metal-organic compounds
(2,2′-Bipyridine-κ2N,N′)bis(4-formylbenzoato-κO1)copper(II)
aCenter of Applied Solid State Chemistry Research, Ningbo University, Ningbo, Zhejiang 315211, People's Republic of China
*Correspondence e-mail: xuwei@nbu.edu.cn
The title mononuclear CuII complex, [Cu(C8H5O3)2(C10H8N2)], is comprised of a CuII cation, two 4-formylbenzoate (L−) ligands and a 2,2′-bipyridine (bipy) ligand. The CuII ion and bipy ligand lie on a crystallographic twofold rotation axis; the CuII ion is coordinated by two N atoms from one bipy ligand and two O atoms from two different carboxylate groups of two L− ligands, exhibiting effectively a distorted square-planar geometry. The complex molecules are interlinked to generate two-dimensional supramolecular layers in the ab plane, formed by C—H⋯O hydrogen bonds, where the O acceptor is the O atom from the carboxylate group not involved in coordination to the CuII ion. The two-dimensional layers are stacked in a sequence via C—H⋯O hydrogen-bonding interactions where the formyl O atom acts as acceptor.
Related literature
For general background on the use of transition metal complexes containing carboxylate ligands and secondary building units, see: Sun et al. (2002); Liu et al. (2006); Xu et al. (2011). For related structures using the same metal, similar ligands and with a similar coordination environment, see: Li et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: RAPID-AUTO (Rigaku, 1998); cell RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536812031066/nk2165sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812031066/nk2165Isup2.hkl
1 mL (1M) NaOH was added to an aqueous solution of CuCl2.2H2O (0.0852 g, 0.5 mmol) and Cl- anions were removed by repeated centrifugation with NaOH, then 5.0 ml H2O and 5.0 ml EtOH were subsequently added. The blue suspension above was added to an aqueous ethanol solution (5.0 ml and 5.0 ml) of 4-formylbenzoic acid (0.1501 g, 1.0 mmol), then another aqueous ethanol solution (5.0 ml and 5.0 ml) of 2,2'-bipyridine (0.0782 g, 0.5 mmol) was added and stirred continuously for 1 h to give another blue suspension. After filtration, the blue filtrate (pH = 4.8) was allowed to evaporate at room temperature for one week to give dark blue plate-shaped crystals.
H atoms bonded to C atoms were placed in geometrically calculated position and were refined using a riding model, with Uiso(H) = 1.2 Ueq(C). After
there still remains one large residual peak 1.16 e.Å-3 high and located 2.36 Å from H10A. This was initially postulated as partly occupied water. However, the TG-DTA curve of the title complex shows no removal of a water molecula in the weight loss progress. We believe that the residual peak may be an artifact of poor crystal quality.Transition metal complexes with
using various secondary building units (SBUs) frequently show interesting physical, chemical and/or biological properties (Sun et al., 2002, Li et al., 2007, Liu et al., 2006). Herein, we are interested in selfassemblies of Cu2+ ions and 2,2'-bipydine (bipy) with 4-formylbenzoate, which led to the preparation of [Cu(C10H8N2)(C8H5O3)2].The
contains a half CuII cation, a half bipy ligand and one 4-formylbenzoate (L- = p-CHO-C6H4COO-) ligand. Both the CuII ion and bipy ligand lie on a crystallographic twofold rotation axis. In the complex, two crystallographically equivalent L- anions function as monodentate ligands, while one bipy molecular functions as a terminal ligand adopting an expected chelating mode to coordinate with one CuII ion, forming a mononuclear unit. The CuII ion is coordinated by two nitrogen atoms (N and N#1, #1 = 1 - x, y, 1.5 - z) of one bipy ligand and two oxygen atoms (O1, O1#1) from two different carboxylic groups of two L- ligands exhibiting essentially distorted square planar geometry (Fig.1). The Cu–N/O bonds in the quadrilateral plane are 1.984 (3) and 1.934 (3) Å, respectively. The cisoid bond angles fall in the region 80.9 (1)–93.8 (1) °, and transoid ones are both equal to 170.2 (1) °, exhibiting substantial deviations from 90 and 180 ° for a quadrate. In comparison with literatures, the above bonding values are normal (Li et al., 2007).The complex molecules are linked via weak C4–H4···O2#2 (#2 = -0.5 + x, -0.5 + y, z) hydrogen bonds to generate two-dimensional supramolecular layers in the ab plane. Along [001] direction the two-dimensional layers are stacked in a sequence ···ABABA··· and further connected via C13–H13···O3#3 (#3 = 0.5 + x, 0.5 - y, -0.5 + z) hydrogen bonds form three-dimensional supramolecular structure.
For general background on the use of transition metal complexes containing carboxylate ligands and secondary building units, see: Sun et al. (2002); Liu et al. (2006); Xu et al. (2011). For related structures using the same metal, similar ligands and with a similar coordination environment, see: Li et al. (2007).
Data collection: RAPID-AUTO (Rigaku, 1998); cell
RAPID-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Cu(C8H5O3)2(C10H8N2)] | F(000) = 1060 |
Mr = 517.96 | Dx = 1.459 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 11333 reflections |
a = 11.923 (2) Å | θ = 3.2–27.4° |
b = 10.992 (2) Å | µ = 0.97 mm−1 |
c = 18.275 (4) Å | T = 295 K |
β = 100.11 (3)° | Block, blue |
V = 2357.9 (8) Å3 | 0.23 × 0.17 × 0.08 mm |
Z = 4 |
Rigaku R-AXIS RAPID diffractometer | 2700 independent reflections |
Radiation source: fine-focus sealed tube | 1672 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.067 |
ω scans | θmax = 27.4°, θmin = 3.2° |
Absorption correction: empirical (using intensity measurements) (ABSCOR; Higashi, 1995) | h = −15→15 |
Tmin = 0.820, Tmax = 0.925 | k = −14→14 |
11333 measured reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.058 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.146 | H-atom parameters constrained |
S = 1.23 | w = 1/[σ2(Fo2) + (0.050P)2 + 1.7765P] where P = (Fo2 + 2Fc2)/3 |
2698 reflections | (Δ/σ)max < 0.001 |
159 parameters | Δρmax = 1.16 e Å−3 |
0 restraints | Δρmin = −0.50 e Å−3 |
[Cu(C8H5O3)2(C10H8N2)] | V = 2357.9 (8) Å3 |
Mr = 517.96 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 11.923 (2) Å | µ = 0.97 mm−1 |
b = 10.992 (2) Å | T = 295 K |
c = 18.275 (4) Å | 0.23 × 0.17 × 0.08 mm |
β = 100.11 (3)° |
Rigaku R-AXIS RAPID diffractometer | 2700 independent reflections |
Absorption correction: empirical (using intensity measurements) (ABSCOR; Higashi, 1995) | 1672 reflections with I > 2σ(I) |
Tmin = 0.820, Tmax = 0.925 | Rint = 0.067 |
11333 measured reflections |
R[F2 > 2σ(F2)] = 0.058 | 0 restraints |
wR(F2) = 0.146 | H-atom parameters constrained |
S = 1.23 | Δρmax = 1.16 e Å−3 |
2698 reflections | Δρmin = −0.50 e Å−3 |
159 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu | 0.5000 | 0.53295 (6) | 0.7500 | 0.0500 (3) | |
O1 | 0.4216 (2) | 0.4112 (2) | 0.79856 (15) | 0.0620 (7) | |
O2 | 0.5705 (2) | 0.4465 (3) | 0.88645 (15) | 0.0660 (8) | |
O3 | 0.3550 (4) | −0.0045 (4) | 1.1014 (2) | 0.1132 (14) | |
C1 | 0.4812 (3) | 0.3924 (3) | 0.8630 (2) | 0.0505 (9) | |
C2 | 0.4358 (3) | 0.2966 (3) | 0.9090 (2) | 0.0496 (9) | |
C3 | 0.3319 (3) | 0.2404 (3) | 0.8846 (2) | 0.0571 (10) | |
H3A | 0.2888 | 0.2623 | 0.8391 | 0.069* | |
C4 | 0.2918 (4) | 0.1529 (3) | 0.9271 (2) | 0.0606 (11) | |
H4A | 0.2221 | 0.1158 | 0.9099 | 0.073* | |
C5 | 0.3537 (4) | 0.1197 (4) | 0.9947 (2) | 0.0597 (10) | |
C6 | 0.4576 (4) | 0.1749 (5) | 1.0194 (3) | 0.0834 (15) | |
H6A | 0.5006 | 0.1522 | 1.0648 | 0.100* | |
C7 | 0.4980 (4) | 0.2632 (4) | 0.9774 (2) | 0.0752 (13) | |
H7A | 0.5674 | 0.3007 | 0.9950 | 0.090* | |
C8 | 0.3097 (5) | 0.0272 (4) | 1.0403 (3) | 0.0819 (14) | |
H8A | 0.2411 | −0.0099 | 1.0203 | 0.098* | |
N | 0.5875 (3) | 0.6702 (3) | 0.71745 (17) | 0.0516 (8) | |
C9 | 0.5513 (3) | 0.7822 (3) | 0.73221 (19) | 0.0499 (9) | |
C10 | 0.6077 (3) | 0.8850 (4) | 0.7152 (2) | 0.0607 (11) | |
H10A | 0.5824 | 0.9618 | 0.7261 | 0.073* | |
C11 | 0.7018 (4) | 0.8726 (4) | 0.6819 (2) | 0.0677 (12) | |
H11A | 0.7411 | 0.9411 | 0.6704 | 0.081* | |
C12 | 0.7375 (4) | 0.7592 (5) | 0.6655 (2) | 0.0700 (12) | |
H12A | 0.8003 | 0.7493 | 0.6422 | 0.084* | |
C13 | 0.6783 (3) | 0.6600 (4) | 0.6844 (2) | 0.0619 (11) | |
H13A | 0.7025 | 0.5827 | 0.6737 | 0.074* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu | 0.0473 (4) | 0.0495 (4) | 0.0548 (4) | 0.000 | 0.0132 (3) | 0.000 |
O1 | 0.0622 (17) | 0.0604 (16) | 0.0625 (17) | −0.0078 (14) | 0.0083 (15) | 0.0070 (14) |
O2 | 0.0510 (16) | 0.077 (2) | 0.0706 (18) | −0.0208 (15) | 0.0118 (14) | −0.0027 (15) |
O3 | 0.122 (3) | 0.123 (3) | 0.102 (3) | −0.006 (3) | 0.040 (3) | 0.049 (2) |
C1 | 0.052 (2) | 0.049 (2) | 0.054 (2) | 0.0002 (19) | 0.0201 (19) | −0.0042 (18) |
C2 | 0.050 (2) | 0.050 (2) | 0.051 (2) | −0.0035 (18) | 0.0131 (18) | −0.0029 (17) |
C3 | 0.059 (2) | 0.058 (2) | 0.053 (2) | −0.010 (2) | 0.0038 (19) | −0.0009 (19) |
C4 | 0.063 (3) | 0.057 (2) | 0.064 (3) | −0.020 (2) | 0.015 (2) | −0.009 (2) |
C5 | 0.066 (3) | 0.054 (2) | 0.063 (2) | −0.003 (2) | 0.023 (2) | 0.002 (2) |
C6 | 0.076 (3) | 0.107 (4) | 0.065 (3) | −0.012 (3) | 0.005 (2) | 0.027 (3) |
C7 | 0.060 (3) | 0.095 (3) | 0.066 (3) | −0.023 (3) | 0.001 (2) | 0.011 (3) |
C8 | 0.093 (4) | 0.078 (3) | 0.083 (3) | −0.010 (3) | 0.037 (3) | 0.009 (3) |
N | 0.0466 (18) | 0.0563 (18) | 0.0545 (18) | 0.0012 (15) | 0.0155 (15) | −0.0035 (15) |
C9 | 0.048 (2) | 0.054 (2) | 0.047 (2) | −0.0013 (18) | 0.0053 (17) | 0.0018 (17) |
C10 | 0.060 (3) | 0.053 (2) | 0.068 (3) | −0.007 (2) | 0.007 (2) | 0.007 (2) |
C11 | 0.063 (3) | 0.073 (3) | 0.066 (3) | −0.021 (2) | 0.010 (2) | 0.016 (2) |
C12 | 0.056 (3) | 0.092 (3) | 0.066 (3) | −0.015 (3) | 0.021 (2) | 0.001 (3) |
C13 | 0.056 (2) | 0.070 (3) | 0.063 (2) | −0.004 (2) | 0.022 (2) | −0.007 (2) |
Cu—O1i | 1.935 (3) | C6—C7 | 1.376 (6) |
Cu—O1 | 1.935 (3) | C6—H6A | 0.9300 |
Cu—N | 1.984 (3) | C7—H7A | 0.9300 |
Cu—Ni | 1.984 (3) | C8—H8A | 0.9300 |
O1—C1 | 1.282 (4) | N—C13 | 1.334 (5) |
O2—C1 | 1.229 (4) | N—C9 | 1.347 (4) |
O3—C8 | 1.203 (6) | C9—C10 | 1.378 (5) |
C1—C2 | 1.505 (5) | C9—C9i | 1.482 (7) |
C2—C3 | 1.386 (5) | C10—C11 | 1.374 (6) |
C2—C7 | 1.386 (5) | C10—H10A | 0.9300 |
C3—C4 | 1.374 (5) | C11—C12 | 1.367 (6) |
C3—H3A | 0.9300 | C11—H11A | 0.9300 |
C4—C5 | 1.373 (5) | C12—C13 | 1.375 (6) |
C4—H4A | 0.9300 | C12—H12A | 0.9300 |
C5—C6 | 1.382 (6) | C13—H13A | 0.9300 |
C5—C8 | 1.469 (6) | ||
O1i—Cu—O1 | 92.48 (17) | C6—C7—C2 | 120.4 (4) |
O1i—Cu—N | 93.83 (12) | C6—C7—H7A | 119.8 |
O1—Cu—N | 170.15 (12) | C2—C7—H7A | 119.8 |
O1i—Cu—Ni | 170.15 (12) | O3—C8—C5 | 125.5 (5) |
O1—Cu—Ni | 93.83 (12) | O3—C8—H8A | 117.3 |
N—Cu—Ni | 80.96 (18) | C5—C8—H8A | 117.3 |
C1—O1—Cu | 107.4 (2) | C13—N—C9 | 118.8 (3) |
O2—C1—O1 | 123.3 (4) | C13—N—Cu | 125.7 (3) |
O2—C1—C2 | 121.3 (4) | C9—N—Cu | 115.5 (3) |
O1—C1—C2 | 115.5 (3) | N—C9—C10 | 121.2 (4) |
C3—C2—C7 | 118.6 (4) | N—C9—C9i | 113.9 (2) |
C3—C2—C1 | 121.4 (3) | C10—C9—C9i | 124.9 (2) |
C7—C2—C1 | 120.0 (3) | C11—C10—C9 | 119.2 (4) |
C4—C3—C2 | 120.7 (4) | C11—C10—H10A | 120.4 |
C4—C3—H3A | 119.6 | C9—C10—H10A | 120.4 |
C2—C3—H3A | 119.6 | C12—C11—C10 | 119.8 (4) |
C5—C4—C3 | 120.6 (4) | C12—C11—H11A | 120.1 |
C5—C4—H4A | 119.7 | C10—C11—H11A | 120.1 |
C3—C4—H4A | 119.7 | C11—C12—C13 | 118.3 (4) |
C4—C5—C6 | 119.1 (4) | C11—C12—H12A | 120.8 |
C4—C5—C8 | 120.4 (4) | C13—C12—H12A | 120.8 |
C6—C5—C8 | 120.5 (4) | N—C13—C12 | 122.7 (4) |
C7—C6—C5 | 120.6 (4) | N—C13—H13A | 118.6 |
C7—C6—H6A | 119.7 | C12—C13—H13A | 118.6 |
C5—C6—H6A | 119.7 |
Symmetry code: (i) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4A···O2ii | 0.93 | 2.58 | 3.460 (5) | 159 |
C13—H13A···O3iii | 0.93 | 2.58 | 3.284 (6) | 133 |
Symmetry codes: (ii) x−1/2, y−1/2, z; (iii) x+1/2, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C8H5O3)2(C10H8N2)] |
Mr | 517.96 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 295 |
a, b, c (Å) | 11.923 (2), 10.992 (2), 18.275 (4) |
β (°) | 100.11 (3) |
V (Å3) | 2357.9 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.97 |
Crystal size (mm) | 0.23 × 0.17 × 0.08 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID |
Absorption correction | Empirical (using intensity measurements) (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.820, 0.925 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11333, 2700, 1672 |
Rint | 0.067 |
(sin θ/λ)max (Å−1) | 0.648 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.058, 0.146, 1.23 |
No. of reflections | 2698 |
No. of parameters | 159 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.16, −0.50 |
Computer programs: RAPID-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006).
Cu—O1i | 1.935 (3) | Cu—N | 1.984 (3) |
Cu—O1 | 1.935 (3) | Cu—Ni | 1.984 (3) |
Symmetry code: (i) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4A···O2ii | 0.93 | 2.58 | 3.460 (5) | 159 |
C13—H13A···O3iii | 0.93 | 2.58 | 3.284 (6) | 133 |
Symmetry codes: (ii) x−1/2, y−1/2, z; (iii) x+1/2, −y+1/2, z−1/2. |
Acknowledgements
This project was supported by the Scientific Research Fund of Ningbo University (grant No. XKL069). Thanks are also extended to the K. C. Wong Magna Fund of Ningbo University.
References
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Transition metal complexes with carboxylic acids using various secondary building units (SBUs) frequently show interesting physical, chemical and/or biological properties (Sun et al., 2002, Li et al., 2007, Liu et al., 2006). Herein, we are interested in selfassemblies of Cu2+ ions and 2,2'-bipydine (bipy) with 4-formylbenzoate, which led to the preparation of [Cu(C10H8N2)(C8H5O3)2].
The asymmetric unit contains a half CuII cation, a half bipy ligand and one 4-formylbenzoate (L- = p-CHO-C6H4COO-) ligand. Both the CuII ion and bipy ligand lie on a crystallographic twofold rotation axis. In the complex, two crystallographically equivalent L- anions function as monodentate ligands, while one bipy molecular functions as a terminal ligand adopting an expected chelating mode to coordinate with one CuII ion, forming a mononuclear unit. The CuII ion is coordinated by two nitrogen atoms (N and N#1, #1 = 1 - x, y, 1.5 - z) of one bipy ligand and two oxygen atoms (O1, O1#1) from two different carboxylic groups of two L- ligands exhibiting essentially distorted square planar geometry (Fig.1). The Cu–N/O bonds in the quadrilateral plane are 1.984 (3) and 1.934 (3) Å, respectively. The cisoid bond angles fall in the region 80.9 (1)–93.8 (1) °, and transoid ones are both equal to 170.2 (1) °, exhibiting substantial deviations from 90 and 180 ° for a quadrate. In comparison with literatures, the above bonding values are normal (Li et al., 2007).
The complex molecules are linked via weak C4–H4···O2#2 (#2 = -0.5 + x, -0.5 + y, z) hydrogen bonds to generate two-dimensional supramolecular layers in the ab plane. Along [001] direction the two-dimensional layers are stacked in a sequence ···ABABA··· and further connected via C13–H13···O3#3 (#3 = 0.5 + x, 0.5 - y, -0.5 + z) hydrogen bonds form three-dimensional supramolecular structure.