organic compounds
4-Isopropyl-5,5-dimethyl-2-sulfanyl-1,3,2-dioxaphosphinane 2-sulfide
aSchool of Studies in Chemistry, Jiwaji University, Gwalior 474 011, India, and bDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC 20059, USA
*Correspondence e-mail: rbutcher99@yahoo.com
The title compound, C8H17O2PS2, displays a distorted tetrahedral geometry around the P atom. The P atom is part of a six-membered ring with an isopropyl group in the equatorial position. The molecules are linked by S—H⋯S hydrogen bonds in the crystal packing.
Related literature
For dithiophosphoric acid ligands that form metal complexes, see: Srivastava et al. (2010). For applications as lubricating oil additives and load-carrying capacitors, see: Jiang et al. (1996); Haire et al. (2008); Plaza et al. (2001). For a related structure, see: Li et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2011); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812030188/bt5962sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812030188/bt5962Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812030188/bt5962Isup3.cml
4-Isopropyl-2-mercapto-5,5-dimethyl-1,3,2-dioxaphosphinane 2-sulfide was prepared by the reaction of P4S10 (4.44 g, 0.01 mol) with O.O'-2,2,4-trimethyl-1,3- pentanediol(0.02 g, 0.02 mol) with stirring. The reaction was carried out in moisture free anhydrous condition and in presence of dry nitrogen. The P4S10 was slowly dissolved in glycol solution (in dry benzene) with evolution of H2S.The reaction mixture was warmed gently on water bath (60 - 80 °C) in order to complete the reaction. After cooling, an yellow viscous liquid was obtained which crystallizes in deep freezer overnight. White crystal suitable for X-ray analysis was obtained in 60% yield. (M.P.: 336 K). Anal. Calc. for C8H17O2PS2 (%): C,39.98; H, 7.13. Found: C 39.84; H, 7.05.
All H atoms were located by a Fourier map. Nevertheless, they were placed in their calculated positions and then refined using the riding model with atom—H lengths of 1.00 Å (CH),0.99 Å (CH2) or 0.98 Å (CH3). Isotropic displacement parameters for these atoms were set to 1.2 (CH or CH2) or 1.5 (CH3) times Ueq of the parent atom. The torsions angles O-P-S-H of the S-H group and C-C-C-H for the methyl groups were refined.
Data collection: CrysAlis PRO (Agilent, 2011); cell
CrysAlis PRO (Agilent, 2011); data reduction: CrysAlis PRO (Agilent, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C8H17O2PS2 | F(000) = 512 |
Mr = 240.31 | Dx = 1.311 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3599 reflections |
a = 8.2831 (2) Å | θ = 3.1–35.0° |
b = 13.1532 (4) Å | µ = 0.54 mm−1 |
c = 11.5255 (3) Å | T = 123 K |
β = 104.128 (3)° | Long plate, colorless |
V = 1217.72 (6) Å3 | 0.65 × 0.2 × 0.1 mm |
Z = 4 |
Agilent Xcalibur Ruby Gemini diffractometer | 4979 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 3999 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 35.0°, θmin = 3.1° |
ω scans | h = −13→12 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | k = −17→21 |
Tmin = 0.872, Tmax = 1.000 | l = −18→17 |
10444 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.094 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0372P)2 + 0.2639P] where P = (Fo2 + 2Fc2)/3 |
4979 reflections | (Δ/σ)max = 0.001 |
123 parameters | Δρmax = 0.45 e Å−3 |
0 restraints | Δρmin = −0.38 e Å−3 |
C8H17O2PS2 | V = 1217.72 (6) Å3 |
Mr = 240.31 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.2831 (2) Å | µ = 0.54 mm−1 |
b = 13.1532 (4) Å | T = 123 K |
c = 11.5255 (3) Å | 0.65 × 0.2 × 0.1 mm |
β = 104.128 (3)° |
Agilent Xcalibur Ruby Gemini diffractometer | 4979 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | 3999 reflections with I > 2σ(I) |
Tmin = 0.872, Tmax = 1.000 | Rint = 0.024 |
10444 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.094 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.45 e Å−3 |
4979 reflections | Δρmin = −0.38 e Å−3 |
123 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
P | 0.80019 (4) | 0.22223 (2) | 0.26248 (3) | 0.01693 (7) | |
S1 | 0.89229 (5) | 0.16081 (3) | 0.43126 (3) | 0.02970 (9) | |
H1S | 0.8790 | 0.2219 | 0.5057 | 0.036* | |
S2 | 0.81069 (4) | 0.12077 (3) | 0.14460 (3) | 0.02277 (8) | |
O1 | 0.90574 (11) | 0.31992 (7) | 0.24915 (9) | 0.02352 (19) | |
O2 | 0.61912 (10) | 0.26399 (7) | 0.25326 (8) | 0.01907 (17) | |
C1 | 0.87839 (16) | 0.41289 (10) | 0.31086 (13) | 0.0249 (3) | |
H1A | 0.9469 | 0.4682 | 0.2895 | 0.030* | |
H1B | 0.9153 | 0.4019 | 0.3983 | 0.030* | |
C2 | 0.69484 (16) | 0.44550 (10) | 0.27866 (12) | 0.0207 (2) | |
C3 | 0.6409 (2) | 0.47148 (12) | 0.14512 (13) | 0.0303 (3) | |
H3A | 0.7253 | 0.5148 | 0.1235 | 0.046* | |
H3B | 0.5342 | 0.5076 | 0.1284 | 0.046* | |
H3C | 0.6287 | 0.4087 | 0.0980 | 0.046* | |
C4 | 0.68450 (19) | 0.54015 (11) | 0.35475 (13) | 0.0288 (3) | |
H4A | 0.7635 | 0.5915 | 0.3409 | 0.043* | |
H4B | 0.7121 | 0.5214 | 0.4396 | 0.043* | |
H4C | 0.5713 | 0.5679 | 0.3322 | 0.043* | |
C5 | 0.59607 (15) | 0.35802 (9) | 0.31797 (11) | 0.0182 (2) | |
H5A | 0.6488 | 0.3453 | 0.4045 | 0.022* | |
C6 | 0.40844 (16) | 0.36803 (11) | 0.30692 (12) | 0.0231 (3) | |
H6A | 0.3888 | 0.4362 | 0.3394 | 0.028* | |
C7 | 0.29883 (18) | 0.36110 (15) | 0.17915 (14) | 0.0349 (3) | |
H7A | 0.1813 | 0.3621 | 0.1814 | 0.052* | |
H7B | 0.3230 | 0.2977 | 0.1421 | 0.052* | |
H7C | 0.3220 | 0.4191 | 0.1323 | 0.052* | |
C8 | 0.35565 (18) | 0.28763 (13) | 0.38615 (14) | 0.0317 (3) | |
H8A | 0.2379 | 0.2970 | 0.3849 | 0.048* | |
H8B | 0.4232 | 0.2946 | 0.4684 | 0.048* | |
H8C | 0.3720 | 0.2197 | 0.3559 | 0.048* |
U11 | U22 | U33 | U12 | U13 | U23 | |
P | 0.01539 (13) | 0.01640 (14) | 0.01950 (14) | 0.00176 (11) | 0.00521 (11) | 0.00062 (11) |
S1 | 0.03645 (18) | 0.03029 (19) | 0.02098 (15) | 0.00996 (15) | 0.00431 (14) | 0.00425 (13) |
S2 | 0.02690 (15) | 0.02011 (15) | 0.02217 (15) | 0.00522 (12) | 0.00769 (12) | −0.00132 (12) |
O1 | 0.0191 (4) | 0.0197 (4) | 0.0342 (5) | −0.0022 (3) | 0.0112 (4) | −0.0017 (4) |
O2 | 0.0157 (3) | 0.0167 (4) | 0.0256 (4) | 0.0003 (3) | 0.0065 (3) | −0.0032 (3) |
C1 | 0.0226 (5) | 0.0190 (6) | 0.0339 (7) | −0.0054 (5) | 0.0084 (5) | −0.0030 (5) |
C2 | 0.0238 (5) | 0.0150 (5) | 0.0236 (5) | −0.0003 (4) | 0.0065 (5) | −0.0002 (5) |
C3 | 0.0390 (8) | 0.0260 (7) | 0.0273 (6) | 0.0021 (6) | 0.0106 (6) | 0.0053 (6) |
C4 | 0.0352 (7) | 0.0171 (6) | 0.0344 (7) | −0.0012 (5) | 0.0092 (6) | −0.0038 (5) |
C5 | 0.0186 (5) | 0.0160 (5) | 0.0204 (5) | 0.0010 (4) | 0.0055 (4) | −0.0015 (4) |
C6 | 0.0186 (5) | 0.0234 (6) | 0.0282 (6) | 0.0027 (5) | 0.0074 (5) | −0.0043 (5) |
C7 | 0.0197 (6) | 0.0500 (10) | 0.0332 (7) | 0.0035 (6) | 0.0027 (5) | 0.0027 (7) |
C8 | 0.0263 (6) | 0.0393 (8) | 0.0332 (7) | −0.0052 (6) | 0.0141 (6) | −0.0030 (6) |
P—O2 | 1.5762 (9) | C3—H3C | 0.9800 |
P—O1 | 1.5826 (10) | C4—H4A | 0.9800 |
P—S2 | 1.9216 (5) | C4—H4B | 0.9800 |
P—S1 | 2.0723 (5) | C4—H4C | 0.9800 |
S1—H1S | 1.2000 | C5—C6 | 1.5337 (17) |
O1—C1 | 1.4599 (17) | C5—H5A | 1.0000 |
O2—C5 | 1.4804 (15) | C6—C8 | 1.529 (2) |
C1—C2 | 1.5355 (18) | C6—C7 | 1.533 (2) |
C1—H1A | 0.9900 | C6—H6A | 1.0000 |
C1—H1B | 0.9900 | C7—H7A | 0.9800 |
C2—C3 | 1.5328 (19) | C7—H7B | 0.9800 |
C2—C4 | 1.5372 (18) | C7—H7C | 0.9800 |
C2—C5 | 1.5426 (18) | C8—H8A | 0.9800 |
C3—H3A | 0.9800 | C8—H8B | 0.9800 |
C3—H3B | 0.9800 | C8—H8C | 0.9800 |
O2—P—O1 | 104.46 (5) | H4A—C4—H4B | 109.5 |
O2—P—S2 | 113.64 (4) | C2—C4—H4C | 109.5 |
O1—P—S2 | 111.95 (4) | H4A—C4—H4C | 109.5 |
O2—P—S1 | 108.99 (4) | H4B—C4—H4C | 109.5 |
O1—P—S1 | 108.79 (4) | O2—C5—C6 | 106.41 (10) |
S2—P—S1 | 108.85 (2) | O2—C5—C2 | 109.41 (10) |
P—S1—H1S | 109.5 | C6—C5—C2 | 120.72 (11) |
C1—O1—P | 118.53 (8) | O2—C5—H5A | 106.5 |
C5—O2—P | 119.65 (7) | C6—C5—H5A | 106.5 |
O1—C1—C2 | 112.24 (10) | C2—C5—H5A | 106.5 |
O1—C1—H1A | 109.2 | C8—C6—C7 | 110.12 (12) |
C2—C1—H1A | 109.2 | C8—C6—C5 | 108.83 (11) |
O1—C1—H1B | 109.2 | C7—C6—C5 | 115.18 (11) |
C2—C1—H1B | 109.2 | C8—C6—H6A | 107.5 |
H1A—C1—H1B | 107.9 | C7—C6—H6A | 107.5 |
C3—C2—C1 | 109.50 (11) | C5—C6—H6A | 107.5 |
C3—C2—C4 | 110.43 (11) | C6—C7—H7A | 109.5 |
C1—C2—C4 | 106.15 (11) | C6—C7—H7B | 109.5 |
C3—C2—C5 | 114.56 (11) | H7A—C7—H7B | 109.5 |
C1—C2—C5 | 106.59 (10) | C6—C7—H7C | 109.5 |
C4—C2—C5 | 109.22 (11) | H7A—C7—H7C | 109.5 |
C2—C3—H3A | 109.5 | H7B—C7—H7C | 109.5 |
C2—C3—H3B | 109.5 | C6—C8—H8A | 109.5 |
H3A—C3—H3B | 109.5 | C6—C8—H8B | 109.5 |
C2—C3—H3C | 109.5 | H8A—C8—H8B | 109.5 |
H3A—C3—H3C | 109.5 | C6—C8—H8C | 109.5 |
H3B—C3—H3C | 109.5 | H8A—C8—H8C | 109.5 |
C2—C4—H4A | 109.5 | H8B—C8—H8C | 109.5 |
C2—C4—H4B | 109.5 | ||
O2—P—O1—C1 | 41.56 (10) | P—O2—C5—C2 | 56.81 (12) |
S2—P—O1—C1 | 164.95 (8) | C3—C2—C5—O2 | 61.00 (14) |
S1—P—O1—C1 | −74.71 (9) | C1—C2—C5—O2 | −60.27 (13) |
O1—P—O2—C5 | −43.49 (10) | C4—C2—C5—O2 | −174.55 (10) |
S2—P—O2—C5 | −165.77 (7) | C3—C2—C5—C6 | −62.90 (16) |
S1—P—O2—C5 | 72.65 (9) | C1—C2—C5—C6 | 175.83 (11) |
P—O1—C1—C2 | −54.83 (14) | C4—C2—C5—C6 | 61.55 (15) |
O1—C1—C2—C3 | −63.68 (14) | O2—C5—C6—C8 | 72.23 (13) |
O1—C1—C2—C4 | 177.11 (11) | C2—C5—C6—C8 | −162.46 (12) |
O1—C1—C2—C5 | 60.77 (14) | O2—C5—C6—C7 | −51.96 (15) |
P—O2—C5—C6 | −171.25 (8) | C2—C5—C6—C7 | 73.35 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
S1—H1S···S2i | 1.20 | 2.76 | 3.9456 (5) | 170 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C8H17O2PS2 |
Mr | 240.31 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 123 |
a, b, c (Å) | 8.2831 (2), 13.1532 (4), 11.5255 (3) |
β (°) | 104.128 (3) |
V (Å3) | 1217.72 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.54 |
Crystal size (mm) | 0.65 × 0.2 × 0.1 |
Data collection | |
Diffractometer | Agilent Xcalibur Ruby Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2011) |
Tmin, Tmax | 0.872, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10444, 4979, 3999 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.808 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.094, 1.09 |
No. of reflections | 4979 |
No. of parameters | 123 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.45, −0.38 |
Computer programs: CrysAlis PRO (Agilent, 2011), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
S1—H1S···S2i | 1.20 | 2.76 | 3.9456 (5) | 170.0 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
Acknowledgements
SKS and PS are grateful to UGC, New Delhi, India, for financial assistance (grant No. F.36–123/2008(SR)). RJB acknowledges the NSF–MRI program (grant No. CHE0619278) for funds to purchase the X-ray diffractometer. SKG wishes to acknowledge the USIEF for the award of a Fulbright-Nehru Senior Research Fellowship.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Organo-phosphorus compounds with sulfur donors have recently drawn more attention due to their adjustable coordination ability and interesting applications as high viscosity lubricant additives(Jiang et al., 1996; Haire et al., 2008) and load carrying capacity (Plaza et al., 2001). As part of our investigation on the organotin dithio complexes (Srivastava et al., 2010), we herein report the synthesis and structure of I.
The crystal structure of I is illustrated in Fig.1. The conformation of the molecule with respect to P is distorted tetrahedral as reflected by torsion angles O2—P—O1—C1, S2—P—O2—C5 and S1—P—O1—C1 of 41.57 (10), -165.77 (7) and -74.71 (9)° respectively. The phosphorus atom is coordinated by both sulfur and oxygen atoms with the formation of a six-membered ring. The isopropyl group is in equatorial position as indicated by bond angles C5—C6—C8 [108.83 (11)°], C5—C6—C7 [115.18 (11)°] and C7—C6—C8 [110.12 (12)°]. The P—S1, P—S2 and mean P—O distances are 2.0723 (5), 1.9216 (4) and 1.5794 (9) Å, respectively, which are comparable to reported values (Li et al., 2007). The molecules are stabilized by S—H···S intermolecular hydrogen bonds in the crystal packing (Table 1; Fig.2).