metal-organic compounds
Diaquabis(N,N-diethylnicotinamide-κN1)bis(4-formylbenzoato-κO1)zinc
aDepartment of Chemistry, Kafkas University, 36100 Kars, Turkey, bDepartment of Physics, Sakarya University, 54187 Esentepe, Sakarya, Turkey, and cDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey
*Correspondence e-mail: merzifon@hacettepe.edu.tr
In the title complex, [Zn(C8H5O3)2(C10H14N2O)2(H2O)2], the ZnII cation is located on an inversion center and is coordinated by two 4-formylbenzoate anions, two N,N-diethylnicotinamide (DENA) ligands and two water molecules. The four O atoms in the equatorial plane around the ZnII cation form a slightly distorted square-planar arrangement, while the slightly distorted octahedral coordination is completed by the two N atoms of the DENA ligands in the axial positions. The dihedral angle between the carboxylate group and the adjacent benzene ring is 2.96 (11)°, while the pyridine ring and the benzene ring are oriented at a dihedral angle of 79.26 (4)°. The coordinating water molecule links with the carboxylate group via an intramolecular O—H⋯O hydrogen bond. In the crystal, O—H⋯O and weak C—H⋯O hydrogen bonds link the molecules into a three-dimensional supramolecular network. A π–π contact between the parallel pyridine rings of adjacent molecules may further stabilize the [centroid–centroid distance = 3.5654 (8) Å].
Related literature
For literature on niacin, see: Krishnamachari (1974). For information on the nicotinic acid derivative N,N-diethylnicotinamide, see: Bigoli et al. (1972). For related structures, see: Aydın et al. (2012); Hökelek et al. (1996, 2009a,b); Hökelek & Necefoğlu (2007, 1998); Necefoğlu, Özbek et al. (2011); Necefoğlu, Maracı et al. (2011); Sertçelik et al. (2012). For bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536812031200/xu5586sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812031200/xu5586Isup2.hkl
The title compound was prepared by the reaction of ZnSO4.H2O (0.90 g, 5 mmol) in H2O (30 ml) and DENA (1.78 g, 10 mmol) in H2O (10 ml) with sodium 4-formylbenzoate (1.72 g, 10 mmol) in H2O (100 ml) at room temperature. The mixture was filtered and set aside to crystallize at ambient temperature for several days, giving colorless single crystals.
Atoms H8 (for CH) and H51 and H52 (for H2O) were located in a difference Fourier map and were refined freely. The C-bound H-atoms were positioned geometrically with C—H = 0.93, 0.97 and 0.96 Å, for aromatic, methylene and methyl H-atoms, respectively, and constrained to ride on their parent atoms, with Uiso(H) = k × Ueq(C), where k = 1.5 for methyl H-atoms and k = 1.2 for all other H-atoms.
As a part of our ongoing investigations of transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its
is reported herein.In the title mononuclear complex, ZnII cation is located on an inversion center and is coordinated by two 4-formylbenzoate (FB) anions, two N,N-diethylnicotinamide (DENA) ligands and two water molecules, all ligands coordinating in a monodentate manner (Fig. 1). The crystal structures of similar complexes of CuII, CoII, NiII, MnII and ZnII ions, [Cu(C7H5O2)2(C10H14N2O)2] (Hökelek et al., 1996), [Cu(C7H4BrO2)2(C6H6N2O)2(H2O)2] (Necefoğlu, Özbek et al., 2011), [Co(C6H6N2O)2(C7H4NO4)2(H2O)2] (Hökelek & Necefoğlu, 1998), [Co(C9H9O2)2(C10H14N2O)2(H2O)2] (Necefoğlu, Maracı et al., 2011), [Co(C7H4IO2)2(C6H6N2O)2(H2O)2] (Aydın et al., 2012), [Ni(C7H4ClO2)2(C6H6N2O)2(H2O)2] (Hökelek et al., 2009a), [Ni(C5H5O3)2(C6H6N2O)2(H2O)2] (Sertçelik et al., 2012), [Mn(C9H10NO2)2(H2O)4].2H2O (Hökelek & Necefoğlu, 2007) and [Zn(C7H4BrO2)2(C6H6N2O)2(H2O)2] (Hökelek et al., 2009b) have also been reported. In the copper(II) complex mentioned above the two benzoate ions coordinate to the CuII atom as bidentate ligands, while in the other structures all the ligands coordinate in a monodentate manner.
In the title complex, the four symmetry related O atoms (O2, O2', O5 and O5') in the equatorial plane around the ZnII ion form a slightly distorted square-planar arrangement, while the slightly distorted octahedral coordination is completed by the two symmetry related N atoms of the DENA ligands (N1 and N1') in the axial positions. The near equalities of the C1—O1 [1.2533 (16) Å] and C1—O2 [1.2623 (16) Å] bonds in the carboxylate group indicate delocalized bonding arrangement, rather than localized single and double bonds. The Zn—O bond lengths are 2.1128 (9) Å (for benzoate oxygens) and 2.1289 (10) Å (for water oxygens), and the Cu—N bond length is 2.1452 (11) Å, close to standard values (Allen et al., 1987). The Zn atom is displaced out of the mean-plane of the carboxylate group (O1/C1/O2) by 0.8455 (1) Å. The dihedral angle between the planar carboxylate group and the adjacent benzene ring A (C2—C7) is 2.96 (11)°. The benzene A (C2—C7) and the pyridine B (N1/C9—C13) rings are oriented at a dihedral angle of A/B = 79.26 (4)°. The coordinating water molecule links with the carboxylate group via an O—H···O hydrogen bond (Table 1).
In the crystal, intermolecular O—H···O and weak C—H···O hydrogen bonds (Table 1) link the molecules into a three-dimensional supramolecular network, in which they may be effective in the stabilization of the structure. The π–π contact between the pyridine rings, Cg2—Cg2i [symmetry code: (i) 1 - x, 1 - y, -z, where Cg2 is the centroid of the ring B (N1/C9-C13)] may further stabilize the structure, with centroid-centroid distance of 3.5654 (8) Å].
For literature on niacin, see: Krishnamachari (1974). For information on the nicotinic acid derivative N,N-diethylnicotinamide, see: Bigoli et al. (1972). For related structures, see: Aydın et al. (2012); Hökelek et al. (1996, 2009a,b); Hökelek & Necefoğlu (2007, 1998); Necefoğlu, Özbek et al. (2011); Necefoğlu, Maracı et al. (2011); Sertçelik et al. (2012). For bond-length data, see: Allen et al. (1987).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title molecule with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level [symmetry code: (') -x, -y, -z]. |
[Zn(C8H5O3)2(C10H14N2O)2(H2O)2] | Z = 1 |
Mr = 756.13 | F(000) = 396 |
Triclinic, P1 | Dx = 1.412 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.1988 (2) Å | Cell parameters from 9726 reflections |
b = 8.5347 (2) Å | θ = 2.6–28.3° |
c = 15.9719 (4) Å | µ = 0.75 mm−1 |
α = 85.435 (3)° | T = 100 K |
β = 78.010 (3)° | Block, colorless |
γ = 67.846 (2)° | 0.27 × 0.24 × 0.21 mm |
V = 889.03 (4) Å3 |
Bruker Kappa APEXII CCD area-detector diffractometer | 4409 independent reflections |
Radiation source: fine-focus sealed tube | 4128 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
φ and ω scans | θmax = 28.3°, θmin = 1.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −9→9 |
Tmin = 0.816, Tmax = 0.854 | k = −10→11 |
16164 measured reflections | l = −21→21 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.025 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.081 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | w = 1/[σ2(Fo2) + (0.0442P)2 + 0.2368P] where P = (Fo2 + 2Fc2)/3 |
4409 reflections | (Δ/σ)max < 0.001 |
246 parameters | Δρmax = 0.46 e Å−3 |
0 restraints | Δρmin = −0.33 e Å−3 |
[Zn(C8H5O3)2(C10H14N2O)2(H2O)2] | γ = 67.846 (2)° |
Mr = 756.13 | V = 889.03 (4) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.1988 (2) Å | Mo Kα radiation |
b = 8.5347 (2) Å | µ = 0.75 mm−1 |
c = 15.9719 (4) Å | T = 100 K |
α = 85.435 (3)° | 0.27 × 0.24 × 0.21 mm |
β = 78.010 (3)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 4409 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4128 reflections with I > 2σ(I) |
Tmin = 0.816, Tmax = 0.854 | Rint = 0.022 |
16164 measured reflections |
R[F2 > 2σ(F2)] = 0.025 | 0 restraints |
wR(F2) = 0.081 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | Δρmax = 0.46 e Å−3 |
4409 reflections | Δρmin = −0.33 e Å−3 |
246 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.0000 | 0.0000 | 0.0000 | 0.01115 (7) | |
O1 | −0.25853 (15) | 0.12741 (13) | 0.19910 (6) | 0.0168 (2) | |
O2 | 0.02518 (14) | 0.11856 (12) | 0.10604 (6) | 0.01404 (19) | |
O3 | 0.44445 (18) | 0.18906 (16) | 0.45766 (7) | 0.0274 (2) | |
O4 | 0.73443 (15) | −0.33358 (13) | 0.12604 (6) | 0.0173 (2) | |
O5 | 0.28172 (15) | 0.01887 (14) | −0.06344 (6) | 0.01568 (19) | |
H51 | 0.282 (3) | 0.112 (3) | −0.0758 (13) | 0.027 (5)* | |
H52 | 0.295 (3) | −0.030 (3) | −0.1102 (15) | 0.037 (6)* | |
N1 | 0.18033 (16) | −0.23838 (14) | 0.04858 (7) | 0.0129 (2) | |
N2 | 0.61125 (17) | −0.42797 (14) | 0.25277 (7) | 0.0148 (2) | |
C1 | −0.0800 (2) | 0.12606 (16) | 0.18050 (8) | 0.0128 (2) | |
C2 | 0.02005 (19) | 0.13218 (16) | 0.25409 (8) | 0.0128 (2) | |
C3 | 0.2155 (2) | 0.13794 (17) | 0.23866 (8) | 0.0142 (2) | |
H3 | 0.2864 | 0.1348 | 0.1827 | 0.017* | |
C4 | 0.3048 (2) | 0.14827 (17) | 0.30598 (8) | 0.0157 (3) | |
H4 | 0.4346 | 0.1529 | 0.2954 | 0.019* | |
C5 | 0.1978 (2) | 0.15163 (17) | 0.38982 (8) | 0.0158 (3) | |
C6 | 0.0046 (2) | 0.14231 (17) | 0.40557 (8) | 0.0164 (3) | |
H6 | −0.0650 | 0.1429 | 0.4616 | 0.020* | |
C7 | −0.0845 (2) | 0.13219 (17) | 0.33800 (8) | 0.0150 (3) | |
H7 | −0.2133 | 0.1254 | 0.3487 | 0.018* | |
C8 | 0.2874 (2) | 0.1654 (2) | 0.46331 (9) | 0.0211 (3) | |
H8 | 0.198 (3) | 0.153 (2) | 0.5225 (11) | 0.016 (4)* | |
C9 | 0.32059 (19) | −0.24272 (16) | 0.09356 (8) | 0.0127 (2) | |
H9 | 0.3407 | −0.1432 | 0.1000 | 0.015* | |
C10 | 0.43636 (19) | −0.38948 (16) | 0.13075 (8) | 0.0125 (2) | |
C11 | 0.4100 (2) | −0.53987 (17) | 0.11979 (8) | 0.0141 (2) | |
H11 | 0.4850 | −0.6401 | 0.1444 | 0.017* | |
C12 | 0.2696 (2) | −0.53643 (17) | 0.07137 (8) | 0.0151 (3) | |
H12 | 0.2503 | −0.6349 | 0.0620 | 0.018* | |
C13 | 0.1585 (2) | −0.38386 (17) | 0.03717 (8) | 0.0139 (2) | |
H13 | 0.0643 | −0.3823 | 0.0048 | 0.017* | |
C14 | 0.6039 (2) | −0.38178 (16) | 0.17105 (8) | 0.0130 (2) | |
C15 | 0.4557 (2) | −0.47566 (18) | 0.31161 (9) | 0.0182 (3) | |
H15A | 0.5213 | −0.5862 | 0.3356 | 0.022* | |
H15B | 0.3592 | −0.4845 | 0.2797 | 0.022* | |
C16 | 0.3398 (3) | −0.3501 (2) | 0.38430 (11) | 0.0314 (4) | |
H16A | 0.2364 | −0.3849 | 0.4192 | 0.047* | |
H16B | 0.2768 | −0.2398 | 0.3610 | 0.047* | |
H16C | 0.4330 | −0.3463 | 0.4185 | 0.047* | |
C17 | 0.7881 (2) | −0.42804 (18) | 0.28570 (9) | 0.0186 (3) | |
H17A | 0.9113 | −0.4800 | 0.2435 | 0.022* | |
H17B | 0.8000 | −0.4970 | 0.3371 | 0.022* | |
C18 | 0.7743 (3) | −0.2522 (2) | 0.30647 (10) | 0.0243 (3) | |
H18A | 0.8950 | −0.2611 | 0.3262 | 0.036* | |
H18B | 0.6563 | −0.2018 | 0.3503 | 0.036* | |
H18C | 0.7627 | −0.1830 | 0.2560 | 0.036* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.01120 (11) | 0.01159 (11) | 0.01099 (11) | −0.00424 (8) | −0.00333 (7) | 0.00145 (7) |
O1 | 0.0131 (4) | 0.0207 (5) | 0.0165 (4) | −0.0058 (4) | −0.0033 (3) | −0.0007 (4) |
O2 | 0.0156 (4) | 0.0149 (5) | 0.0123 (4) | −0.0065 (4) | −0.0029 (3) | 0.0005 (3) |
O3 | 0.0292 (6) | 0.0390 (7) | 0.0226 (5) | −0.0199 (5) | −0.0102 (4) | 0.0023 (5) |
O4 | 0.0159 (5) | 0.0197 (5) | 0.0190 (5) | −0.0096 (4) | −0.0041 (4) | 0.0028 (4) |
O5 | 0.0165 (5) | 0.0164 (5) | 0.0161 (5) | −0.0082 (4) | −0.0034 (4) | 0.0005 (4) |
N1 | 0.0124 (5) | 0.0132 (5) | 0.0126 (5) | −0.0043 (4) | −0.0025 (4) | 0.0004 (4) |
N2 | 0.0164 (5) | 0.0150 (5) | 0.0156 (5) | −0.0073 (4) | −0.0064 (4) | 0.0012 (4) |
C1 | 0.0144 (6) | 0.0086 (6) | 0.0148 (6) | −0.0028 (4) | −0.0045 (5) | 0.0006 (4) |
C2 | 0.0148 (6) | 0.0097 (6) | 0.0134 (6) | −0.0035 (5) | −0.0038 (5) | 0.0001 (4) |
C3 | 0.0149 (6) | 0.0143 (6) | 0.0132 (6) | −0.0058 (5) | −0.0013 (5) | −0.0002 (5) |
C4 | 0.0151 (6) | 0.0164 (6) | 0.0165 (6) | −0.0067 (5) | −0.0035 (5) | 0.0006 (5) |
C5 | 0.0188 (6) | 0.0152 (6) | 0.0148 (6) | −0.0069 (5) | −0.0053 (5) | 0.0008 (5) |
C6 | 0.0183 (6) | 0.0176 (7) | 0.0121 (6) | −0.0065 (5) | −0.0012 (5) | 0.0004 (5) |
C7 | 0.0134 (6) | 0.0151 (6) | 0.0164 (6) | −0.0054 (5) | −0.0024 (5) | 0.0003 (5) |
C8 | 0.0237 (7) | 0.0267 (8) | 0.0154 (6) | −0.0111 (6) | −0.0059 (5) | 0.0008 (5) |
C9 | 0.0137 (6) | 0.0116 (6) | 0.0136 (5) | −0.0053 (5) | −0.0027 (4) | −0.0007 (4) |
C10 | 0.0113 (5) | 0.0142 (6) | 0.0114 (5) | −0.0044 (5) | −0.0015 (4) | 0.0000 (4) |
C11 | 0.0147 (6) | 0.0126 (6) | 0.0146 (6) | −0.0041 (5) | −0.0037 (5) | 0.0012 (5) |
C12 | 0.0170 (6) | 0.0135 (6) | 0.0168 (6) | −0.0077 (5) | −0.0035 (5) | −0.0001 (5) |
C13 | 0.0133 (6) | 0.0163 (6) | 0.0131 (6) | −0.0064 (5) | −0.0029 (4) | −0.0002 (5) |
C14 | 0.0137 (6) | 0.0098 (6) | 0.0149 (6) | −0.0031 (5) | −0.0039 (5) | −0.0007 (4) |
C15 | 0.0219 (7) | 0.0198 (7) | 0.0145 (6) | −0.0099 (5) | −0.0035 (5) | 0.0015 (5) |
C16 | 0.0314 (9) | 0.0381 (10) | 0.0255 (8) | −0.0166 (7) | 0.0045 (6) | −0.0117 (7) |
C17 | 0.0208 (7) | 0.0174 (7) | 0.0216 (7) | −0.0076 (5) | −0.0126 (5) | 0.0031 (5) |
C18 | 0.0308 (8) | 0.0215 (7) | 0.0273 (7) | −0.0128 (6) | −0.0145 (6) | 0.0010 (6) |
Zn1—O2 | 2.1128 (9) | C7—C2 | 1.3940 (18) |
Zn1—O2i | 2.1128 (9) | C7—H7 | 0.9300 |
Zn1—O5 | 2.1289 (10) | C8—C5 | 1.4834 (19) |
Zn1—O5i | 2.1289 (10) | C8—H8 | 1.049 (17) |
Zn1—N1 | 2.1452 (11) | C9—C10 | 1.3843 (18) |
Zn1—N1i | 2.1452 (11) | C9—H9 | 0.9300 |
O1—C1 | 1.2533 (16) | C11—C10 | 1.3954 (18) |
O2—C1 | 1.2623 (16) | C11—C12 | 1.3857 (18) |
O3—C8 | 1.2057 (19) | C11—H11 | 0.9300 |
O4—C14 | 1.2382 (17) | C12—H12 | 0.9300 |
O5—H51 | 0.81 (2) | C13—C12 | 1.3843 (19) |
O5—H52 | 0.85 (2) | C13—H13 | 0.9300 |
N1—C9 | 1.3439 (16) | C14—C10 | 1.5040 (18) |
N1—C13 | 1.3397 (17) | C15—C16 | 1.521 (2) |
N2—C14 | 1.3390 (17) | C15—H15A | 0.9700 |
N2—C15 | 1.4655 (18) | C15—H15B | 0.9700 |
N2—C17 | 1.4747 (17) | C16—H16A | 0.9600 |
C1—C2 | 1.5143 (17) | C16—H16B | 0.9600 |
C3—C2 | 1.3958 (18) | C16—H16C | 0.9600 |
C3—C4 | 1.3866 (18) | C17—C18 | 1.525 (2) |
C3—H3 | 0.9300 | C17—H17A | 0.9700 |
C4—C5 | 1.3957 (19) | C17—H17B | 0.9700 |
C4—H4 | 0.9300 | C18—H18A | 0.9600 |
C6—C5 | 1.3926 (19) | C18—H18B | 0.9600 |
C6—C7 | 1.3885 (19) | C18—H18C | 0.9600 |
C6—H6 | 0.9300 | ||
O2—Zn1—O2i | 180.00 (8) | O3—C8—C5 | 125.06 (14) |
O2—Zn1—O5 | 87.26 (4) | O3—C8—H8 | 122.2 (10) |
O2i—Zn1—O5 | 92.74 (4) | C5—C8—H8 | 112.7 (10) |
O2—Zn1—O5i | 92.74 (4) | N1—C9—C10 | 122.57 (12) |
O2i—Zn1—O5i | 87.26 (4) | N1—C9—H9 | 118.7 |
O2—Zn1—N1 | 88.47 (4) | C10—C9—H9 | 118.7 |
O2i—Zn1—N1 | 91.53 (4) | C9—C10—C11 | 118.95 (12) |
O2—Zn1—N1i | 91.53 (4) | C9—C10—C14 | 117.31 (12) |
O2i—Zn1—N1i | 88.47 (4) | C11—C10—C14 | 123.23 (11) |
O5—Zn1—O5i | 180.00 (8) | C10—C11—H11 | 120.8 |
O5—Zn1—N1 | 86.62 (4) | C12—C11—C10 | 118.50 (12) |
O5i—Zn1—N1 | 93.38 (4) | C12—C11—H11 | 120.8 |
O5—Zn1—N1i | 93.38 (4) | C11—C12—H12 | 120.6 |
O5i—Zn1—N1i | 86.62 (4) | C13—C12—C11 | 118.86 (12) |
N1i—Zn1—N1 | 180.00 (10) | C13—C12—H12 | 120.6 |
C1—O2—Zn1 | 125.27 (9) | N1—C13—C12 | 123.03 (12) |
Zn1—O5—H51 | 117.4 (14) | N1—C13—H13 | 118.5 |
Zn1—O5—H52 | 98.3 (15) | C12—C13—H13 | 118.5 |
H52—O5—H51 | 107 (2) | O4—C14—N2 | 121.65 (12) |
C9—N1—Zn1 | 118.79 (9) | O4—C14—C10 | 117.88 (12) |
C13—N1—Zn1 | 123.15 (9) | N2—C14—C10 | 120.47 (12) |
C13—N1—C9 | 118.05 (11) | N2—C15—C16 | 113.09 (12) |
C14—N2—C15 | 124.84 (11) | N2—C15—H15A | 109.0 |
C14—N2—C17 | 117.10 (12) | N2—C15—H15B | 109.0 |
C15—N2—C17 | 118.06 (11) | C16—C15—H15A | 109.0 |
O1—C1—O2 | 126.07 (12) | C16—C15—H15B | 109.0 |
O1—C1—C2 | 117.12 (11) | H15A—C15—H15B | 107.8 |
O2—C1—C2 | 116.81 (11) | C15—C16—H16A | 109.5 |
C3—C2—C1 | 120.65 (11) | C15—C16—H16B | 109.5 |
C7—C2—C1 | 119.54 (12) | C15—C16—H16C | 109.5 |
C7—C2—C3 | 119.81 (12) | H16A—C16—H16B | 109.5 |
C2—C3—H3 | 119.7 | H16A—C16—H16C | 109.5 |
C4—C3—C2 | 120.65 (12) | H16B—C16—H16C | 109.5 |
C4—C3—H3 | 119.7 | N2—C17—C18 | 113.79 (12) |
C3—C4—C5 | 119.31 (13) | N2—C17—H17A | 108.8 |
C3—C4—H4 | 120.3 | N2—C17—H17B | 108.8 |
C5—C4—H4 | 120.3 | C18—C17—H17A | 108.8 |
C4—C5—C8 | 120.74 (13) | C18—C17—H17B | 108.8 |
C6—C5—C4 | 120.23 (12) | H17A—C17—H17B | 107.7 |
C6—C5—C8 | 119.03 (12) | C17—C18—H18A | 109.5 |
C5—C6—H6 | 119.8 | C17—C18—H18B | 109.5 |
C7—C6—C5 | 120.31 (12) | C17—C18—H18C | 109.5 |
C7—C6—H6 | 119.8 | H18A—C18—H18B | 109.5 |
C2—C7—H7 | 120.2 | H18A—C18—H18C | 109.5 |
C6—C7—C2 | 119.67 (12) | H18B—C18—H18C | 109.5 |
C6—C7—H7 | 120.2 | ||
O5—Zn1—O2—C1 | −166.52 (10) | O1—C1—C2—C3 | −177.42 (12) |
O5i—Zn1—O2—C1 | 13.48 (10) | O1—C1—C2—C7 | 2.52 (18) |
N1—Zn1—O2—C1 | −79.84 (10) | O2—C1—C2—C3 | 3.18 (18) |
N1i—Zn1—O2—C1 | 100.16 (10) | O2—C1—C2—C7 | −176.87 (12) |
O2—Zn1—N1—C9 | −30.48 (10) | C4—C3—C2—C1 | 178.20 (12) |
O2i—Zn1—N1—C9 | 149.52 (10) | C4—C3—C2—C7 | −1.7 (2) |
O2—Zn1—N1—C13 | 148.70 (10) | C2—C3—C4—C5 | 0.5 (2) |
O2i—Zn1—N1—C13 | −31.30 (10) | C3—C4—C5—C6 | 0.9 (2) |
O5—Zn1—N1—C9 | 56.87 (10) | C3—C4—C5—C8 | −179.00 (13) |
O5i—Zn1—N1—C9 | −123.13 (10) | C7—C6—C5—C4 | −1.0 (2) |
O5—Zn1—N1—C13 | −123.96 (10) | C7—C6—C5—C8 | 178.92 (13) |
O5i—Zn1—N1—C13 | 56.04 (10) | C5—C6—C7—C2 | −0.3 (2) |
Zn1—O2—C1—O1 | −29.35 (18) | C6—C7—C2—C1 | −178.30 (12) |
Zn1—O2—C1—C2 | 149.99 (9) | C6—C7—C2—C3 | 1.6 (2) |
Zn1—N1—C9—C10 | 176.76 (9) | O3—C8—C5—C4 | 6.7 (2) |
C13—N1—C9—C10 | −2.46 (19) | O3—C8—C5—C6 | −173.20 (15) |
Zn1—N1—C13—C12 | −177.44 (10) | N1—C9—C10—C11 | 1.38 (19) |
C9—N1—C13—C12 | 1.74 (19) | N1—C9—C10—C14 | 173.43 (12) |
C15—N2—C14—O4 | 175.78 (12) | C12—C11—C10—C9 | 0.49 (19) |
C15—N2—C14—C10 | −5.06 (19) | C12—C11—C10—C14 | −171.08 (12) |
C17—N2—C14—O4 | −3.29 (19) | C10—C11—C12—C13 | −1.16 (19) |
C17—N2—C14—C10 | 175.87 (11) | N1—C13—C12—C11 | 0.1 (2) |
C14—N2—C15—C16 | −112.92 (15) | O4—C14—C10—C9 | −55.69 (17) |
C17—N2—C15—C16 | 66.14 (17) | O4—C14—C10—C11 | 116.00 (14) |
C14—N2—C17—C18 | 77.07 (16) | N2—C14—C10—C9 | 125.13 (13) |
C15—N2—C17—C18 | −102.06 (14) | N2—C14—C10—C11 | −63.18 (18) |
Symmetry code: (i) −x, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H51···O4ii | 0.80 (2) | 1.97 (2) | 2.7591 (15) | 169 (2) |
O5—H52···O1i | 0.85 (2) | 1.81 (2) | 2.6494 (14) | 166 (2) |
C4—H4···O1iii | 0.93 | 2.36 | 3.1975 (19) | 150 |
C7—H7···O3iv | 0.93 | 2.60 | 3.406 (2) | 145 |
C11—H11···O1v | 0.93 | 2.40 | 3.3068 (17) | 166 |
Symmetry codes: (i) −x, −y, −z; (ii) −x+1, −y, −z; (iii) x+1, y, z; (iv) x−1, y, z; (v) x+1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C8H5O3)2(C10H14N2O)2(H2O)2] |
Mr | 756.13 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 7.1988 (2), 8.5347 (2), 15.9719 (4) |
α, β, γ (°) | 85.435 (3), 78.010 (3), 67.846 (2) |
V (Å3) | 889.03 (4) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.75 |
Crystal size (mm) | 0.27 × 0.24 × 0.21 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.816, 0.854 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16164, 4409, 4128 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.668 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.025, 0.081, 1.16 |
No. of reflections | 4409 |
No. of parameters | 246 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.46, −0.33 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H51···O4i | 0.80 (2) | 1.97 (2) | 2.7591 (15) | 169 (2) |
O5—H52···O1ii | 0.85 (2) | 1.81 (2) | 2.6494 (14) | 166 (2) |
C4—H4···O1iii | 0.93 | 2.36 | 3.1975 (19) | 150 |
C7—H7···O3iv | 0.93 | 2.60 | 3.406 (2) | 145 |
C11—H11···O1v | 0.93 | 2.40 | 3.3068 (17) | 166 |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x, −y, −z; (iii) x+1, y, z; (iv) x−1, y, z; (v) x+1, y−1, z. |
Acknowledgements
The authors are indebted to Anadolu University and the Medicinal Plants and Medicine Research Centre of Anadolu University, Eskişehir, Turkey, for the use of the X-ray diffractometer. This work was supported financially by Kafkas University Research Fund (grant No. 2012-FEF-12).
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans 2, pp. S1–19. CrossRef Web of Science Google Scholar
Aydın, Ö., Çaylak Delibaş, N., Necefoğlu, H. & Hökelek, T. (2012). Acta Cryst. E68, m521–m522. CSD CrossRef IUCr Journals Google Scholar
Bigoli, F., Braibanti, A., Pellinghelli, M. A. & Tiripicchio, A. (1972). Acta Cryst. B28, 962–966. CSD CrossRef CAS IUCr Journals Web of Science Google Scholar
Bruker (2005). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Hökelek, T., Dal, H., Tercan, B., Özbek, F. E. & Necefoğlu, H. (2009a). Acta Cryst. E65, m466–m467. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hökelek, T., Dal, H., Tercan, B., Özbek, F. E. & Necefoğlu, H. (2009b). Acta Cryst. E65, m607–m608. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hökelek, T., Gündüz, H. & Necefoğlu, H. (1996). Acta Cryst. C52, 2470–2473. CSD CrossRef Web of Science IUCr Journals Google Scholar
Hökelek, T. & Necefoğlu, H. (1998). Acta Cryst. C54, 1242–1244. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hökelek, T. & Necefoğlu, H. (2007). Acta Cryst. E63, m821–m823. Web of Science CSD CrossRef IUCr Journals Google Scholar
Krishnamachari, K. A. V. R. (1974). Am. J. Clin. Nutr. 27, 108–111. CrossRef CAS PubMed Web of Science Google Scholar
Necefoğlu, H., Maracı, A., Özbek, F. E., Tercan, B. & Hökelek, T. (2011). Acta Cryst. E67, m619–m620. Web of Science CSD CrossRef IUCr Journals Google Scholar
Necefoğlu, H., Özbek, F. E., Öztürk, V., Tercan, B. & Hökelek, T. (2011). Acta Cryst. E67, m900–m901. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sertçelik, M., Çaylak Delibaş, N., Necefoğlu, H. & Hökelek, T. (2012). Acta Cryst. E68, m946–m947. CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our ongoing investigations of transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its crystal structure is reported herein.
In the title mononuclear complex, ZnII cation is located on an inversion center and is coordinated by two 4-formylbenzoate (FB) anions, two N,N-diethylnicotinamide (DENA) ligands and two water molecules, all ligands coordinating in a monodentate manner (Fig. 1). The crystal structures of similar complexes of CuII, CoII, NiII, MnII and ZnII ions, [Cu(C7H5O2)2(C10H14N2O)2] (Hökelek et al., 1996), [Cu(C7H4BrO2)2(C6H6N2O)2(H2O)2] (Necefoğlu, Özbek et al., 2011), [Co(C6H6N2O)2(C7H4NO4)2(H2O)2] (Hökelek & Necefoğlu, 1998), [Co(C9H9O2)2(C10H14N2O)2(H2O)2] (Necefoğlu, Maracı et al., 2011), [Co(C7H4IO2)2(C6H6N2O)2(H2O)2] (Aydın et al., 2012), [Ni(C7H4ClO2)2(C6H6N2O)2(H2O)2] (Hökelek et al., 2009a), [Ni(C5H5O3)2(C6H6N2O)2(H2O)2] (Sertçelik et al., 2012), [Mn(C9H10NO2)2(H2O)4].2H2O (Hökelek & Necefoğlu, 2007) and [Zn(C7H4BrO2)2(C6H6N2O)2(H2O)2] (Hökelek et al., 2009b) have also been reported. In the copper(II) complex mentioned above the two benzoate ions coordinate to the CuII atom as bidentate ligands, while in the other structures all the ligands coordinate in a monodentate manner.
In the title complex, the four symmetry related O atoms (O2, O2', O5 and O5') in the equatorial plane around the ZnII ion form a slightly distorted square-planar arrangement, while the slightly distorted octahedral coordination is completed by the two symmetry related N atoms of the DENA ligands (N1 and N1') in the axial positions. The near equalities of the C1—O1 [1.2533 (16) Å] and C1—O2 [1.2623 (16) Å] bonds in the carboxylate group indicate delocalized bonding arrangement, rather than localized single and double bonds. The Zn—O bond lengths are 2.1128 (9) Å (for benzoate oxygens) and 2.1289 (10) Å (for water oxygens), and the Cu—N bond length is 2.1452 (11) Å, close to standard values (Allen et al., 1987). The Zn atom is displaced out of the mean-plane of the carboxylate group (O1/C1/O2) by 0.8455 (1) Å. The dihedral angle between the planar carboxylate group and the adjacent benzene ring A (C2—C7) is 2.96 (11)°. The benzene A (C2—C7) and the pyridine B (N1/C9—C13) rings are oriented at a dihedral angle of A/B = 79.26 (4)°. The coordinating water molecule links with the carboxylate group via an O—H···O hydrogen bond (Table 1).
In the crystal, intermolecular O—H···O and weak C—H···O hydrogen bonds (Table 1) link the molecules into a three-dimensional supramolecular network, in which they may be effective in the stabilization of the structure. The π–π contact between the pyridine rings, Cg2—Cg2i [symmetry code: (i) 1 - x, 1 - y, -z, where Cg2 is the centroid of the ring B (N1/C9-C13)] may further stabilize the structure, with centroid-centroid distance of 3.5654 (8) Å].