organic compounds
1-[(Pyridin-3-yl)(pyrrolidin-1-yl)methyl]naphthalen-2-ol
aOrdered Matter Science Research Center, College of Chemistry and Chemical, Engineering, Southeast University, Nanjing 211189, People's Republic of China
*Correspondence e-mail: zhouqinqin623@sina.com
The title compound, C20H20N2O, was synthesized by a solvent-free one-pot three-component domino reaction of naphthalen-2-ol, nicotinaldehyde and pyrrolidine. The dihedral angle between the naphthalene ring system and the pyridine ring is 74.22 (6)°. The pyrrolidine ring assumes an with the N atom as the flap. An intramolecular O—H⋯N hydrogen bond stabilizes the molecular conformation.
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku,2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg & Putz, 2005); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536812033363/mw2063sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812033363/mw2063Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812033363/mw2063Isup3.cml
A dry 50 mL flask was charged with nicotinaldehyde (10 mmol), naphthalen-2-ol (10 mmol) and pyrrolidine (10 mmol). The mixture was stirred at 100°C for 5 h and then ethanol (15 mL) was added. After refluxing for 30 minutes, the solution was filtered and crystals of the title compound suitable for X-ray analysis were obtained by slow evaporation.
All H atoms were calculated geometrically and refined using a riding model with C—H = 0.93–0.98 Å, O—H = 0.82 Å and with Uiso(H) = 1.2 Ueq(C)for carbon-bound or 1.5 Ueq (O) for oxygen-bound H atoms.
Data collection: CrystalClear (Rigaku,2005); cell
CrystalClear (Rigaku,2005); data reduction: CrystalClear (Rigaku,2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg & Putz, 2005); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The structure of the title compound with displacement ellipsoids drawn at the 30% probability level. The intramolecular hydrogen bond is shown as a dashed line. |
C20H20N2O | F(000) = 648 |
Mr = 304.38 | Dx = 1.243 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C -2yc | Cell parameters from 3664 reflections |
a = 9.966 (2) Å | θ = 3.1–27.5° |
b = 15.587 (3) Å | µ = 0.08 mm−1 |
c = 10.477 (2) Å | T = 293 K |
β = 91.60 (3)° | Block, colourless |
V = 1626.9 (6) Å3 | 0.38 × 0.32 × 0.27 mm |
Z = 4 |
Rigaku SCXmini CCD diffractometer | 1857 independent reflections |
Radiation source: fine-focus sealed tube | 1361 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.067 |
ω scans | θmax = 27.5°, θmin = 3.1° |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | h = −12→12 |
Tmin = 0.967, Tmax = 0.982 | k = −20→20 |
8194 measured reflections | l = −13→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.122 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0577P)2] where P = (Fo2 + 2Fc2)/3 |
1857 reflections | (Δ/σ)max < 0.001 |
209 parameters | Δρmax = 0.13 e Å−3 |
2 restraints | Δρmin = −0.13 e Å−3 |
C20H20N2O | V = 1626.9 (6) Å3 |
Mr = 304.38 | Z = 4 |
Monoclinic, Cc | Mo Kα radiation |
a = 9.966 (2) Å | µ = 0.08 mm−1 |
b = 15.587 (3) Å | T = 293 K |
c = 10.477 (2) Å | 0.38 × 0.32 × 0.27 mm |
β = 91.60 (3)° |
Rigaku SCXmini CCD diffractometer | 1857 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 1361 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.982 | Rint = 0.067 |
8194 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 2 restraints |
wR(F2) = 0.122 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.13 e Å−3 |
1857 reflections | Δρmin = −0.13 e Å−3 |
209 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | −0.0405 (4) | 0.2124 (2) | 0.2764 (4) | 0.0609 (9) | |
H1A | −0.1100 | 0.1705 | 0.2925 | 0.073* | |
H1B | −0.0724 | 0.2515 | 0.2102 | 0.073* | |
C2 | −0.0017 (5) | 0.2605 (3) | 0.3966 (4) | 0.0862 (13) | |
H2A | −0.0749 | 0.2599 | 0.4557 | 0.103* | |
H2B | 0.0199 | 0.3196 | 0.3770 | 0.103* | |
C3 | 0.1203 (4) | 0.2148 (3) | 0.4541 (3) | 0.0728 (11) | |
H3A | 0.1014 | 0.1924 | 0.5381 | 0.087* | |
H3B | 0.1964 | 0.2534 | 0.4614 | 0.087* | |
C4 | 0.1484 (4) | 0.1422 (2) | 0.3617 (3) | 0.0560 (8) | |
H4A | 0.2443 | 0.1341 | 0.3534 | 0.067* | |
H4B | 0.1091 | 0.0890 | 0.3907 | 0.067* | |
C5 | 0.0588 (3) | 0.09834 (19) | 0.1473 (3) | 0.0452 (7) | |
H5 | −0.0119 | 0.0622 | 0.1820 | 0.054* | |
C6 | 0.1826 (3) | 0.04266 (18) | 0.1305 (3) | 0.0447 (7) | |
C7 | 0.1969 (3) | −0.0334 (2) | 0.1964 (3) | 0.0575 (8) | |
H7 | 0.1296 | −0.0480 | 0.2522 | 0.069* | |
C8 | 0.3946 (4) | −0.0638 (2) | 0.1086 (4) | 0.0711 (10) | |
H8 | 0.4690 | −0.0994 | 0.1020 | 0.085* | |
C9 | 0.3914 (4) | 0.0095 (2) | 0.0368 (4) | 0.0701 (10) | |
H9 | 0.4606 | 0.0225 | −0.0178 | 0.084* | |
C10 | 0.2826 (3) | 0.0636 (2) | 0.0475 (4) | 0.0587 (9) | |
H10 | 0.2768 | 0.1137 | −0.0007 | 0.070* | |
C11 | 0.0069 (3) | 0.13455 (19) | 0.0201 (3) | 0.0457 (7) | |
C12 | 0.0554 (3) | 0.2112 (2) | −0.0248 (3) | 0.0521 (8) | |
C13 | 0.0112 (3) | 0.2441 (2) | −0.1444 (3) | 0.0596 (9) | |
H13 | 0.0478 | 0.2949 | −0.1744 | 0.072* | |
C14 | −0.0833 (4) | 0.2028 (2) | −0.2156 (3) | 0.0626 (10) | |
H14 | −0.1114 | 0.2256 | −0.2939 | 0.075* | |
C15 | −0.1403 (3) | 0.1251 (2) | −0.1726 (3) | 0.0528 (8) | |
C16 | −0.2440 (4) | 0.0822 (3) | −0.2422 (3) | 0.0635 (10) | |
H16 | −0.2781 | 0.1066 | −0.3174 | 0.076* | |
C17 | −0.2945 (4) | 0.0070 (3) | −0.2023 (4) | 0.0688 (10) | |
H17 | −0.3624 | −0.0202 | −0.2498 | 0.083* | |
C18 | −0.2443 (3) | −0.0301 (2) | −0.0888 (3) | 0.0614 (9) | |
H18 | −0.2789 | −0.0822 | −0.0614 | 0.074* | |
C19 | −0.1451 (3) | 0.0095 (2) | −0.0180 (3) | 0.0526 (8) | |
H19 | −0.1118 | −0.0168 | 0.0560 | 0.063* | |
C20 | −0.0921 (3) | 0.08934 (19) | −0.0545 (3) | 0.0465 (7) | |
N1 | 0.0857 (3) | 0.16953 (15) | 0.2391 (2) | 0.0476 (6) | |
N2 | 0.2995 (3) | −0.08781 (18) | 0.1867 (3) | 0.0720 (9) | |
O1 | 0.1471 (2) | 0.25894 (14) | 0.0428 (2) | 0.0616 (6) | |
H1 | 0.1554 | 0.2398 | 0.1155 | 0.092* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.061 (2) | 0.0530 (18) | 0.070 (2) | 0.0123 (16) | 0.0124 (17) | 0.0068 (17) |
C2 | 0.105 (4) | 0.079 (3) | 0.076 (3) | 0.026 (3) | 0.019 (3) | −0.005 (2) |
C3 | 0.091 (3) | 0.072 (2) | 0.055 (2) | 0.002 (2) | 0.007 (2) | −0.0058 (18) |
C4 | 0.065 (2) | 0.0566 (19) | 0.0461 (17) | 0.0057 (16) | −0.0002 (15) | 0.0067 (15) |
C5 | 0.0402 (15) | 0.0456 (18) | 0.0496 (16) | −0.0014 (13) | −0.0030 (13) | 0.0079 (13) |
C6 | 0.0420 (16) | 0.0414 (15) | 0.0502 (16) | −0.0009 (13) | −0.0074 (13) | 0.0022 (13) |
C7 | 0.055 (2) | 0.0502 (18) | 0.067 (2) | 0.0037 (15) | −0.0013 (16) | 0.0044 (16) |
C8 | 0.057 (2) | 0.062 (2) | 0.094 (3) | 0.0183 (18) | −0.012 (2) | −0.006 (2) |
C9 | 0.051 (2) | 0.073 (2) | 0.087 (3) | 0.0090 (17) | 0.0106 (19) | −0.001 (2) |
C10 | 0.0516 (19) | 0.0483 (18) | 0.076 (2) | 0.0023 (15) | 0.0050 (18) | 0.0067 (17) |
C11 | 0.0413 (16) | 0.0467 (18) | 0.0490 (17) | 0.0039 (13) | −0.0009 (14) | 0.0079 (13) |
C12 | 0.0474 (18) | 0.0503 (19) | 0.059 (2) | 0.0009 (14) | 0.0017 (16) | 0.0061 (15) |
C13 | 0.065 (2) | 0.056 (2) | 0.058 (2) | 0.0037 (17) | 0.0039 (18) | 0.0202 (16) |
C14 | 0.068 (2) | 0.070 (2) | 0.0501 (19) | 0.0148 (18) | −0.0006 (18) | 0.0165 (17) |
C15 | 0.0473 (17) | 0.0655 (19) | 0.0453 (17) | 0.0141 (16) | −0.0021 (14) | 0.0004 (15) |
C16 | 0.061 (2) | 0.078 (3) | 0.0500 (19) | 0.0149 (19) | −0.0091 (18) | −0.0046 (18) |
C17 | 0.062 (2) | 0.080 (3) | 0.063 (2) | 0.001 (2) | −0.0129 (18) | −0.016 (2) |
C18 | 0.054 (2) | 0.068 (2) | 0.062 (2) | −0.0062 (16) | −0.0013 (18) | −0.0053 (18) |
C19 | 0.0503 (18) | 0.0544 (18) | 0.0529 (18) | 0.0018 (14) | −0.0016 (15) | 0.0019 (15) |
C20 | 0.0382 (15) | 0.0534 (17) | 0.0479 (16) | 0.0102 (13) | 0.0027 (13) | 0.0026 (13) |
N1 | 0.0490 (14) | 0.0443 (13) | 0.0497 (14) | 0.0044 (11) | 0.0034 (12) | 0.0036 (11) |
N2 | 0.067 (2) | 0.0563 (19) | 0.092 (2) | 0.0165 (16) | −0.0065 (19) | 0.0065 (17) |
O1 | 0.0666 (15) | 0.0538 (13) | 0.0643 (14) | −0.0110 (12) | −0.0020 (13) | 0.0119 (11) |
C1—N1 | 1.486 (4) | C8—H8 | 0.9300 |
C1—C2 | 1.506 (6) | C9—C10 | 1.381 (5) |
C1—H1A | 0.9700 | C9—H9 | 0.9300 |
C1—H1B | 0.9700 | C10—H10 | 0.9300 |
C2—C3 | 1.520 (6) | C11—C12 | 1.376 (4) |
C2—H2A | 0.9700 | C11—C20 | 1.427 (4) |
C2—H2B | 0.9700 | C12—O1 | 1.362 (4) |
C3—C4 | 1.520 (5) | C12—C13 | 1.413 (4) |
C3—H3A | 0.9700 | C13—C14 | 1.349 (5) |
C3—H3B | 0.9700 | C13—H13 | 0.9300 |
C4—N1 | 1.476 (4) | C14—C15 | 1.416 (5) |
C4—H4A | 0.9700 | C14—H14 | 0.9300 |
C4—H4B | 0.9700 | C15—C16 | 1.416 (5) |
C5—N1 | 1.488 (4) | C15—C20 | 1.428 (4) |
C5—C6 | 1.523 (4) | C16—C17 | 1.347 (5) |
C5—C11 | 1.524 (4) | C16—H16 | 0.9300 |
C5—H5 | 0.9800 | C17—C18 | 1.402 (5) |
C6—C7 | 1.377 (4) | C17—H17 | 0.9300 |
C6—C10 | 1.380 (4) | C18—C19 | 1.367 (5) |
C7—N2 | 1.334 (4) | C18—H18 | 0.9300 |
C7—H7 | 0.9300 | C19—C20 | 1.409 (4) |
C8—N2 | 1.324 (5) | C19—H19 | 0.9300 |
C8—C9 | 1.368 (6) | O1—H1 | 0.8200 |
N1—C1—C2 | 104.2 (3) | C8—C9—H9 | 120.9 |
N1—C1—H1A | 110.9 | C10—C9—H9 | 120.9 |
C2—C1—H1A | 110.9 | C6—C10—C9 | 119.3 (3) |
N1—C1—H1B | 110.9 | C6—C10—H10 | 120.4 |
C2—C1—H1B | 110.9 | C9—C10—H10 | 120.4 |
H1A—C1—H1B | 108.9 | C12—C11—C20 | 119.0 (3) |
C1—C2—C3 | 106.4 (3) | C12—C11—C5 | 120.4 (3) |
C1—C2—H2A | 110.5 | C20—C11—C5 | 120.6 (2) |
C3—C2—H2A | 110.5 | O1—C12—C11 | 122.2 (3) |
C1—C2—H2B | 110.5 | O1—C12—C13 | 116.8 (3) |
C3—C2—H2B | 110.5 | C11—C12—C13 | 121.0 (3) |
H2A—C2—H2B | 108.6 | C14—C13—C12 | 120.8 (3) |
C2—C3—C4 | 104.8 (3) | C14—C13—H13 | 119.6 |
C2—C3—H3A | 110.8 | C12—C13—H13 | 119.6 |
C4—C3—H3A | 110.8 | C13—C14—C15 | 120.8 (3) |
C2—C3—H3B | 110.8 | C13—C14—H14 | 119.6 |
C4—C3—H3B | 110.8 | C15—C14—H14 | 119.6 |
H3A—C3—H3B | 108.9 | C16—C15—C14 | 122.3 (3) |
N1—C4—C3 | 105.0 (3) | C16—C15—C20 | 119.0 (3) |
N1—C4—H4A | 110.7 | C14—C15—C20 | 118.8 (3) |
C3—C4—H4A | 110.7 | C17—C16—C15 | 121.7 (3) |
N1—C4—H4B | 110.7 | C17—C16—H16 | 119.1 |
C3—C4—H4B | 110.7 | C15—C16—H16 | 119.2 |
H4A—C4—H4B | 108.8 | C16—C17—C18 | 119.6 (3) |
N1—C5—C6 | 111.6 (2) | C16—C17—H17 | 120.2 |
N1—C5—C11 | 109.8 (2) | C18—C17—H17 | 120.2 |
C6—C5—C11 | 111.5 (2) | C19—C18—C17 | 120.6 (4) |
N1—C5—H5 | 107.9 | C19—C18—H18 | 119.7 |
C6—C5—H5 | 107.9 | C17—C18—H18 | 119.7 |
C11—C5—H5 | 107.9 | C18—C19—C20 | 121.5 (3) |
C7—C6—C10 | 116.9 (3) | C18—C19—H19 | 119.2 |
C7—C6—C5 | 120.4 (3) | C20—C19—H19 | 119.2 |
C10—C6—C5 | 122.6 (3) | C19—C20—C11 | 123.1 (3) |
N2—C7—C6 | 125.3 (3) | C19—C20—C15 | 117.4 (3) |
N2—C7—H7 | 117.3 | C11—C20—C15 | 119.5 (3) |
C6—C7—H7 | 117.3 | C4—N1—C1 | 104.0 (2) |
N2—C8—C9 | 124.8 (3) | C4—N1—C5 | 114.3 (2) |
N2—C8—H8 | 117.6 | C1—N1—C5 | 111.5 (3) |
C9—C8—H8 | 117.6 | C8—N2—C7 | 115.5 (3) |
C8—C9—C10 | 118.1 (4) | C12—O1—H1 | 109.5 |
Experimental details
Crystal data | |
Chemical formula | C20H20N2O |
Mr | 304.38 |
Crystal system, space group | Monoclinic, Cc |
Temperature (K) | 293 |
a, b, c (Å) | 9.966 (2), 15.587 (3), 10.477 (2) |
β (°) | 91.60 (3) |
V (Å3) | 1626.9 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.38 × 0.32 × 0.27 |
Data collection | |
Diffractometer | Rigaku SCXmini CCD diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.967, 0.982 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8194, 1857, 1361 |
Rint | 0.067 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.122, 1.02 |
No. of reflections | 1857 |
No. of parameters | 209 |
No. of restraints | 2 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.13, −0.13 |
Computer programs: CrystalClear (Rigaku,2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg & Putz, 2005).
Acknowledgements
This work was supported by Southeast University
References
Brandenburg, K. & Putz, H. (2005). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Rigaku (2005). CrystalClear. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Wang, W. (2012). Acta Cryst. E68, o884. CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The so-called Betti base derivatives, which can be synthesized by many routes (Wang, 2012), have been of great interest in coordination chemistry. Herein the crystal structure of one such compound, obtained by a solvent-free, one-pot, three-component, domino reaction of naphthalen-2-ol, nicotinaldehyde and pyrrolidine is reported.
In the title compound the bond lengths and angles are well within the expected ranges. The dihedral angle between the naphthalene ring system and the pyridine ring is 74.22 (6)°. The pyrrolidine ring adopts an envelope conformation. An intramolecular O—H···N hydrogen bond (Table 1) stabilizes the molecular conformation.