organic compounds
2-[4-(1H-1,2,4-Triazol-1-yl)phenyl]-1H-benzimidazole
aCollege of Chemistry and Chemical Engineering, Anhui University, Hefei 230039, People's Republic of China
*Correspondence e-mail: zhpzhp@263.net
In the title compound, C15H11N5, the benzimidazole ring system is nearly planar [maximum deviation = 0.039 (2) Å], and is oriented at a dihedral angle of 28.85 (10)° with respect to the benzene ring; the dihedral angle between the triazole and benzene rings is 17.30 (15)°. In the crystal N—H⋯N hydrogen bonds link the molecules into chains. Weak C—H⋯N interactions are also present.
Related literature
For the crystal structures of Co(II) and Pt(II) complexes with benzimidazole ligands, see: Xia et al. (2012); Qiu et al. (2011).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536812037816/xu5598sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536812037816/xu5598Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536812037816/xu5598Isup3.cml
A mixture of 4-(1H-1, 2, 4-triazol-1-yl)benzaldehyde (0.86 g, 5.0 mmol) and o-phenylenediamine (0.54 g, 5.0 mmol) was refluxed in ethanol (20 ml) over night. The yellow compound that formed was filtered, washed several times with dichloromethane and dried in air. The compound was recrystallized from methanol to give light yellow crystals. Yield: 1.08 g (83%).
All hydrogen atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms, with C—H = 0.93 and N—H = 0.86 Å and Uiso(H) = 1.2 Ueq(N,C).
The derivatives of the title compound, (I), are often used as coordinating ligands in the metal complexes (Xia et al., 2012; Qiu et al., 2011). Herewith we presenet the
of (I).In (I) (Fig.1), the imidazole ring is twisted out of the plane of benzene ring at 17.3 (1)°, the benzimidazole and benzene rings form a dihedral angle of 28.8 (1)°. In the
intermolecular N—H···N hydrogen bonds link the molecules into chains.For the crystal structures of Co(II) and Pt(II) complexes with benzimidazole ligands, see: Xia et al. (2012); Qiu et al. (2011).
Data collection: SMART (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. : The molecular structure of the title molecule(I) showing 30% probability displacement ellipsoids. | |
Fig. 2. : The H-bond diagram of the title molecule(I). |
C15H11N5 | F(000) = 1088 |
Mr = 261.29 | Dx = 1.387 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71069 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 2017 reflections |
a = 8.323 (5) Å | θ = 2.7–21.7° |
b = 10.002 (5) Å | µ = 0.09 mm−1 |
c = 30.068 (5) Å | T = 298 K |
V = 2503 (2) Å3 | Block, yellow |
Z = 8 | 0.30 × 0.20 × 0.20 mm |
Bruker SMART CCD area-detector diffractometer | 1563 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.053 |
Graphite monochromator | θmax = 25.0°, θmin = 1.4° |
phi and ω scans | h = −9→9 |
16453 measured reflections | k = −11→11 |
2194 independent reflections | l = −35→34 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.171 | H-atom parameters constrained |
S = 1.15 | w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3 |
2194 reflections | (Δ/σ)max < 0.001 |
181 parameters | Δρmax = 0.35 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C15H11N5 | V = 2503 (2) Å3 |
Mr = 261.29 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 8.323 (5) Å | µ = 0.09 mm−1 |
b = 10.002 (5) Å | T = 298 K |
c = 30.068 (5) Å | 0.30 × 0.20 × 0.20 mm |
Bruker SMART CCD area-detector diffractometer | 1563 reflections with I > 2σ(I) |
16453 measured reflections | Rint = 0.053 |
2194 independent reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.171 | H-atom parameters constrained |
S = 1.15 | Δρmax = 0.35 e Å−3 |
2194 reflections | Δρmin = −0.22 e Å−3 |
181 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.1867 (2) | 0.31253 (16) | 0.15540 (6) | 0.0393 (5) | |
N2 | 0.2336 (2) | 0.09230 (16) | 0.15838 (6) | 0.0396 (5) | |
H19 | 0.2797 | 0.0163 | 0.1544 | 0.048* | |
C8 | 0.4410 (3) | 0.2305 (2) | 0.12203 (7) | 0.0381 (6) | |
C5 | 0.0618 (3) | 0.2523 (2) | 0.17899 (7) | 0.0375 (6) | |
C6 | 0.0911 (3) | 0.1146 (2) | 0.18041 (8) | 0.0359 (6) | |
C7 | 0.2869 (3) | 0.2113 (2) | 0.14441 (8) | 0.0381 (6) | |
C1 | −0.0105 (3) | 0.0285 (2) | 0.20314 (8) | 0.0441 (6) | |
H1 | 0.0080 | −0.0632 | 0.2037 | 0.053* | |
C11 | 0.7386 (3) | 0.2637 (2) | 0.08161 (8) | 0.0427 (6) | |
N8 | 0.9995 (3) | 0.1770 (2) | 0.05945 (9) | 0.0628 (7) | |
N3 | 0.8913 (3) | 0.2799 (2) | 0.06084 (7) | 0.0490 (6) | |
C12 | 0.6162 (3) | 0.3542 (2) | 0.07322 (9) | 0.0494 (7) | |
H12 | 0.6332 | 0.4254 | 0.0539 | 0.059* | |
C4 | −0.0694 (3) | 0.3067 (2) | 0.20085 (9) | 0.0483 (7) | |
H4 | −0.0893 | 0.3982 | 0.2002 | 0.058* | |
C10 | 0.7146 (3) | 0.1580 (2) | 0.11043 (9) | 0.0524 (7) | |
H10 | 0.7977 | 0.0989 | 0.1167 | 0.063* | |
C13 | 0.4691 (3) | 0.3382 (2) | 0.09374 (9) | 0.0468 (7) | |
H13 | 0.3877 | 0.4000 | 0.0886 | 0.056* | |
C9 | 0.5654 (3) | 0.1414 (2) | 0.12971 (9) | 0.0527 (7) | |
H9 | 0.5480 | 0.0686 | 0.1483 | 0.063* | |
C2 | −0.1397 (3) | 0.0843 (2) | 0.22475 (9) | 0.0504 (7) | |
H2 | −0.2092 | 0.0293 | 0.2406 | 0.060* | |
C21 | 0.9583 (4) | 0.3865 (3) | 0.04163 (10) | 0.0667 (9) | |
H21 | 0.9075 | 0.4689 | 0.0387 | 0.080* | |
N9 | 1.1047 (3) | 0.3612 (3) | 0.02737 (10) | 0.0760 (8) | |
C20 | 1.1220 (4) | 0.2326 (3) | 0.03917 (10) | 0.0677 (9) | |
H20 | 1.2159 | 0.1854 | 0.0333 | 0.081* | |
C3 | −0.1687 (3) | 0.2213 (3) | 0.22336 (9) | 0.0525 (7) | |
H3 | −0.2578 | 0.2556 | 0.2381 | 0.063* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0388 (12) | 0.0302 (10) | 0.0490 (12) | −0.0008 (8) | 0.0043 (9) | −0.0020 (8) |
N2 | 0.0419 (12) | 0.0228 (9) | 0.0541 (13) | 0.0013 (8) | 0.0022 (10) | 0.0007 (8) |
C8 | 0.0368 (13) | 0.0322 (12) | 0.0453 (14) | −0.0017 (10) | 0.0023 (11) | −0.0011 (10) |
C5 | 0.0385 (13) | 0.0347 (12) | 0.0393 (13) | −0.0021 (10) | 0.0019 (11) | 0.0003 (10) |
C6 | 0.0377 (13) | 0.0282 (11) | 0.0416 (13) | −0.0022 (9) | −0.0020 (11) | −0.0001 (9) |
C7 | 0.0362 (14) | 0.0345 (12) | 0.0437 (14) | −0.0039 (10) | −0.0011 (11) | −0.0003 (10) |
C1 | 0.0483 (15) | 0.0321 (12) | 0.0520 (15) | −0.0048 (11) | 0.0002 (12) | 0.0038 (11) |
C11 | 0.0395 (14) | 0.0417 (13) | 0.0468 (15) | −0.0035 (11) | 0.0021 (12) | −0.0019 (11) |
N8 | 0.0485 (15) | 0.0668 (15) | 0.0729 (17) | 0.0092 (12) | 0.0085 (13) | 0.0012 (12) |
N3 | 0.0439 (13) | 0.0528 (13) | 0.0503 (13) | −0.0005 (10) | 0.0071 (10) | 0.0040 (10) |
C12 | 0.0512 (16) | 0.0397 (13) | 0.0573 (17) | −0.0023 (11) | 0.0078 (13) | 0.0093 (11) |
C4 | 0.0512 (16) | 0.0350 (13) | 0.0587 (17) | 0.0053 (11) | 0.0104 (13) | −0.0004 (11) |
C10 | 0.0428 (16) | 0.0527 (16) | 0.0617 (18) | 0.0080 (11) | 0.0041 (13) | 0.0127 (13) |
C13 | 0.0446 (15) | 0.0361 (13) | 0.0598 (17) | 0.0015 (10) | 0.0041 (13) | 0.0046 (11) |
C9 | 0.0476 (16) | 0.0476 (15) | 0.0630 (18) | 0.0006 (12) | 0.0042 (13) | 0.0164 (13) |
C2 | 0.0496 (16) | 0.0492 (15) | 0.0524 (16) | −0.0107 (12) | 0.0084 (13) | 0.0017 (12) |
C21 | 0.0587 (19) | 0.0660 (18) | 0.075 (2) | −0.0033 (15) | 0.0197 (16) | 0.0149 (16) |
N9 | 0.0561 (16) | 0.090 (2) | 0.0816 (19) | −0.0035 (14) | 0.0180 (15) | 0.0179 (15) |
C20 | 0.0483 (18) | 0.094 (2) | 0.0610 (19) | 0.0058 (16) | 0.0080 (15) | 0.0023 (17) |
C3 | 0.0483 (16) | 0.0508 (16) | 0.0585 (17) | 0.0027 (12) | 0.0148 (14) | −0.0039 (12) |
N1—C7 | 1.352 (3) | N8—N3 | 1.368 (3) |
N1—C5 | 1.395 (3) | N3—C21 | 1.335 (3) |
N2—C7 | 1.338 (3) | C12—C13 | 1.381 (3) |
N2—C6 | 1.377 (3) | C12—H12 | 0.9300 |
N2—H19 | 0.8600 | C4—C3 | 1.368 (3) |
C8—C9 | 1.386 (3) | C4—H4 | 0.9300 |
C8—C13 | 1.392 (3) | C10—C9 | 1.380 (4) |
C8—C7 | 1.461 (3) | C10—H10 | 0.9300 |
C5—C4 | 1.386 (3) | C13—H13 | 0.9300 |
C5—C6 | 1.400 (3) | C9—H9 | 0.9300 |
C6—C1 | 1.387 (3) | C2—C3 | 1.392 (4) |
C1—C2 | 1.374 (3) | C2—H2 | 0.9300 |
C1—H1 | 0.9300 | C21—N9 | 1.316 (4) |
C11—C10 | 1.382 (3) | C21—H21 | 0.9300 |
C11—C12 | 1.386 (3) | N9—C20 | 1.342 (4) |
C11—N3 | 1.425 (3) | C20—H20 | 0.9300 |
N8—C20 | 1.312 (4) | C3—H3 | 0.9300 |
C7—N1—C5 | 105.10 (18) | C13—C12—H12 | 120.2 |
C7—N2—C6 | 107.00 (17) | C11—C12—H12 | 120.2 |
C7—N2—H19 | 126.5 | C3—C4—C5 | 117.8 (2) |
C6—N2—H19 | 126.5 | C3—C4—H4 | 121.1 |
C9—C8—C13 | 118.3 (2) | C5—C4—H4 | 121.1 |
C9—C8—C7 | 119.7 (2) | C9—C10—C11 | 119.1 (2) |
C13—C8—C7 | 122.0 (2) | C9—C10—H10 | 120.5 |
C4—C5—N1 | 131.2 (2) | C11—C10—H10 | 120.5 |
C4—C5—C6 | 120.6 (2) | C12—C13—C8 | 120.8 (2) |
N1—C5—C6 | 108.1 (2) | C12—C13—H13 | 119.6 |
N2—C6—C1 | 131.5 (2) | C8—C13—H13 | 119.6 |
N2—C6—C5 | 107.15 (19) | C10—C9—C8 | 121.7 (2) |
C1—C6—C5 | 121.3 (2) | C10—C9—H9 | 119.2 |
N2—C7—N1 | 112.7 (2) | C8—C9—H9 | 119.2 |
N2—C7—C8 | 123.5 (2) | C1—C2—C3 | 121.4 (2) |
N1—C7—C8 | 123.73 (19) | C1—C2—H2 | 119.3 |
C2—C1—C6 | 117.3 (2) | C3—C2—H2 | 119.3 |
C2—C1—H1 | 121.4 | N9—C21—N3 | 111.9 (3) |
C6—C1—H1 | 121.4 | N9—C21—H21 | 124.0 |
C10—C11—C12 | 120.5 (2) | N3—C21—H21 | 124.0 |
C10—C11—N3 | 119.4 (2) | C21—N9—C20 | 101.4 (2) |
C12—C11—N3 | 120.1 (2) | N8—C20—N9 | 116.5 (3) |
C20—N8—N3 | 102.0 (2) | N8—C20—H20 | 121.8 |
C21—N3—N8 | 108.2 (2) | N9—C20—H20 | 121.8 |
C21—N3—C11 | 130.7 (2) | C4—C3—C2 | 121.7 (2) |
N8—N3—C11 | 121.0 (2) | C4—C3—H3 | 119.2 |
C13—C12—C11 | 119.6 (2) | C2—C3—H3 | 119.2 |
C7—N1—C5—C4 | 175.3 (3) | C10—C11—N3—N8 | 17.1 (4) |
C7—N1—C5—C6 | −1.2 (2) | C12—C11—N3—N8 | −163.6 (2) |
C7—N2—C6—C1 | −176.6 (3) | C10—C11—C12—C13 | −0.2 (4) |
C7—N2—C6—C5 | −0.1 (2) | N3—C11—C12—C13 | −179.6 (2) |
C4—C5—C6—N2 | −176.2 (2) | N1—C5—C4—C3 | −176.6 (2) |
N1—C5—C6—N2 | 0.8 (2) | C6—C5—C4—C3 | −0.5 (4) |
C4—C5—C6—C1 | 0.8 (4) | C12—C11—C10—C9 | 2.0 (4) |
N1—C5—C6—C1 | 177.7 (2) | N3—C11—C10—C9 | −178.7 (2) |
C6—N2—C7—N1 | −0.7 (3) | C11—C12—C13—C8 | −1.4 (4) |
C6—N2—C7—C8 | 175.9 (2) | C9—C8—C13—C12 | 1.2 (4) |
C5—N1—C7—N2 | 1.2 (3) | C7—C8—C13—C12 | 179.6 (2) |
C5—N1—C7—C8 | −175.4 (2) | C11—C10—C9—C8 | −2.2 (4) |
C9—C8—C7—N2 | −26.1 (3) | C13—C8—C9—C10 | 0.6 (4) |
C13—C8—C7—N2 | 155.5 (2) | C7—C8—C9—C10 | −177.9 (2) |
C9—C8—C7—N1 | 150.1 (2) | C6—C1—C2—C3 | 0.9 (4) |
C13—C8—C7—N1 | −28.3 (3) | N8—N3—C21—N9 | 0.1 (4) |
N2—C6—C1—C2 | 175.1 (2) | C11—N3—C21—N9 | 178.1 (3) |
C5—C6—C1—C2 | −1.0 (4) | N3—C21—N9—C20 | 0.0 (4) |
C20—N8—N3—C21 | −0.2 (3) | N3—N8—C20—N9 | 0.2 (4) |
C20—N8—N3—C11 | −178.4 (2) | C21—N9—C20—N8 | −0.1 (4) |
C10—C11—N3—C21 | −160.7 (3) | C5—C4—C3—C2 | 0.4 (4) |
C12—C11—N3—C21 | 18.7 (4) | C1—C2—C3—C4 | −0.6 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H19···N1i | 0.86 | 2.06 | 2.877 (3) | 159 |
C21—H21···N9ii | 0.93 | 2.62 | 3.309 (5) | 132 |
Symmetry codes: (i) −x+1/2, y−1/2, z; (ii) −x+2, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C15H11N5 |
Mr | 261.29 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 298 |
a, b, c (Å) | 8.323 (5), 10.002 (5), 30.068 (5) |
V (Å3) | 2503 (2) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.30 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16453, 2194, 1563 |
Rint | 0.053 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.171, 1.15 |
No. of reflections | 2194 |
No. of parameters | 181 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.35, −0.22 |
Computer programs: SMART (Bruker, 2007), SAINT (Bruker, 2007), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H19···N1i | 0.86 | 2.06 | 2.877 (3) | 159 |
C21—H21···N9ii | 0.93 | 2.62 | 3.309 (5) | 132 |
Symmetry codes: (i) −x+1/2, y−1/2, z; (ii) −x+2, −y+1, −z. |
Acknowledgements
This work was supported by a grant from the Anhui University Student Innovative Experiment Plan (KYXL20110033), the Program for New Century Excellent Talents in Universities of China, the Doctoral Program Foundation of the Ministry of Education of China (20113401110004), the 211 Project of Anhui University and the Natural Science Foundation of the Education Committee of Anhui Province, China (KJ2012A024).
References
Bruker (2007). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Qiu, D.-F., Guo, Y.-C., Wang, H.-W., Bao, X.-Y., Feng, Y.-Q. & Huang, Q.-Z. (2011). Inorg. Chem. Commun. 14, 1520–1524. Web of Science CSD CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Xia, D.-C., Ma, X.-Y., Ma, J.-X., Yao, J.-H., Yang, X.-Q. & Liu, Q.-Y. (2012). Z. Kristallogr. New Cryst. Struct. 227, 243–244. CAS Google Scholar
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The derivatives of the title compound, (I), are often used as coordinating ligands in the metal complexes (Xia et al., 2012; Qiu et al., 2011). Herewith we presenet the crystal structure of (I).
In (I) (Fig.1), the imidazole ring is twisted out of the plane of benzene ring at 17.3 (1)°, the benzimidazole and benzene rings form a dihedral angle of 28.8 (1)°. In the crystal structure, intermolecular N—H···N hydrogen bonds link the molecules into chains.