organic compounds
N-Ethyl-2-[1-(2-hydroxy-6-methoxyphenyl)ethylidene]hydrazinecarbothioamide
aDepartment of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA
*Correspondence e-mail: jjasinski@keene.edu
In the title compound, C12H17N3O2S, the dihedral angle between the mean planes of the hydrazinecarbothioamide group and the benzene ring is 86.8 (4)°. In the crystal, intermolecular O—H⋯S hydrogen bonds link the molecules into chains along [001]. The crystal studied was an the refined ratio of the twin components being 0.98021 (3):0.01978 (7).
Related literature
For thiosemicarbazone structures and their biological activity, see: Lobana et al. (2009). For thiosemicarbazones as ligands for metal-catalyzed reactions or hydrogenations, see: Xie et al. (2010); Pelagatti et al. (1998). For reference bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
|
Data collection: CrysAlis PRO (Oxford Diffraction, 2010); cell CrysAlis PRO; data reduction: CrysAlis RED (Oxford Diffraction, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536812039323/cv5339sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812039323/cv5339Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812039323/cv5339Isup3.cml
A 50 ml round-bottomed flask was charged with 0.507 g (3.05 mmol) of 2'-hydroxy-6'-methoxyacetophenone and 0.363 g (3.05 mmol) of 4-ethyl-3-thiosemicarbazide followed by 35 ml of methanol, resulting in a clear yellow solution. The solution was refluxed for 5 h, and then the solvent was removed by rotary evaporation. The product was dissolved into 40°C acetonitrile and slowly allowed to cool to 0°C. Translucent crystals were observed after 48 h. (m.p. 458–460 K).
Atoms H1A and H2 were located on a difference map and refined isotropically. The remaining H atoms were placed in their calculated positions and then refined using the riding model, with C—H lengths of 0.93 Å (CH), 0.97 Å (CH2) or 0.96 Å (CH3) and the O—H length of 0.82 Å. The isotropic displacement parameters for these atoms were set to 1.2 (CH, CH2) or 1.5 (CH3, OH) times Ueq of the parent atom. The structure was refined as an
with the -1 0 0 0 -1 0 0 0 -1 2 and the refined ratio of twin components being 0.98021 (3):0.01978 (7).Thiosemicarbazones are an important class of ligands whose metal complex structures and biological activity have been extensively investigated (Lobana et al., 2009). Recently, thiosemicarbazones have been studied as ligands for metal catalyzed reactions such as Mizoroki–Heck couplings (Xie et al., 2010) and hydrogenations (Pelagatti et al., 1998). The
of a novel thiosemicarbazone molecule is reported here.In the title compound, C12H17N3O2S (Fig. 1), the dihedral angle between the mean plane of the hydrazinecarbothioamide group (N1/S1/C3/N2/N3) and benzene ring is 86.8 (4)°. Bond lengths are in normal ranges (Allen et al., 1987). In the crystal, the intermolecular O—H···S hydrogen bonds (Table 1) link the molecules into chains in [001] (Fig. 2).
For thiosemicarbazone structures and their biological activity, see: Lobana et al. (2009). For thiosemicarbazones as ligands for metal-catalyzed reactions or hydrogenations, see: Xie et al. (2010); Pelagatti et al. (1998). For reference bond-length data, see: Allen et al. (1987).
Data collection: CrysAlis PRO (Oxford Diffraction, 2010); cell
CrysAlis PRO (Oxford Diffraction, 2010); data reduction: CrysAlis RED (Oxford Diffraction, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C12H17N3O2S | F(000) = 284 |
Mr = 267.35 | Dx = 1.277 Mg m−3 |
Monoclinic, Pc | Mo Kα radiation, λ = 0.71070 Å |
Hall symbol: P -2yc | Cell parameters from 2153 reflections |
a = 8.5681 (6) Å | θ = 3.2–32.3° |
b = 8.0393 (5) Å | µ = 0.23 mm−1 |
c = 10.3808 (8) Å | T = 173 K |
β = 103.510 (7)° | Chunk, colourless |
V = 695.26 (8) Å3 | 0.46 × 0.32 × 0.24 mm |
Z = 2 |
Oxford Xcalibur (Eos, Gemini) diffractometer | 3987 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 3287 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
Detector resolution: 16.1500 pixels mm-1 | θmax = 32.3°, θmin = 3.2° |
ω scans | h = −12→11 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2010) | k = −11→11 |
Tmin = 0.974, Tmax = 1.000 | l = −15→15 |
7338 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.128 | w = 1/[σ2(Fo2) + (0.0636P)2 + 0.0627P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
3987 reflections | Δρmax = 0.63 e Å−3 |
173 parameters | Δρmin = −0.21 e Å−3 |
2 restraints | Absolute structure: Flack (1983), with 1510 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.00 (8) |
C12H17N3O2S | V = 695.26 (8) Å3 |
Mr = 267.35 | Z = 2 |
Monoclinic, Pc | Mo Kα radiation |
a = 8.5681 (6) Å | µ = 0.23 mm−1 |
b = 8.0393 (5) Å | T = 173 K |
c = 10.3808 (8) Å | 0.46 × 0.32 × 0.24 mm |
β = 103.510 (7)° |
Oxford Xcalibur (Eos, Gemini) diffractometer | 3987 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2010) | 3287 reflections with I > 2σ(I) |
Tmin = 0.974, Tmax = 1.000 | Rint = 0.030 |
7338 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.128 | Δρmax = 0.63 e Å−3 |
S = 1.05 | Δρmin = −0.21 e Å−3 |
3987 reflections | Absolute structure: Flack (1983), with 1510 Friedel pairs |
173 parameters | Absolute structure parameter: 0.00 (8) |
2 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.55727 (6) | 0.29581 (7) | 0.59523 (6) | 0.04628 (16) | |
O1 | 0.7690 (2) | 0.0256 (2) | 1.0893 (2) | 0.0585 (5) | |
H1 | 0.7155 | −0.0595 | 1.0865 | 0.088* | |
O2 | 1.1860 (2) | 0.2488 (3) | 0.92524 (19) | 0.0549 (5) | |
N1 | 0.6144 (3) | 0.5442 (3) | 0.7677 (2) | 0.0457 (5) | |
H1A | 0.637 (4) | 0.575 (4) | 0.839 (3) | 0.050 (9)* | |
N2 | 0.7546 (2) | 0.3070 (2) | 0.83163 (19) | 0.0379 (4) | |
H2 | 0.782 (3) | 0.198 (4) | 0.823 (3) | 0.047 (8)* | |
N3 | 0.8239 (2) | 0.3855 (2) | 0.94956 (18) | 0.0344 (4) | |
C1 | 0.4947 (5) | 0.8165 (4) | 0.7392 (3) | 0.0657 (9) | |
H1B | 0.4404 | 0.7948 | 0.8086 | 0.098* | |
H1C | 0.4323 | 0.8925 | 0.6764 | 0.098* | |
H1D | 0.5980 | 0.8644 | 0.7765 | 0.098* | |
C2 | 0.5155 (4) | 0.6584 (4) | 0.6716 (3) | 0.0568 (7) | |
H2A | 0.4116 | 0.6086 | 0.6348 | 0.068* | |
H2B | 0.5674 | 0.6800 | 0.5996 | 0.068* | |
C3 | 0.6451 (2) | 0.3906 (2) | 0.7390 (2) | 0.0346 (4) | |
C4 | 0.9297 (2) | 0.3025 (2) | 1.0323 (2) | 0.0333 (4) | |
C5 | 0.9822 (2) | 0.1311 (3) | 1.0085 (2) | 0.0345 (4) | |
C6 | 1.1173 (3) | 0.1064 (3) | 0.9568 (2) | 0.0415 (5) | |
C7 | 1.1719 (3) | −0.0556 (4) | 0.9435 (3) | 0.0523 (6) | |
H7 | 1.2623 | −0.0731 | 0.9102 | 0.063* | |
C8 | 1.0913 (4) | −0.1879 (3) | 0.9799 (3) | 0.0532 (7) | |
H8 | 1.1301 | −0.2948 | 0.9731 | 0.064* | |
C9 | 0.9556 (3) | −0.1677 (3) | 1.0258 (3) | 0.0494 (6) | |
H9 | 0.9002 | −0.2595 | 1.0464 | 0.059* | |
C10 | 0.9014 (3) | −0.0067 (3) | 1.0412 (2) | 0.0411 (5) | |
C11 | 1.0021 (3) | 0.3811 (3) | 1.1618 (3) | 0.0510 (6) | |
H11A | 0.9585 | 0.4908 | 1.1644 | 0.077* | |
H11B | 1.1163 | 0.3883 | 1.1730 | 0.077* | |
H11C | 0.9782 | 0.3151 | 1.2319 | 0.077* | |
C12 | 1.3067 (4) | 0.2315 (5) | 0.8506 (3) | 0.0717 (9) | |
H12A | 1.3976 | 0.1733 | 0.9029 | 0.107* | |
H12B | 1.3397 | 0.3398 | 0.8281 | 0.107* | |
H12C | 1.2636 | 0.1700 | 0.7710 | 0.107* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0464 (3) | 0.0416 (3) | 0.0444 (3) | 0.0038 (3) | −0.0023 (2) | −0.0014 (3) |
O1 | 0.0607 (11) | 0.0363 (9) | 0.0872 (14) | 0.0008 (8) | 0.0352 (11) | 0.0062 (10) |
O2 | 0.0481 (10) | 0.0661 (12) | 0.0562 (12) | 0.0008 (9) | 0.0238 (9) | 0.0002 (9) |
N1 | 0.0463 (10) | 0.0360 (10) | 0.0482 (12) | 0.0125 (8) | −0.0027 (9) | 0.0005 (9) |
N2 | 0.0434 (9) | 0.0266 (8) | 0.0390 (10) | 0.0100 (7) | 0.0001 (8) | 0.0012 (7) |
N3 | 0.0367 (8) | 0.0284 (8) | 0.0371 (9) | 0.0056 (7) | 0.0066 (7) | 0.0024 (7) |
C1 | 0.100 (3) | 0.0467 (15) | 0.0512 (15) | 0.0374 (16) | 0.0185 (16) | 0.0129 (12) |
C2 | 0.0634 (16) | 0.0465 (14) | 0.0556 (16) | 0.0212 (12) | 0.0042 (13) | 0.0089 (12) |
C3 | 0.0312 (9) | 0.0284 (9) | 0.0433 (11) | 0.0026 (8) | 0.0066 (8) | 0.0047 (8) |
C4 | 0.0366 (10) | 0.0291 (9) | 0.0344 (10) | 0.0049 (7) | 0.0089 (8) | 0.0048 (8) |
C5 | 0.0378 (10) | 0.0314 (10) | 0.0319 (9) | 0.0105 (8) | 0.0031 (8) | 0.0030 (8) |
C6 | 0.0382 (10) | 0.0493 (13) | 0.0344 (10) | 0.0081 (9) | 0.0034 (9) | −0.0021 (9) |
C7 | 0.0464 (12) | 0.0651 (17) | 0.0438 (12) | 0.0242 (12) | 0.0074 (10) | −0.0085 (12) |
C8 | 0.0653 (16) | 0.0414 (13) | 0.0442 (13) | 0.0226 (12) | −0.0046 (12) | −0.0054 (10) |
C9 | 0.0603 (15) | 0.0317 (11) | 0.0504 (14) | 0.0123 (10) | 0.0012 (12) | 0.0045 (10) |
C10 | 0.0426 (11) | 0.0355 (10) | 0.0432 (12) | 0.0084 (9) | 0.0062 (9) | 0.0030 (9) |
C11 | 0.0660 (15) | 0.0382 (12) | 0.0429 (13) | 0.0100 (11) | 0.0007 (11) | −0.0026 (10) |
C12 | 0.0528 (16) | 0.114 (3) | 0.0560 (17) | −0.0008 (17) | 0.0279 (14) | −0.0007 (18) |
S1—C3 | 1.688 (2) | C4—C11 | 1.484 (3) |
O1—C10 | 1.367 (3) | C4—C5 | 1.487 (3) |
O1—H1 | 0.8200 | C5—C10 | 1.389 (3) |
O2—C6 | 1.362 (3) | C5—C6 | 1.399 (3) |
O2—C12 | 1.436 (3) | C6—C7 | 1.402 (4) |
N1—C3 | 1.311 (3) | C7—C8 | 1.368 (4) |
N1—C2 | 1.471 (3) | C7—H7 | 0.9300 |
N1—H1A | 0.76 (3) | C8—C9 | 1.365 (4) |
N2—C3 | 1.355 (3) | C8—H8 | 0.9300 |
N2—N3 | 1.382 (2) | C9—C10 | 1.396 (3) |
N2—H2 | 0.92 (3) | C9—H9 | 0.9300 |
N3—C4 | 1.281 (3) | C11—H11A | 0.9600 |
C1—C2 | 1.482 (4) | C11—H11B | 0.9600 |
C1—H1B | 0.9600 | C11—H11C | 0.9600 |
C1—H1C | 0.9600 | C12—H12A | 0.9600 |
C1—H1D | 0.9600 | C12—H12B | 0.9600 |
C2—H2A | 0.9700 | C12—H12C | 0.9600 |
C2—H2B | 0.9700 | ||
C10—O1—H1 | 109.5 | C6—C5—C4 | 120.3 (2) |
C6—O2—C12 | 117.1 (3) | O2—C6—C5 | 114.6 (2) |
C3—N1—C2 | 123.2 (2) | O2—C6—C7 | 125.7 (2) |
C3—N1—H1A | 121 (2) | C5—C6—C7 | 119.7 (2) |
C2—N1—H1A | 116 (2) | C8—C7—C6 | 119.6 (2) |
C3—N2—N3 | 119.04 (16) | C8—C7—H7 | 120.2 |
C3—N2—H2 | 124.0 (18) | C6—C7—H7 | 120.2 |
N3—N2—H2 | 116.8 (18) | C9—C8—C7 | 122.0 (2) |
C4—N3—N2 | 116.48 (17) | C9—C8—H8 | 119.0 |
C2—C1—H1B | 109.5 | C7—C8—H8 | 119.0 |
C2—C1—H1C | 109.5 | C8—C9—C10 | 118.9 (3) |
H1B—C1—H1C | 109.5 | C8—C9—H9 | 120.5 |
C2—C1—H1D | 109.5 | C10—C9—H9 | 120.5 |
H1B—C1—H1D | 109.5 | O1—C10—C5 | 116.17 (19) |
H1C—C1—H1D | 109.5 | O1—C10—C9 | 123.0 (2) |
N1—C2—C1 | 109.1 (2) | C5—C10—C9 | 120.8 (2) |
N1—C2—H2A | 109.9 | C4—C11—H11A | 109.5 |
C1—C2—H2A | 109.9 | C4—C11—H11B | 109.5 |
N1—C2—H2B | 109.9 | H11A—C11—H11B | 109.5 |
C1—C2—H2B | 109.9 | C4—C11—H11C | 109.5 |
H2A—C2—H2B | 108.3 | H11A—C11—H11C | 109.5 |
N1—C3—N2 | 116.6 (2) | H11B—C11—H11C | 109.5 |
N1—C3—S1 | 123.69 (17) | O2—C12—H12A | 109.5 |
N2—C3—S1 | 119.71 (15) | O2—C12—H12B | 109.5 |
N3—C4—C11 | 117.74 (18) | H12A—C12—H12B | 109.5 |
N3—C4—C5 | 124.46 (19) | O2—C12—H12C | 109.5 |
C11—C4—C5 | 117.79 (18) | H12A—C12—H12C | 109.5 |
C10—C5—C6 | 119.0 (2) | H12B—C12—H12C | 109.5 |
C10—C5—C4 | 120.74 (18) | ||
C3—N2—N3—C4 | −178.22 (19) | C10—C5—C6—O2 | 178.6 (2) |
C3—N1—C2—C1 | 175.6 (3) | C4—C5—C6—O2 | −3.4 (3) |
C2—N1—C3—N2 | 171.6 (2) | C10—C5—C6—C7 | −2.3 (3) |
C2—N1—C3—S1 | −8.0 (3) | C4—C5—C6—C7 | 175.6 (2) |
N3—N2—C3—N1 | 1.3 (3) | O2—C6—C7—C8 | 179.7 (2) |
N3—N2—C3—S1 | −179.12 (15) | C5—C6—C7—C8 | 0.7 (4) |
N2—N3—C4—C11 | −177.9 (2) | C6—C7—C8—C9 | 1.8 (4) |
N2—N3—C4—C5 | 0.6 (3) | C7—C8—C9—C10 | −2.7 (4) |
N3—C4—C5—C10 | −87.9 (3) | C6—C5—C10—O1 | −179.0 (2) |
C11—C4—C5—C10 | 90.5 (3) | C4—C5—C10—O1 | 3.0 (3) |
N3—C4—C5—C6 | 94.1 (3) | C6—C5—C10—C9 | 1.5 (3) |
C11—C4—C5—C6 | −87.4 (3) | C4—C5—C10—C9 | −176.5 (2) |
C12—O2—C6—C5 | −169.3 (2) | C8—C9—C10—O1 | −178.5 (2) |
C12—O2—C6—C7 | 11.7 (4) | C8—C9—C10—C5 | 1.0 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···S1i | 0.82 | 2.35 | 3.1655 (19) | 175 |
Symmetry code: (i) x, −y, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C12H17N3O2S |
Mr | 267.35 |
Crystal system, space group | Monoclinic, Pc |
Temperature (K) | 173 |
a, b, c (Å) | 8.5681 (6), 8.0393 (5), 10.3808 (8) |
β (°) | 103.510 (7) |
V (Å3) | 695.26 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.23 |
Crystal size (mm) | 0.46 × 0.32 × 0.24 |
Data collection | |
Diffractometer | Oxford Xcalibur (Eos, Gemini) |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2010) |
Tmin, Tmax | 0.974, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7338, 3987, 3287 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.752 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.128, 1.05 |
No. of reflections | 3987 |
No. of parameters | 173 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.63, −0.21 |
Absolute structure | Flack (1983), with 1510 Friedel pairs |
Absolute structure parameter | 0.00 (8) |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2010), CrysAlis RED (Oxford Diffraction, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···S1i | 0.82 | 2.35 | 3.1655 (19) | 175.2 |
Symmetry code: (i) x, −y, z+1/2. |
Acknowledgements
JPJ acknowledges the NSF–MRI program (grant No. CHE1039027) for funds to purchase the X-ray diffractometer.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CSD CrossRef Web of Science Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Lobana, T. S., Sharma, R., Bawa, G. & Khanna, S. (2009). Coord. Chem. Rev. 253, 977–1055. Web of Science CrossRef CAS Google Scholar
Oxford Diffraction (2010). CrysAlis PRO and CrysAlis RED. Oxford Diffraction Ltd, Yarnton, Oxfordshire, England. Google Scholar
Pelagatti, P., Venturini, A., Carcelli, M., Costa, M., Bacchi, A., Pelizzi, G. & Pelizza, C. (1998). J. Chem. Soc. Dalton Trans. pp. 2715–2721. Web of Science CSD CrossRef Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Xie, G., Chellan, P., Mao, J., Chibale, K. & Smith, G. S. (2010). Adv. Synth. Catal. 352, 1641–1647. Web of Science CrossRef CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Thiosemicarbazones are an important class of ligands whose metal complex structures and biological activity have been extensively investigated (Lobana et al., 2009). Recently, thiosemicarbazones have been studied as ligands for metal catalyzed reactions such as Mizoroki–Heck couplings (Xie et al., 2010) and hydrogenations (Pelagatti et al., 1998). The crystal structure of a novel thiosemicarbazone molecule is reported here.
In the title compound, C12H17N3O2S (Fig. 1), the dihedral angle between the mean plane of the hydrazinecarbothioamide group (N1/S1/C3/N2/N3) and benzene ring is 86.8 (4)°. Bond lengths are in normal ranges (Allen et al., 1987). In the crystal, the intermolecular O—H···S hydrogen bonds (Table 1) link the molecules into chains in [001] (Fig. 2).