organic compounds
4-[(4-Chlorophenyl)(phenyl)methyl]piperazin-1-ium picrate monohydrate
aSchool of Environmental Science and Engineering, Donghua University, Shanghai 201620, People's Repulic of China, bDepartment of Chemistry, G. Madegowda Institute of Technology, Bharathi Nagar 571 422, India, cDepartment of Sugar Technology, University of Mysore, Sir. M. V. PG Center, Tubinakere 571 402, India, dDepartment of Physics, School of Engineering and Technology, Jain University, Bangalore 562 112, India, and eCollege of Chemistry, Chemical Engineering and Biotechnology, Donghua University, Shanghai 201620, People's Repulic of China
*Correspondence e-mail: hongqili@dhu.edu.cn
The 17H20ClN2+·C6H2N3O7−·H2O, contains a piperazin-1-ium cation, a picrate anion and one solvent water molecule. The piperazene ring is protonated at one N atom and adopts a highly distorted chair conformation with the chloropheny(phenyl)methyl substituent on the second N atom in an equatorial position. The is stabilized by O—H⋯O, N—H⋯O and C—H⋯O hydrogen bonds.
of the title compound, CRelated literature
For the biological activity of 1-benzylpiperazine, see: Campbell et al. (1973). For related structures, see: Jasinski et al. (2011); Song et al. (2012). For bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536812031984/sj5246sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812031984/sj5246Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812031984/sj5246Isup3.cml
1-((4-Chlorophenyl)(phenyl)methyl)piperazine (2.88 g, 0.01 mol) and picric acid (2.99 g, 0.01 mol) were dissolved separately in methanol. Both the solutions were mixed together and stirred for a few minutes at room temperature. The precipitate was collected by filtration and purified by recrystallization from methanol. On recrystallization with DMF after 15 days, good quality single crystals were obtained by the slow evaporation method. (M.P.: 441–445 K).
H atoms were placed at idealized positions and allowed to ride on their parent atoms with C—H distances in the range 0.92–0.98 Å and N—H = 0.86 Å; Uiso(H) values were set equal to 1.2Ueq(carrier atom).
1-Benzylpiperazine was originally synthesized as a potential anthelmintic (Campbell et al., 1973) and its derivatives were found to possess excellent pharmacological activities. These include vasodilator, hypotensive and antiviral activity, the ability to increase cerebral blood flow and broad pharmacological action on central nervous system. In the course of our studies on the salts of piperazines (Jasinski et al., 2011; Song et al., 2012) and in view of the importance of piperazines, the paper reports the crystal and molecular structure of the title piperazin-1-ium salt.
The molecular structure and atom numbering scheme of the title compound are shown in Fig 1. In the title compound, the piperazine group is protonated at the N2 atom and adopts a highly distorted chair conformation with puckering parameters Q, θ and φ having values of 0.595 (3) °, 6.4 (3) ° and 342 (3) °, respectively. For an ideal chair conformation, θ has a value of 0 or 180°. The bond lengths (Allen et al., 1987) and bond angles are in good agreement with standard values. The is stabilized by intermolecular O–H···O, N–H···O and C–H···O hydrogen bonds.
For the biological activity of 1-benzylpiperazine, see: Campbell et al. (1973). For related structures, see: Jasinski et al. (2011); Song et al. (2012). For bond-length data, see: Allen et al. (1987).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. A view of the title compound with the atom numbering scheme. Displacement ellipsoids for non-H atoms are drawn at the 50% probability level. |
C17H20ClN2+·C6H2N3O7−·H2O | F(000) = 2224 |
Mr = 533.92 | Dx = 1.419 Mg m−3 |
Monoclinic, C2/c | Melting point = 441–445 K |
Hall symbol: -C 2yc | Mo Kα radiation, λ = 0.71073 Å |
a = 21.144 (2) Å | Cell parameters from 2514 reflections |
b = 8.2997 (8) Å | θ = 2.3–21.0° |
c = 28.528 (3) Å | µ = 0.21 mm−1 |
β = 93.029 (1)° | T = 296 K |
V = 4999.3 (8) Å3 | Block, yellow |
Z = 8 | 0.25 × 0.22 × 0.07 mm |
Bruker APEXII CCD diffractometer | 4417 independent reflections |
Radiation source: fine-focus sealed tube | 2996 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
φ and ω scans | θmax = 25.1°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −25→20 |
Tmin = 0.949, Tmax = 0.985 | k = −9→8 |
12567 measured reflections | l = −31→33 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.057 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.175 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0837P)2 + 4.3115P] where P = (Fo2 + 2Fc2)/3 |
4417 reflections | (Δ/σ)max < 0.001 |
334 parameters | Δρmax = 0.63 e Å−3 |
0 restraints | Δρmin = −0.46 e Å−3 |
C17H20ClN2+·C6H2N3O7−·H2O | V = 4999.3 (8) Å3 |
Mr = 533.92 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 21.144 (2) Å | µ = 0.21 mm−1 |
b = 8.2997 (8) Å | T = 296 K |
c = 28.528 (3) Å | 0.25 × 0.22 × 0.07 mm |
β = 93.029 (1)° |
Bruker APEXII CCD diffractometer | 4417 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2996 reflections with I > 2σ(I) |
Tmin = 0.949, Tmax = 0.985 | Rint = 0.026 |
12567 measured reflections |
R[F2 > 2σ(F2)] = 0.057 | 0 restraints |
wR(F2) = 0.175 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.63 e Å−3 |
4417 reflections | Δρmin = −0.46 e Å−3 |
334 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.4904 (2) | 0.8333 (6) | 0.18443 (11) | 0.0783 (11) | |
C2 | 0.5527 (2) | 0.8799 (4) | 0.19014 (11) | 0.0737 (10) | |
H2 | 0.5633 | 0.9873 | 0.1955 | 0.088* | |
C3 | 0.59944 (16) | 0.7637 (4) | 0.18770 (10) | 0.0606 (8) | |
H3 | 0.6418 | 0.7938 | 0.1915 | 0.073* | |
C4 | 0.58414 (13) | 0.6039 (4) | 0.17965 (9) | 0.0490 (7) | |
C5 | 0.52105 (16) | 0.5623 (5) | 0.17391 (12) | 0.0700 (9) | |
H5 | 0.5100 | 0.4553 | 0.1682 | 0.084* | |
C6 | 0.47386 (18) | 0.6774 (7) | 0.17651 (14) | 0.0917 (13) | |
H6 | 0.4314 | 0.6481 | 0.1729 | 0.110* | |
C7 | 0.63529 (13) | 0.4768 (3) | 0.17948 (9) | 0.0471 (7) | |
H7 | 0.6158 | 0.3740 | 0.1699 | 0.057* | |
C8 | 0.66452 (14) | 0.4592 (3) | 0.22959 (9) | 0.0472 (7) | |
C9 | 0.63449 (16) | 0.3611 (4) | 0.26056 (10) | 0.0609 (8) | |
H9 | 0.5991 | 0.3016 | 0.2503 | 0.073* | |
C10 | 0.65702 (19) | 0.3512 (4) | 0.30690 (11) | 0.0749 (10) | |
H10 | 0.6356 | 0.2884 | 0.3279 | 0.090* | |
C11 | 0.7106 (2) | 0.4329 (4) | 0.32234 (11) | 0.0766 (11) | |
H11 | 0.7259 | 0.4240 | 0.3534 | 0.092* | |
C12 | 0.74098 (18) | 0.5272 (4) | 0.29149 (11) | 0.0683 (9) | |
H12 | 0.7776 | 0.5820 | 0.3015 | 0.082* | |
C13 | 0.71784 (15) | 0.5421 (3) | 0.24554 (10) | 0.0572 (8) | |
H13 | 0.7385 | 0.6089 | 0.2251 | 0.069* | |
C14 | 0.65583 (14) | 0.5363 (4) | 0.09816 (9) | 0.0526 (7) | |
H14A | 0.6220 | 0.6154 | 0.0980 | 0.063* | |
H14B | 0.6379 | 0.4345 | 0.0874 | 0.063* | |
C15 | 0.70566 (15) | 0.5901 (4) | 0.06551 (10) | 0.0569 (8) | |
H15A | 0.6869 | 0.5989 | 0.0338 | 0.068* | |
H15B | 0.7213 | 0.6956 | 0.0750 | 0.068* | |
C16 | 0.78429 (15) | 0.4460 (4) | 0.11470 (10) | 0.0624 (8) | |
H16A | 0.8031 | 0.5443 | 0.1274 | 0.075* | |
H16B | 0.8170 | 0.3640 | 0.1148 | 0.075* | |
C17 | 0.73229 (14) | 0.3923 (4) | 0.14476 (10) | 0.0535 (7) | |
H17A | 0.7135 | 0.2937 | 0.1321 | 0.064* | |
H17B | 0.7495 | 0.3703 | 0.1763 | 0.064* | |
C18 | 0.89491 (14) | 0.6145 (3) | 0.98892 (9) | 0.0476 (7) | |
C19 | 0.92823 (13) | 0.7277 (3) | 1.01969 (9) | 0.0458 (6) | |
C20 | 0.98723 (13) | 0.7849 (3) | 1.01257 (9) | 0.0478 (7) | |
H20 | 1.0065 | 0.8563 | 1.0340 | 0.057* | |
C21 | 1.01856 (13) | 0.7372 (3) | 0.97362 (9) | 0.0463 (6) | |
C22 | 0.98998 (13) | 0.6302 (3) | 0.94120 (9) | 0.0473 (7) | |
H22 | 1.0111 | 0.5966 | 0.9151 | 0.057* | |
C23 | 0.93097 (14) | 0.5763 (3) | 0.94855 (8) | 0.0456 (6) | |
Cl1 | 0.43227 (7) | 0.9810 (2) | 0.18712 (4) | 0.1402 (6) | |
N1 | 0.68382 (10) | 0.5177 (2) | 0.14618 (7) | 0.0434 (5) | |
N2 | 0.75908 (12) | 0.4746 (3) | 0.06606 (8) | 0.0579 (7) | |
H2A | 0.7458 | 0.3808 | 0.0531 | 0.069* | |
H2B | 0.7900 | 0.5140 | 0.0488 | 0.069* | |
N3 | 0.89901 (14) | 0.7854 (3) | 1.06134 (9) | 0.0658 (7) | |
N4 | 1.08105 (12) | 0.7960 (3) | 0.96648 (9) | 0.0631 (7) | |
N5 | 0.90198 (15) | 0.4691 (3) | 0.91305 (9) | 0.0638 (7) | |
O1 | 0.84301 (10) | 0.5503 (3) | 0.99573 (7) | 0.0664 (6) | |
O2 | 0.84210 (16) | 0.7700 (4) | 1.06424 (12) | 0.1309 (14) | |
O3 | 0.92957 (14) | 0.8649 (4) | 1.08951 (9) | 0.1129 (11) | |
O4 | 1.10570 (11) | 0.8886 (3) | 0.99550 (9) | 0.0830 (7) | |
O5 | 1.10730 (11) | 0.7526 (4) | 0.93145 (9) | 0.0903 (8) | |
O6 | 0.93478 (15) | 0.3624 (3) | 0.89779 (9) | 0.0927 (9) | |
O7 | 0.84749 (14) | 0.4966 (4) | 0.89915 (9) | 0.0922 (9) | |
O1W | 0.74452 (12) | 0.3604 (3) | 0.95584 (11) | 0.0996 (9) | |
H1WA | 0.7756 | 0.4210 | 0.9638 | 0.100* | |
H1WB | 0.7219 | 0.4009 | 0.9333 | 0.100* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.076 (3) | 0.113 (3) | 0.0465 (18) | 0.037 (2) | 0.0071 (17) | 0.008 (2) |
C2 | 0.104 (3) | 0.069 (2) | 0.0476 (18) | 0.020 (2) | 0.0063 (18) | −0.0020 (16) |
C3 | 0.063 (2) | 0.066 (2) | 0.0534 (17) | 0.0055 (16) | 0.0062 (14) | −0.0042 (15) |
C4 | 0.0517 (17) | 0.0633 (19) | 0.0323 (13) | −0.0009 (14) | 0.0060 (11) | 0.0012 (12) |
C5 | 0.057 (2) | 0.086 (2) | 0.066 (2) | −0.0055 (18) | −0.0042 (16) | 0.0045 (18) |
C6 | 0.053 (2) | 0.139 (4) | 0.083 (3) | 0.013 (2) | −0.0016 (19) | 0.021 (3) |
C7 | 0.0550 (17) | 0.0479 (16) | 0.0390 (14) | −0.0083 (13) | 0.0066 (12) | −0.0017 (12) |
C8 | 0.0609 (18) | 0.0451 (15) | 0.0362 (14) | 0.0050 (13) | 0.0099 (12) | 0.0016 (12) |
C9 | 0.070 (2) | 0.0621 (19) | 0.0514 (17) | −0.0011 (16) | 0.0138 (15) | 0.0072 (15) |
C10 | 0.102 (3) | 0.078 (2) | 0.0464 (18) | 0.010 (2) | 0.0210 (18) | 0.0172 (17) |
C11 | 0.114 (3) | 0.074 (2) | 0.0407 (17) | 0.022 (2) | −0.0060 (18) | −0.0037 (17) |
C12 | 0.092 (3) | 0.059 (2) | 0.0517 (19) | 0.0035 (18) | −0.0103 (17) | −0.0110 (16) |
C13 | 0.076 (2) | 0.0493 (17) | 0.0459 (16) | −0.0060 (15) | 0.0015 (14) | 0.0000 (13) |
C14 | 0.0597 (18) | 0.0622 (18) | 0.0360 (14) | −0.0025 (14) | 0.0050 (12) | 0.0029 (13) |
C15 | 0.068 (2) | 0.0625 (19) | 0.0413 (15) | −0.0056 (15) | 0.0105 (13) | 0.0058 (13) |
C16 | 0.0562 (19) | 0.077 (2) | 0.0551 (18) | 0.0061 (16) | 0.0105 (14) | −0.0074 (16) |
C17 | 0.0615 (18) | 0.0558 (17) | 0.0437 (15) | 0.0042 (14) | 0.0074 (13) | −0.0004 (13) |
C18 | 0.0596 (18) | 0.0456 (15) | 0.0377 (14) | −0.0050 (13) | 0.0036 (12) | 0.0050 (12) |
C19 | 0.0569 (18) | 0.0463 (15) | 0.0349 (13) | −0.0004 (13) | 0.0105 (12) | −0.0017 (11) |
C20 | 0.0556 (18) | 0.0469 (15) | 0.0407 (14) | 0.0011 (13) | 0.0000 (12) | −0.0056 (12) |
C21 | 0.0450 (16) | 0.0524 (16) | 0.0416 (14) | 0.0024 (12) | 0.0037 (12) | −0.0032 (12) |
C22 | 0.0587 (18) | 0.0481 (16) | 0.0357 (14) | 0.0051 (13) | 0.0066 (12) | 0.0004 (12) |
C23 | 0.0615 (18) | 0.0420 (15) | 0.0332 (13) | −0.0034 (13) | 0.0002 (12) | −0.0011 (11) |
Cl1 | 0.1339 (11) | 0.1911 (15) | 0.0945 (9) | 0.1027 (11) | −0.0038 (7) | 0.0031 (8) |
N1 | 0.0497 (13) | 0.0483 (13) | 0.0329 (11) | 0.0007 (10) | 0.0079 (9) | 0.0009 (9) |
N2 | 0.0628 (16) | 0.0653 (16) | 0.0474 (14) | −0.0124 (13) | 0.0204 (11) | −0.0090 (12) |
N3 | 0.073 (2) | 0.0739 (18) | 0.0525 (15) | −0.0172 (15) | 0.0207 (14) | −0.0167 (13) |
N4 | 0.0517 (16) | 0.0783 (18) | 0.0599 (16) | −0.0023 (13) | 0.0082 (13) | −0.0124 (14) |
N5 | 0.083 (2) | 0.0657 (18) | 0.0430 (14) | −0.0191 (16) | 0.0051 (14) | −0.0043 (13) |
O1 | 0.0707 (15) | 0.0780 (15) | 0.0518 (12) | −0.0294 (12) | 0.0165 (10) | −0.0060 (10) |
O2 | 0.110 (2) | 0.157 (3) | 0.134 (3) | −0.068 (2) | 0.080 (2) | −0.084 (2) |
O3 | 0.096 (2) | 0.176 (3) | 0.0682 (16) | −0.019 (2) | 0.0176 (14) | −0.0608 (19) |
O4 | 0.0640 (15) | 0.1024 (19) | 0.0827 (16) | −0.0237 (14) | 0.0053 (12) | −0.0275 (15) |
O5 | 0.0620 (15) | 0.131 (2) | 0.0809 (17) | −0.0089 (15) | 0.0277 (13) | −0.0341 (16) |
O6 | 0.142 (3) | 0.0651 (15) | 0.0704 (16) | −0.0023 (16) | 0.0001 (16) | −0.0268 (13) |
O7 | 0.0768 (18) | 0.135 (2) | 0.0642 (16) | −0.0288 (17) | −0.0021 (13) | −0.0199 (15) |
O1W | 0.0735 (17) | 0.0920 (19) | 0.133 (2) | −0.0152 (14) | 0.0024 (16) | −0.0241 (17) |
C1—C6 | 1.356 (6) | C15—H15B | 0.9700 |
C1—C2 | 1.376 (5) | C16—N2 | 1.479 (4) |
C1—Cl1 | 1.740 (4) | C16—C17 | 1.497 (4) |
C2—C3 | 1.384 (5) | C16—H16A | 0.9700 |
C2—H2 | 0.9300 | C16—H16B | 0.9700 |
C3—C4 | 1.382 (4) | C17—N1 | 1.463 (3) |
C3—H3 | 0.9300 | C17—H17A | 0.9700 |
C4—C5 | 1.379 (4) | C17—H17B | 0.9700 |
C4—C7 | 1.511 (4) | C18—O1 | 1.244 (3) |
C5—C6 | 1.386 (5) | C18—C19 | 1.444 (4) |
C5—H5 | 0.9300 | C18—C23 | 1.449 (4) |
C6—H6 | 0.9300 | C19—C20 | 1.360 (4) |
C7—N1 | 1.474 (3) | C19—N3 | 1.449 (4) |
C7—C8 | 1.534 (4) | C20—C21 | 1.381 (4) |
C7—H7 | 0.9800 | C20—H20 | 0.9300 |
C8—C13 | 1.378 (4) | C21—C22 | 1.397 (4) |
C8—C9 | 1.381 (4) | C21—N4 | 1.433 (4) |
C9—C10 | 1.384 (4) | C22—C23 | 1.352 (4) |
C9—H9 | 0.9300 | C22—H22 | 0.9300 |
C10—C11 | 1.372 (5) | C23—N5 | 1.459 (4) |
C10—H10 | 0.9300 | N2—H2A | 0.9000 |
C11—C12 | 1.364 (5) | N2—H2B | 0.9000 |
C11—H11 | 0.9300 | N3—O3 | 1.202 (3) |
C12—C13 | 1.380 (4) | N3—O2 | 1.217 (4) |
C12—H12 | 0.9300 | N4—O5 | 1.223 (3) |
C13—H13 | 0.9300 | N4—O4 | 1.226 (3) |
C14—N1 | 1.471 (3) | N5—O6 | 1.219 (4) |
C14—C15 | 1.510 (4) | N5—O7 | 1.220 (4) |
C14—H14A | 0.9700 | O1W—H1WA | 0.8501 |
C14—H14B | 0.9700 | O1W—H1WA | 0.8501 |
C15—N2 | 1.481 (4) | O1W—H1WB | 0.8502 |
C15—H15A | 0.9700 | ||
C6—C1—C2 | 121.6 (3) | H15A—C15—H15B | 108.0 |
C6—C1—Cl1 | 120.2 (4) | N2—C16—C17 | 110.2 (2) |
C2—C1—Cl1 | 118.2 (4) | N2—C16—H16A | 109.6 |
C1—C2—C3 | 118.7 (4) | C17—C16—H16A | 109.6 |
C1—C2—H2 | 120.6 | N2—C16—H16B | 109.6 |
C3—C2—H2 | 120.6 | C17—C16—H16B | 109.6 |
C4—C3—C2 | 121.0 (3) | H16A—C16—H16B | 108.1 |
C4—C3—H3 | 119.5 | N1—C17—C16 | 109.9 (2) |
C2—C3—H3 | 119.5 | N1—C17—H17A | 109.7 |
C5—C4—C3 | 118.5 (3) | C16—C17—H17A | 109.7 |
C5—C4—C7 | 120.9 (3) | N1—C17—H17B | 109.7 |
C3—C4—C7 | 120.6 (3) | C16—C17—H17B | 109.7 |
C4—C5—C6 | 121.0 (4) | H17A—C17—H17B | 108.2 |
C4—C5—H5 | 119.5 | O1—C18—C19 | 126.1 (3) |
C6—C5—H5 | 119.5 | O1—C18—C23 | 122.4 (2) |
C1—C6—C5 | 119.2 (4) | C19—C18—C23 | 111.4 (2) |
C1—C6—H6 | 120.4 | C20—C19—C18 | 123.9 (2) |
C5—C6—H6 | 120.4 | C20—C19—N3 | 116.2 (2) |
N1—C7—C4 | 111.4 (2) | C18—C19—N3 | 119.9 (3) |
N1—C7—C8 | 111.3 (2) | C19—C20—C21 | 120.2 (2) |
C4—C7—C8 | 108.5 (2) | C19—C20—H20 | 119.9 |
N1—C7—H7 | 108.6 | C21—C20—H20 | 119.9 |
C4—C7—H7 | 108.6 | C20—C21—C22 | 120.4 (3) |
C8—C7—H7 | 108.6 | C20—C21—N4 | 120.1 (2) |
C13—C8—C9 | 118.6 (3) | C22—C21—N4 | 119.5 (2) |
C13—C8—C7 | 122.8 (2) | C23—C22—C21 | 118.6 (2) |
C9—C8—C7 | 118.5 (3) | C23—C22—H22 | 120.7 |
C8—C9—C10 | 120.0 (3) | C21—C22—H22 | 120.7 |
C8—C9—H9 | 120.0 | C22—C23—C18 | 125.4 (2) |
C10—C9—H9 | 120.0 | C22—C23—N5 | 116.8 (2) |
C11—C10—C9 | 120.9 (3) | C18—C23—N5 | 117.7 (3) |
C11—C10—H10 | 119.5 | C17—N1—C14 | 107.3 (2) |
C9—C10—H10 | 119.5 | C17—N1—C7 | 111.5 (2) |
C12—C11—C10 | 119.1 (3) | C14—N1—C7 | 111.4 (2) |
C12—C11—H11 | 120.5 | C16—N2—C15 | 110.5 (2) |
C10—C11—H11 | 120.5 | C16—N2—H2A | 109.5 |
C11—C12—C13 | 120.6 (3) | C15—N2—H2A | 109.5 |
C11—C12—H12 | 119.7 | C16—N2—H2B | 109.5 |
C13—C12—H12 | 119.7 | C15—N2—H2B | 109.5 |
C8—C13—C12 | 120.8 (3) | H2A—N2—H2B | 108.1 |
C8—C13—H13 | 119.6 | O3—N3—O2 | 120.7 (3) |
C12—C13—H13 | 119.6 | O3—N3—C19 | 119.5 (3) |
N1—C14—C15 | 110.2 (2) | O2—N3—C19 | 119.1 (3) |
N1—C14—H14A | 109.6 | O5—N4—O4 | 122.8 (3) |
C15—C14—H14A | 109.6 | O5—N4—C21 | 118.5 (3) |
N1—C14—H14B | 109.6 | O4—N4—C21 | 118.7 (2) |
C15—C14—H14B | 109.6 | O6—N5—O7 | 124.4 (3) |
H14A—C14—H14B | 108.1 | O6—N5—C23 | 117.7 (3) |
N2—C15—C14 | 111.0 (2) | O7—N5—C23 | 117.8 (3) |
N2—C15—H15A | 109.4 | H1WA—O1W—H1WA | 0.0 |
C14—C15—H15A | 109.4 | H1WA—O1W—H1WB | 111.4 |
N2—C15—H15B | 109.4 | H1WA—O1W—H1WB | 111.4 |
C14—C15—H15B | 109.4 |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1Wi | 0.90 | 2.03 | 2.850 (4) | 151 |
N2—H2B···O1ii | 0.90 | 1.96 | 2.819 (3) | 160 |
N2—H2B···O2ii | 0.90 | 2.42 | 3.017 (4) | 124 |
O1W—H1WA···O1 | 0.85 | 1.97 | 2.805 (3) | 168 |
C16—H16B···O5iii | 0.97 | 2.34 | 3.166 (4) | 143 |
Symmetry codes: (i) −x+3/2, −y+1/2, −z+1; (ii) x, y, z−1; (iii) −x+2, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C17H20ClN2+·C6H2N3O7−·H2O |
Mr | 533.92 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 296 |
a, b, c (Å) | 21.144 (2), 8.2997 (8), 28.528 (3) |
β (°) | 93.029 (1) |
V (Å3) | 4999.3 (8) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.21 |
Crystal size (mm) | 0.25 × 0.22 × 0.07 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.949, 0.985 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12567, 4417, 2996 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.057, 0.175, 1.04 |
No. of reflections | 4417 |
No. of parameters | 334 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.63, −0.46 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1Wi | 0.90 | 2.03 | 2.850 (4) | 150.9 |
N2—H2B···O1ii | 0.90 | 1.96 | 2.819 (3) | 160.4 |
N2—H2B···O2ii | 0.90 | 2.42 | 3.017 (4) | 123.8 |
O1W—H1WA···O1 | 0.85 | 1.97 | 2.805 (3) | 168.0 |
C16—H16B···O5iii | 0.97 | 2.34 | 3.166 (4) | 143 |
Symmetry codes: (i) −x+3/2, −y+1/2, −z+1; (ii) x, y, z−1; (iii) −x+2, −y+1, −z+1. |
Acknowledgements
This work was supported in part by the Council for the Chemical Sciences of the Netherlands Organization for Scientific Research. YS and HL acknowledge financial support by the Fundamental Research Funds for the Central Universities.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CSD CrossRef Web of Science Google Scholar
Bruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Campbell, H., Cline, W., Evans, M., Lloyd, J. & Peck, A. W. (1973). Eur. J. Clin. Pharmacol. 6, 170–176. CrossRef CAS PubMed Web of Science Google Scholar
Jasinski, J. P., Butcher, R. J., Siddegowda, M. S., Yathirajan, H. S. & Chidan Kumar, C. S. (2011). Acta Cryst. E67, o500–o501. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Song, Y., Chidan Kumar, C. S., Nethravathi, G. B., Naveen, S. & Li, H. (2012). Acta Cryst. E68, o1747. CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
1-Benzylpiperazine was originally synthesized as a potential anthelmintic (Campbell et al., 1973) and its derivatives were found to possess excellent pharmacological activities. These include vasodilator, hypotensive and antiviral activity, the ability to increase cerebral blood flow and broad pharmacological action on central nervous system. In the course of our studies on the salts of piperazines (Jasinski et al., 2011; Song et al., 2012) and in view of the importance of piperazines, the paper reports the crystal and molecular structure of the title piperazin-1-ium salt.
The molecular structure and atom numbering scheme of the title compound are shown in Fig 1. In the title compound, the piperazine group is protonated at the N2 atom and adopts a highly distorted chair conformation with puckering parameters Q, θ and φ having values of 0.595 (3) °, 6.4 (3) ° and 342 (3) °, respectively. For an ideal chair conformation, θ has a value of 0 or 180°. The bond lengths (Allen et al., 1987) and bond angles are in good agreement with standard values. The crystal structure is stabilized by intermolecular O–H···O, N–H···O and C–H···O hydrogen bonds.