organic compounds
Quinoline-8-sulfonamide1
aDepartment of Organic Chemistry, The Medical University of Silesia, Jagiellońska 4, 41-200 Sosnowiec, Poland, and bInstitute of Physics, University of Silesia, Uniwersytecka 4, 40-007 Katowice, Poland
*Correspondence e-mail: kmarciniec@sum.edu.pl
In the title compound, C9H8N2O2S, the sulfamoyl NH2 group is involved in intramolecular N—H⋯N and intermolecular N—H⋯O hydrogen bonding. In the crystal, molecules are linked via pairs of N—H⋯O hydrogen bonds, forming inversion dimers, which are further associated through π–π stacking interactions between the quinoline benzene rings [centroid–centroid distance = 3.649 (1) Å] into a one-dimensional polymeric structure extending along the a axis.
Related literature
For the use of the quinolinesulfamoyl unit in medicinal chemistry, see: Borras et al. (1999); Eveloch et al. (1981); Zajdel et al. (2011, 2012). For the synthesis, see: Maślankiewicz et al. (2007). For hydrogen-bonding motifs in sufonamides, see: Adsmond & Grant (2001). For graph-set notation of hydrgen-bond motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis CCD (Oxford Diffraction, 2008); cell CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Jmol (Hanson, 2010) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536812036963/gk2515sup1.cif
contains datablocks I, global. DOI:Supporting information file. DOI: https://doi.org/10.1107/S1600536812036963/gk2515Isup2.mol
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812036963/gk2515Isup3.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812036963/gk2515Isup4.cml
The title compound was prepared by the reaction of 8-quinolinesulfonylchloride with an excess ammonia at temperature of 45°C according to the procedure reported by Maślankiewicz et al. (2007). Single crystals of the title compound suitable for X-ray
were obtained by recrystallization from an ethanolic solution.The hydrogen atoms participating in hydrogen bonding were located in a difference Fourier map and freely refined. Other hydrogen atoms were introduced in geometrically idealized positions and refined using a riding-model approximation with C—H distances of 0.93 Å and with Uiso(H)= 1.2Ueq(C).
Quinolinesulfamoyl moiety is being more and more frequently incorporated into molecules of biologically active compounds such as carbonic anhydrase inhibitors (Borras et al., 1999) and 5-HT receptors ligands (Zajdel et al., 2011; Zajdel et al., 2012). Since the quinoline drugs as well as
strongly interact with enzymatic receptors via their nitrogen atoms (Eveloch et al., 1981) we studied the of the title compound, to evaluate the spatial environment of the nitrogen atoms.The
of quinoline-8-sulfonamide with the adopted atomic numbering is presented in Fig.1. The sulfonamide group participates in both intra- and intermolecular hydrogen bonding. The H2 atom of the sulfamoyl group shows an intramolecular contact with the N1 atom of the quinoline ring system (Table 1) resulting in the graph-set motif of S(6) (Bernstein et al., 1995). In the crystal, the molecules form dimers through N2—H1···O2 hydrogen bonds (Table 1). It is interesting to note that the most commonly observed hydrogen bonding in in the studies reported by Adsmond &Grant (2001) consing of S=O···H—N chains (50 occurrences in 39 different sulfonamide structures) is absent in the title compound.A π-π stacking interaction is observed between the benzene C4A/C5—C8/C8A rings of neighboring dimers with the centroid-to-centroid distance, Cg···Cg (1 - x, 2 - y, -z) of 3.649 (1) Å and of 3.373 (1) Å (Fig. 2). The π–π stacking interaction connects the dimers along the [100] direction forming one-dimesional polymeric structure.
For the use of the quinolinesulfamoyl unit in medicinal chemistry, see: Borras et al. (1999); Eveloch et al. (1981); Zajdel et al. (2011, 2012). For the synthesis, see: Maślankiewicz et al. (2007). For hydrogen-bonding motifs in sufonamides, see: Adsmond & Grant (2001). For graph-set notation of hydrgen-bond motifs, see: Bernstein et al. (1995).
Data collection: CrysAlis CCD (Oxford Diffraction, 2008); cell
CrysAlis CCD (Oxford Diffraction, 2008); data reduction: CrysAlis RED (Oxford Diffraction, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Jmol (Hanson, 2010) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C9H8N2O2S | F(000) = 432 |
Mr = 208.23 | Dx = 1.498 Mg m−3 |
Monoclinic, P21/n | Melting point: 457.2 K |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 8.9431 (3) Å | Cell parameters from 5251 reflections |
b = 10.4542 (2) Å | θ = 3.1–34.5° |
c = 10.4648 (2) Å | µ = 0.32 mm−1 |
β = 109.313 (2)° | T = 298 K |
V = 923.33 (4) Å3 | Polyhedron, colourless |
Z = 4 | 0.34 × 0.21 × 0.18 mm |
Oxford Diffraction Xcalibur Sapphire3 CCD diffractometer | 1636 independent reflections |
Radiation source: fine-focus sealed tube | 1446 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.014 |
Detector resolution: 16.0328 pixels mm-1 | θmax = 25.1°, θmin = 3.1° |
ω–scan | h = −8→10 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2008) | k = −12→11 |
Tmin = 0.898, Tmax = 0.944 | l = −12→10 |
5936 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.095 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.97 | w = 1/[σ2(Fo2) + (0.075P)2 + 0.1368P] where P = (Fo2 + 2Fc2)/3 |
1636 reflections | (Δ/σ)max = 0.001 |
135 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.36 e Å−3 |
C9H8N2O2S | V = 923.33 (4) Å3 |
Mr = 208.23 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 8.9431 (3) Å | µ = 0.32 mm−1 |
b = 10.4542 (2) Å | T = 298 K |
c = 10.4648 (2) Å | 0.34 × 0.21 × 0.18 mm |
β = 109.313 (2)° |
Oxford Diffraction Xcalibur Sapphire3 CCD diffractometer | 1636 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2008) | 1446 reflections with I > 2σ(I) |
Tmin = 0.898, Tmax = 0.944 | Rint = 0.014 |
5936 measured reflections |
R[F2 > 2σ(F2)] = 0.029 | 0 restraints |
wR(F2) = 0.095 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.97 | Δρmax = 0.31 e Å−3 |
1636 reflections | Δρmin = −0.36 e Å−3 |
135 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.66396 (4) | 0.87959 (4) | 0.17318 (4) | 0.03962 (18) | |
O1 | 0.69562 (15) | 0.80754 (13) | 0.29483 (13) | 0.0560 (4) | |
O2 | 0.52811 (14) | 0.84522 (13) | 0.05984 (13) | 0.0542 (4) | |
N1 | 0.98319 (16) | 0.98818 (14) | 0.31765 (14) | 0.0438 (3) | |
N2 | 0.6409 (2) | 1.02696 (16) | 0.2070 (2) | 0.0501 (4) | |
C2 | 1.1202 (2) | 1.03811 (18) | 0.3911 (2) | 0.0556 (5) | |
H2 | 1.1242 | 1.0848 | 0.4678 | 0.067* | |
C3 | 1.2598 (2) | 1.0245 (2) | 0.3596 (2) | 0.0637 (6) | |
H3 | 1.3541 | 1.0596 | 0.4160 | 0.076* | |
C4 | 1.2566 (2) | 0.96016 (18) | 0.2470 (2) | 0.0568 (5) | |
H4 | 1.3485 | 0.9520 | 0.2245 | 0.068* | |
C4A | 1.1134 (2) | 0.90515 (16) | 0.16339 (19) | 0.0430 (4) | |
C5 | 1.0985 (2) | 0.83950 (17) | 0.0427 (2) | 0.0513 (5) | |
H5 | 1.1871 | 0.8287 | 0.0161 | 0.062* | |
C6 | 0.9568 (2) | 0.79162 (18) | −0.0357 (2) | 0.0540 (5) | |
H6 | 0.9487 | 0.7495 | −0.1161 | 0.065* | |
C7 | 0.8221 (2) | 0.80560 (16) | 0.00428 (17) | 0.0448 (4) | |
H7 | 0.7254 | 0.7722 | −0.0494 | 0.054* | |
C8 | 0.83294 (17) | 0.86792 (14) | 0.12156 (15) | 0.0341 (4) | |
C8A | 0.97904 (17) | 0.92153 (14) | 0.20522 (15) | 0.0351 (3) | |
H1N | 0.603 (3) | 1.071 (2) | 0.133 (3) | 0.059 (6)* | |
H2N | 0.722 (3) | 1.057 (2) | 0.263 (3) | 0.065 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0313 (3) | 0.0447 (3) | 0.0465 (3) | −0.00383 (16) | 0.01779 (19) | 0.00320 (17) |
O1 | 0.0532 (8) | 0.0673 (9) | 0.0553 (8) | −0.0052 (6) | 0.0284 (6) | 0.0151 (6) |
O2 | 0.0352 (6) | 0.0582 (8) | 0.0648 (8) | −0.0102 (5) | 0.0106 (6) | −0.0017 (6) |
N1 | 0.0371 (7) | 0.0500 (8) | 0.0436 (8) | −0.0022 (6) | 0.0122 (6) | −0.0040 (6) |
N2 | 0.0378 (8) | 0.0549 (10) | 0.0613 (10) | 0.0023 (7) | 0.0215 (8) | −0.0066 (9) |
C2 | 0.0484 (10) | 0.0542 (11) | 0.0545 (11) | −0.0042 (8) | 0.0039 (8) | −0.0058 (8) |
C3 | 0.0357 (10) | 0.0557 (12) | 0.0876 (16) | −0.0070 (8) | 0.0040 (10) | 0.0055 (11) |
C4 | 0.0326 (8) | 0.0488 (10) | 0.0919 (15) | 0.0036 (7) | 0.0247 (9) | 0.0119 (10) |
C4A | 0.0367 (9) | 0.0358 (8) | 0.0629 (11) | 0.0066 (7) | 0.0250 (8) | 0.0120 (7) |
C5 | 0.0562 (11) | 0.0431 (9) | 0.0718 (12) | 0.0111 (8) | 0.0443 (10) | 0.0076 (9) |
C6 | 0.0732 (13) | 0.0457 (10) | 0.0560 (10) | 0.0069 (9) | 0.0389 (10) | −0.0030 (8) |
C7 | 0.0509 (10) | 0.0404 (9) | 0.0448 (9) | −0.0021 (7) | 0.0181 (8) | −0.0018 (7) |
C8 | 0.0337 (8) | 0.0322 (8) | 0.0396 (8) | 0.0008 (6) | 0.0166 (6) | 0.0045 (6) |
C8A | 0.0333 (8) | 0.0328 (8) | 0.0418 (8) | 0.0017 (6) | 0.0161 (7) | 0.0047 (6) |
S1—O1 | 1.4247 (13) | C4—C4A | 1.413 (3) |
S1—O2 | 1.4348 (12) | C4—H4 | 0.9300 |
S1—N2 | 1.6092 (17) | C4A—C5 | 1.405 (3) |
S1—C8 | 1.7693 (15) | C4A—C8A | 1.419 (2) |
N1—C2 | 1.320 (2) | C5—C6 | 1.357 (3) |
N1—C8A | 1.357 (2) | C5—H5 | 0.9300 |
N2—H1N | 0.87 (2) | C6—C7 | 1.407 (2) |
N2—H2N | 0.83 (2) | C6—H6 | 0.9300 |
C2—C3 | 1.400 (3) | C7—C8 | 1.364 (2) |
C2—H2 | 0.9300 | C7—H7 | 0.9300 |
C3—C4 | 1.349 (3) | C8—C8A | 1.425 (2) |
C3—H3 | 0.9300 | ||
O1—S1—O2 | 118.03 (8) | C5—C4A—C4 | 123.55 (17) |
O1—S1—N2 | 108.14 (10) | C5—C4A—C8A | 119.89 (16) |
O2—S1—N2 | 106.66 (9) | C4—C4A—C8A | 116.54 (17) |
O1—S1—C8 | 107.39 (7) | C6—C5—C4A | 121.06 (15) |
O2—S1—C8 | 107.79 (8) | C6—C5—H5 | 119.5 |
N2—S1—C8 | 108.52 (7) | C4A—C5—H5 | 119.5 |
C2—N1—C8A | 117.50 (15) | C5—C6—C7 | 120.09 (16) |
S1—N2—H1N | 110.7 (15) | C5—C6—H6 | 120.0 |
S1—N2—H2N | 112.0 (16) | C7—C6—H6 | 120.0 |
H1N—N2—H2N | 115 (2) | C8—C7—C6 | 120.29 (16) |
N1—C2—C3 | 123.47 (19) | C8—C7—H7 | 119.9 |
N1—C2—H2 | 118.3 | C6—C7—H7 | 119.9 |
C3—C2—H2 | 118.3 | C7—C8—C8A | 121.20 (14) |
C4—C3—C2 | 119.58 (17) | C7—C8—S1 | 119.61 (12) |
C4—C3—H3 | 120.2 | C8A—C8—S1 | 119.17 (12) |
C2—C3—H3 | 120.2 | N1—C8A—C4A | 123.12 (15) |
C3—C4—C4A | 119.77 (17) | N1—C8A—C8 | 119.41 (13) |
C3—C4—H4 | 120.1 | C4A—C8A—C8 | 117.45 (15) |
C4A—C4—H4 | 120.1 | ||
C8A—N1—C2—C3 | −0.7 (3) | O1—S1—C8—C8A | −64.59 (13) |
N1—C2—C3—C4 | 1.7 (3) | O2—S1—C8—C8A | 167.26 (12) |
C2—C3—C4—C4A | −1.2 (3) | N2—S1—C8—C8A | 52.10 (15) |
C3—C4—C4A—C5 | 178.30 (18) | C2—N1—C8A—C4A | −0.8 (2) |
C3—C4—C4A—C8A | −0.2 (3) | C2—N1—C8A—C8 | −178.87 (15) |
C4—C4A—C5—C6 | −178.12 (17) | C5—C4A—C8A—N1 | −177.31 (15) |
C8A—C4A—C5—C6 | 0.4 (3) | C4—C4A—C8A—N1 | 1.3 (2) |
C4A—C5—C6—C7 | −1.0 (3) | C5—C4A—C8A—C8 | 0.8 (2) |
C5—C6—C7—C8 | 0.4 (3) | C4—C4A—C8A—C8 | 179.37 (14) |
C6—C7—C8—C8A | 0.8 (2) | C7—C8—C8A—N1 | 176.81 (15) |
C6—C7—C8—S1 | −177.78 (13) | S1—C8—C8A—N1 | −4.61 (19) |
O1—S1—C8—C7 | 114.02 (14) | C7—C8—C8A—C4A | −1.4 (2) |
O2—S1—C8—C7 | −14.14 (15) | S1—C8—C8A—C4A | 177.22 (11) |
N2—S1—C8—C7 | −129.30 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1N···O2i | 0.87 (2) | 2.15 (3) | 3.013 (2) | 169 (2) |
N2—H2N···N1 | 0.83 (2) | 2.33 (2) | 2.921 (2) | 129 (2) |
Symmetry code: (i) −x+1, −y+2, −z. |
Experimental details
Crystal data | |
Chemical formula | C9H8N2O2S |
Mr | 208.23 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 8.9431 (3), 10.4542 (2), 10.4648 (2) |
β (°) | 109.313 (2) |
V (Å3) | 923.33 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.32 |
Crystal size (mm) | 0.34 × 0.21 × 0.18 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Sapphire3 CCD |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2008) |
Tmin, Tmax | 0.898, 0.944 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5936, 1636, 1446 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.095, 0.97 |
No. of reflections | 1636 |
No. of parameters | 135 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.31, −0.36 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2008), CrysAlis RED (Oxford Diffraction, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), Jmol (Hanson, 2010) and Mercury (Macrae et al., 2006).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1N···O2i | 0.87 (2) | 2.15 (3) | 3.013 (2) | 169 (2) |
N2—H2N···N1 | 0.83 (2) | 2.33 (2) | 2.921 (2) | 129 (2) |
Symmetry code: (i) −x+1, −y+2, −z. |
Footnotes
1Part CXXXII in the series of Azinyl Sulfides.
Acknowledgements
This study was supported by the Medical University of Silesia, grant No. KNW-1–073/P/1/0.
References
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Quinolinesulfamoyl moiety is being more and more frequently incorporated into molecules of biologically active compounds such as carbonic anhydrase inhibitors (Borras et al., 1999) and 5-HT receptors ligands (Zajdel et al., 2011; Zajdel et al., 2012). Since the quinoline drugs as well as sulfonamides strongly interact with enzymatic receptors via their nitrogen atoms (Eveloch et al., 1981) we studied the crystal structure of the title compound, to evaluate the spatial environment of the nitrogen atoms.
The molecular conformation of quinoline-8-sulfonamide with the adopted atomic numbering is presented in Fig.1. The sulfonamide group participates in both intra- and intermolecular hydrogen bonding. The H2 atom of the sulfamoyl group shows an intramolecular contact with the N1 atom of the quinoline ring system (Table 1) resulting in the graph-set motif of S(6) (Bernstein et al., 1995). In the crystal, the molecules form dimers through N2—H1···O2 hydrogen bonds (Table 1). It is interesting to note that the most commonly observed hydrogen bonding in sulfonamides in the studies reported by Adsmond &Grant (2001) consing of S=O···H—N chains (50 occurrences in 39 different sulfonamide structures) is absent in the title compound.
A π-π stacking interaction is observed between the benzene C4A/C5—C8/C8A rings of neighboring dimers with the centroid-to-centroid distance, Cg···Cg (1 - x, 2 - y, -z) of 3.649 (1) Å and interplanar spacing of 3.373 (1) Å (Fig. 2). The π–π stacking interaction connects the dimers along the [100] direction forming one-dimesional polymeric structure.