) | |
H5 | 0.5061 | 0.5836 | 0.3283 | 0.065* | |
C5' | 0.0740 (2) | 0.87772 (17) | 0.35111 (14) | 0.0486 (5) | |
H5' | −0.0038 | 0.8417 | 0.3423 | 0.058* | |
C6 | 0.5852 (2) | 0.45980 (19) | 0.30610 (16) | 0.0588 (7) | |
H6 | 0.5058 | 0.4342 | 0.2745 | 0.071* | |
C6' | 0.0668 (2) | 0.96912 (17) | 0.32055 (15) | 0.0530 (6) | |
H6' | −0.0146 | 0.9930 | 0.2901 | 0.064* | |
C7 | 0.6947 (2) | 0.69072 (17) | 0.41681 (13) | 0.0464 (5) | |
C7' | 0.1950 (2) | 0.73673 (16) | 0.42440 (13) | 0.0426 (5) | |
C8 | 0.8122 (3) | 0.83675 (19) | 0.47275 (15) | 0.0569 (6) | |
H8A | 0.8988 | 0.8474 | 0.5103 | 0.068* | |
H8B | 0.7455 | 0.8418 | 0.5015 | 0.068* | |
C8' | 0.3254 (2) | 0.59067 (16) | 0.46412 (14) | 0.0495 (6) | |
H8'A | 0.2655 | 0.5777 | 0.4964 | 0.059* | |
H8'B | 0.4158 | 0.5799 | 0.4969 | 0.059* | |
C9 | 0.7875 (2) | 0.91368 (18) | 0.41080 (17) | 0.0528 (6) | |
C9' | 0.2959 (2) | 0.52156 (16) | 0.39587 (14) | 0.0458 (5) | |
C10 | 0.7937 (3) | 1.0825 (2) | 0.3943 (2) | 0.0863 (10) | |
H10D | 0.8540 | 1.1333 | 0.4180 | 0.130* | |
H10E | 0.7036 | 1.1033 | 0.3878 | 0.130* | |
H10F | 0.8055 | 1.0667 | 0.3434 | 0.130* | |
C10' | 0.3005 (3) | 0.3553 (2) | 0.3677 (2) | 0.0757 (9) | |
H10A | 0.3653 | 0.3050 | 0.3839 | 0.114* | |
H10B | 0.2997 | 0.3773 | 0.3156 | 0.114* | |
H10C | 0.2138 | 0.3312 | 0.3666 | 0.114* | |
C11 | 0.5910 (4) | 0.2707 (2) | 0.2494 (2) | 0.0936 (11) | |
H11D | 0.5337 | 0.2608 | 0.2831 | 0.140* | |
H11E | 0.6125 | 0.2098 | 0.2304 | 0.140* | |
H11F | 0.5463 | 0.3103 | 0.2052 | 0.140* | |
C11' | 0.0631 (3) | 1.1560 (2) | 0.25777 (19) | 0.0801 (9) | |
H11A | −0.0002 | 1.1630 | 0.2880 | 0.120* | |
H11B | 0.0270 | 1.1143 | 0.2134 | 0.120* | |
H11C | 0.0814 | 1.2179 | 0.2389 | 0.120* | |
H2' | 0.3781 (19) | 0.7135 (17) | 0.4293 (14) | 0.049 (7)* | |
H2 | 0.8799 (19) | 0.7210 (17) | 0.4351 (15) | 0.049 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0720 (12) | 0.0635 (12) | 0.0763 (13) | −0.0131 (10) | 0.0076 (10) | −0.0211 (10) |
O1' | 0.0693 (11) | 0.0466 (10) | 0.0737 (12) | 0.0043 (9) | 0.0004 (9) | 0.0127 (9) |
O2 | 0.0815 (16) | 0.0625 (14) | 0.180 (3) | 0.0145 (12) | −0.0038 (17) | −0.0290 (16) |
O2' | 0.0691 (13) | 0.0446 (12) | 0.163 (2) | −0.0081 (10) | 0.0032 (14) | 0.0035 (13) |
O3 | 0.0439 (11) | 0.0780 (15) | 0.173 (3) | 0.0028 (10) | 0.0148 (13) | −0.0273 (16) |
O3' | 0.0447 (11) | 0.0661 (14) | 0.199 (3) | −0.0027 (10) | 0.0301 (14) | 0.0091 (15) |
O4 | 0.0399 (8) | 0.0660 (11) | 0.0736 (11) | 0.0104 (8) | 0.0183 (8) | 0.0060 (9) |
O4' | 0.0395 (8) | 0.0518 (10) | 0.0837 (12) | −0.0066 (7) | 0.0210 (8) | 0.0000 (9) |
O5 | 0.0894 (14) | 0.0647 (12) | 0.0632 (12) | −0.0003 (11) | 0.0215 (11) | −0.0005 (9) |
O5' | 0.0811 (13) | 0.0605 (11) | 0.0553 (11) | 0.0090 (10) | 0.0086 (10) | 0.0041 (9) |
O6 | 0.0583 (10) | 0.0522 (11) | 0.0941 (14) | −0.0040 (8) | 0.0180 (10) | −0.0118 (10) |
O6' | 0.0528 (9) | 0.0393 (9) | 0.0741 (11) | 0.0058 (7) | 0.0132 (8) | 0.0056 (8) |
N1 | 0.0502 (12) | 0.0539 (13) | 0.0684 (13) | 0.0031 (10) | 0.0143 (10) | −0.0125 (10) |
N1' | 0.0493 (11) | 0.0408 (11) | 0.0788 (15) | −0.0036 (9) | 0.0149 (10) | 0.0020 (10) |
N2 | 0.0395 (10) | 0.0490 (12) | 0.0679 (13) | 0.0062 (9) | 0.0140 (9) | −0.0024 (10) |
N2' | 0.0375 (9) | 0.0394 (10) | 0.0666 (13) | −0.0009 (8) | 0.0168 (9) | 0.0045 (9) |
C1 | 0.0555 (14) | 0.0541 (14) | 0.0476 (13) | −0.0105 (11) | 0.0112 (11) | −0.0020 (11) |
C1' | 0.0517 (13) | 0.0397 (12) | 0.0506 (13) | 0.0065 (10) | 0.0095 (10) | −0.0031 (10) |
C2 | 0.0425 (11) | 0.0498 (13) | 0.0456 (12) | −0.0012 (10) | 0.0137 (10) | 0.0001 (10) |
C2' | 0.0402 (11) | 0.0408 (12) | 0.0546 (13) | −0.0012 (9) | 0.0120 (10) | −0.0048 (10) |
C3 | 0.0367 (10) | 0.0510 (13) | 0.0449 (12) | −0.0048 (9) | 0.0110 (9) | 0.0004 (10) |
C3' | 0.0352 (10) | 0.0391 (11) | 0.0519 (12) | 0.0022 (9) | 0.0066 (9) | −0.0029 (9) |
C4 | 0.0374 (11) | 0.0491 (13) | 0.0504 (12) | −0.0006 (9) | 0.0113 (9) | 0.0100 (10) |
C4' | 0.0379 (11) | 0.0395 (11) | 0.0515 (12) | 0.0002 (9) | 0.0109 (9) | −0.0070 (10) |
C5 | 0.0384 (12) | 0.0568 (15) | 0.0643 (15) | 0.0003 (10) | 0.0077 (11) | 0.0135 (12) |
C5' | 0.0364 (11) | 0.0449 (12) | 0.0614 (14) | 0.0004 (9) | 0.0087 (10) | −0.0089 (10) |
C6 | 0.0425 (12) | 0.0654 (16) | 0.0598 (15) | −0.0136 (11) | −0.0003 (11) | 0.0053 (13) |
C6' | 0.0397 (11) | 0.0505 (14) | 0.0610 (14) | 0.0076 (10) | 0.0011 (10) | −0.0072 (11) |
C7 | 0.0382 (11) | 0.0536 (13) | 0.0471 (12) | 0.0056 (10) | 0.0116 (9) | 0.0109 (10) |
C7' | 0.0351 (10) | 0.0414 (12) | 0.0504 (12) | −0.0035 (9) | 0.0107 (9) | −0.0060 (9) |
C8 | 0.0499 (13) | 0.0579 (15) | 0.0592 (15) | 0.0042 (11) | 0.0090 (11) | −0.0081 (12) |
C8' | 0.0456 (12) | 0.0432 (12) | 0.0568 (14) | 0.0009 (10) | 0.0096 (10) | 0.0064 (10) |
C9 | 0.0385 (11) | 0.0514 (14) | 0.0693 (17) | 0.0001 (10) | 0.0162 (11) | −0.0076 (12) |
C9' | 0.0349 (10) | 0.0453 (12) | 0.0553 (14) | 0.0019 (9) | 0.0096 (10) | 0.0067 (10) |
C10 | 0.088 (2) | 0.0523 (17) | 0.130 (3) | −0.0070 (16) | 0.050 (2) | 0.0034 (18) |
C10' | 0.082 (2) | 0.0484 (15) | 0.103 (2) | −0.0009 (14) | 0.0353 (18) | −0.0128 (15) |
C11 | 0.092 (2) | 0.074 (2) | 0.101 (3) | −0.0303 (18) | 0.005 (2) | −0.0312 (19) |
C11' | 0.091 (2) | 0.0580 (17) | 0.0742 (19) | 0.0170 (16) | −0.0049 (17) | 0.0139 (14) |
O1—C1 | 1.341 (3) | C3—H3 | 0.9300 |
O1—C11 | 1.424 (3) | C3'—C4' | 1.385 (3) |
O1'—C1' | 1.340 (3) | C3'—H3' | 0.9300 |
O1'—C11' | 1.424 (3) | C4—C5 | 1.396 (3) |
O2—N1 | 1.197 (3) | C4—C7 | 1.489 (3) |
O2'—N1' | 1.197 (3) | C4'—C5' | 1.389 (3) |
O3—N1 | 1.200 (3) | C4'—C7' | 1.494 (3) |
O3'—N1' | 1.213 (3) | C5—C6 | 1.371 (4) |
O4—C7 | 1.233 (3) | C5—H5 | 0.9300 |
O4'—C7' | 1.231 (2) | C5'—C6' | 1.374 (3) |
O5—C9 | 1.192 (3) | C5'—H5' | 0.9300 |
O5'—C9' | 1.195 (3) | C6—H6 | 0.9300 |
O6—C9 | 1.332 (3) | C6'—H6' | 0.9300 |
O6—C10 | 1.440 (4) | C8—C9 | 1.496 (4) |
O6'—C9' | 1.328 (3) | C8—H8A | 0.9700 |
O6'—C10' | 1.438 (3) | C8—H8B | 0.9700 |
N1—C2 | 1.461 (3) | C8'—C9' | 1.499 (3) |
N1'—C2' | 1.463 (3) | C8'—H8'A | 0.9700 |
N2—C7 | 1.343 (3) | C8'—H8'B | 0.9700 |
N2—C8 | 1.439 (3) | C10—H10D | 0.9600 |
N2—H2 | 0.828 (16) | C10—H10E | 0.9600 |
N2'—C7' | 1.341 (3) | C10—H10F | 0.9600 |
N2'—C8' | 1.440 (3) | C10'—H10A | 0.9600 |
N2'—H2' | 0.833 (16) | C10'—H10B | 0.9600 |
C1—C6 | 1.395 (4) | C10'—H10C | 0.9600 |
C1—C2 | 1.407 (3) | C11—H11D | 0.9600 |
C1'—C6' | 1.394 (3) | C11—H11E | 0.9600 |
C1'—C2' | 1.407 (3) | C11—H11F | 0.9600 |
C2—C3 | 1.378 (3) | C11'—H11A | 0.9600 |
C2'—C3' | 1.375 (3) | C11'—H11B | 0.9600 |
C3—C4 | 1.389 (3) | C11'—H11C | 0.9600 |
C1—O1—C11 | 118.7 (2) | C5'—C6'—H6' | 119.7 |
C1'—O1'—C11' | 118.7 (2) | C1'—C6'—H6' | 119.7 |
C9—O6—C10 | 117.4 (2) | O4—C7—N2 | 121.9 (2) |
C9'—O6'—C10' | 117.7 (2) | O4—C7—C4 | 121.0 (2) |
O2—N1—O3 | 121.1 (2) | N2—C7—C4 | 117.11 (19) |
O2—N1—C2 | 120.6 (2) | O4'—C7'—N2' | 122.3 (2) |
O3—N1—C2 | 118.0 (2) | O4'—C7'—C4' | 121.19 (19) |
O2'—N1'—O3' | 121.9 (2) | N2'—C7'—C4' | 116.47 (18) |
O2'—N1'—C2' | 120.5 (2) | N2—C8—C9 | 113.5 (2) |
O3'—N1'—C2' | 117.2 (2) | N2—C8—H8A | 108.9 |
C7—N2—C8 | 122.0 (2) | C9—C8—H8A | 108.9 |
C7—N2—H2 | 122.2 (18) | N2—C8—H8B | 108.9 |
C8—N2—H2 | 115.6 (18) | C9—C8—H8B | 108.9 |
C7'—N2'—C8' | 122.38 (19) | H8A—C8—H8B | 107.7 |
C7'—N2'—H2' | 122.0 (17) | N2'—C8'—C9' | 113.4 (2) |
C8'—N2'—H2' | 115.0 (17) | N2'—C8'—H8'A | 108.9 |
O1—C1—C6 | 124.5 (2) | C9'—C8'—H8'A | 108.9 |
O1—C1—C2 | 118.1 (2) | N2'—C8'—H8'B | 108.9 |
C6—C1—C2 | 117.4 (2) | C9'—C8'—H8'B | 108.9 |
O1'—C1'—C6' | 124.7 (2) | H8'A—C8'—H8'B | 107.7 |
O1'—C1'—C2' | 118.3 (2) | O5—C9—O6 | 125.0 (3) |
C6'—C1'—C2' | 116.9 (2) | O5—C9—C8 | 125.1 (2) |
C3—C2—C1 | 121.5 (2) | O6—C9—C8 | 110.0 (2) |
C3—C2—N1 | 117.0 (2) | O5'—C9'—O6' | 125.3 (2) |
C1—C2—N1 | 121.5 (2) | O5'—C9'—C8' | 125.5 (2) |
C3'—C2'—C1' | 122.2 (2) | O6'—C9'—C8' | 109.2 (2) |
C3'—C2'—N1' | 116.83 (19) | O6—C10—H10D | 109.5 |
C1'—C2'—N1' | 121.0 (2) | O6—C10—H10E | 109.5 |
C2—C3—C4 | 120.8 (2) | H10D—C10—H10E | 109.5 |
C2—C3—H3 | 119.6 | O6—C10—H10F | 109.5 |
C4—C3—H3 | 119.6 | H10D—C10—H10F | 109.5 |
C2'—C3'—C4' | 120.1 (2) | H10E—C10—H10F | 109.5 |
C2'—C3'—H3' | 119.9 | O6'—C10'—H10A | 109.5 |
C4'—C3'—H3' | 119.9 | O6'—C10'—H10B | 109.5 |
C3—C4—C5 | 117.5 (2) | H10A—C10'—H10B | 109.5 |
C3—C4—C7 | 123.7 (2) | O6'—C10'—H10C | 109.5 |
C5—C4—C7 | 118.8 (2) | H10A—C10'—H10C | 109.5 |
C3'—C4'—C5' | 118.1 (2) | H10B—C10'—H10C | 109.5 |
C3'—C4'—C7' | 122.56 (19) | O1—C11—H11D | 109.5 |
C5'—C4'—C7' | 119.31 (19) | O1—C11—H11E | 109.5 |
C6—C5—C4 | 122.2 (2) | H11D—C11—H11E | 109.5 |
C6—C5—H5 | 118.9 | O1—C11—H11F | 109.5 |
C4—C5—H5 | 118.9 | H11D—C11—H11F | 109.5 |
C6'—C5'—C4' | 122.0 (2) | H11E—C11—H11F | 109.5 |
C6'—C5'—H5' | 119.0 | O1'—C11'—H11A | 109.5 |
C4'—C5'—H5' | 119.0 | O1'—C11'—H11B | 109.5 |
C5—C6—C1 | 120.5 (2) | H11A—C11'—H11B | 109.5 |
C5—C6—H6 | 119.7 | O1'—C11'—H11C | 109.5 |
C1—C6—H6 | 119.7 | H11A—C11'—H11C | 109.5 |
C5'—C6'—C1' | 120.5 (2) | H11B—C11'—H11C | 109.5 |
C11—O1—C1—C6 | −3.9 (4) | C3'—C4'—C5'—C6' | 1.6 (3) |
C11—O1—C1—C2 | 177.3 (3) | C7'—C4'—C5'—C6' | −178.4 (2) |
C11'—O1'—C1'—C6' | −1.0 (4) | C4—C5—C6—C1 | 2.2 (4) |
C11'—O1'—C1'—C2' | 177.4 (2) | O1—C1—C6—C5 | 179.4 (2) |
O1—C1—C2—C3 | 178.6 (2) | C2—C1—C6—C5 | −1.9 (4) |
C6—C1—C2—C3 | −0.2 (3) | C4'—C5'—C6'—C1' | −2.2 (4) |
O1—C1—C2—N1 | −2.8 (3) | O1'—C1'—C6'—C5' | 179.2 (2) |
C6—C1—C2—N1 | 178.3 (2) | C2'—C1'—C6'—C5' | 0.9 (4) |
O2—N1—C2—C3 | 159.7 (3) | C8—N2—C7—O4 | −1.6 (4) |
O3—N1—C2—C3 | −13.9 (4) | C8—N2—C7—C4 | 178.6 (2) |
O2—N1—C2—C1 | −18.9 (4) | C3—C4—C7—O4 | −160.1 (2) |
O3—N1—C2—C1 | 167.5 (3) | C5—C4—C7—O4 | 18.0 (3) |
O1'—C1'—C2'—C3' | −177.4 (2) | C3—C4—C7—N2 | 19.8 (3) |
C6'—C1'—C2'—C3' | 1.0 (3) | C5—C4—C7—N2 | −162.1 (2) |
O1'—C1'—C2'—N1' | 2.4 (3) | C8'—N2'—C7'—O4' | 3.0 (4) |
C6'—C1'—C2'—N1' | −179.1 (2) | C8'—N2'—C7'—C4' | −176.1 (2) |
O2'—N1'—C2'—C3' | −148.6 (3) | C3'—C4'—C7'—O4' | 157.6 (2) |
O3'—N1'—C2'—C3' | 24.8 (4) | C5'—C4'—C7'—O4' | −22.4 (3) |
O2'—N1'—C2'—C1' | 31.6 (4) | C3'—C4'—C7'—N2' | −23.3 (3) |
O3'—N1'—C2'—C1' | −155.0 (3) | C5'—C4'—C7'—N2' | 156.7 (2) |
C1—C2—C3—C4 | 2.1 (3) | C7—N2—C8—C9 | −88.1 (3) |
N1—C2—C3—C4 | −176.5 (2) | C7'—N2'—C8'—C9' | 87.3 (3) |
C1'—C2'—C3'—C4' | −1.6 (4) | C10—O6—C9—O5 | 4.3 (4) |
N1'—C2'—C3'—C4' | 178.5 (2) | C10—O6—C9—C8 | −175.3 (2) |
C2—C3—C4—C5 | −1.8 (3) | N2—C8—C9—O5 | 13.9 (4) |
C2—C3—C4—C7 | 176.4 (2) | N2—C8—C9—O6 | −166.5 (2) |
C2'—C3'—C4'—C5' | 0.3 (3) | C10'—O6'—C9'—O5' | −7.6 (4) |
C2'—C3'—C4'—C7' | −179.7 (2) | C10'—O6'—C9'—C8' | 172.9 (2) |
C3—C4—C5—C6 | −0.3 (4) | N2'—C8'—C9'—O5' | −10.9 (3) |
C7—C4—C5—C6 | −178.6 (2) | N2'—C8'—C9'—O6' | 168.53 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4′i | 0.83 (2) | 2.26 (2) | 3.069 (2) | 167 (2) |
N2′—H2′···O4 | 0.83 (2) | 2.23 (2) | 3.016 (2) | 158 (2) |
Symmetry code: (i) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C11H12N2O6 |
Mr | 268.23 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 291 |
a, b, c (Å) | 10.4378 (7), 13.9110 (9), 17.5420 (15) |
β (°) | 106.146 (8) |
V (Å3) | 2446.6 (3) |
Z | 8 |
Radiation type | Cu Kα |
µ (mm−1) | 1.03 |
Crystal size (mm) | 0.28 × 0.26 × 0.24 |
Data collection | |
Diffractometer | Agilent Xcalibur Eos Gemini |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2011) |
Tmin, Tmax | 0.760, 0.789 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10600, 4251, 3287 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.155, 1.04 |
No. of reflections | 4251 |
No. of parameters | 356 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.50, −0.31 |
Computer programs: CrysAlis PRO (Agilent, 2011), CrysAlis RED (Agilent, 2011), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), OLEX2 (Dolomanov et al., 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4'i | 0.828 (16) | 2.258 (17) | 3.069 (2) | 167 (2) |
N2'—H2'···O4 | 0.833 (16) | 2.229 (18) | 3.016 (2) | 158 (2) |
Symmetry code: (i) x+1, y, z. |
Acknowledgements
The authors thank Henan University of Traditional Chinese Medicine for supporting this study.
References
Agilent (2011). CrysAlis PRO and CrysAlis RED. Agilent Technologies Ltd, Yarnton, England. Google Scholar
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sykes, B. M., Atwell, G. J., Hogg, A., Wilson, W. R., O'Connor, C. J. & Denny, W. A. (1999). J. Med. Chem. 42, 346–355. Web of Science CrossRef CAS PubMed Google Scholar
Wu, X.-X., Wu, X.-F., Hou, Y.-M., Ng, S. W. & Tiekink, E. R. T. (2011). Acta Cryst. E67, o3486. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The nitro group and ester group are present in many bioactive compounds or be used as prodrug (Sykes et al., 1999). Here we report the crystal structure of C11H12N2O6, namely, methyl 2-(4-methoxy-3-nitrobenzamido)acetate. In the crystal of the title compound (Fig. 1), the carbonyl group and the adjacent amide group are connected by intermolecular N—H···O hydrogen bonds, forming a chain along the a axis (Fig. 2).