organic compounds
2,3-Dibromo-3-(4-chlorophenyl)-1-(4-nitrothiophen-2-yl)propan-1-one
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Studies in Chemistry, Mangalore University, Mangalagangothri 574 199, Karnataka, India
*Correspondence e-mail: hkfun@usm.my
The title compound, C13H8Br2ClNO3S, exhibits whole-molecule disorder over two orientations in a 0.805 (6):0.195 (6) ratio. The dihedral angles between the thiophene ring [maximum deviations = 0.017 (4) and 0.033 (9) Å for the major and minor components, respectively] and the chloro-substituted phenyl ring are 32.1 (5) (major component) and 26.3 (18)° (minor component). In the crystal, C—H⋯Cl and C—H⋯O hydrogen bonds link the molecules into sheets lying parallel to the bc plane. Aromatic π–π stacking interactions [centroid–centroid distance = 3.550 (7) Å] are also observed.
Related literature
For background to nitrothiophene derivatives, see: Holla et al. (1986); Kalluraya et al. (1994); Kalluraya & Shetty (1997); Rai et al. (2008). For related structures, see: Fun et al. (2010, 2011). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536812034551/hb6917sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812034551/hb6917Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812034551/hb6917Isup3.cml
3-(4-Chlorophenyl)-1-(4-nitrothiophen-2-yl)prop-2-en-1-one (0.01 mol) was dissolved in glacial acetic acid (25 ml) by gentle warming. A solution of bromine in glacial acetic acid (30% w/v) was added to it with constant stirring until the yellow color of the bromine persisted. The reaction mixture was kept aside at room temperature for overnight. Crystals of dibromopropanone that separated out were collected by filtration and washed with petroleum ether and dried. They were then recrystallized from glacial acetic acid. Colourless blocks were obtained from 1:2 mixtures of DMF and ethanol solution by slow evaporation.
The title compound is disordered over two sets of positions with a refined site-occupancies ratio of 0.805 (6): 0.195 (6). The minor disorder component was refined isotropically. All disordered atoms were subjected to similarity restraints (SAME) except for atoms Br1X, Br2X, C7X and C8X. The similar-ADP restraint (SIMU) was applied to all atoms in the molecule. A FLAT restraint was also used to the minor component of the chloro-phenyl ring (Cl1X/C1X–C6X). All H atoms were positioned geometrically [C–H = 0.95 and 1.00 Å] and refined using a riding model with Uiso(H) = 1.2 Ueq(C).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C13H8Br2ClNO3S | F(000) = 1760 |
Mr = 453.53 | Dx = 1.991 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 9951 reflections |
a = 28.5425 (17) Å | θ = 2.8–31.4° |
b = 9.5470 (5) Å | µ = 5.68 mm−1 |
c = 11.4047 (7) Å | T = 100 K |
β = 103.224 (2)° | Block, colourless |
V = 3025.3 (3) Å3 | 0.31 × 0.24 × 0.11 mm |
Z = 8 |
Bruker SMART APEX DUO CCD diffractometer | 5031 independent reflections |
Radiation source: fine-focus sealed tube | 4272 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.057 |
ϕ and ω scans | θmax = 31.6°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −41→41 |
Tmin = 0.269, Tmax = 0.564 | k = −14→14 |
33329 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0628P)2 + 5.4597P] where P = (Fo2 + 2Fc2)/3 |
5031 reflections | (Δ/σ)max = 0.001 |
275 parameters | Δρmax = 1.33 e Å−3 |
504 restraints | Δρmin = −0.75 e Å−3 |
C13H8Br2ClNO3S | V = 3025.3 (3) Å3 |
Mr = 453.53 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 28.5425 (17) Å | µ = 5.68 mm−1 |
b = 9.5470 (5) Å | T = 100 K |
c = 11.4047 (7) Å | 0.31 × 0.24 × 0.11 mm |
β = 103.224 (2)° |
Bruker SMART APEX DUO CCD diffractometer | 5031 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4272 reflections with I > 2σ(I) |
Tmin = 0.269, Tmax = 0.564 | Rint = 0.057 |
33329 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 504 restraints |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.11 | Δρmax = 1.33 e Å−3 |
5031 reflections | Δρmin = −0.75 e Å−3 |
275 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Br1 | 0.30443 (7) | 0.1934 (2) | 0.09470 (18) | 0.0220 (2) | 0.805 (6) |
Br2 | 0.45859 (4) | 0.04291 (14) | 0.08975 (14) | 0.0328 (3) | 0.805 (6) |
Cl1 | 0.46000 (9) | 0.7011 (2) | 0.3575 (2) | 0.0325 (4) | 0.805 (6) |
S1 | 0.31346 (12) | −0.2888 (4) | −0.0725 (3) | 0.0278 (8) | 0.805 (6) |
O1 | 0.35091 (17) | −0.0087 (5) | −0.1008 (4) | 0.0250 (8) | 0.805 (6) |
O2 | 0.2644 (3) | −0.5160 (6) | 0.2173 (6) | 0.0280 (10) | 0.805 (6) |
O3 | 0.3097 (3) | −0.3704 (7) | 0.3399 (4) | 0.0359 (11) | 0.805 (6) |
N1 | 0.29043 (19) | −0.4130 (6) | 0.2375 (4) | 0.0219 (9) | 0.805 (6) |
C9 | 0.34861 (14) | −0.0298 (3) | 0.0020 (3) | 0.0196 (7) | 0.805 (6) |
C10 | 0.33008 (15) | −0.1624 (4) | 0.0378 (3) | 0.0186 (8) | 0.805 (6) |
C11 | 0.32325 (14) | −0.2035 (4) | 0.1496 (4) | 0.0191 (8) | 0.805 (6) |
H11B | 0.3313 | −0.1501 | 0.2217 | 0.023* | 0.805 (6) |
C12 | 0.3022 (2) | −0.3397 (6) | 0.1375 (4) | 0.0199 (9) | 0.805 (6) |
C13 | 0.2942 (8) | −0.3972 (12) | 0.0240 (6) | 0.0211 (14) | 0.805 (6) |
H13B | 0.2797 | −0.4860 | 0.0026 | 0.025* | 0.805 (6) |
C1 | 0.40955 (16) | 0.4341 (4) | 0.0905 (4) | 0.0228 (9) | 0.805 (6) |
H1BA | 0.3958 | 0.4389 | 0.0064 | 0.027* | 0.805 (6) |
C2 | 0.4226 (2) | 0.5568 (6) | 0.1542 (5) | 0.0246 (9) | 0.805 (6) |
H2A | 0.4178 | 0.6452 | 0.1149 | 0.029* | 0.805 (6) |
C3 | 0.4427 (4) | 0.5479 (5) | 0.2764 (5) | 0.0226 (9) | 0.805 (6) |
C4 | 0.44978 (18) | 0.4192 (5) | 0.3367 (4) | 0.0242 (9) | 0.805 (6) |
H4BA | 0.4636 | 0.4150 | 0.4207 | 0.029* | 0.805 (6) |
C5 | 0.43608 (16) | 0.2978 (4) | 0.2707 (4) | 0.0239 (7) | 0.805 (6) |
H5A | 0.4403 | 0.2095 | 0.3101 | 0.029* | 0.805 (6) |
C6 | 0.41604 (14) | 0.3040 (3) | 0.1464 (3) | 0.0202 (6) | 0.805 (6) |
C7 | 0.40208 (11) | 0.1763 (3) | 0.0704 (3) | 0.0195 (6) | 0.805 (6) |
H7BA | 0.3919 | 0.2052 | −0.0159 | 0.023* | 0.805 (6) |
C8 | 0.36384 (11) | 0.0820 (3) | 0.1003 (3) | 0.0186 (6) | 0.805 (6) |
H8BA | 0.3754 | 0.0376 | 0.1812 | 0.022* | 0.805 (6) |
Br1X | 0.3073 (3) | 0.1867 (8) | 0.1063 (7) | 0.0159 (8)* | 0.195 (6) |
Br2X | 0.45697 (15) | 0.0543 (4) | 0.0743 (4) | 0.0118 (6)* | 0.195 (6) |
Cl1X | 0.4684 (3) | 0.6876 (9) | 0.3684 (9) | 0.0225 (15)* | 0.195 (6) |
S1X | 0.3131 (3) | −0.2879 (11) | −0.0739 (10) | 0.0085 (17)* | 0.195 (6) |
O1X | 0.3601 (6) | −0.023 (2) | −0.1041 (15) | 0.016 (3)* | 0.195 (6) |
O2X | 0.2680 (13) | −0.499 (3) | 0.225 (3) | 0.035 (5)* | 0.195 (6) |
O3X | 0.3116 (13) | −0.348 (3) | 0.343 (2) | 0.041 (5)* | 0.195 (6) |
N1X | 0.2988 (10) | −0.408 (3) | 0.2442 (19) | 0.023 (3)* | 0.195 (6) |
C9X | 0.3611 (6) | −0.0443 (15) | −0.0001 (15) | 0.018 (2)* | 0.195 (6) |
C10X | 0.3400 (7) | −0.1710 (17) | 0.0376 (15) | 0.018 (3)* | 0.195 (6) |
C11X | 0.3338 (7) | −0.208 (2) | 0.1501 (16) | 0.019 (3)* | 0.195 (6) |
H11A | 0.3440 | −0.1547 | 0.2218 | 0.023* | 0.195 (6) |
C12X | 0.3095 (12) | −0.338 (3) | 0.1411 (19) | 0.020 (2)* | 0.195 (6) |
C13X | 0.298 (3) | −0.396 (5) | 0.028 (2) | 0.021 (3)* | 0.195 (6) |
H13A | 0.2827 | −0.4853 | 0.0091 | 0.026* | 0.195 (6) |
C1X | 0.4024 (8) | 0.4497 (18) | 0.0976 (19) | 0.022 (3)* | 0.195 (6) |
H1A | 0.3894 | 0.4634 | 0.0141 | 0.027* | 0.195 (6) |
C2X | 0.4233 (8) | 0.561 (2) | 0.168 (2) | 0.025 (3)* | 0.195 (6) |
H2BA | 0.4233 | 0.6515 | 0.1337 | 0.030* | 0.195 (6) |
C3X | 0.4443 (17) | 0.539 (2) | 0.288 (2) | 0.024 (3)* | 0.195 (6) |
C4X | 0.4420 (9) | 0.410 (2) | 0.343 (2) | 0.024 (3)* | 0.195 (6) |
H4A | 0.4535 | 0.3983 | 0.4277 | 0.029* | 0.195 (6) |
C5X | 0.4221 (6) | 0.2990 (17) | 0.2698 (14) | 0.022 (2)* | 0.195 (6) |
H5BA | 0.4232 | 0.2075 | 0.3030 | 0.027* | 0.195 (6) |
C6X | 0.4003 (6) | 0.3189 (15) | 0.1474 (14) | 0.023 (2)* | 0.195 (6) |
C7X | 0.3736 (5) | 0.1993 (13) | 0.0709 (13) | 0.022 (2)* | 0.195 (6) |
H7A | 0.3712 | 0.2173 | −0.0167 | 0.026* | 0.195 (6) |
C8X | 0.3891 (5) | 0.0534 (14) | 0.1024 (14) | 0.024 (2)* | 0.195 (6) |
H8A | 0.3871 | 0.0244 | 0.1854 | 0.029* | 0.195 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0208 (4) | 0.0242 (4) | 0.0211 (5) | 0.0032 (2) | 0.0050 (3) | −0.0006 (3) |
Br2 | 0.0255 (2) | 0.0390 (4) | 0.0325 (6) | 0.0105 (2) | 0.0038 (3) | −0.0058 (3) |
Cl1 | 0.0392 (10) | 0.0234 (6) | 0.0339 (8) | −0.0051 (6) | 0.0061 (7) | −0.0101 (5) |
S1 | 0.0432 (11) | 0.0217 (7) | 0.0185 (7) | −0.0039 (3) | 0.0069 (4) | −0.0021 (3) |
O1 | 0.030 (2) | 0.0236 (15) | 0.0216 (14) | 0.0009 (14) | 0.0072 (13) | 0.0021 (10) |
O2 | 0.040 (2) | 0.0171 (17) | 0.031 (2) | −0.0044 (12) | 0.0148 (15) | 0.0032 (14) |
O3 | 0.061 (2) | 0.035 (2) | 0.0115 (13) | −0.0088 (19) | 0.0079 (12) | 0.0039 (12) |
N1 | 0.027 (2) | 0.0211 (14) | 0.0198 (14) | 0.0022 (16) | 0.0091 (14) | 0.0028 (11) |
C9 | 0.0198 (15) | 0.0191 (13) | 0.0197 (14) | 0.0005 (11) | 0.0043 (12) | −0.0030 (10) |
C10 | 0.0210 (18) | 0.0182 (13) | 0.0167 (14) | 0.0012 (12) | 0.0042 (13) | −0.0014 (10) |
C11 | 0.0191 (18) | 0.0176 (12) | 0.0204 (15) | 0.0010 (13) | 0.0040 (13) | −0.0006 (10) |
C12 | 0.024 (3) | 0.0178 (12) | 0.0185 (14) | 0.0002 (14) | 0.0063 (14) | 0.0004 (10) |
C13 | 0.028 (4) | 0.0171 (13) | 0.0187 (15) | 0.0002 (14) | 0.0058 (17) | −0.0003 (11) |
C1 | 0.0227 (18) | 0.0226 (15) | 0.0231 (16) | 0.0032 (12) | 0.0048 (13) | −0.0021 (12) |
C2 | 0.0262 (15) | 0.0213 (14) | 0.026 (2) | 0.0008 (10) | 0.0051 (14) | −0.0017 (13) |
C3 | 0.0257 (16) | 0.0191 (14) | 0.0224 (19) | −0.0040 (14) | 0.0038 (16) | −0.0066 (13) |
C4 | 0.025 (2) | 0.0268 (15) | 0.0207 (16) | −0.0038 (13) | 0.0048 (14) | −0.0034 (12) |
C5 | 0.0247 (17) | 0.0219 (13) | 0.0238 (16) | −0.0002 (13) | 0.0030 (14) | −0.0018 (11) |
C6 | 0.0194 (14) | 0.0200 (13) | 0.0208 (14) | −0.0001 (10) | 0.0041 (12) | −0.0020 (10) |
C7 | 0.0209 (13) | 0.0196 (12) | 0.0182 (14) | 0.0017 (9) | 0.0052 (10) | −0.0009 (10) |
C8 | 0.0224 (13) | 0.0158 (11) | 0.0173 (13) | −0.0007 (10) | 0.0042 (10) | 0.0005 (10) |
Br1—C8 | 1.990 (4) | Br1X—C7X | 2.029 (16) |
Br2—C7 | 2.027 (3) | Br2X—C8X | 2.034 (16) |
Cl1—C3 | 1.741 (4) | Cl1X—C3X | 1.742 (14) |
S1—C13 | 1.691 (5) | S1X—C13X | 1.687 (15) |
S1—C10 | 1.730 (4) | S1X—C10X | 1.733 (14) |
O1—C9 | 1.206 (5) | O1X—C9X | 1.198 (15) |
O2—N1 | 1.223 (5) | O2X—N1X | 1.216 (15) |
O3—N1 | 1.239 (5) | O3X—N1X | 1.240 (16) |
N1—C12 | 1.441 (4) | N1X—C12X | 1.444 (14) |
C9—C10 | 1.466 (4) | C9X—C10X | 1.459 (14) |
C9—C8 | 1.537 (4) | C9X—C8X | 1.56 (2) |
C10—C11 | 1.390 (5) | C10X—C11X | 1.381 (15) |
C11—C12 | 1.426 (5) | C11X—C12X | 1.419 (15) |
C11—H11B | 0.9500 | C11X—H11A | 0.9500 |
C12—C13 | 1.377 (5) | C12X—C13X | 1.376 (15) |
C13—H13B | 0.9500 | C13X—H13A | 0.9500 |
C1—C2 | 1.384 (5) | C1X—C6X | 1.378 (15) |
C1—C6 | 1.389 (5) | C1X—C2X | 1.379 (15) |
C1—H1BA | 0.9500 | C1X—H1A | 0.9500 |
C2—C3 | 1.383 (5) | C2X—C3X | 1.378 (15) |
C2—H2A | 0.9500 | C2X—H2BA | 0.9500 |
C3—C4 | 1.400 (5) | C3X—C4X | 1.395 (15) |
C4—C5 | 1.389 (5) | C4X—C5X | 1.390 (15) |
C4—H4BA | 0.9500 | C4X—H4A | 0.9500 |
C5—C6 | 1.403 (5) | C5X—C6X | 1.404 (15) |
C5—H5A | 0.9500 | C5X—H5BA | 0.9500 |
C6—C7 | 1.496 (4) | C6X—C7X | 1.531 (19) |
C7—C8 | 1.513 (4) | C7X—C8X | 1.480 (19) |
C7—H7BA | 1.0000 | C7X—H7A | 1.0000 |
C8—H8BA | 1.0000 | C8X—H8A | 1.0000 |
C13—S1—C10 | 91.7 (3) | C13X—S1X—C10X | 91.9 (9) |
O2—N1—O3 | 124.1 (5) | O2X—N1X—O3X | 123 (2) |
O2—N1—C12 | 118.8 (4) | O2X—N1X—C12X | 117 (2) |
O3—N1—C12 | 116.9 (4) | O3X—N1X—C12X | 116.6 (19) |
O1—C9—C10 | 121.2 (4) | O1X—C9X—C10X | 121.2 (16) |
O1—C9—C8 | 121.6 (3) | O1X—C9X—C8X | 121.9 (15) |
C10—C9—C8 | 117.2 (3) | C10X—C9X—C8X | 116.7 (13) |
C11—C10—C9 | 129.4 (3) | C11X—C10X—C9X | 129.4 (14) |
C11—C10—S1 | 113.5 (3) | C11X—C10X—S1X | 112.8 (11) |
C9—C10—S1 | 117.1 (3) | C9X—C10X—S1X | 117.4 (11) |
C10—C11—C12 | 108.2 (3) | C10X—C11X—C12X | 108.8 (13) |
C10—C11—H11B | 125.9 | C10X—C11X—H11A | 125.6 |
C12—C11—H11B | 125.9 | C12X—C11X—H11A | 125.6 |
C13—C12—C11 | 115.5 (4) | C13X—C12X—C11X | 115.6 (14) |
C13—C12—N1 | 122.2 (4) | C13X—C12X—N1X | 121.8 (15) |
C11—C12—N1 | 122.4 (4) | C11X—C12X—N1X | 122.5 (16) |
C12—C13—S1 | 111.1 (3) | C12X—C13X—S1X | 110.5 (13) |
C12—C13—H13B | 124.5 | C12X—C13X—H13A | 124.7 |
S1—C13—H13B | 124.5 | S1X—C13X—H13A | 124.7 |
C2—C1—C6 | 121.6 (4) | C6X—C1X—C2X | 120.7 (17) |
C2—C1—H1BA | 119.2 | C6X—C1X—H1A | 119.6 |
C6—C1—H1BA | 119.2 | C2X—C1X—H1A | 119.6 |
C3—C2—C1 | 118.4 (4) | C3X—C2X—C1X | 119.6 (18) |
C3—C2—H2A | 120.8 | C3X—C2X—H2BA | 120.2 |
C1—C2—H2A | 120.8 | C1X—C2X—H2BA | 120.2 |
C2—C3—C4 | 122.0 (4) | C2X—C3X—C4X | 121.9 (15) |
C2—C3—Cl1 | 119.0 (4) | C2X—C3X—Cl1X | 115.6 (14) |
C4—C3—Cl1 | 119.0 (4) | C4X—C3X—Cl1X | 122.3 (15) |
C5—C4—C3 | 118.3 (4) | C5X—C4X—C3X | 117.1 (16) |
C5—C4—H4BA | 120.8 | C5X—C4X—H4A | 121.5 |
C3—C4—H4BA | 120.8 | C3X—C4X—H4A | 121.5 |
C4—C5—C6 | 120.8 (4) | C4X—C5X—C6X | 121.6 (15) |
C4—C5—H5A | 119.6 | C4X—C5X—H5BA | 119.2 |
C6—C5—H5A | 119.6 | C6X—C5X—H5BA | 119.2 |
C1—C6—C5 | 118.9 (3) | C1X—C6X—C5X | 118.7 (14) |
C1—C6—C7 | 118.2 (3) | C1X—C6X—C7X | 120.3 (14) |
C5—C6—C7 | 122.9 (3) | C5X—C6X—C7X | 121.0 (13) |
C6—C7—C8 | 117.7 (3) | C8X—C7X—C6X | 118.8 (12) |
C6—C7—Br2 | 110.4 (2) | C8X—C7X—Br1X | 97.8 (10) |
C8—C7—Br2 | 101.46 (19) | C6X—C7X—Br1X | 107.2 (10) |
C6—C7—H7BA | 108.9 | C8X—C7X—H7A | 110.7 |
C8—C7—H7BA | 108.9 | C6X—C7X—H7A | 110.7 |
Br2—C7—H7BA | 108.9 | Br1X—C7X—H7A | 110.7 |
C7—C8—C9 | 110.3 (3) | C7X—C8X—C9X | 107.9 (12) |
C7—C8—Br1 | 109.2 (2) | C7X—C8X—Br2X | 101.5 (9) |
C9—C8—Br1 | 104.5 (2) | C9X—C8X—Br2X | 103.1 (10) |
C7—C8—H8BA | 110.9 | C7X—C8X—H8A | 114.3 |
C9—C8—H8BA | 110.9 | C9X—C8X—H8A | 114.3 |
Br1—C8—H8BA | 110.9 | Br2X—C8X—H8A | 114.3 |
O1—C9—C10—C11 | −177.6 (4) | O1X—C9X—C10X—C11X | −173 (2) |
C8—C9—C10—C11 | 1.1 (6) | C8X—C9X—C10X—C11X | 12 (3) |
O1—C9—C10—S1 | 1.9 (6) | O1X—C9X—C10X—S1X | −1 (3) |
C8—C9—C10—S1 | −179.4 (3) | C8X—C9X—C10X—S1X | −174.9 (13) |
C13—S1—C10—C11 | 2.8 (9) | C13X—S1X—C10X—C11X | −5 (4) |
C13—S1—C10—C9 | −176.8 (9) | C13X—S1X—C10X—C9X | −179 (4) |
C9—C10—C11—C12 | 177.2 (4) | C9X—C10X—C11X—C12X | 177 (2) |
S1—C10—C11—C12 | −2.3 (5) | S1X—C10X—C11X—C12X | 4 (3) |
C10—C11—C12—C13 | 0.5 (12) | C10X—C11X—C12X—C13X | −1 (6) |
C10—C11—C12—N1 | 179.9 (5) | C10X—C11X—C12X—N1X | 178 (3) |
O2—N1—C12—C13 | −14.5 (14) | O2X—N1X—C12X—C13X | −20 (7) |
O3—N1—C12—C13 | 162.0 (13) | O3X—N1X—C12X—C13X | 179 (6) |
O2—N1—C12—C11 | 166.2 (7) | O2X—N1X—C12X—C11X | 162 (4) |
O3—N1—C12—C11 | −17.3 (9) | O3X—N1X—C12X—C11X | 1 (5) |
C11—C12—C13—S1 | 1.5 (17) | C11X—C12X—C13X—S1X | −3 (8) |
N1—C12—C13—S1 | −177.9 (8) | N1X—C12X—C13X—S1X | 178 (4) |
C10—S1—C13—C12 | −2.4 (14) | C10X—S1X—C13X—C12X | 5 (6) |
C6—C1—C2—C3 | 0.3 (8) | C6X—C1X—C2X—C3X | 3 (3) |
C1—C2—C3—C4 | −0.6 (13) | C1X—C2X—C3X—C4X | −5 (5) |
C1—C2—C3—Cl1 | 179.2 (5) | C1X—C2X—C3X—Cl1X | −178.7 (17) |
C2—C3—C4—C5 | 0.2 (13) | C2X—C3X—C4X—C5X | 7 (6) |
Cl1—C3—C4—C5 | −179.6 (5) | Cl1X—C3X—C4X—C5X | −180 (3) |
C3—C4—C5—C6 | 0.5 (8) | C3X—C4X—C5X—C6X | −7 (4) |
C2—C1—C6—C5 | 0.3 (6) | C2X—C1X—C6X—C5X | −3 (2) |
C2—C1—C6—C7 | −178.6 (4) | C2X—C1X—C6X—C7X | 175.2 (11) |
C4—C5—C6—C1 | −0.8 (6) | C4X—C5X—C6X—C1X | 5 (3) |
C4—C5—C6—C7 | 178.1 (4) | C4X—C5X—C6X—C7X | −173.1 (18) |
C1—C6—C7—C8 | −119.9 (4) | C1X—C6X—C7X—C8X | 152.4 (17) |
C5—C6—C7—C8 | 61.3 (5) | C5X—C6X—C7X—C8X | −29 (2) |
C1—C6—C7—Br2 | 124.3 (3) | C1X—C6X—C7X—Br1X | −98.1 (18) |
C5—C6—C7—Br2 | −54.5 (4) | C5X—C6X—C7X—Br1X | 80.3 (17) |
C6—C7—C8—C9 | 171.2 (3) | C6X—C7X—C8X—C9X | −171.9 (13) |
Br2—C7—C8—C9 | −68.2 (3) | Br1X—C7X—C8X—C9X | 73.4 (12) |
C6—C7—C8—Br1 | 56.9 (3) | C6X—C7X—C8X—Br2X | −63.9 (15) |
Br2—C7—C8—Br1 | 177.45 (15) | Br1X—C7X—C8X—Br2X | −178.6 (6) |
O1—C9—C8—C7 | −28.4 (5) | O1X—C9X—C8X—C7X | 51 (2) |
C10—C9—C8—C7 | 153.0 (3) | C10X—C9X—C8X—C7X | −134.3 (16) |
O1—C9—C8—Br1 | 88.9 (4) | O1X—C9X—C8X—Br2X | −55.5 (18) |
C10—C9—C8—Br1 | −89.8 (3) | C10X—C9X—C8X—Br2X | 118.8 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7BA···Cl1i | 1.00 | 2.82 | 3.441 (4) | 121 |
C11—H11B···O1ii | 0.95 | 2.49 | 3.435 (6) | 175 |
Symmetry codes: (i) x, −y+1, z−1/2; (ii) x, −y, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H8Br2ClNO3S |
Mr | 453.53 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 28.5425 (17), 9.5470 (5), 11.4047 (7) |
β (°) | 103.224 (2) |
V (Å3) | 3025.3 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 5.68 |
Crystal size (mm) | 0.31 × 0.24 × 0.11 |
Data collection | |
Diffractometer | Bruker SMART APEX DUO CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.269, 0.564 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 33329, 5031, 4272 |
Rint | 0.057 |
(sin θ/λ)max (Å−1) | 0.737 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.112, 1.11 |
No. of reflections | 5031 |
No. of parameters | 275 |
No. of restraints | 504 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.33, −0.75 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7BA···Cl1i | 1.00 | 2.82 | 3.441 (4) | 121 |
C11—H11B···O1ii | 0.95 | 2.49 | 3.435 (6) | 175 |
Symmetry codes: (i) x, −y+1, z−1/2; (ii) x, −y, z+1/2. |
Footnotes
‡Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
The authors thank Universiti Sains Malaysia (USM) for the Research University Grant (1001/PFIZIK/811160). SA also thanks the Malaysian Government and USM for the Academic Staff Training Scheme (ASTS) award.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Nitrothiophene and its derivatives possess a wide variety of pharmacological activity. The presence of a nitro group at the 4-position of the molecule conferred antibacterial activity (Holla et al., 1986). A large number of nitrothiophene derivatives are reported to exhibit a variety of biological activity such as antibacterial, antifungal etc. (Kalluraya et al., 1994; Kalluraya & Shetty, 1997). Dibromopropanones were obtained by the bromination of 1-aryl-3-(4-nitro-2-thienyl)-2-propen-1-ones. Acid-catalysed condensation of acetophenones with 4-nitrothiophenediacetate in acetic acid yielded the required 1-aryl-3-(4-nitro-2-thienyl)-2-propen-1-ones known as chalcones (Rai et al., 2008).
The molecular structure is shown in Fig. 1. Bond lengths and angles are within normal ranges and comparable to the related structures (Fun et al., 2010; Fun et al., 2011). The whole molecule of the title compound is disordered over two positions with a refined site-occupancies ratio of 0.805 (6): 0.195 (6). For the major disorder component, the thiophene ring (S1/C10–C13) is approximately planar with maximum deviation of 0.017 (4) Å at atom C10 and forms a dihedral angle of 32.1 (5)° with the chloro-substituted phenyl ring (C1–C6). Meanwhile, for the minor disorder component, the approximately planar thiophene ring [S1X/C10X–C13X, with maximum deviation of 0.033 (9) Å at atom S1X] makes a dihedral angle of 26.3 (18)° with the chloro-substituted phenyl ring (C1X–C6X).
In the crystal (Fig. 2), C7—H7BA···Cl1 and C11—H11A···O1 hydrogen bonds (Table 1) link the molecules into a two-dimensional network parallel to the bc-plane. π–π interaction of Cg1···Cg1 = 3.550 (7) Å (symmetry code: 1/2 - x, -1/2 - y,-z) consolidate the crystal structure [Cg1 is the centroid of the major component of the thiophene ring (S1/C10–C13)].