organic compounds
An orthorhombic polymorph of 2-(1,3-benzothiazol-2-yl)-6-ethoxyphenol
aDepartment of Chemistry, Payame Noor University, PO Box 19395-3697 Tehran, I. R. of IRAN, bDepartment of Chemistry, Science and Research Branch, Islamic Azad University, Tehran, Iran, cStructural Dynamics of (Bio)Chemical Systems, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Göttingen, Germany, dDepartment of Chemistry, Marvdasht Branch, Islamic Azad University, Marvdasht, Iran, eDepartment of Chemistry and Chemical Engineering, Mahshahr Branch, Islamic Azad University, Mahshahr, Iran, and fDepartment of Physics, University of Sargodha, Punjab, Pakistan
*Correspondence e-mail: zsrkk@yahoo.com, dmntahir_uos@yahoo.com
In the title molecule, C15H13NO2S, an intramolecular O—H⋯N hydrogen bond forms an S(6) ring motif. The benzothiazole ring system and the benzene ring form a dihedral angle of 8.9 (3) Å. In the crystal, molecules are linked by weak C—H⋯O hydrogen bonds, forming chains along the b axis. In addition, π–π interactions [centroid–centroid distances = 3.772 (4) and 3.879 (4) Å] are observed.
Related literature
For the monoclinic polymorph, see: Lakshmanan et al. (2011). For background to and examples of the structures of Schiff base ligands see: Kargar et al. (2011); Kia et al. (2010). For hydrogen-bond motifs, see: Bernstein et al. (1995). For standard bond lengths, see: Allen et al. (1987).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536812033879/lh5505sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812033879/lh5505Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812033879/lh5505Isup3.cml
The title compound was synthesized by adding 3-ethoxysalicylaldehyde (2 mmol) to a solution of 2-aminothiophenol (2mmol) in ethanol (30 ml). The mixture was refluxed with stirring for half an hour. The resultant solution was filtered. Light-yellow prismatic single crystals of the title compound suitable for X-ray
were recrystallized from ethanol by slow evaporation of the solvent at room temperature over several days.The O-bound H atom was located in a difference Fourier map and constrained to refine on the parent atom with Uiso(H) = 1.5Ueq(O). The other H-atoms were included in calculated positions and treated as riding atoms: C—H = 0.93, 0.97 and 0.96 Å for CH, CH2 and CH3 H-atoms, respectively, with Uiso (H) = k × Ueq(C), k = 1.2 for CH, CH2 and 1.5 for CH3.
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C15H13NO2S | F(000) = 568 |
Mr = 271.32 | Dx = 1.351 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 864 reflections |
a = 4.8728 (10) Å | θ = 2.5–28.8° |
b = 11.711 (3) Å | µ = 0.24 mm−1 |
c = 23.378 (6) Å | T = 296 K |
V = 1334.1 (6) Å3 | Prism, light-yellow |
Z = 4 | 0.33 × 0.23 × 0.21 mm |
Bruker SMART APEXII CCD diffractometer | 2239 independent reflections |
Radiation source: fine-focus sealed tube | 1207 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.073 |
ω scans | θmax = 25.0°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −3→5 |
Tmin = 0.925, Tmax = 0.952 | k = −9→13 |
4083 measured reflections | l = −27→19 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.068 | H-atom parameters constrained |
wR(F2) = 0.144 | w = 1/[σ2(Fo2) + (0.0413P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.99 | (Δ/σ)max < 0.001 |
2239 reflections | Δρmax = 0.19 e Å−3 |
173 parameters | Δρmin = −0.30 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 874 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.1 (2) |
C15H13NO2S | V = 1334.1 (6) Å3 |
Mr = 271.32 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 4.8728 (10) Å | µ = 0.24 mm−1 |
b = 11.711 (3) Å | T = 296 K |
c = 23.378 (6) Å | 0.33 × 0.23 × 0.21 mm |
Bruker SMART APEXII CCD diffractometer | 2239 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1207 reflections with I > 2σ(I) |
Tmin = 0.925, Tmax = 0.952 | Rint = 0.073 |
4083 measured reflections |
R[F2 > 2σ(F2)] = 0.068 | H-atom parameters constrained |
wR(F2) = 0.144 | Δρmax = 0.19 e Å−3 |
S = 0.99 | Δρmin = −0.30 e Å−3 |
2239 reflections | Absolute structure: Flack (1983), 874 Friedel pairs |
173 parameters | Absolute structure parameter: −0.1 (2) |
0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 1.2770 (11) | 0.2177 (4) | 0.2096 (3) | 0.0485 (16) | |
C2 | 1.4128 (13) | 0.1882 (5) | 0.1606 (3) | 0.0647 (19) | |
H2 | 1.3725 | 0.1196 | 0.1423 | 0.078* | |
C3 | 1.6064 (14) | 0.2590 (6) | 0.1386 (3) | 0.073 (2) | |
H3 | 1.6970 | 0.2397 | 0.1049 | 0.087* | |
C4 | 1.6692 (13) | 0.3614 (6) | 0.1667 (3) | 0.0670 (18) | |
H4 | 1.8030 | 0.4093 | 0.1516 | 0.080* | |
C5 | 1.5378 (14) | 0.3923 (5) | 0.2160 (3) | 0.0599 (17) | |
H5 | 1.5816 | 0.4606 | 0.2342 | 0.072* | |
C6 | 1.3392 (11) | 0.3211 (5) | 0.2386 (3) | 0.0458 (15) | |
N1 | 1.1883 (9) | 0.3431 (4) | 0.2872 (2) | 0.0468 (12) | |
C8 | 0.8322 (12) | 0.2602 (5) | 0.3462 (3) | 0.0509 (16) | |
C9 | 0.8043 (12) | 0.3576 (5) | 0.3797 (3) | 0.0530 (16) | |
C10 | 0.6091 (12) | 0.3608 (6) | 0.4232 (3) | 0.0603 (17) | |
C11 | 0.4481 (14) | 0.2664 (6) | 0.4350 (3) | 0.0664 (19) | |
H11 | 0.3218 | 0.2685 | 0.4648 | 0.080* | |
C12 | 0.4756 (15) | 0.1698 (6) | 0.4026 (3) | 0.0686 (18) | |
H12 | 0.3661 | 0.1067 | 0.4105 | 0.082* | |
C13 | 0.6598 (12) | 0.1642 (5) | 0.3590 (3) | 0.0568 (16) | |
H13 | 0.6740 | 0.0979 | 0.3373 | 0.068* | |
C14 | 0.3939 (15) | 0.4754 (6) | 0.4949 (3) | 0.084 (2) | |
H14A | 0.4162 | 0.4185 | 0.5246 | 0.101* | |
H14B | 0.2133 | 0.4663 | 0.4780 | 0.101* | |
C15 | 0.4237 (18) | 0.5927 (7) | 0.5194 (3) | 0.118 (3) | |
H15A | 0.6144 | 0.6088 | 0.5257 | 0.176* | |
H15B | 0.3265 | 0.5970 | 0.5551 | 0.176* | |
H15C | 0.3492 | 0.6476 | 0.4932 | 0.176* | |
C7 | 1.0189 (12) | 0.2585 (4) | 0.2991 (2) | 0.0472 (15) | |
O1 | 0.9557 (8) | 0.4529 (3) | 0.37058 (16) | 0.0633 (12) | |
H1 | 1.0595 | 0.4317 | 0.3417 | 0.095* | |
O2 | 0.5994 (9) | 0.4617 (4) | 0.45248 (18) | 0.0741 (13) | |
S1 | 1.0285 (3) | 0.14638 (12) | 0.24914 (8) | 0.0574 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.039 (4) | 0.049 (4) | 0.057 (4) | 0.007 (3) | −0.008 (3) | 0.004 (3) |
C2 | 0.064 (5) | 0.063 (4) | 0.067 (5) | 0.008 (4) | −0.006 (4) | −0.003 (4) |
C3 | 0.065 (5) | 0.088 (6) | 0.064 (5) | 0.004 (4) | 0.007 (4) | 0.009 (5) |
C4 | 0.064 (4) | 0.063 (5) | 0.074 (5) | −0.013 (4) | −0.008 (4) | 0.019 (4) |
C5 | 0.066 (5) | 0.048 (4) | 0.066 (4) | −0.001 (4) | −0.012 (4) | 0.003 (4) |
C6 | 0.038 (3) | 0.036 (3) | 0.063 (5) | 0.005 (3) | −0.005 (3) | 0.009 (3) |
N1 | 0.040 (3) | 0.036 (3) | 0.064 (3) | −0.001 (3) | −0.010 (3) | 0.001 (3) |
C8 | 0.043 (4) | 0.045 (4) | 0.065 (4) | 0.001 (3) | −0.010 (3) | 0.008 (4) |
C9 | 0.043 (4) | 0.049 (4) | 0.067 (5) | 0.005 (3) | −0.006 (3) | 0.018 (4) |
C10 | 0.055 (4) | 0.066 (4) | 0.060 (4) | 0.005 (4) | −0.006 (3) | −0.001 (4) |
C11 | 0.055 (5) | 0.076 (5) | 0.068 (5) | −0.005 (4) | 0.002 (4) | 0.010 (4) |
C12 | 0.063 (4) | 0.065 (5) | 0.078 (5) | −0.011 (4) | −0.004 (4) | 0.019 (4) |
C13 | 0.057 (4) | 0.041 (4) | 0.072 (5) | −0.006 (4) | −0.008 (4) | 0.008 (4) |
C14 | 0.083 (6) | 0.105 (6) | 0.063 (5) | 0.004 (5) | 0.014 (4) | −0.007 (5) |
C15 | 0.142 (8) | 0.116 (7) | 0.095 (6) | 0.016 (6) | 0.027 (6) | −0.035 (5) |
C7 | 0.046 (4) | 0.038 (3) | 0.057 (4) | 0.008 (3) | −0.015 (3) | 0.000 (3) |
O1 | 0.066 (3) | 0.045 (2) | 0.078 (3) | 0.000 (2) | 0.011 (2) | −0.004 (2) |
O2 | 0.073 (3) | 0.077 (3) | 0.072 (3) | −0.004 (3) | 0.015 (3) | −0.007 (3) |
S1 | 0.0528 (9) | 0.0410 (7) | 0.0784 (11) | −0.0014 (8) | −0.0047 (10) | −0.0030 (10) |
C1—C2 | 1.368 (8) | C9—C10 | 1.393 (7) |
C1—C6 | 1.421 (7) | C10—O2 | 1.366 (7) |
C1—S1 | 1.737 (6) | C10—C11 | 1.384 (8) |
C2—C3 | 1.358 (8) | C11—C12 | 1.368 (8) |
C2—H2 | 0.9300 | C11—H11 | 0.9300 |
C3—C4 | 1.402 (8) | C12—C13 | 1.360 (8) |
C3—H3 | 0.9300 | C12—H12 | 0.9300 |
C4—C5 | 1.368 (8) | C13—H13 | 0.9300 |
C4—H4 | 0.9300 | C14—O2 | 1.418 (7) |
C5—C6 | 1.382 (7) | C14—C15 | 1.496 (9) |
C5—H5 | 0.9300 | C14—H14A | 0.9700 |
C6—N1 | 1.377 (7) | C14—H14B | 0.9700 |
N1—C7 | 1.318 (6) | C15—H15A | 0.9600 |
C8—C9 | 1.391 (8) | C15—H15B | 0.9600 |
C8—C7 | 1.428 (7) | C15—H15C | 0.9600 |
C8—C13 | 1.435 (8) | C7—S1 | 1.758 (5) |
C9—O1 | 1.355 (6) | O1—H1 | 0.8797 |
C2—C1—C6 | 120.8 (6) | C12—C11—C10 | 119.7 (6) |
C2—C1—S1 | 131.4 (5) | C12—C11—H11 | 120.2 |
C6—C1—S1 | 107.7 (4) | C10—C11—H11 | 120.2 |
C3—C2—C1 | 120.0 (6) | C13—C12—C11 | 121.3 (6) |
C3—C2—H2 | 120.0 | C13—C12—H12 | 119.3 |
C1—C2—H2 | 120.0 | C11—C12—H12 | 119.3 |
C2—C3—C4 | 119.7 (6) | C12—C13—C8 | 120.3 (6) |
C2—C3—H3 | 120.1 | C12—C13—H13 | 119.8 |
C4—C3—H3 | 120.1 | C8—C13—H13 | 119.8 |
C5—C4—C3 | 121.4 (6) | O2—C14—C15 | 107.7 (6) |
C5—C4—H4 | 119.3 | O2—C14—H14A | 110.2 |
C3—C4—H4 | 119.3 | C15—C14—H14A | 110.2 |
C4—C5—C6 | 119.4 (6) | O2—C14—H14B | 110.2 |
C4—C5—H5 | 120.3 | C15—C14—H14B | 110.2 |
C6—C5—H5 | 120.3 | H14A—C14—H14B | 108.5 |
N1—C6—C5 | 125.2 (6) | C14—C15—H15A | 109.5 |
N1—C6—C1 | 116.0 (5) | C14—C15—H15B | 109.5 |
C5—C6—C1 | 118.7 (5) | H15A—C15—H15B | 109.5 |
C7—N1—C6 | 111.6 (5) | C14—C15—H15C | 109.5 |
C9—C8—C7 | 120.5 (5) | H15A—C15—H15C | 109.5 |
C9—C8—C13 | 117.9 (6) | H15B—C15—H15C | 109.5 |
C7—C8—C13 | 121.5 (6) | N1—C7—C8 | 123.4 (5) |
O1—C9—C8 | 122.2 (5) | N1—C7—S1 | 113.9 (4) |
O1—C9—C10 | 117.7 (6) | C8—C7—S1 | 122.6 (5) |
C8—C9—C10 | 120.0 (6) | C9—O1—H1 | 101.7 |
O2—C10—C11 | 124.9 (6) | C10—O2—C14 | 118.2 (5) |
O2—C10—C9 | 114.3 (6) | C1—S1—C7 | 90.7 (3) |
C11—C10—C9 | 120.7 (6) | ||
C6—C1—C2—C3 | −1.2 (8) | C8—C9—C10—C11 | 2.3 (9) |
S1—C1—C2—C3 | −178.3 (5) | O2—C10—C11—C12 | 179.8 (6) |
C1—C2—C3—C4 | 1.0 (9) | C9—C10—C11—C12 | −1.8 (9) |
C2—C3—C4—C5 | −0.5 (10) | C10—C11—C12—C13 | 0.4 (10) |
C3—C4—C5—C6 | 0.1 (9) | C11—C12—C13—C8 | 0.5 (10) |
C4—C5—C6—N1 | −178.7 (5) | C9—C8—C13—C12 | 0.1 (9) |
C4—C5—C6—C1 | −0.3 (8) | C7—C8—C13—C12 | −177.2 (6) |
C2—C1—C6—N1 | 179.4 (5) | C6—N1—C7—C8 | −178.1 (5) |
S1—C1—C6—N1 | −2.9 (6) | C6—N1—C7—S1 | −1.6 (6) |
C2—C1—C6—C5 | 0.8 (8) | C9—C8—C7—N1 | 5.5 (8) |
S1—C1—C6—C5 | 178.6 (4) | C13—C8—C7—N1 | −177.3 (5) |
C5—C6—N1—C7 | −178.6 (5) | C9—C8—C7—S1 | −170.7 (4) |
C1—C6—N1—C7 | 3.0 (6) | C13—C8—C7—S1 | 6.6 (8) |
C7—C8—C9—O1 | −1.9 (8) | C11—C10—O2—C14 | −5.8 (9) |
C13—C8—C9—O1 | −179.3 (5) | C9—C10—O2—C14 | 175.7 (5) |
C7—C8—C9—C10 | 175.9 (5) | C15—C14—O2—C10 | −178.9 (6) |
C13—C8—C9—C10 | −1.5 (8) | C2—C1—S1—C7 | 179.0 (6) |
O1—C9—C10—O2 | −1.2 (8) | C6—C1—S1—C7 | 1.5 (4) |
C8—C9—C10—O2 | −179.1 (5) | N1—C7—S1—C1 | 0.0 (4) |
O1—C9—C10—C11 | −179.8 (5) | C8—C7—S1—C1 | 176.5 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.88 | 1.76 | 2.592 (6) | 158 |
C2—H2···O1i | 0.93 | 2.55 | 3.372 (8) | 148 |
Symmetry code: (i) −x+2, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C15H13NO2S |
Mr | 271.32 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 296 |
a, b, c (Å) | 4.8728 (10), 11.711 (3), 23.378 (6) |
V (Å3) | 1334.1 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.24 |
Crystal size (mm) | 0.33 × 0.23 × 0.21 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.925, 0.952 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4083, 2239, 1207 |
Rint | 0.073 |
(sin θ/λ)max (Å−1) | 0.594 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.068, 0.144, 0.99 |
No. of reflections | 2239 |
No. of parameters | 173 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.19, −0.30 |
Absolute structure | Flack (1983), 874 Friedel pairs |
Absolute structure parameter | −0.1 (2) |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.88 | 1.76 | 2.592 (6) | 158 |
C2—H2···O1i | 0.93 | 2.55 | 3.372 (8) | 148 |
Symmetry code: (i) −x+2, y−1/2, −z+1/2. |
Acknowledgements
HK thanks PNU for financial support. MNT thanks GC University of Sargodha, Pakistan, for the research facility.
References
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In continuation of our work on the crystal structures of Schiff base ligands from different substituted salicylaldehyde and amines (Kargar et al., 2011; Kia et al., 2010), we have determined the X-ray structure of the title compound. The crystal structure of a monoclinic polymorph of the title compound has already been published (Lakshmanan et al., 2011).
The molecular structure of the title compound is shown in Fig. 1. The bond lengths (Allen et al., 1987) and angles are within the normal ranges. An intramolecular O—H···N hydrogen bond forms a S(6) ring motif (Bernstein et al., 1995). In the crystal, molecules are linked by weak intermolecular C—H···O hydrogen bonds forming one-dimensional chains along the b axis (Table 2, Fig. 2). In addition, weak intermolecular π–π interactions are observed [Cg1···Cg2ii = 3.772 (4) Å, (ii) -1 + x, y, z; Cg1···Cg3iii = 3.879 (4), (iii) 1 + x, y, z, Cg1, Cg2 and Cg3 are centroid of S1/C1/C6/N1/C7, C1–C6, and C8–C13 rings].