organic compounds
2-[Hydroxy(2-methoxyphenyl)methyl]acrylonitrile
aDepartment of Organic Chemistry, University of Madras, Maraimalai Campus, Chennai 600 025, India, bDepartment of Physics, Ranipettai Engineering College, Thenkadappathangal, Walaja 632 513, India, and cDepartment of Physics, Thanthai Periyar Government Institute of Technology, Vellore 632 002, India
*Correspondence e-mail: smurugavel27@gmail.com
In the title compound, C11H11NO2, the mean planes formed by the benzene ring and the C and N atoms of the acryl group are almost orthogonal to each other, with a dihedral angle of 85.7 (1)°. During the structure analysis, it was observed that the contains large accessible voids, with a volume of 186.9 Å3, which may host disordered solvent molecules. This affects the diffraction pattern, mostly at low scattering angles. Density identified in these solvent-accessible areas was calculated and corrected for using the SQUEEZE routine in PLATON [Spek (2009), Acta Cryst. D65, 148–155]. Despite the presence of the hydroxy group in the molecule, no classical or nonclassical hydrogen bonds are observed in the structure. This may reflect the fact that the O—H group points towards the solvent-accessible void.
Related literature
For the uses of acrylonitrile derivatives, see: Ohsumi et al. (1998). For a related structure, see: Cobo et al. (2005).
Experimental
Crystal data
|
Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia (1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536812031728/sj5256sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812031728/sj5256Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812031728/sj5256Isup3.cml
A mixture of 2-methoxybenzaldehyde (1 g, 7.3 mmol), acrylonitrile (0.58 g, 11.0 mmol) and 1,4-diazabicyclo[2.2.2]octane (0.20 g, 1.8 mmol) was kept at room temperature for 3 d. Then the reaction mixture was diluted with ethyl acetate and water. The aqueous layer was extracted with ethyl acetate. The combined organic layers were dried over anhydrous sodium sulfate. Solvent was evaporated and the residue subjected to
The pure title compound was obtained as a colourless solid (95% yield). Recrystallization was carried out using ethyl acetate as solvent.All the H atoms were positioned geometrically, (C—H = 0.93–0.98 Å and O—H = 0.82 Å) constrained to ride on their parent atom, with Uiso(H) = 1.5Ueq for methyl H atoms and 1.2Ueq(C) for other H atoms. During the structure analysis, it was observed that the
contains large accessible voids, which host disordered solvent molecules. This affects the diffraction pattern, mostly at low scattering angles and was corrected with the SQUEEZE program (Spek, 2009).Acrylonitrile derivatives have been shown to possess antitubercular and antitumour activities (Ohsumi et al., 1998). In view of this biological importance, the
of the title compound has been determined and the results are presented here.In the title compound (Fig. 1), the mean planes formed by the phenyl ring C1–C6 and acryl group (N1/C7–C10) are orthogonal to each other with a dihedral angle 85.7 (1)°. The bond length C8—C9 [1.429 (3) Å] is significantly shorter than the expected value for a C—C single bond because of conjugation effects. The carbonitrile side chain (C8—-C9—-N1) is almost linear, with the angle around central carbon atom being 178.6 (2)°. The title compound exhibits structural similarities with the closely related structure, (E)-3-(4-chlorophenyl)-2-(2-thienyl)acrylonitrile (Cobo et al., 2005).
For the uses of acrylonitrile derivatives, see: Ohsumi et al. (1998). For a related structure, see: Cobo et al. (2005).
Data collection: APEX2 (Bruker, 2004); cell
APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia (1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).C11H11NO2 | Z = 2 |
Mr = 189.21 | F(000) = 200 |
Triclinic, P1 | Dx = 0.947 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.9063 (4) Å | Cell parameters from 3700 reflections |
b = 8.7085 (4) Å | θ = 2.5–29.5° |
c = 11.7294 (6) Å | µ = 0.07 mm−1 |
α = 94.864 (3)° | T = 293 K |
β = 98.013 (3)° | Block, colourless |
γ = 106.579 (2)° | 0.25 × 0.23 × 0.17 mm |
V = 663.73 (6) Å3 |
Bruker APEXII CCD diffractometer | 3667 independent reflections |
Radiation source: fine-focus sealed tube | 2302 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
Detector resolution: 10.0 pixels mm-1 | θmax = 29.5°, θmin = 2.5° |
ω scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | k = −11→12 |
Tmin = 0.984, Tmax = 0.989 | l = −16→14 |
14371 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.060 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.215 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.1283P)2] where P = (Fo2 + 2Fc2)/3 |
3667 reflections | (Δ/σ)max < 0.001 |
128 parameters | Δρmax = 0.37 e Å−3 |
0 restraints | Δρmin = −0.17 e Å−3 |
C11H11NO2 | γ = 106.579 (2)° |
Mr = 189.21 | V = 663.73 (6) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.9063 (4) Å | Mo Kα radiation |
b = 8.7085 (4) Å | µ = 0.07 mm−1 |
c = 11.7294 (6) Å | T = 293 K |
α = 94.864 (3)° | 0.25 × 0.23 × 0.17 mm |
β = 98.013 (3)° |
Bruker APEXII CCD diffractometer | 3667 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2302 reflections with I > 2σ(I) |
Tmin = 0.984, Tmax = 0.989 | Rint = 0.024 |
14371 measured reflections |
R[F2 > 2σ(F2)] = 0.060 | 0 restraints |
wR(F2) = 0.215 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.37 e Å−3 |
3667 reflections | Δρmin = −0.17 e Å−3 |
128 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C6 | 0.40136 (19) | 0.02493 (15) | 0.23097 (11) | 0.0512 (3) | |
O1 | 0.32726 (19) | 0.20317 (15) | 0.10146 (8) | 0.0785 (4) | |
H1A | 0.2641 | 0.2678 | 0.0867 | 0.118* | |
C8 | 0.3411 (2) | 0.28106 (17) | 0.30328 (11) | 0.0594 (4) | |
C7 | 0.2833 (2) | 0.14393 (17) | 0.20547 (11) | 0.0553 (3) | |
H7 | 0.1361 | 0.0880 | 0.1962 | 0.066* | |
O2 | 0.19770 (18) | −0.05952 (14) | 0.37012 (10) | 0.0761 (4) | |
C5 | 0.3559 (2) | −0.07361 (16) | 0.31777 (12) | 0.0586 (4) | |
C1 | 0.5551 (2) | 0.01363 (17) | 0.17103 (14) | 0.0634 (4) | |
H1 | 0.5839 | 0.0773 | 0.1121 | 0.076* | |
C4 | 0.4708 (3) | −0.17723 (18) | 0.34459 (16) | 0.0765 (5) | |
H4 | 0.4429 | −0.2416 | 0.4032 | 0.092* | |
C3 | 0.6255 (3) | −0.1844 (2) | 0.2844 (2) | 0.0878 (6) | |
H3 | 0.7026 | −0.2534 | 0.3031 | 0.105* | |
C9 | 0.5538 (3) | 0.37095 (19) | 0.33066 (14) | 0.0711 (4) | |
C2 | 0.6680 (3) | −0.0914 (2) | 0.1970 (2) | 0.0828 (5) | |
H2 | 0.7714 | −0.0986 | 0.1557 | 0.099* | |
C11 | 0.1371 (3) | −0.1609 (2) | 0.45522 (17) | 0.0910 (6) | |
H11A | 0.1030 | −0.2719 | 0.4222 | 0.136* | |
H11B | 0.0195 | −0.1415 | 0.4814 | 0.136* | |
H11C | 0.2476 | −0.1380 | 0.5197 | 0.136* | |
C10 | 0.2061 (4) | 0.3212 (3) | 0.36068 (17) | 0.0902 (6) | |
H10A | 0.2497 | 0.4086 | 0.4193 | 0.108* | |
H10B | 0.0681 | 0.2620 | 0.3422 | 0.108* | |
N1 | 0.7246 (3) | 0.4399 (2) | 0.35287 (19) | 0.1078 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C6 | 0.0495 (7) | 0.0425 (6) | 0.0587 (7) | 0.0150 (5) | −0.0018 (5) | 0.0054 (5) |
O1 | 0.1091 (9) | 0.1020 (9) | 0.0560 (6) | 0.0696 (8) | 0.0259 (6) | 0.0323 (6) |
C8 | 0.0844 (10) | 0.0566 (7) | 0.0543 (7) | 0.0388 (7) | 0.0214 (6) | 0.0241 (6) |
C7 | 0.0587 (8) | 0.0630 (8) | 0.0544 (7) | 0.0309 (6) | 0.0104 (5) | 0.0195 (6) |
O2 | 0.0857 (8) | 0.0723 (7) | 0.0806 (7) | 0.0276 (6) | 0.0241 (6) | 0.0374 (6) |
C5 | 0.0615 (8) | 0.0431 (6) | 0.0648 (8) | 0.0127 (6) | −0.0055 (6) | 0.0096 (5) |
C1 | 0.0574 (8) | 0.0508 (7) | 0.0811 (9) | 0.0177 (6) | 0.0089 (7) | 0.0037 (6) |
C4 | 0.0866 (11) | 0.0470 (7) | 0.0893 (11) | 0.0224 (7) | −0.0147 (9) | 0.0141 (7) |
C3 | 0.0793 (11) | 0.0553 (9) | 0.1254 (15) | 0.0359 (8) | −0.0193 (11) | 0.0000 (9) |
C9 | 0.0944 (13) | 0.0490 (8) | 0.0748 (9) | 0.0295 (8) | 0.0123 (8) | 0.0108 (7) |
C2 | 0.0618 (9) | 0.0593 (9) | 0.1254 (15) | 0.0262 (7) | 0.0046 (9) | −0.0082 (9) |
C11 | 0.1114 (15) | 0.0760 (11) | 0.0767 (11) | 0.0088 (10) | 0.0148 (10) | 0.0323 (9) |
C10 | 0.1299 (17) | 0.0953 (13) | 0.0781 (10) | 0.0637 (12) | 0.0510 (11) | 0.0319 (9) |
N1 | 0.1053 (14) | 0.0681 (10) | 0.1354 (17) | 0.0171 (10) | 0.0003 (12) | −0.0017 (10) |
C6—C1 | 1.374 (2) | C1—H1 | 0.9300 |
C6—C5 | 1.3982 (19) | C4—C3 | 1.373 (3) |
C6—C7 | 1.5149 (16) | C4—H4 | 0.9300 |
O1—C7 | 1.4026 (15) | C3—C2 | 1.371 (3) |
O1—H1A | 0.8200 | C3—H3 | 0.9300 |
C8—C10 | 1.329 (2) | C9—N1 | 1.142 (2) |
C8—C9 | 1.429 (3) | C2—H2 | 0.9300 |
C8—C7 | 1.507 (2) | C11—H11A | 0.9600 |
C7—H7 | 0.9800 | C11—H11B | 0.9600 |
O2—C5 | 1.3549 (19) | C11—H11C | 0.9600 |
O2—C11 | 1.4165 (18) | C10—H10A | 0.9300 |
C5—C4 | 1.389 (2) | C10—H10B | 0.9300 |
C1—C2 | 1.388 (2) | ||
C1—C6—C5 | 119.23 (12) | C3—C4—C5 | 119.88 (16) |
C1—C6—C7 | 120.95 (12) | C3—C4—H4 | 120.1 |
C5—C6—C7 | 119.81 (12) | C5—C4—H4 | 120.1 |
C7—O1—H1A | 109.5 | C2—C3—C4 | 120.98 (14) |
C10—C8—C9 | 120.64 (17) | C2—C3—H3 | 119.5 |
C10—C8—C7 | 123.50 (17) | C4—C3—H3 | 119.5 |
C9—C8—C7 | 115.85 (12) | N1—C9—C8 | 178.61 (17) |
O1—C7—C8 | 110.27 (11) | C3—C2—C1 | 119.24 (18) |
O1—C7—C6 | 108.58 (10) | C3—C2—H2 | 120.4 |
C8—C7—C6 | 110.66 (10) | C1—C2—H2 | 120.4 |
O1—C7—H7 | 109.1 | O2—C11—H11A | 109.5 |
C8—C7—H7 | 109.1 | O2—C11—H11B | 109.5 |
C6—C7—H7 | 109.1 | H11A—C11—H11B | 109.5 |
C5—O2—C11 | 118.82 (14) | O2—C11—H11C | 109.5 |
O2—C5—C4 | 124.63 (14) | H11A—C11—H11C | 109.5 |
O2—C5—C6 | 115.73 (11) | H11B—C11—H11C | 109.5 |
C4—C5—C6 | 119.64 (15) | C8—C10—H10A | 120.0 |
C6—C1—C2 | 121.00 (16) | C8—C10—H10B | 120.0 |
C6—C1—H1 | 119.5 | H10A—C10—H10B | 120.0 |
C2—C1—H1 | 119.5 | ||
C10—C8—C7—O1 | 116.07 (15) | C1—C6—C5—C4 | 2.1 (2) |
C9—C8—C7—O1 | −62.57 (14) | C7—C6—C5—C4 | −177.03 (12) |
C10—C8—C7—C6 | −123.79 (15) | C5—C6—C1—C2 | −1.3 (2) |
C9—C8—C7—C6 | 57.57 (15) | C7—C6—C1—C2 | 177.77 (13) |
C1—C6—C7—O1 | 12.72 (18) | O2—C5—C4—C3 | 178.66 (14) |
C5—C6—C7—O1 | −168.18 (12) | C6—C5—C4—C3 | −1.2 (2) |
C1—C6—C7—C8 | −108.43 (14) | C5—C4—C3—C2 | −0.5 (3) |
C5—C6—C7—C8 | 70.67 (16) | C10—C8—C9—N1 | 125 (8) |
C11—O2—C5—C4 | −2.7 (2) | C7—C8—C9—N1 | −56 (8) |
C11—O2—C5—C6 | 177.19 (13) | C4—C3—C2—C1 | 1.3 (3) |
C1—C6—C5—O2 | −177.78 (12) | C6—C1—C2—C3 | −0.3 (2) |
C7—C6—C5—O2 | 3.11 (19) |
Experimental details
Crystal data | |
Chemical formula | C11H11NO2 |
Mr | 189.21 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 6.9063 (4), 8.7085 (4), 11.7294 (6) |
α, β, γ (°) | 94.864 (3), 98.013 (3), 106.579 (2) |
V (Å3) | 663.73 (6) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.25 × 0.23 × 0.17 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.984, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14371, 3667, 2302 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.693 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.060, 0.215, 1.08 |
No. of reflections | 3667 |
No. of parameters | 128 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.37, −0.17 |
Computer programs: APEX2 (Bruker, 2004), APEX2 and SAINT (Bruker, 2004), SAINT and XPREP (Bruker, 2004), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia (1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
Footnotes
‡Additional correspondence author, e-mail: bhakthadoss@yahoo.com.
Acknowledgements
The authors thank Dr Babu Vargheese, SAIF, IIT, Madras, India, for his help with the data collection.
References
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Acrylonitrile derivatives have been shown to possess antitubercular and antitumour activities (Ohsumi et al., 1998). In view of this biological importance, the crystal structure of the title compound has been determined and the results are presented here.
In the title compound (Fig. 1), the mean planes formed by the phenyl ring C1–C6 and acryl group (N1/C7–C10) are orthogonal to each other with a dihedral angle 85.7 (1)°. The bond length C8—C9 [1.429 (3) Å] is significantly shorter than the expected value for a C—C single bond because of conjugation effects. The carbonitrile side chain (C8—-C9—-N1) is almost linear, with the angle around central carbon atom being 178.6 (2)°. The title compound exhibits structural similarities with the closely related structure, (E)-3-(4-chlorophenyl)-2-(2-thienyl)acrylonitrile (Cobo et al., 2005).