organic compounds
5-Chloro-2-phenyl-1,3-benzothiazole
aH. E. J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi 75270, Pakistan
*Correspondence e-mail: dr.sammer.yousuf@gmail.com
In the structure of the title compound, C13H8ClNS, the dihedral angle between the benzothiazole ring system and the phenyl ring is 7.11 (8)°. In the crystal, molecules are arranged parallel to the c axis.
Related literature
For biological activites of benzothiazole compounds, see: Venkatesh & Pandeya (2009); Sreenivasa et al. (2009); Kok et al. (2008); Siddiqui et al. (2007); Maharan et al. (2007); Pattan et al. (2005); Hout et al. (2004); Chohan et al. (2003); Bénéteau et al. (1999). For the of benzothiazole derivatives, see: Lakshmanan et al. (2011); Zhang et al. (2008).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2000); cell SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536812036057/wn2488sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812036057/wn2488Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536812036057/wn2488Isup3.cml
In a 50 ml round-bottomed flask 2-amino-4-chlorobenzenethiol (0.159 g, 1 mmol), benzaldehyde (0.106 g, 1 mmol), N,N-dimethylformamide (10 ml), and sodium metabisulfite (0.2 g) were added with continuous stirring and allowed to reflux for 2 h. Progress of the reaction was monitored by TLC. After completion of the reaction, the mixture was allowed to cool at room temperature and addition of cold water produced a solid precipitate. Crystallization from ethanol afforded pure crystals of the title compound (0.245 g, 91.8% yield); these were found to be suitable for single-crystal X-ray diffraction studies.
H atoms were positioned geometrically and constrained to ride on their parent atoms, with Csp2—H = 0.93 Å and Uiso(H)= 1.2Ueq(C).
Data collection: SMART (Bruker, 2000); cell
SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008), PARST (Nardelli, 1995) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level. Hydrogen atoms are shown as spheres of arbitrary radius. Fig. 2. The crystal packing of the title compound. |
C13H8ClNS | F(000) = 504 |
Mr = 245.71 | Dx = 1.484 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 7.4057 (9) Å | Cell parameters from 2167 reflections |
b = 5.9100 (7) Å | θ = 3.1–28.2° |
c = 25.165 (3) Å | µ = 0.50 mm−1 |
β = 93.402 (3)° | T = 273 K |
V = 1099.5 (2) Å3 | Plate, colorless |
Z = 4 | 0.36 × 0.13 × 0.09 mm |
Bruker SMART APEX CCD area-detector diffractometer | 2013 independent reflections |
Radiation source: fine-focus sealed tube | 1706 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
ω scan | θmax = 25.5°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −8→8 |
Tmin = 0.840, Tmax = 0.956 | k = −7→6 |
6221 measured reflections | l = −30→30 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.093 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0522P)2 + 0.1614P] where P = (Fo2 + 2Fc2)/3 |
2013 reflections | (Δ/σ)max < 0.001 |
145 parameters | Δρmax = 0.24 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
C13H8ClNS | V = 1099.5 (2) Å3 |
Mr = 245.71 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.4057 (9) Å | µ = 0.50 mm−1 |
b = 5.9100 (7) Å | T = 273 K |
c = 25.165 (3) Å | 0.36 × 0.13 × 0.09 mm |
β = 93.402 (3)° |
Bruker SMART APEX CCD area-detector diffractometer | 2013 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 1706 reflections with I > 2σ(I) |
Tmin = 0.840, Tmax = 0.956 | Rint = 0.023 |
6221 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.093 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.24 e Å−3 |
2013 reflections | Δρmin = −0.21 e Å−3 |
145 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.26215 (9) | −0.18042 (11) | 0.02881 (2) | 0.0660 (2) | |
S1 | 0.33963 (7) | 0.39652 (8) | 0.234075 (19) | 0.04489 (18) | |
N1 | 0.19011 (19) | −0.0014 (3) | 0.22680 (5) | 0.0367 (4) | |
C1 | 0.2624 (3) | 0.3164 (3) | 0.35279 (8) | 0.0449 (5) | |
H1B | 0.3131 | 0.4479 | 0.3399 | 0.054* | |
C2 | 0.2426 (3) | 0.2922 (4) | 0.40663 (8) | 0.0519 (5) | |
H2A | 0.2800 | 0.4079 | 0.4298 | 0.062* | |
C3 | 0.1683 (3) | 0.0995 (4) | 0.42641 (8) | 0.0514 (5) | |
H3A | 0.1555 | 0.0846 | 0.4628 | 0.062* | |
C4 | 0.1123 (3) | −0.0732 (4) | 0.39196 (8) | 0.0484 (5) | |
H4A | 0.0617 | −0.2040 | 0.4052 | 0.058* | |
C5 | 0.1315 (2) | −0.0515 (3) | 0.33809 (7) | 0.0419 (4) | |
H5A | 0.0941 | −0.1681 | 0.3152 | 0.050* | |
C6 | 0.2067 (2) | 0.1442 (3) | 0.31764 (7) | 0.0361 (4) | |
C7 | 0.2333 (2) | 0.1595 (3) | 0.26047 (7) | 0.0349 (4) | |
C9 | 0.2440 (2) | 0.0541 (3) | 0.17678 (7) | 0.0353 (4) | |
C10 | 0.2208 (2) | −0.0858 (3) | 0.13211 (7) | 0.0395 (4) | |
H10A | 0.1639 | −0.2256 | 0.1340 | 0.047* | |
C11 | 0.2850 (3) | −0.0087 (3) | 0.08523 (7) | 0.0435 (5) | |
C12 | 0.3695 (3) | 0.2000 (4) | 0.08090 (8) | 0.0477 (5) | |
H12A | 0.4101 | 0.2459 | 0.0483 | 0.057* | |
C13 | 0.3932 (3) | 0.3391 (3) | 0.12465 (8) | 0.0457 (5) | |
H13A | 0.4498 | 0.4789 | 0.1222 | 0.055* | |
C14 | 0.3300 (2) | 0.2643 (3) | 0.17274 (7) | 0.0383 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0921 (5) | 0.0674 (4) | 0.0395 (3) | −0.0125 (3) | 0.0133 (3) | −0.0074 (2) |
S1 | 0.0502 (3) | 0.0336 (3) | 0.0509 (3) | −0.0091 (2) | 0.0039 (2) | −0.0026 (2) |
N1 | 0.0381 (9) | 0.0326 (9) | 0.0397 (8) | −0.0015 (6) | 0.0048 (6) | −0.0006 (6) |
C1 | 0.0482 (12) | 0.0366 (11) | 0.0496 (11) | −0.0008 (9) | 0.0011 (8) | −0.0052 (8) |
C2 | 0.0564 (13) | 0.0527 (14) | 0.0458 (11) | 0.0039 (10) | −0.0028 (9) | −0.0121 (9) |
C3 | 0.0522 (12) | 0.0608 (14) | 0.0411 (10) | 0.0081 (10) | 0.0009 (9) | 0.0016 (9) |
C4 | 0.0495 (13) | 0.0461 (12) | 0.0497 (11) | 0.0014 (9) | 0.0033 (9) | 0.0089 (9) |
C5 | 0.0422 (11) | 0.0392 (11) | 0.0440 (10) | −0.0006 (8) | −0.0007 (8) | −0.0034 (8) |
C6 | 0.0307 (10) | 0.0349 (10) | 0.0422 (10) | 0.0030 (7) | −0.0006 (7) | −0.0025 (7) |
C7 | 0.0282 (9) | 0.0308 (10) | 0.0453 (10) | 0.0003 (7) | −0.0003 (7) | −0.0011 (7) |
C9 | 0.0305 (9) | 0.0334 (10) | 0.0423 (9) | 0.0018 (7) | 0.0032 (7) | 0.0024 (7) |
C10 | 0.0418 (11) | 0.0343 (10) | 0.0427 (10) | −0.0029 (8) | 0.0041 (8) | 0.0000 (8) |
C11 | 0.0456 (12) | 0.0464 (12) | 0.0388 (10) | 0.0020 (9) | 0.0045 (8) | 0.0000 (8) |
C12 | 0.0472 (12) | 0.0511 (13) | 0.0457 (11) | 0.0002 (9) | 0.0102 (8) | 0.0110 (9) |
C13 | 0.0435 (11) | 0.0398 (11) | 0.0545 (11) | −0.0034 (9) | 0.0078 (9) | 0.0080 (9) |
C14 | 0.0339 (10) | 0.0348 (10) | 0.0462 (10) | 0.0002 (8) | 0.0025 (7) | 0.0014 (8) |
Cl1—C11 | 1.7453 (19) | C4—H4A | 0.9300 |
S1—C14 | 1.7279 (18) | C5—C6 | 1.395 (3) |
S1—C7 | 1.7566 (18) | C5—H5A | 0.9300 |
N1—C7 | 1.301 (2) | C6—C7 | 1.466 (2) |
N1—C9 | 1.382 (2) | C9—C10 | 1.398 (2) |
C1—C2 | 1.379 (3) | C9—C14 | 1.402 (2) |
C1—C6 | 1.395 (3) | C10—C11 | 1.376 (2) |
C1—H1B | 0.9300 | C10—H10A | 0.9300 |
C2—C3 | 1.371 (3) | C11—C12 | 1.390 (3) |
C2—H2A | 0.9300 | C12—C13 | 1.377 (3) |
C3—C4 | 1.386 (3) | C12—H12A | 0.9300 |
C3—H3A | 0.9300 | C13—C14 | 1.395 (3) |
C4—C5 | 1.377 (3) | C13—H13A | 0.9300 |
C14—S1—C7 | 88.93 (8) | N1—C7—S1 | 115.77 (13) |
C7—N1—C9 | 110.29 (15) | C6—C7—S1 | 120.63 (13) |
C2—C1—C6 | 120.18 (19) | N1—C9—C10 | 124.31 (16) |
C2—C1—H1B | 119.9 | N1—C9—C14 | 115.66 (15) |
C6—C1—H1B | 119.9 | C10—C9—C14 | 120.02 (15) |
C3—C2—C1 | 120.75 (19) | C11—C10—C9 | 117.48 (18) |
C3—C2—H2A | 119.6 | C11—C10—H10A | 121.3 |
C1—C2—H2A | 119.6 | C9—C10—H10A | 121.3 |
C2—C3—C4 | 119.73 (18) | C10—C11—C12 | 122.76 (17) |
C2—C3—H3A | 120.1 | C10—C11—Cl1 | 118.90 (15) |
C4—C3—H3A | 120.1 | C12—C11—Cl1 | 118.33 (14) |
C5—C4—C3 | 120.16 (19) | C13—C12—C11 | 120.25 (17) |
C5—C4—H4A | 119.9 | C13—C12—H12A | 119.9 |
C3—C4—H4A | 119.9 | C11—C12—H12A | 119.9 |
C4—C5—C6 | 120.47 (18) | C12—C13—C14 | 118.07 (18) |
C4—C5—H5A | 119.8 | C12—C13—H13A | 121.0 |
C6—C5—H5A | 119.8 | C14—C13—H13A | 121.0 |
C1—C6—C5 | 118.72 (17) | C13—C14—C9 | 121.40 (17) |
C1—C6—C7 | 121.69 (17) | C13—C14—S1 | 129.28 (15) |
C5—C6—C7 | 119.52 (15) | C9—C14—S1 | 109.32 (12) |
N1—C7—C6 | 123.50 (16) | ||
C6—C1—C2—C3 | 0.1 (3) | C7—N1—C9—C14 | −0.3 (2) |
C1—C2—C3—C4 | 0.0 (3) | N1—C9—C10—C11 | −178.70 (17) |
C2—C3—C4—C5 | 0.1 (3) | C14—C9—C10—C11 | 0.1 (3) |
C3—C4—C5—C6 | −0.2 (3) | C9—C10—C11—C12 | −0.4 (3) |
C2—C1—C6—C5 | −0.1 (3) | C9—C10—C11—Cl1 | 178.89 (14) |
C2—C1—C6—C7 | −177.15 (17) | C10—C11—C12—C13 | 0.5 (3) |
C4—C5—C6—C1 | 0.2 (3) | Cl1—C11—C12—C13 | −178.86 (15) |
C4—C5—C6—C7 | 177.29 (16) | C11—C12—C13—C14 | −0.2 (3) |
C9—N1—C7—C6 | −175.21 (15) | C12—C13—C14—C9 | −0.2 (3) |
C9—N1—C7—S1 | 1.28 (19) | C12—C13—C14—S1 | 179.72 (15) |
C1—C6—C7—N1 | 177.03 (17) | N1—C9—C14—C13 | 179.11 (17) |
C5—C6—C7—N1 | 0.0 (3) | C10—C9—C14—C13 | 0.2 (3) |
C1—C6—C7—S1 | 0.7 (2) | N1—C9—C14—S1 | −0.8 (2) |
C5—C6—C7—S1 | −176.27 (14) | C10—C9—C14—S1 | −179.71 (14) |
C14—S1—C7—N1 | −1.50 (15) | C7—S1—C14—C13 | −178.71 (18) |
C14—S1—C7—C6 | 175.10 (14) | C7—S1—C14—C9 | 1.20 (14) |
C7—N1—C9—C10 | 178.56 (17) |
Experimental details
Crystal data | |
Chemical formula | C13H8ClNS |
Mr | 245.71 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 273 |
a, b, c (Å) | 7.4057 (9), 5.9100 (7), 25.165 (3) |
β (°) | 93.402 (3) |
V (Å3) | 1099.5 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.50 |
Crystal size (mm) | 0.36 × 0.13 × 0.09 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.840, 0.956 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6221, 2013, 1706 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.093, 1.04 |
No. of reflections | 2013 |
No. of parameters | 145 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.24, −0.21 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), PARST (Nardelli, 1995) and PLATON (Spek, 2009).
Acknowledgements
The authors thank OPCW, The Netherlands, and the Higher Education Commission, Pakistan (project No. 1910), for their financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Benzothiazoles represent an important class of heterocyclic compounds and are known to have numerous biological activities, including antimicrobial, antimalarial, anticancer, anti-inflamatory, antidiabetic, anticonvulsant, antitumor and anthelmintic properties (Venkatesh & Pandeya, 2009; Sreenivasa et al., 2009; Kok et al., 2008; Siddiqui et al., 2007; Maharan et al., 2007; Pattan et al., 2005; Hout et al., 2004; Chohan et al., 2003; Bénéteau et al., 1999). The title compound was prepared as part of an ongoing research effort to synthesize libraries of hetereocyclic compounds and evaluate thei different biological activities.
In the structure (Fig. 1) of the title compound, C13H8ClNS, the dihedral angle between the benzothiazole ring system and the phenyl ring is 7.11 (8)°. The bond lengths and angles are similar to those in structurally related benzothiazole compounds (Lakshmanan et al., 2011; Zhang et al., 2008). In the crystal structure the molecules are arranged parallel to the c-axis (Fig. 2).