metal-organic compounds
(1H-Pyrazole-κN)bis(tri-tert-butoxysilanethiolato-κ2O,S)cadmium
aDepartment of Inorganic Chemistry, Faculty of Chemistry, Gdansk University of Technology, 11/12 G. Narutowicz St., 80233 - PL Gdańsk, Poland
*Correspondence e-mail: anndoleg@pg.gda.pl
The CdII atom in the title complex, [Cd(C12H27O3SSi)2(C3H4N2)], is penta-coordinated by two O and two S atoms from the O,S-chelating silanethiolate residue and one pyrazole N atom in a distorted geometry that is slightly closer to trigonal–bipyramidal than to square-based pyramidal. The pyrazole ligand is stabilized within the complex by an intramolecular N—H⋯O hydrogen bond. One of the tert-butyl groups is disordered over two orientations with occupancy ratio of 0.534 (6):0.466 (6).
Related literature
For similar compounds, see: Dołęga et al. (2005, 2006, 2008, 2009); Dołęga (2010). For the synthetic procedure, see: Pladzyk et al. (2011). For a description of the geometry of complexes with five-coordinate metal atoms, see: Addison et al. (1984).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SUPERFLIP (Palatinus & Chapuis, 2007); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).
Supporting information
10.1107/S1600536812047186/vn2060sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812047186/vn2060Isup2.hkl
Compound (I) was crystallized at low temperature (255 K) from toluene-methanol solution of cadmium bis(tri-tert-butoxysilanethiolate) (synthesis described in Pladzyk et al., 2011) and pyrazole.
All C–H hydrogen atoms were refined as riding on carbon atoms with methyl C–H = 0.98 Å, aromatic C–H = 0.95 Å and Uiso(H)=1.2 Ueq(C) for aromatic and 1.5 Ueq(C) for methyl groups. Atoms C10—C12 are disordered over two positions (0.534 (6)/0.466 (6)). The hydrogen atom involved in the intermolecular hydrogen bond, H2, was freely refined.
Data collection: CrysAlis PRO (Agilent, 2010); cell
CrysAlis PRO (Agilent, 2010); data reduction: CrysAlis PRO (Agilent, 2010); program(s) used to solve structure: SUPERFLIP (Palatinus & Chapuis, 2007); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).[Cd(C12H27O3SSi)2(C3H4N2)] | Z = 2 |
Mr = 739.45 | F(000) = 780 |
Triclinic, P1 | Dx = 1.29 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.4445 (4) Å | Cell parameters from 7717 reflections |
b = 12.7322 (4) Å | θ = 2.4–28.7° |
c = 16.9153 (5) Å | µ = 0.78 mm−1 |
α = 109.098 (3)° | T = 120 K |
β = 92.905 (3)° | Prism, colourless |
γ = 96.050 (3)° | 0.2 × 0.18 × 0.08 mm |
V = 1903.53 (12) Å3 |
Agilent Xcalibur Sapphire2 diffractometer | 5935 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.025 |
Detector resolution: 8.1883 pixels mm-1 | θmax = 25.5°, θmin = 2.4° |
ω scans | h = −11→9 |
11378 measured reflections | k = −15→13 |
7083 independent reflections | l = −16→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0596P)2 + 0.7954P] where P = (Fo2 + 2Fc2)/3 |
7083 reflections | (Δ/σ)max = 0.002 |
414 parameters | Δρmax = 1.11 e Å−3 |
0 restraints | Δρmin = −0.65 e Å−3 |
[Cd(C12H27O3SSi)2(C3H4N2)] | γ = 96.050 (3)° |
Mr = 739.45 | V = 1903.53 (12) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.4445 (4) Å | Mo Kα radiation |
b = 12.7322 (4) Å | µ = 0.78 mm−1 |
c = 16.9153 (5) Å | T = 120 K |
α = 109.098 (3)° | 0.2 × 0.18 × 0.08 mm |
β = 92.905 (3)° |
Agilent Xcalibur Sapphire2 diffractometer | 5935 reflections with I > 2σ(I) |
11378 measured reflections | Rint = 0.025 |
7083 independent reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 1.11 e Å−3 |
7083 reflections | Δρmin = −0.65 e Å−3 |
414 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cd1 | 0.05597 (2) | 0.985121 (18) | 0.753064 (14) | 0.02601 (9) | |
S1 | −0.17784 (8) | 0.90765 (6) | 0.77929 (5) | 0.02601 (18) | |
S2 | 0.17728 (9) | 1.12410 (7) | 0.69927 (5) | 0.03058 (19) | |
Si1 | −0.18559 (8) | 0.78496 (7) | 0.66080 (5) | 0.02040 (18) | |
Si2 | 0.24411 (9) | 1.22389 (7) | 0.82244 (5) | 0.02248 (19) | |
O1 | −0.0244 (2) | 0.80690 (17) | 0.63028 (13) | 0.0253 (5) | |
O2 | −0.3100 (2) | 0.78779 (17) | 0.59191 (13) | 0.0259 (5) | |
O3 | −0.2048 (2) | 0.65667 (17) | 0.66108 (13) | 0.0267 (5) | |
O4 | 0.1418 (2) | 1.17162 (17) | 0.88070 (12) | 0.0240 (4) | |
O5 | 0.4076 (2) | 1.21018 (17) | 0.85339 (13) | 0.0242 (5) | |
O6 | 0.2425 (2) | 1.35733 (17) | 0.84233 (14) | 0.0290 (5) | |
N1 | 0.2364 (3) | 0.9134 (2) | 0.80682 (16) | 0.0269 (6) | |
C1 | 0.0478 (4) | 0.7388 (3) | 0.5607 (2) | 0.0313 (7) | |
C2 | 0.1289 (4) | 0.8205 (3) | 0.5257 (2) | 0.0390 (8) | |
H2A | 0.0609 | 0.8563 | 0.5007 | 0.058* | |
H2B | 0.1879 | 0.7801 | 0.4828 | 0.058* | |
H2C | 0.1904 | 0.8779 | 0.5712 | 0.058* | |
C3 | −0.0607 (4) | 0.6570 (3) | 0.4925 (2) | 0.0508 (10) | |
H3A | −0.1168 | 0.6074 | 0.5164 | 0.076* | |
H3B | −0.0102 | 0.6121 | 0.4467 | 0.076* | |
H3C | −0.1246 | 0.6991 | 0.4708 | 0.076* | |
C4 | 0.1481 (5) | 0.6780 (3) | 0.5976 (3) | 0.0474 (10) | |
H4A | 0.2158 | 0.7328 | 0.6411 | 0.071* | |
H4B | 0.2008 | 0.6326 | 0.5531 | 0.071* | |
H4C | 0.0926 | 0.6292 | 0.6223 | 0.071* | |
C5 | −0.3699 (3) | 0.8759 (3) | 0.5702 (2) | 0.0301 (7) | |
C6 | −0.2526 (4) | 0.9692 (3) | 0.5720 (3) | 0.0485 (10) | |
H6A | −0.21 | 1.007 | 0.6298 | 0.073* | |
H6B | −0.2938 | 1.0236 | 0.551 | 0.073* | |
H6C | −0.1786 | 0.937 | 0.5363 | 0.073* | |
C7 | −0.4433 (4) | 0.8186 (3) | 0.4815 (2) | 0.0470 (10) | |
H7A | −0.3714 | 0.792 | 0.4424 | 0.07* | |
H7B | −0.4939 | 0.8721 | 0.4644 | 0.07* | |
H7C | −0.5118 | 0.7548 | 0.4808 | 0.07* | |
C8 | −0.4792 (4) | 0.9197 (3) | 0.6309 (2) | 0.0377 (8) | |
H8A | −0.5509 | 0.8575 | 0.6297 | 0.057* | |
H8B | −0.5262 | 0.9755 | 0.6146 | 0.057* | |
H8C | −0.4315 | 0.9544 | 0.6878 | 0.057* | |
C9 | −0.3262 (4) | 0.5875 (3) | 0.6738 (2) | 0.0329 (8) | |
C10 | −0.4222 (8) | 0.6548 (6) | 0.7331 (5) | 0.043 (2) | 0.534 (6) |
H10A | −0.371 | 0.6883 | 0.7892 | 0.064* | 0.534 (6) |
H10B | −0.5076 | 0.6057 | 0.7359 | 0.064* | 0.534 (6) |
H10C | −0.4505 | 0.7142 | 0.7131 | 0.064* | 0.534 (6) |
C11 | −0.4105 (8) | 0.5393 (5) | 0.5828 (4) | 0.0407 (19) | 0.534 (6) |
H11A | −0.436 | 0.6015 | 0.5653 | 0.061* | 0.534 (6) |
H11B | −0.4977 | 0.4911 | 0.5844 | 0.061* | 0.534 (6) |
H11C | −0.3497 | 0.4954 | 0.5427 | 0.061* | 0.534 (6) |
C12 | −0.2692 (10) | 0.4985 (7) | 0.6966 (7) | 0.068 (3) | 0.534 (6) |
H12A | −0.2071 | 0.4613 | 0.6543 | 0.101* | 0.534 (6) |
H12B | −0.3482 | 0.4437 | 0.6994 | 0.101* | 0.534 (6) |
H12C | −0.2139 | 0.5304 | 0.7515 | 0.101* | 0.534 (6) |
C10A | −0.4682 (8) | 0.6233 (7) | 0.6616 (5) | 0.042 (2) | 0.466 (6) |
H10D | −0.4641 | 0.704 | 0.6911 | 0.064* | 0.466 (6) |
H10E | −0.5403 | 0.5825 | 0.6842 | 0.064* | 0.466 (6) |
H10F | −0.4938 | 0.6069 | 0.6015 | 0.064* | 0.466 (6) |
C11A | −0.3166 (11) | 0.4659 (6) | 0.6230 (5) | 0.047 (2) | 0.466 (6) |
H11D | −0.333 | 0.4547 | 0.563 | 0.07* | 0.466 (6) |
H11E | −0.3891 | 0.4171 | 0.6386 | 0.07* | 0.466 (6) |
H11F | −0.2214 | 0.4475 | 0.6348 | 0.07* | 0.466 (6) |
C12A | −0.3010 (10) | 0.5984 (6) | 0.7706 (4) | 0.041 (2) | 0.466 (6) |
H12D | −0.2174 | 0.5623 | 0.7787 | 0.062* | 0.466 (6) |
H12E | −0.3856 | 0.5617 | 0.7869 | 0.062* | 0.466 (6) |
H12F | −0.2847 | 0.6778 | 0.8053 | 0.062* | 0.466 (6) |
C13 | 0.1443 (4) | 1.1983 (3) | 0.97162 (19) | 0.0288 (7) | |
C14 | 0.2531 (4) | 1.1374 (3) | 1.0014 (2) | 0.0401 (9) | |
H14A | 0.2298 | 1.0565 | 0.9723 | 0.06* | |
H14B | 0.2515 | 1.1535 | 1.0621 | 0.06* | |
H14C | 0.3486 | 1.1627 | 0.9892 | 0.06* | |
C15 | 0.1815 (6) | 1.3247 (3) | 1.0166 (2) | 0.0560 (12) | |
H15A | 0.179 | 1.3414 | 1.0773 | 0.084* | |
H15B | 0.1119 | 1.3643 | 0.9966 | 0.084* | |
H15C | 0.2775 | 1.3492 | 1.0047 | 0.084* | |
C16 | −0.0053 (4) | 1.1580 (4) | 0.9872 (2) | 0.0496 (10) | |
H16A | −0.0314 | 1.0791 | 0.9525 | 0.074* | |
H16B | −0.0733 | 1.2032 | 0.9725 | 0.074* | |
H16C | −0.0078 | 1.1656 | 1.0467 | 0.074* | |
C17 | 0.5467 (3) | 1.2632 (3) | 0.8437 (2) | 0.0283 (7) | |
C18 | 0.6535 (4) | 1.1934 (3) | 0.8649 (3) | 0.0432 (9) | |
H18A | 0.6378 | 1.1176 | 0.8236 | 0.065* | |
H18B | 0.641 | 1.1896 | 0.9211 | 0.065* | |
H18C | 0.7508 | 1.2279 | 0.8637 | 0.065* | |
C19 | 0.5714 (4) | 1.3828 (3) | 0.9049 (3) | 0.0458 (9) | |
H19A | 0.6643 | 1.4194 | 0.8979 | 0.069* | |
H19B | 0.5704 | 1.3817 | 0.9625 | 0.069* | |
H19C | 0.4956 | 1.4242 | 0.8936 | 0.069* | |
C20 | 0.5536 (4) | 1.2608 (3) | 0.7534 (2) | 0.0412 (9) | |
H20A | 0.5294 | 1.1836 | 0.7151 | 0.062* | |
H20B | 0.6505 | 1.2899 | 0.7459 | 0.062* | |
H20C | 0.4854 | 1.3076 | 0.7411 | 0.062* | |
C21 | 0.1447 (4) | 1.4231 (3) | 0.8169 (3) | 0.0405 (9) | |
C22 | 0.1711 (5) | 1.5389 (3) | 0.8845 (3) | 0.0542 (11) | |
H22A | 0.1517 | 1.532 | 0.9391 | 0.081* | |
H22B | 0.1077 | 1.5879 | 0.8709 | 0.081* | |
H22C | 0.2709 | 1.5709 | 0.8869 | 0.081* | |
C23 | 0.1803 (6) | 1.4289 (4) | 0.7328 (3) | 0.0647 (13) | |
H23A | 0.2823 | 1.4555 | 0.7355 | 0.097* | |
H23B | 0.1235 | 1.4809 | 0.7178 | 0.097* | |
H23C | 0.1584 | 1.3542 | 0.6903 | 0.097* | |
C24 | −0.0101 (4) | 1.3714 (4) | 0.8152 (4) | 0.0636 (14) | |
H24A | −0.0282 | 1.2984 | 0.7704 | 0.095* | |
H24B | −0.0756 | 1.4211 | 0.8047 | 0.095* | |
H24C | −0.0253 | 1.3615 | 0.8693 | 0.095* | |
N2 | 0.3708 (3) | 0.9677 (2) | 0.82922 (17) | 0.0279 (6) | |
C25 | 0.2363 (4) | 0.8215 (3) | 0.8284 (2) | 0.0345 (8) | |
H25 | 0.1562 | 0.7658 | 0.8195 | 0.041* | |
C27 | 0.4531 (4) | 0.9137 (3) | 0.8654 (2) | 0.0371 (8) | |
H27 | 0.5506 | 0.9367 | 0.8866 | 0.045* | |
C26 | 0.3699 (4) | 0.8187 (3) | 0.8660 (2) | 0.0433 (9) | |
H26 | 0.3976 | 0.763 | 0.8875 | 0.052* | |
H2 | 0.386 (5) | 1.033 (3) | 0.828 (2) | 0.049 (12)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.02004 (13) | 0.02765 (14) | 0.03054 (14) | −0.00224 (9) | −0.00191 (9) | 0.01224 (10) |
S1 | 0.0216 (4) | 0.0287 (4) | 0.0268 (4) | 0.0005 (3) | 0.0043 (3) | 0.0086 (3) |
S2 | 0.0315 (4) | 0.0341 (4) | 0.0266 (4) | −0.0069 (4) | −0.0033 (3) | 0.0150 (3) |
Si1 | 0.0154 (4) | 0.0220 (4) | 0.0259 (4) | 0.0007 (3) | 0.0014 (3) | 0.0115 (3) |
Si2 | 0.0189 (4) | 0.0235 (4) | 0.0275 (4) | −0.0002 (3) | −0.0005 (3) | 0.0131 (4) |
O1 | 0.0174 (11) | 0.0269 (11) | 0.0283 (11) | 0.0002 (9) | 0.0038 (9) | 0.0056 (9) |
O2 | 0.0240 (11) | 0.0239 (11) | 0.0323 (11) | 0.0006 (9) | −0.0039 (9) | 0.0146 (9) |
O3 | 0.0234 (11) | 0.0243 (11) | 0.0370 (12) | 0.0017 (9) | 0.0011 (9) | 0.0169 (10) |
O4 | 0.0195 (11) | 0.0291 (11) | 0.0258 (11) | 0.0003 (9) | 0.0018 (9) | 0.0135 (9) |
O5 | 0.0178 (11) | 0.0269 (11) | 0.0314 (11) | 0.0009 (9) | 0.0009 (9) | 0.0153 (9) |
O6 | 0.0236 (12) | 0.0274 (11) | 0.0406 (13) | 0.0015 (9) | 0.0004 (10) | 0.0183 (10) |
N1 | 0.0236 (14) | 0.0262 (13) | 0.0309 (14) | 0.0003 (11) | 0.0002 (11) | 0.0107 (11) |
C1 | 0.0248 (17) | 0.0340 (17) | 0.0304 (17) | 0.0031 (14) | 0.0074 (14) | 0.0042 (14) |
C2 | 0.035 (2) | 0.047 (2) | 0.0370 (19) | 0.0085 (17) | 0.0141 (16) | 0.0142 (17) |
C3 | 0.038 (2) | 0.054 (2) | 0.041 (2) | −0.0061 (19) | 0.0101 (17) | −0.0090 (18) |
C4 | 0.053 (3) | 0.039 (2) | 0.052 (2) | 0.0215 (19) | 0.0159 (19) | 0.0106 (18) |
C5 | 0.0244 (17) | 0.0327 (17) | 0.0406 (19) | 0.0054 (14) | −0.0014 (14) | 0.0225 (15) |
C6 | 0.032 (2) | 0.048 (2) | 0.086 (3) | 0.0041 (17) | 0.001 (2) | 0.051 (2) |
C7 | 0.047 (2) | 0.060 (2) | 0.041 (2) | 0.018 (2) | −0.0084 (18) | 0.0253 (19) |
C8 | 0.0254 (18) | 0.0387 (19) | 0.051 (2) | 0.0081 (15) | −0.0032 (16) | 0.0174 (17) |
C9 | 0.0361 (19) | 0.0244 (16) | 0.0384 (19) | −0.0038 (14) | 0.0042 (15) | 0.0131 (15) |
C10 | 0.040 (4) | 0.042 (4) | 0.045 (5) | −0.013 (3) | 0.011 (3) | 0.018 (3) |
C11 | 0.034 (4) | 0.031 (3) | 0.049 (4) | −0.014 (3) | −0.001 (3) | 0.008 (3) |
C12 | 0.071 (6) | 0.047 (5) | 0.109 (9) | 0.010 (4) | 0.012 (6) | 0.058 (6) |
C10A | 0.034 (4) | 0.048 (5) | 0.050 (5) | −0.012 (4) | 0.009 (4) | 0.027 (4) |
C11A | 0.084 (7) | 0.025 (4) | 0.025 (4) | −0.005 (4) | 0.011 (4) | 0.002 (3) |
C12A | 0.078 (6) | 0.022 (4) | 0.022 (4) | −0.002 (4) | −0.002 (4) | 0.009 (3) |
C13 | 0.0302 (18) | 0.0324 (17) | 0.0252 (16) | 0.0038 (14) | 0.0044 (13) | 0.0114 (14) |
C14 | 0.041 (2) | 0.059 (2) | 0.0245 (17) | 0.0125 (18) | 0.0010 (15) | 0.0170 (17) |
C15 | 0.090 (4) | 0.036 (2) | 0.038 (2) | 0.009 (2) | 0.017 (2) | 0.0053 (18) |
C16 | 0.033 (2) | 0.082 (3) | 0.039 (2) | 0.000 (2) | 0.0078 (17) | 0.030 (2) |
C17 | 0.0173 (15) | 0.0312 (17) | 0.0366 (18) | −0.0024 (13) | −0.0003 (13) | 0.0139 (14) |
C18 | 0.0218 (18) | 0.044 (2) | 0.069 (3) | 0.0003 (16) | −0.0036 (17) | 0.029 (2) |
C19 | 0.030 (2) | 0.038 (2) | 0.058 (2) | −0.0063 (16) | −0.0026 (18) | 0.0054 (18) |
C20 | 0.0273 (19) | 0.057 (2) | 0.043 (2) | −0.0030 (17) | 0.0040 (16) | 0.0228 (18) |
C21 | 0.034 (2) | 0.0340 (18) | 0.062 (2) | 0.0080 (16) | −0.0054 (17) | 0.0276 (18) |
C22 | 0.053 (3) | 0.0282 (19) | 0.086 (3) | 0.0116 (18) | 0.002 (2) | 0.024 (2) |
C23 | 0.077 (3) | 0.063 (3) | 0.070 (3) | 0.009 (3) | −0.009 (3) | 0.047 (3) |
C24 | 0.027 (2) | 0.049 (2) | 0.124 (4) | 0.0074 (19) | −0.006 (2) | 0.042 (3) |
N2 | 0.0213 (14) | 0.0289 (14) | 0.0368 (15) | 0.0008 (12) | −0.0002 (11) | 0.0165 (13) |
C25 | 0.0345 (19) | 0.0308 (17) | 0.043 (2) | −0.0001 (15) | 0.0046 (16) | 0.0198 (16) |
C27 | 0.0251 (18) | 0.045 (2) | 0.048 (2) | 0.0105 (16) | −0.0010 (15) | 0.0238 (17) |
C26 | 0.043 (2) | 0.040 (2) | 0.061 (2) | 0.0089 (17) | 0.0015 (18) | 0.0344 (19) |
Cd1—N1 | 2.298 (3) | C11—H11C | 0.98 |
Cd1—O1 | 2.536 (2) | C12—H12A | 0.98 |
Cd1—O4 | 2.649 (2) | C12—H12B | 0.98 |
Cd1—S1 | 2.4438 (8) | C12—H12C | 0.98 |
Cd1—S2 | 2.4503 (8) | C10A—H10D | 0.98 |
Cd1—Si1 | 3.1538 (8) | C10A—H10E | 0.98 |
Si1—S1 | 2.0917 (11) | C10A—H10F | 0.98 |
Si2—S2 | 2.0781 (12) | C11A—H11D | 0.98 |
Si1—O2 | 1.624 (2) | C11A—H11E | 0.98 |
Si1—O3 | 1.626 (2) | C11A—H11F | 0.98 |
Si1—O1 | 1.658 (2) | C12A—H12D | 0.98 |
Si2—O6 | 1.622 (2) | C12A—H12E | 0.98 |
Si2—O5 | 1.650 (2) | C12A—H12F | 0.98 |
Si2—O4 | 1.655 (2) | C13—C14 | 1.511 (5) |
O1—C1 | 1.463 (4) | C13—C16 | 1.517 (5) |
O2—C5 | 1.448 (4) | C13—C15 | 1.530 (5) |
O3—C9 | 1.439 (4) | C14—H14A | 0.98 |
O4—C13 | 1.461 (4) | C14—H14B | 0.98 |
O5—C17 | 1.455 (4) | C14—H14C | 0.98 |
O6—C21 | 1.448 (4) | C15—H15A | 0.98 |
N1—C25 | 1.335 (4) | C15—H15B | 0.98 |
N1—N2 | 1.352 (4) | C15—H15C | 0.98 |
C1—C2 | 1.516 (5) | C16—H16A | 0.98 |
C1—C4 | 1.516 (5) | C16—H16B | 0.98 |
C1—C3 | 1.528 (5) | C16—H16C | 0.98 |
C2—H2A | 0.98 | C17—C18 | 1.516 (5) |
C2—H2B | 0.98 | C17—C19 | 1.521 (5) |
C2—H2C | 0.98 | C17—C20 | 1.522 (5) |
C3—H3A | 0.98 | C18—H18A | 0.98 |
C3—H3B | 0.98 | C18—H18B | 0.98 |
C3—H3C | 0.98 | C18—H18C | 0.98 |
C4—H4A | 0.98 | C19—H19A | 0.98 |
C4—H4B | 0.98 | C19—H19B | 0.98 |
C4—H4C | 0.98 | C19—H19C | 0.98 |
C5—C8 | 1.513 (5) | C20—H20A | 0.98 |
C5—C7 | 1.528 (5) | C20—H20B | 0.98 |
C5—C6 | 1.528 (5) | C20—H20C | 0.98 |
C6—H6A | 0.98 | C21—C23 | 1.502 (6) |
C6—H6B | 0.98 | C21—C22 | 1.528 (5) |
C6—H6C | 0.98 | C21—C24 | 1.533 (5) |
C7—H7A | 0.98 | C22—H22A | 0.98 |
C7—H7B | 0.98 | C22—H22B | 0.98 |
C7—H7C | 0.98 | C22—H22C | 0.98 |
C8—H8A | 0.98 | C23—H23A | 0.98 |
C8—H8B | 0.98 | C23—H23B | 0.98 |
C8—H8C | 0.98 | C23—H23C | 0.98 |
C9—C12 | 1.456 (8) | C24—H24A | 0.98 |
C9—C10A | 1.486 (9) | C24—H24B | 0.98 |
C9—C10 | 1.502 (8) | C24—H24C | 0.98 |
C9—C11A | 1.520 (8) | N2—C27 | 1.338 (4) |
C9—C11 | 1.591 (7) | N2—H2 | 0.83 (4) |
C9—C12A | 1.601 (7) | C25—C26 | 1.393 (5) |
C10—H10A | 0.98 | C25—H25 | 0.95 |
C10—H10B | 0.98 | C27—C26 | 1.375 (5) |
C10—H10C | 0.98 | C27—H27 | 0.95 |
C11—H11A | 0.98 | C26—H26 | 0.95 |
C11—H11B | 0.98 | ||
N1—Cd1—O1 | 94.98 (8) | C11A—C9—C12A | 106.4 (5) |
N1—Cd1—O4 | 84.89 (8) | C11—C9—C12A | 153.7 (4) |
N1—Cd1—S1 | 110.92 (7) | C9—C10—H10A | 109.5 |
N1—Cd1—S2 | 105.14 (7) | C9—C10—H10B | 109.5 |
O1—Cd1—O4 | 179.52 (6) | C9—C10—H10C | 109.5 |
S1—Cd1—O1 | 72.84 (5) | C9—C11—H11A | 109.5 |
S1—Cd1—O4 | 107.64 (5) | C9—C11—H11B | 109.5 |
S2—Cd1—O1 | 108.45 (5) | C9—C11—H11C | 109.5 |
S2—Cd1—O4 | 71.15 (5) | C9—C12—H12A | 109.5 |
S1—Cd1—S2 | 143.70 (3) | C9—C12—H12B | 109.5 |
N1—Cd1—Si1 | 107.76 (7) | C9—C12—H12C | 109.5 |
S1—Cd1—Si1 | 41.51 (2) | C9—C10A—H10D | 109.5 |
S2—Cd1—Si1 | 128.78 (2) | C9—C10A—H10E | 109.5 |
O1—Cd1—Si1 | 31.56 (5) | H10D—C10A—H10E | 109.5 |
O4—Cd1—Si1 | 148.91 (5) | C9—C10A—H10F | 109.5 |
Si1—S1—Cd1 | 87.75 (3) | H10D—C10A—H10F | 109.5 |
Si2—S2—Cd1 | 88.70 (4) | H10E—C10A—H10F | 109.5 |
O2—Si1—O3 | 105.07 (11) | C9—C11A—H11D | 109.5 |
O2—Si1—O1 | 111.27 (11) | C9—C11A—H11E | 109.5 |
O3—Si1—O1 | 106.14 (11) | H11D—C11A—H11E | 109.5 |
O2—Si1—S1 | 115.77 (9) | C9—C11A—H11F | 109.5 |
O3—Si1—S1 | 114.79 (9) | H11D—C11A—H11F | 109.5 |
O1—Si1—S1 | 103.54 (8) | H11E—C11A—H11F | 109.5 |
O2—Si1—Cd1 | 124.75 (8) | C9—C12A—H12D | 109.5 |
O3—Si1—Cd1 | 129.82 (8) | C9—C12A—H12E | 109.5 |
O1—Si1—Cd1 | 53.20 (7) | H12D—C12A—H12E | 109.5 |
S1—Si1—Cd1 | 50.74 (3) | C9—C12A—H12F | 109.5 |
O6—Si2—O5 | 105.57 (11) | H12D—C12A—H12F | 109.5 |
O6—Si2—O4 | 113.49 (12) | H12E—C12A—H12F | 109.5 |
O5—Si2—O4 | 103.78 (11) | O4—C13—C14 | 110.0 (3) |
O6—Si2—S2 | 115.13 (9) | O4—C13—C16 | 105.4 (3) |
O5—Si2—S2 | 113.55 (9) | C14—C13—C16 | 110.6 (3) |
O4—Si2—S2 | 104.93 (8) | O4—C13—C15 | 110.6 (3) |
C1—O1—Si1 | 131.05 (19) | C14—C13—C15 | 109.4 (3) |
C1—O1—Cd1 | 133.45 (17) | C16—C13—C15 | 110.8 (3) |
Si1—O1—Cd1 | 95.24 (9) | C13—C14—H14A | 109.5 |
C5—O2—Si1 | 134.6 (2) | C13—C14—H14B | 109.5 |
C9—O3—Si1 | 131.5 (2) | H14A—C14—H14B | 109.5 |
C13—O4—Si2 | 131.51 (19) | C13—C14—H14C | 109.5 |
C13—O4—Cd1 | 132.44 (17) | H14A—C14—H14C | 109.5 |
Si2—O4—Cd1 | 92.19 (9) | H14B—C14—H14C | 109.5 |
C17—O5—Si2 | 131.52 (18) | C13—C15—H15A | 109.5 |
C21—O6—Si2 | 133.6 (2) | C13—C15—H15B | 109.5 |
C25—N1—N2 | 105.3 (3) | H15A—C15—H15B | 109.5 |
C25—N1—Cd1 | 131.5 (2) | C13—C15—H15C | 109.5 |
N2—N1—Cd1 | 122.98 (19) | H15A—C15—H15C | 109.5 |
O1—C1—C2 | 106.0 (3) | H15B—C15—H15C | 109.5 |
O1—C1—C4 | 106.7 (3) | C13—C16—H16A | 109.5 |
C2—C1—C4 | 111.6 (3) | C13—C16—H16B | 109.5 |
O1—C1—C3 | 110.8 (3) | H16A—C16—H16B | 109.5 |
C2—C1—C3 | 109.8 (3) | C13—C16—H16C | 109.5 |
C4—C1—C3 | 111.7 (3) | H16A—C16—H16C | 109.5 |
C1—C2—H2A | 109.5 | H16B—C16—H16C | 109.5 |
C1—C2—H2B | 109.5 | O5—C17—C18 | 105.1 (2) |
H2A—C2—H2B | 109.5 | O5—C17—C19 | 109.1 (3) |
C1—C2—H2C | 109.5 | C18—C17—C19 | 110.9 (3) |
H2A—C2—H2C | 109.5 | O5—C17—C20 | 109.9 (3) |
H2B—C2—H2C | 109.5 | C18—C17—C20 | 110.6 (3) |
C1—C3—H3A | 109.5 | C19—C17—C20 | 111.2 (3) |
C1—C3—H3B | 109.5 | C17—C18—H18A | 109.5 |
H3A—C3—H3B | 109.5 | C17—C18—H18B | 109.5 |
C1—C3—H3C | 109.5 | H18A—C18—H18B | 109.5 |
H3A—C3—H3C | 109.5 | C17—C18—H18C | 109.5 |
H3B—C3—H3C | 109.5 | H18A—C18—H18C | 109.5 |
C1—C4—H4A | 109.5 | H18B—C18—H18C | 109.5 |
C1—C4—H4B | 109.5 | C17—C19—H19A | 109.5 |
H4A—C4—H4B | 109.5 | C17—C19—H19B | 109.5 |
C1—C4—H4C | 109.5 | H19A—C19—H19B | 109.5 |
H4A—C4—H4C | 109.5 | C17—C19—H19C | 109.5 |
H4B—C4—H4C | 109.5 | H19A—C19—H19C | 109.5 |
O2—C5—C8 | 108.3 (3) | H19B—C19—H19C | 109.5 |
O2—C5—C7 | 104.9 (3) | C17—C20—H20A | 109.5 |
C8—C5—C7 | 110.1 (3) | C17—C20—H20B | 109.5 |
O2—C5—C6 | 110.9 (3) | H20A—C20—H20B | 109.5 |
C8—C5—C6 | 111.5 (3) | C17—C20—H20C | 109.5 |
C7—C5—C6 | 110.9 (3) | H20A—C20—H20C | 109.5 |
C5—C6—H6A | 109.5 | H20B—C20—H20C | 109.5 |
C5—C6—H6B | 109.5 | O6—C21—C23 | 108.3 (3) |
H6A—C6—H6B | 109.5 | O6—C21—C22 | 105.4 (3) |
C5—C6—H6C | 109.5 | C23—C21—C22 | 111.2 (3) |
H6A—C6—H6C | 109.5 | O6—C21—C24 | 110.0 (3) |
H6B—C6—H6C | 109.5 | C23—C21—C24 | 112.3 (4) |
C5—C7—H7A | 109.5 | C22—C21—C24 | 109.4 (4) |
C5—C7—H7B | 109.5 | C21—C22—H22A | 109.5 |
H7A—C7—H7B | 109.5 | C21—C22—H22B | 109.5 |
C5—C7—H7C | 109.5 | H22A—C22—H22B | 109.5 |
H7A—C7—H7C | 109.5 | C21—C22—H22C | 109.5 |
H7B—C7—H7C | 109.5 | H22A—C22—H22C | 109.5 |
C5—C8—H8A | 109.5 | H22B—C22—H22C | 109.5 |
C5—C8—H8B | 109.5 | C21—C23—H23A | 109.5 |
H8A—C8—H8B | 109.5 | C21—C23—H23B | 109.5 |
C5—C8—H8C | 109.5 | H23A—C23—H23B | 109.5 |
H8A—C8—H8C | 109.5 | C21—C23—H23C | 109.5 |
H8B—C8—H8C | 109.5 | H23A—C23—H23C | 109.5 |
O3—C9—C12 | 106.2 (5) | H23B—C23—H23C | 109.5 |
O3—C9—C10A | 115.9 (4) | C21—C24—H24A | 109.5 |
C12—C9—C10A | 137.9 (5) | C21—C24—H24B | 109.5 |
O3—C9—C10 | 112.2 (3) | H24A—C24—H24B | 109.5 |
C12—C9—C10 | 116.4 (6) | C21—C24—H24C | 109.5 |
C10A—C9—C10 | 46.8 (4) | H24A—C24—H24C | 109.5 |
O3—C9—C11A | 108.8 (4) | H24B—C24—H24C | 109.5 |
C12—C9—C11A | 48.3 (5) | C27—N2—N1 | 111.8 (3) |
C10A—C9—C11A | 113.7 (6) | C27—N2—H2 | 129 (3) |
C10—C9—C11A | 138.9 (5) | N1—N2—H2 | 118 (3) |
O3—C9—C11 | 102.5 (3) | N1—C25—C26 | 110.5 (3) |
C12—C9—C11 | 110.8 (6) | N1—C25—H25 | 124.7 |
C10A—C9—C11 | 61.5 (5) | C26—C25—H25 | 124.7 |
C10—C9—C11 | 107.9 (5) | N2—C27—C26 | 107.0 (3) |
C11A—C9—C11 | 63.1 (5) | N2—C27—H27 | 126.5 |
O3—C9—C12A | 103.8 (4) | C26—C27—H27 | 126.5 |
C12—C9—C12A | 60.0 (5) | C27—C26—C25 | 105.4 (3) |
C10A—C9—C12A | 107.2 (5) | C27—C26—H26 | 127.3 |
C10—C9—C12A | 62.8 (5) | C25—C26—H26 | 127.3 |
N1—Cd1—S1—Si1 | −93.48 (8) | S2—Si2—O4—Cd1 | 14.63 (8) |
S2—Cd1—S1—Si1 | 93.33 (5) | N1—Cd1—O4—C13 | −63.7 (2) |
O1—Cd1—S1—Si1 | −4.67 (6) | S1—Cd1—O4—C13 | 46.6 (2) |
O4—Cd1—S1—Si1 | 175.29 (5) | S2—Cd1—O4—C13 | −171.7 (2) |
N1—Cd1—S2—Si2 | −69.02 (8) | Si1—Cd1—O4—C13 | 52.7 (3) |
S1—Cd1—S2—Si2 | 104.39 (5) | N1—Cd1—O4—Si2 | 95.28 (10) |
O1—Cd1—S2—Si2 | −169.69 (6) | S1—Cd1—O4—Si2 | −154.37 (7) |
O4—Cd1—S2—Si2 | 10.03 (5) | S2—Cd1—O4—Si2 | −12.64 (7) |
Si1—Cd1—S2—Si2 | 162.46 (3) | Si1—Cd1—O4—Si2 | −148.32 (6) |
Cd1—S1—Si1—O2 | −115.01 (9) | O6—Si2—O5—C17 | −42.6 (3) |
Cd1—S1—Si1—O3 | 122.25 (9) | O4—Si2—O5—C17 | −162.3 (2) |
Cd1—S1—Si1—O1 | 7.03 (8) | S2—Si2—O5—C17 | 84.4 (3) |
N1—Cd1—Si1—O2 | −161.55 (12) | O5—Si2—O6—C21 | 166.1 (3) |
S1—Cd1—Si1—O2 | 96.68 (11) | O4—Si2—O6—C21 | −80.9 (3) |
S2—Cd1—Si1—O2 | −34.02 (11) | S2—Si2—O6—C21 | 40.1 (3) |
O1—Cd1—Si1—O2 | −91.86 (14) | S1—Cd1—N1—C25 | 19.6 (3) |
O4—Cd1—Si1—O2 | 87.97 (14) | S2—Cd1—N1—C25 | −164.6 (3) |
N1—Cd1—Si1—O3 | 10.42 (13) | O1—Cd1—N1—C25 | −53.9 (3) |
S1—Cd1—Si1—O3 | −91.35 (12) | O4—Cd1—N1—C25 | 126.6 (3) |
S2—Cd1—Si1—O3 | 137.95 (11) | Si1—Cd1—N1—C25 | −24.4 (3) |
O1—Cd1—Si1—O3 | 80.11 (14) | S1—Cd1—N1—N2 | −155.0 (2) |
O4—Cd1—Si1—O3 | −100.06 (14) | S2—Cd1—N1—N2 | 20.8 (2) |
N1—Cd1—Si1—O1 | −69.69 (11) | O1—Cd1—N1—N2 | 131.5 (2) |
S1—Cd1—Si1—O1 | −171.46 (10) | O4—Cd1—N1—N2 | −48.0 (2) |
S2—Cd1—Si1—O1 | 57.84 (10) | Si1—Cd1—N1—N2 | 161.0 (2) |
O4—Cd1—Si1—O1 | 179.83 (12) | Si1—O1—C1—C2 | 140.9 (2) |
N1—Cd1—Si1—S1 | 101.77 (8) | Cd1—O1—C1—C2 | −46.4 (4) |
S2—Cd1—Si1—S1 | −130.70 (4) | Si1—O1—C1—C4 | −100.0 (3) |
O1—Cd1—Si1—S1 | 171.46 (10) | Cd1—O1—C1—C4 | 72.8 (3) |
O4—Cd1—Si1—S1 | −8.71 (10) | Si1—O1—C1—C3 | 21.8 (4) |
Cd1—S2—Si2—O6 | −141.34 (10) | Cd1—O1—C1—C3 | −165.5 (2) |
Cd1—S2—Si2—O5 | 96.80 (9) | Si1—O2—C5—C8 | −82.0 (3) |
Cd1—S2—Si2—O4 | −15.84 (9) | Si1—O2—C5—C7 | 160.5 (3) |
O2—Si1—O1—C1 | −67.1 (3) | Si1—O2—C5—C6 | 40.7 (4) |
O3—Si1—O1—C1 | 46.7 (3) | Si1—O3—C9—C12 | −160.2 (5) |
S1—Si1—O1—C1 | 167.9 (2) | Si1—O3—C9—C10A | 19.4 (6) |
Cd1—Si1—O1—C1 | 174.7 (3) | Si1—O3—C9—C10 | −32.0 (5) |
O2—Si1—O1—Cd1 | 118.20 (10) | Si1—O3—C9—C11A | 149.0 (4) |
O3—Si1—O1—Cd1 | −128.03 (10) | Si1—O3—C9—C11 | 83.5 (4) |
S1—Si1—O1—Cd1 | −6.79 (8) | Si1—O3—C9—C12A | −97.9 (4) |
N1—Cd1—O1—C1 | −58.2 (3) | Si2—O4—C13—C14 | −82.8 (3) |
S1—Cd1—O1—C1 | −168.6 (3) | Cd1—O4—C13—C14 | 68.6 (3) |
S2—Cd1—O1—C1 | 49.6 (2) | Si2—O4—C13—C16 | 158.0 (2) |
Si1—Cd1—O1—C1 | −174.5 (3) | Cd1—O4—C13—C16 | −50.6 (3) |
N1—Cd1—O1—Si1 | 116.29 (10) | Si2—O4—C13—C15 | 38.2 (4) |
S1—Cd1—O1—Si1 | 5.91 (7) | Cd1—O4—C13—C15 | −170.4 (2) |
S2—Cd1—O1—Si1 | −135.92 (7) | Si2—O5—C17—C18 | −165.4 (2) |
O3—Si1—O2—C5 | 167.4 (3) | Si2—O5—C17—C19 | 75.7 (3) |
O1—Si1—O2—C5 | −78.2 (3) | Si2—O5—C17—C20 | −46.4 (4) |
S1—Si1—O2—C5 | 39.7 (3) | Si2—O6—C21—C23 | −84.2 (4) |
Cd1—Si1—O2—C5 | −19.0 (3) | Si2—O6—C21—C22 | 156.7 (3) |
O2—Si1—O3—C9 | −55.0 (3) | Si2—O6—C21—C24 | 38.8 (5) |
O1—Si1—O3—C9 | −172.9 (3) | C25—N1—N2—C27 | −1.2 (4) |
S1—Si1—O3—C9 | 73.4 (3) | Cd1—N1—N2—C27 | 174.6 (2) |
Cd1—Si1—O3—C9 | 131.9 (2) | N2—N1—C25—C26 | 1.1 (4) |
O6—Si2—O4—C13 | −59.5 (3) | Cd1—N1—C25—C26 | −174.2 (2) |
O5—Si2—O4—C13 | 54.6 (3) | N1—N2—C27—C26 | 0.8 (4) |
S2—Si2—O4—C13 | 174.0 (2) | N2—C27—C26—C25 | −0.1 (4) |
O6—Si2—O4—Cd1 | 141.15 (10) | N1—C25—C26—C27 | −0.7 (4) |
O5—Si2—O4—Cd1 | −104.78 (9) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O5 | 0.83 (4) | 2.14 (4) | 2.959 (3) | 167 (4) |
Experimental details
Crystal data | |
Chemical formula | [Cd(C12H27O3SSi)2(C3H4N2)] |
Mr | 739.45 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 120 |
a, b, c (Å) | 9.4445 (4), 12.7322 (4), 16.9153 (5) |
α, β, γ (°) | 109.098 (3), 92.905 (3), 96.050 (3) |
V (Å3) | 1903.53 (12) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.78 |
Crystal size (mm) | 0.2 × 0.18 × 0.08 |
Data collection | |
Diffractometer | Agilent Xcalibur Sapphire2 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11378, 7083, 5935 |
Rint | 0.025 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.103, 1.06 |
No. of reflections | 7083 |
No. of parameters | 414 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.11, −0.65 |
Computer programs: CrysAlis PRO (Agilent, 2010), SUPERFLIP (Palatinus & Chapuis, 2007), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), WinGX (Farrugia, 2012).
Cd1—N1 | 2.298 (3) | Cd1—S2 | 2.4503 (8) |
Cd1—O1 | 2.536 (2) | Si1—S1 | 2.0917 (11) |
Cd1—O4 | 2.649 (2) | Si2—S2 | 2.0781 (12) |
Cd1—S1 | 2.4438 (8) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O5 | 0.83 (4) | 2.14 (4) | 2.959 (3) | 167 (4) |
References
Addison, A. W., Rao, T. N., Reedijk, J., van Rijn, J. & Verschoor, G. C. (1984). J. Chem. Soc. Dalton Trans. pp. 1349–1356. CSD CrossRef Web of Science Google Scholar
Agilent (2010). CrysAlis PRO. Agilent Technologies, Yarnton, England. Google Scholar
Dołęga, A. (2010). Coord. Chem. Rev. 254, 916–937. Google Scholar
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Our current research subject concerns the structural and spectroscopic characteristics of simple inorganic complexes - models of the catalytic site of the enzyme alcohol dehydrogenase. We use tri-tert- butoxysilanethiol as a source of thiolate function and aromatic N-ligands as histidine analogs (Dołęga, 2010 and references therein)
The title complex is the first heteroleptic cadmium(II) tri-tert-βutoxysilanethiolate with the pyrazole co-ligand. The NH group of pyrazole ligand forms an intramolecular hydrogen bond with oxygen and there are no other strong intra- or intermolecular interactions in the crystal other than van der Waals. Therefore with regard to the crystal packing the title compound resembles rather analogous pyridine-containing zinc and cadmium complexes than imidazole-containing analogs (Dołęga et al., 2005; Dołęga et al., 2006; and Dołęga et al. 2009). The coordination geometry is in between square-base pyramidal and trigonal-bipiramydal, but closer to the latter based on the calculation of the τ-parameter (0.597; Addison et al., 1984). The cadmium-ligand bond distances are comparable to those found in similar complexes (Dołęga et al., 2008; Dołęga et al., 2009). However, the single intramolecular NH···O hydrogen bond introduces further asymmetry into the molecule, including the bond lengths (i.e. Cd—O1 and Cd—O4, see Table 1). The title complex features a characteristic, large (> 140°) S—Cd—S angle, and an O—Cd—O angle close to 180°.
The molecular structure of (I) is shown in Fig. 1 and a crystal packing diagram is presented in Fig. 2.