organic compounds
(1S,3R)-3-Isobutyl-2,3-dihydrospiro[benzo[f]isoindole-1,3′-indoline]-2′,4,9-trione methanol monosolvate
aDepartment of Chemistry, Karunya University, Coimbatore, India, bSchool of Pharmaceutical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, cMalaysian Institute of Pharmaceuticals and Nutraceuticals, Ministry of Science, Technology and Innovation, Halaman Bukit Gambir, 11700 Bayan Lepas, Penang, Malaysia, and dX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C23H20N2O3·CH3OH, the hexahydro-1H-benzo[f]isoindole and indoline rings are planar, with maximum deviations of 0.092 (1) and −0.095 (1) Å, respectively. The dihedral angle between these two rings is 88.03 (4)°. An O—H⋯N interaction links the main molecule and the methanol solvent molecule. An intramolecular C—H⋯O interaction forms an S(6) ring motif. In the crystal, the molecules form two-dimensional layers parallel to the bc plane through N—H⋯O and C—H⋯O interactions.
Related literature
For biological activities of naphthoquinones, see: Babula et al. (2007). For detailed literature on naphthoquinone chemistry, see: Chen et al. (2011); Silva et al. (2002). For hydrogen-bond motifs, see: Bernstein et al. (1995). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536812032643/xu5595sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812032643/xu5595Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812032643/xu5595Isup3.cml
A mixture of isatin (0.147 g, 1 mmol), L-leucine (0.131 g, 1 mmol) and 1,4-napthoquinone (0.158 g, 1 mmol) was refluxed in methanol (6 ml) until the disappearance of the starting material (monitored by thin layer
TLC). After standing for 1 h, the product of the reaction mixture was washed with cool water (2 × 25 ml) and cool ethanol (2 × 0.5 ml). The crude product was recrystallized from appropriate solvent to afford pure product (90% yield).N-bound H atoms were located from a difference Fourier map and freely refined. The remaining H atoms were positioned geometrically and refined using a riding model with C—H = 0.95–1.00 Å and Uiso(H) = 1.2Ueq(C) or 1.5Ueq(C) for methyl H atoms. A rotating group model was applied to the methyl group.
Naphthoquinones are known to possess various biological activities such as cyto-toxicity as well as antibacterial, antifungal, antiviral, insecticidal, anti-inflammatory, and antipyretic (Babula et al., 2007) properties. Recently, there have been a few efforts to conduct 1,3-cycloaddition involving naphthoquinones (Chen et al., 2011; Silva et al., 2002).
In the title compound, Fig. 1, the hexahydro-1H-benzo[f]isoindole (N1/C1–C12) and indoline (N2/C10/C17–C23) rings are planar with the maximum deviations of 0.092 (1) Å from atom N1 and -0.095 (1) Å from atom C10. The two rings make a dihedral angle of 88.03 (4)°. An O4—H1O4···N1 interaction links the main molecule with the methanol solvent molecule. An intramolecular interaction of C13—H13B···O1 forms an S(6) ring motif (Fig. 1).
In the crystal, the molecules form two-dimensional layers parallel to the bc-plane through the intermolecular interactions of N1—H1N1···O2i, N2—H1N2···O4ii and C19—H19A···O3i (Fig. 2).
For biological activities of naphthoquinones, see: Babula et al. (2007). For detailed literature on naphthoquinone chemistry, see: Chen et al. (2011); Silva et al. (2002). For hydrogen-bond motifs, see: Bernstein et al. (1995). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure, showing 50% probability displacement ellipsoids. Hydrogen atoms are shown as spheres of arbitrary radius. | |
Fig. 2. The crystal packing of (I). Dashed lines indicate hydrogen bonds. H atoms not involved in the hydrogen bond interactions have been omitted for clarity. |
C23H20N2O3·CH4O | F(000) = 856 |
Mr = 404.45 | Dx = 1.341 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7290 reflections |
a = 10.8485 (2) Å | θ = 2.6–30.1° |
b = 11.9605 (2) Å | µ = 0.09 mm−1 |
c = 16.5705 (3) Å | T = 100 K |
β = 111.246 (1)° | Block, brown |
V = 2003.95 (6) Å3 | 0.32 × 0.20 × 0.11 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 5871 independent reflections |
Radiation source: fine-focus sealed tube | 4460 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.035 |
φ and ω scans | θmax = 30.1°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −15→14 |
Tmin = 0.971, Tmax = 0.990 | k = −14→16 |
23197 measured reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.135 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0597P)2 + 0.9585P] where P = (Fo2 + 2Fc2)/3 |
5871 reflections | (Δ/σ)max < 0.001 |
286 parameters | Δρmax = 0.63 e Å−3 |
0 restraints | Δρmin = −0.45 e Å−3 |
C23H20N2O3·CH4O | V = 2003.95 (6) Å3 |
Mr = 404.45 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.8485 (2) Å | µ = 0.09 mm−1 |
b = 11.9605 (2) Å | T = 100 K |
c = 16.5705 (3) Å | 0.32 × 0.20 × 0.11 mm |
β = 111.246 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 5871 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4460 reflections with I > 2σ(I) |
Tmin = 0.971, Tmax = 0.990 | Rint = 0.035 |
23197 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 0 restraints |
wR(F2) = 0.135 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.63 e Å−3 |
5871 reflections | Δρmin = −0.45 e Å−3 |
286 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.09694 (11) | 0.90322 (10) | 0.51378 (7) | 0.0300 (3) | |
O2 | 0.56629 (10) | 1.07980 (8) | 0.70838 (7) | 0.0186 (2) | |
O3 | 0.35764 (11) | 1.07705 (9) | 0.83896 (7) | 0.0235 (2) | |
N1 | 0.33921 (12) | 0.82889 (10) | 0.78597 (8) | 0.0160 (2) | |
N2 | 0.56151 (12) | 1.00095 (10) | 0.91874 (8) | 0.0187 (3) | |
C1 | 0.40186 (14) | 1.06328 (11) | 0.56677 (9) | 0.0159 (3) | |
C2 | 0.46388 (15) | 1.13840 (12) | 0.52980 (9) | 0.0187 (3) | |
H2A | 0.5469 | 1.1698 | 0.5640 | 0.022* | |
C3 | 0.40491 (16) | 1.16770 (12) | 0.44316 (10) | 0.0219 (3) | |
H3A | 0.4469 | 1.2198 | 0.4183 | 0.026* | |
C4 | 0.28436 (16) | 1.12071 (13) | 0.39287 (10) | 0.0234 (3) | |
H4A | 0.2450 | 1.1399 | 0.3334 | 0.028* | |
C5 | 0.22110 (16) | 1.04605 (13) | 0.42882 (9) | 0.0218 (3) | |
H5A | 0.1385 | 1.0146 | 0.3940 | 0.026* | |
C6 | 0.27860 (14) | 1.01691 (11) | 0.51630 (9) | 0.0179 (3) | |
C7 | 0.20717 (15) | 0.93985 (12) | 0.55492 (9) | 0.0198 (3) | |
C8 | 0.27704 (14) | 0.90981 (12) | 0.64722 (9) | 0.0172 (3) | |
C9 | 0.22425 (14) | 0.83749 (12) | 0.70212 (9) | 0.0170 (3) | |
H9A | 0.1503 | 0.8777 | 0.7122 | 0.020* | |
C10 | 0.44298 (13) | 0.91165 (11) | 0.78621 (9) | 0.0146 (3) | |
C11 | 0.39672 (14) | 0.95085 (11) | 0.69362 (9) | 0.0155 (3) | |
C12 | 0.46506 (14) | 1.03460 (11) | 0.66010 (9) | 0.0148 (3) | |
C13 | 0.17636 (14) | 0.72159 (12) | 0.66517 (9) | 0.0177 (3) | |
H13A | 0.2508 | 0.6815 | 0.6570 | 0.021* | |
H13B | 0.1061 | 0.7307 | 0.6074 | 0.021* | |
C14 | 0.12248 (14) | 0.64910 (12) | 0.72118 (10) | 0.0184 (3) | |
H14A | 0.1887 | 0.6484 | 0.7817 | 0.022* | |
C15 | −0.00825 (16) | 0.69353 (14) | 0.72296 (12) | 0.0297 (4) | |
H15A | −0.0398 | 0.6443 | 0.7587 | 0.044* | |
H15B | −0.0738 | 0.6957 | 0.6639 | 0.044* | |
H15C | 0.0048 | 0.7691 | 0.7475 | 0.044* | |
C16 | 0.10456 (16) | 0.52942 (13) | 0.68612 (11) | 0.0238 (3) | |
H16A | 0.0629 | 0.4839 | 0.7183 | 0.036* | |
H16B | 0.1911 | 0.4977 | 0.6929 | 0.036* | |
H16C | 0.0482 | 0.5300 | 0.6246 | 0.036* | |
C17 | 0.44567 (14) | 1.00939 (12) | 0.84967 (9) | 0.0170 (3) | |
C18 | 0.58027 (13) | 0.86393 (11) | 0.82701 (9) | 0.0151 (3) | |
C19 | 0.64232 (14) | 0.77902 (12) | 0.79995 (9) | 0.0182 (3) | |
H19A | 0.6009 | 0.7448 | 0.7450 | 0.022* | |
C20 | 0.76752 (15) | 0.74465 (13) | 0.85537 (10) | 0.0223 (3) | |
H20A | 0.8126 | 0.6872 | 0.8376 | 0.027* | |
C21 | 0.82649 (15) | 0.79390 (14) | 0.93626 (11) | 0.0252 (3) | |
H21A | 0.9106 | 0.7680 | 0.9737 | 0.030* | |
C22 | 0.76496 (15) | 0.88039 (13) | 0.96365 (10) | 0.0232 (3) | |
H22A | 0.8056 | 0.9140 | 1.0189 | 0.028* | |
C23 | 0.64231 (14) | 0.91542 (12) | 0.90724 (9) | 0.0172 (3) | |
O4 | 0.31230 (12) | 0.84323 (11) | 0.94796 (8) | 0.0309 (3) | |
C24 | 0.1798 (2) | 0.8342 (2) | 0.93687 (13) | 0.0425 (5) | |
H24A | 0.1507 | 0.7567 | 0.9226 | 0.064* | |
H24B | 0.1274 | 0.8835 | 0.8896 | 0.064* | |
H24C | 0.1676 | 0.8561 | 0.9905 | 0.064* | |
H1N1 | 0.3759 (17) | 0.7609 (16) | 0.7870 (11) | 0.021 (4)* | |
H1N2 | 0.587 (2) | 1.0493 (17) | 0.9621 (13) | 0.031 (5)* | |
H1O4 | 0.317 (2) | 0.842 (2) | 0.8928 (17) | 0.056 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0248 (6) | 0.0283 (6) | 0.0245 (6) | −0.0059 (5) | −0.0059 (5) | 0.0056 (5) |
O2 | 0.0176 (5) | 0.0176 (5) | 0.0178 (5) | −0.0019 (4) | 0.0029 (4) | −0.0001 (4) |
O3 | 0.0241 (6) | 0.0198 (5) | 0.0255 (6) | 0.0038 (4) | 0.0076 (5) | −0.0032 (4) |
N1 | 0.0158 (6) | 0.0149 (6) | 0.0149 (5) | −0.0019 (4) | 0.0027 (5) | −0.0005 (4) |
N2 | 0.0202 (6) | 0.0187 (6) | 0.0149 (6) | −0.0024 (5) | 0.0036 (5) | −0.0056 (5) |
C1 | 0.0193 (7) | 0.0131 (6) | 0.0137 (6) | 0.0038 (5) | 0.0042 (5) | −0.0008 (5) |
C2 | 0.0237 (7) | 0.0154 (7) | 0.0175 (7) | 0.0014 (5) | 0.0078 (6) | −0.0017 (5) |
C3 | 0.0307 (8) | 0.0182 (7) | 0.0188 (7) | 0.0041 (6) | 0.0114 (6) | 0.0035 (5) |
C4 | 0.0309 (8) | 0.0223 (7) | 0.0152 (7) | 0.0071 (6) | 0.0060 (6) | 0.0032 (5) |
C5 | 0.0246 (7) | 0.0191 (7) | 0.0163 (7) | 0.0037 (6) | 0.0009 (6) | −0.0003 (5) |
C6 | 0.0212 (7) | 0.0138 (6) | 0.0155 (6) | 0.0036 (5) | 0.0028 (5) | −0.0003 (5) |
C7 | 0.0207 (7) | 0.0150 (6) | 0.0176 (7) | 0.0002 (5) | −0.0004 (6) | 0.0002 (5) |
C8 | 0.0180 (7) | 0.0141 (6) | 0.0157 (6) | 0.0005 (5) | 0.0018 (5) | 0.0005 (5) |
C9 | 0.0148 (6) | 0.0164 (6) | 0.0165 (6) | −0.0011 (5) | 0.0017 (5) | −0.0002 (5) |
C10 | 0.0151 (6) | 0.0139 (6) | 0.0126 (6) | −0.0014 (5) | 0.0024 (5) | −0.0011 (5) |
C11 | 0.0176 (6) | 0.0136 (6) | 0.0130 (6) | 0.0012 (5) | 0.0026 (5) | 0.0000 (5) |
C12 | 0.0166 (6) | 0.0118 (6) | 0.0145 (6) | 0.0020 (5) | 0.0040 (5) | −0.0006 (5) |
C13 | 0.0155 (6) | 0.0171 (7) | 0.0168 (6) | −0.0019 (5) | 0.0013 (5) | −0.0012 (5) |
C14 | 0.0161 (6) | 0.0182 (7) | 0.0189 (7) | −0.0016 (5) | 0.0039 (5) | −0.0015 (5) |
C15 | 0.0235 (8) | 0.0269 (8) | 0.0410 (10) | −0.0014 (6) | 0.0146 (7) | −0.0059 (7) |
C16 | 0.0257 (8) | 0.0176 (7) | 0.0269 (8) | −0.0032 (6) | 0.0080 (6) | −0.0015 (6) |
C17 | 0.0194 (7) | 0.0145 (6) | 0.0172 (6) | −0.0024 (5) | 0.0066 (6) | −0.0010 (5) |
C18 | 0.0156 (6) | 0.0142 (6) | 0.0144 (6) | −0.0005 (5) | 0.0043 (5) | 0.0025 (5) |
C19 | 0.0203 (7) | 0.0163 (7) | 0.0190 (7) | −0.0016 (5) | 0.0085 (6) | 0.0020 (5) |
C20 | 0.0215 (7) | 0.0187 (7) | 0.0298 (8) | 0.0030 (6) | 0.0130 (6) | 0.0069 (6) |
C21 | 0.0166 (7) | 0.0272 (8) | 0.0285 (8) | 0.0015 (6) | 0.0043 (6) | 0.0110 (6) |
C22 | 0.0198 (7) | 0.0275 (8) | 0.0172 (7) | −0.0036 (6) | 0.0004 (6) | 0.0033 (6) |
C23 | 0.0180 (7) | 0.0174 (7) | 0.0152 (6) | −0.0026 (5) | 0.0048 (5) | 0.0019 (5) |
O4 | 0.0261 (6) | 0.0436 (7) | 0.0229 (6) | −0.0067 (5) | 0.0087 (5) | −0.0121 (5) |
C24 | 0.0354 (10) | 0.0640 (14) | 0.0313 (10) | −0.0139 (9) | 0.0161 (8) | −0.0126 (9) |
O1—C7 | 1.2231 (18) | C11—C12 | 1.470 (2) |
O2—C12 | 1.2254 (17) | C13—C14 | 1.532 (2) |
O3—C17 | 1.2147 (18) | C13—H13A | 0.9900 |
N1—C9 | 1.4969 (18) | C13—H13B | 0.9900 |
N1—C10 | 1.4979 (18) | C14—C15 | 1.525 (2) |
N1—H1N1 | 0.902 (19) | C14—C16 | 1.531 (2) |
N2—C17 | 1.3627 (19) | C14—H14A | 1.0000 |
N2—C23 | 1.4043 (19) | C15—H15A | 0.9800 |
N2—H1N2 | 0.88 (2) | C15—H15B | 0.9800 |
C1—C2 | 1.391 (2) | C15—H15C | 0.9800 |
C1—C6 | 1.409 (2) | C16—H16A | 0.9800 |
C1—C12 | 1.4870 (19) | C16—H16B | 0.9800 |
C2—C3 | 1.388 (2) | C16—H16C | 0.9800 |
C2—H2A | 0.9500 | C18—C19 | 1.380 (2) |
C3—C4 | 1.390 (2) | C18—C23 | 1.3969 (19) |
C3—H3A | 0.9500 | C19—C20 | 1.398 (2) |
C4—C5 | 1.386 (2) | C19—H19A | 0.9500 |
C4—H4A | 0.9500 | C20—C21 | 1.390 (2) |
C5—C6 | 1.3989 (19) | C20—H20A | 0.9500 |
C5—H5A | 0.9500 | C21—C22 | 1.393 (2) |
C6—C7 | 1.490 (2) | C21—H21A | 0.9500 |
C7—C8 | 1.484 (2) | C22—C23 | 1.385 (2) |
C8—C11 | 1.3395 (19) | C22—H22A | 0.9500 |
C8—C9 | 1.510 (2) | O4—C24 | 1.386 (2) |
C9—C13 | 1.528 (2) | O4—H1O4 | 0.93 (3) |
C9—H9A | 1.0000 | C24—H24A | 0.9800 |
C10—C11 | 1.5059 (19) | C24—H24B | 0.9800 |
C10—C18 | 1.5072 (19) | C24—H24C | 0.9800 |
C10—C17 | 1.5656 (19) | ||
C9—N1—C10 | 109.25 (11) | C14—C13—H13A | 108.6 |
C9—N1—H1N1 | 107.0 (11) | C9—C13—H13B | 108.6 |
C10—N1—H1N1 | 105.6 (12) | C14—C13—H13B | 108.6 |
C17—N2—C23 | 111.78 (12) | H13A—C13—H13B | 107.5 |
C17—N2—H1N2 | 123.9 (13) | C15—C14—C16 | 110.01 (13) |
C23—N2—H1N2 | 123.9 (13) | C15—C14—C13 | 112.09 (13) |
C2—C1—C6 | 119.98 (13) | C16—C14—C13 | 108.85 (12) |
C2—C1—C12 | 119.52 (13) | C15—C14—H14A | 108.6 |
C6—C1—C12 | 120.48 (13) | C16—C14—H14A | 108.6 |
C3—C2—C1 | 120.22 (14) | C13—C14—H14A | 108.6 |
C3—C2—H2A | 119.9 | C14—C15—H15A | 109.5 |
C1—C2—H2A | 119.9 | C14—C15—H15B | 109.5 |
C2—C3—C4 | 119.93 (15) | H15A—C15—H15B | 109.5 |
C2—C3—H3A | 120.0 | C14—C15—H15C | 109.5 |
C4—C3—H3A | 120.0 | H15A—C15—H15C | 109.5 |
C5—C4—C3 | 120.53 (14) | H15B—C15—H15C | 109.5 |
C5—C4—H4A | 119.7 | C14—C16—H16A | 109.5 |
C3—C4—H4A | 119.7 | C14—C16—H16B | 109.5 |
C4—C5—C6 | 120.12 (14) | H16A—C16—H16B | 109.5 |
C4—C5—H5A | 119.9 | C14—C16—H16C | 109.5 |
C6—C5—H5A | 119.9 | H16A—C16—H16C | 109.5 |
C5—C6—C1 | 119.20 (14) | H16B—C16—H16C | 109.5 |
C5—C6—C7 | 119.56 (13) | O3—C17—N2 | 127.52 (13) |
C1—C6—C7 | 121.22 (12) | O3—C17—C10 | 125.24 (13) |
O1—C7—C8 | 121.25 (14) | N2—C17—C10 | 107.21 (12) |
O1—C7—C6 | 122.55 (13) | C19—C18—C23 | 120.68 (13) |
C8—C7—C6 | 116.20 (12) | C19—C18—C10 | 130.70 (13) |
C11—C8—C7 | 121.98 (14) | C23—C18—C10 | 108.48 (12) |
C11—C8—C9 | 111.37 (12) | C18—C19—C20 | 118.38 (14) |
C7—C8—C9 | 126.57 (12) | C18—C19—H19A | 120.8 |
N1—C9—C8 | 103.19 (11) | C20—C19—H19A | 120.8 |
N1—C9—C13 | 110.95 (11) | C21—C20—C19 | 120.48 (15) |
C8—C9—C13 | 115.22 (12) | C21—C20—H20A | 119.8 |
N1—C9—H9A | 109.1 | C19—C20—H20A | 119.8 |
C8—C9—H9A | 109.1 | C20—C21—C22 | 121.43 (14) |
C13—C9—H9A | 109.1 | C20—C21—H21A | 119.3 |
N1—C10—C11 | 103.32 (10) | C22—C21—H21A | 119.3 |
N1—C10—C18 | 111.75 (11) | C23—C22—C21 | 117.46 (14) |
C11—C10—C18 | 119.03 (12) | C23—C22—H22A | 121.3 |
N1—C10—C17 | 109.04 (11) | C21—C22—H22A | 121.3 |
C11—C10—C17 | 111.72 (11) | C22—C23—C18 | 121.51 (14) |
C18—C10—C17 | 101.93 (11) | C22—C23—N2 | 128.54 (14) |
C8—C11—C12 | 123.34 (12) | C18—C23—N2 | 109.95 (12) |
C8—C11—C10 | 111.50 (13) | C24—O4—H1O4 | 106.8 (15) |
C12—C11—C10 | 124.73 (12) | O4—C24—H24A | 109.5 |
O2—C12—C11 | 120.62 (12) | O4—C24—H24B | 109.5 |
O2—C12—C1 | 122.93 (13) | H24A—C24—H24B | 109.5 |
C11—C12—C1 | 116.40 (12) | O4—C24—H24C | 109.5 |
C9—C13—C14 | 114.79 (12) | H24A—C24—H24C | 109.5 |
C9—C13—H13A | 108.6 | H24B—C24—H24C | 109.5 |
C6—C1—C2—C3 | −0.2 (2) | C10—C11—C12—O2 | −1.2 (2) |
C12—C1—C2—C3 | −178.75 (13) | C8—C11—C12—C1 | −7.1 (2) |
C1—C2—C3—C4 | −0.9 (2) | C10—C11—C12—C1 | −178.98 (12) |
C2—C3—C4—C5 | 1.1 (2) | C2—C1—C12—O2 | 5.0 (2) |
C3—C4—C5—C6 | −0.3 (2) | C6—C1—C12—O2 | −173.59 (13) |
C4—C5—C6—C1 | −0.8 (2) | C2—C1—C12—C11 | −177.33 (13) |
C4—C5—C6—C7 | 177.73 (14) | C6—C1—C12—C11 | 4.10 (19) |
C2—C1—C6—C5 | 1.0 (2) | N1—C9—C13—C14 | 63.48 (16) |
C12—C1—C6—C5 | 179.55 (13) | C8—C9—C13—C14 | −179.76 (12) |
C2—C1—C6—C7 | −177.48 (13) | C9—C13—C14—C15 | 69.24 (16) |
C12—C1—C6—C7 | 1.1 (2) | C9—C13—C14—C16 | −168.83 (12) |
C5—C6—C7—O1 | −2.5 (2) | C23—N2—C17—O3 | −177.45 (15) |
C1—C6—C7—O1 | 175.95 (15) | C23—N2—C17—C10 | 4.59 (16) |
C5—C6—C7—C8 | 177.82 (13) | N1—C10—C17—O3 | −67.24 (18) |
C1—C6—C7—C8 | −3.7 (2) | C11—C10—C17—O3 | 46.32 (19) |
O1—C7—C8—C11 | −178.74 (15) | C18—C10—C17—O3 | 174.49 (14) |
C6—C7—C8—C11 | 0.9 (2) | N1—C10—C17—N2 | 110.78 (13) |
O1—C7—C8—C9 | −2.3 (2) | C11—C10—C17—N2 | −135.65 (13) |
C6—C7—C8—C9 | 177.34 (13) | C18—C10—C17—N2 | −7.49 (14) |
C10—N1—C9—C8 | 11.53 (14) | N1—C10—C18—C19 | 67.08 (19) |
C10—N1—C9—C13 | 135.47 (12) | C11—C10—C18—C19 | −53.3 (2) |
C11—C8—C9—N1 | −7.48 (16) | C17—C10—C18—C19 | −176.60 (14) |
C7—C8—C9—N1 | 175.79 (13) | N1—C10—C18—C23 | −108.46 (13) |
C11—C8—C9—C13 | −128.56 (13) | C11—C10—C18—C23 | 131.21 (13) |
C7—C8—C9—C13 | 54.71 (19) | C17—C10—C18—C23 | 7.86 (14) |
C9—N1—C10—C11 | −11.27 (14) | C23—C18—C19—C20 | 1.1 (2) |
C9—N1—C10—C18 | −140.42 (12) | C10—C18—C19—C20 | −173.99 (14) |
C9—N1—C10—C17 | 107.68 (12) | C18—C19—C20—C21 | 1.1 (2) |
C7—C8—C11—C12 | 4.6 (2) | C19—C20—C21—C22 | −1.7 (2) |
C9—C8—C11—C12 | −172.30 (13) | C20—C21—C22—C23 | 0.2 (2) |
C7—C8—C11—C10 | 177.44 (13) | C21—C22—C23—C18 | 2.0 (2) |
C9—C8—C11—C10 | 0.53 (17) | C21—C22—C23—N2 | −179.06 (14) |
N1—C10—C11—C8 | 6.65 (15) | C19—C18—C23—C22 | −2.7 (2) |
C18—C10—C11—C8 | 131.18 (13) | C10—C18—C23—C22 | 173.37 (13) |
C17—C10—C11—C8 | −110.43 (14) | C19—C18—C23—N2 | 178.20 (13) |
N1—C10—C11—C12 | 179.36 (12) | C10—C18—C23—N2 | −5.73 (16) |
C18—C10—C11—C12 | −56.11 (18) | C17—N2—C23—C22 | −178.43 (15) |
C17—C10—C11—C12 | 62.28 (18) | C17—N2—C23—C18 | 0.59 (17) |
C8—C11—C12—O2 | 170.65 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···O2i | 0.903 (19) | 2.249 (19) | 3.1410 (16) | 169.7 (17) |
N2—H1N2···O4ii | 0.89 (2) | 1.97 (2) | 2.8346 (18) | 165 (2) |
O4—H1O4···N1 | 0.93 (3) | 1.88 (3) | 2.8085 (18) | 174 (2) |
C13—H13B···O1 | 0.99 | 2.56 | 3.1919 (18) | 121 |
C19—H19A···O3i | 0.95 | 2.57 | 3.3368 (18) | 138 |
Symmetry codes: (i) −x+1, y−1/2, −z+3/2; (ii) −x+1, −y+2, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C23H20N2O3·CH4O |
Mr | 404.45 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 10.8485 (2), 11.9605 (2), 16.5705 (3) |
β (°) | 111.246 (1) |
V (Å3) | 2003.95 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.32 × 0.20 × 0.11 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.971, 0.990 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 23197, 5871, 4460 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.705 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.135, 1.03 |
No. of reflections | 5871 |
No. of parameters | 286 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.63, −0.45 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···O2i | 0.903 (19) | 2.249 (19) | 3.1410 (16) | 169.7 (17) |
N2—H1N2···O4ii | 0.89 (2) | 1.97 (2) | 2.8346 (18) | 165 (2) |
O4—H1O4···N1 | 0.93 (3) | 1.88 (3) | 2.8085 (18) | 174 (2) |
C13—H13B···O1 | 0.9900 | 2.5600 | 3.1919 (18) | 121.00 |
C19—H19A···O3i | 0.9500 | 2.5700 | 3.3368 (18) | 138.00 |
Symmetry codes: (i) −x+1, y−1/2, −z+3/2; (ii) −x+1, −y+2, −z+2. |
Acknowledgements
HAW gratefully acknowledges the Malaysian Ministry of Science, Technology and Innovation for funding for the synthesis work (grant Nos. 09-05-lfn-meb-004 and 304/PFARMASI/650545/I121). GS and SVK thank the management and administration of Karunya University for their encouragement and support. HKF thanks USM for a Research University grant (No. 1001/PFIZIK/811160).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Naphthoquinones are known to possess various biological activities such as cyto-toxicity as well as antibacterial, antifungal, antiviral, insecticidal, anti-inflammatory, and antipyretic (Babula et al., 2007) properties. Recently, there have been a few efforts to conduct 1,3-cycloaddition involving naphthoquinones (Chen et al., 2011; Silva et al., 2002).
In the title compound, Fig. 1, the hexahydro-1H-benzo[f]isoindole (N1/C1–C12) and indoline (N2/C10/C17–C23) rings are planar with the maximum deviations of 0.092 (1) Å from atom N1 and -0.095 (1) Å from atom C10. The two rings make a dihedral angle of 88.03 (4)°. An O4—H1O4···N1 interaction links the main molecule with the methanol solvent molecule. An intramolecular interaction of C13—H13B···O1 forms an S(6) ring motif (Fig. 1).
In the crystal, the molecules form two-dimensional layers parallel to the bc-plane through the intermolecular interactions of N1—H1N1···O2i, N2—H1N2···O4ii and C19—H19A···O3i (Fig. 2).