metal-organic compounds
Bis(μ-4-methylbenzoato)-κ3O,O′:O;κ3O:O,O′-bis[aqua(4-methylbenzoato-κ2O,O′)(nicotinamide-κN1)cadmium]
aDepartment of Physics, Karabük University, 78050 Karabük, Turkey, bDepartment of Chemistry, Kafkas University, 36100 Kars, Turkey, and cDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey
*Correspondence e-mail: merzifon@hacettepe.edu.tr
In the dinuclear centrosymmetric title compound, [Cd2(C8H7O2)4(C6H6N2O)2(H2O)2], the CdII ion is chelated by two carboxylate groups from 4-methylbenzoate anions, and is further coordinated by one nicotinamide and one water molecule; a carboxylate O atom from an adjacent 4-methylbenzoate anion bridges to the CdII ion, completing the irregular coordination sphere of the seven ligand atoms. In the crystal, intermolecular O—H⋯O, N—H⋯O and weak C—H⋯O hydrogen bonds link the molecules into a three-dimensional network. The methylbenzene moiety of one bridging 4-methylbenzoate anion is disordered over two orientations of equal occupancy.
Related literature
For niacin, see: Krishnamachari (1974). For N,N-diethylnicotinamide, see: Bigoli et al. (1972). For related structures, see: Greenaway et al. (1984); Hökelek & Necefoğlu (1996); Hökelek et al. (2009a,b,c,d, 2010a,b); Zaman et al. (2012).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 2012).
Supporting information
10.1107/S1600536812047046/xu5651sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812047046/xu5651Isup2.hkl
The title compound was prepared by the reaction of 3CdSO4.8H2O (1.285 g, 5 mmol) in H2O (50 ml) and NA (1.220 g, 10 mmol) in H2O (20 ml) with sodium 4-methylbenzoate (1.580 g, 10 mmol) in H2O (400 ml). The mixture was filtered and set aside to crystallize at ambient temperature for three weeks, giving colorless single crystals.
Atoms H51 and H52 (for H2O) were located in a difference Fourier map and their positions were kept fixed during the
process. The remaining H atoms were positioned geometrically with N—H = 0.86 Å (for NH2), C—H = 0.93 and 0.96 Å for aromatic and methyl H atoms and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,N,O), where x = 1.5 for methyl and water H atoms and x = 1.2 for NH2 and aromatic H atoms. In the benzene ring A (C2-C7), the C2, C3, C4, C5 C6, C7 and the attached H3, H4, H6, H7 atoms, respectively, together with the C8, H81, H82 and H83 atoms of the methyl group attached at C5 are disordered over two orientations. During the process the disordered C2A, C3A, H3A, C4A, H4A, C5A, C6A, H6A, C7A, H7A, C8A, H8A1, H8A2, H8A3 and C2B, C3B, H3B, C4B, H4B, C5B, C6B, H6B, C7B, H7B, C8B, H8B1, H8B2, H8B3 atoms were refined with occupancies ratios of 0.50:0.50.Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 2012).Fig. 1. The molecular structure of the title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 40% probability level. Primed atoms are generated by the symmetry operators: (') 2 - x, 2 - y, 1 - z. |
[Cd2(C8H7O2)4(C6H6N2O)2(H2O)2] | Z = 1 |
Mr = 1045.65 | F(000) = 528 |
Triclinic, P1 | Dx = 1.637 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.5935 (2) Å | Cell parameters from 9926 reflections |
b = 10.3084 (2) Å | θ = 2.3–28.5° |
c = 12.6606 (3) Å | µ = 1.07 mm−1 |
α = 68.326 (3)° | T = 100 K |
β = 74.999 (3)° | Block, colorless |
γ = 66.916 (2)° | 0.36 × 0.31 × 0.28 mm |
V = 1060.81 (5) Å3 |
Bruker Kappa APEXII CCD area-detector diffractometer | 4169 independent reflections |
Radiation source: fine-focus sealed tube | 4085 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ϕ and ω scans | θmax = 26.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −11→11 |
Tmin = 0.687, Tmax = 0.741 | k = −12→12 |
16908 measured reflections | l = −15→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.019 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.048 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0193P)2 + 1.1679P] where P = (Fo2 + 2Fc2)/3 |
4169 reflections | (Δ/σ)max = 0.002 |
256 parameters | Δρmax = 1.08 e Å−3 |
0 restraints | Δρmin = −0.72 e Å−3 |
[Cd2(C8H7O2)4(C6H6N2O)2(H2O)2] | γ = 66.916 (2)° |
Mr = 1045.65 | V = 1060.81 (5) Å3 |
Triclinic, P1 | Z = 1 |
a = 9.5935 (2) Å | Mo Kα radiation |
b = 10.3084 (2) Å | µ = 1.07 mm−1 |
c = 12.6606 (3) Å | T = 100 K |
α = 68.326 (3)° | 0.36 × 0.31 × 0.28 mm |
β = 74.999 (3)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 4169 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4085 reflections with I > 2σ(I) |
Tmin = 0.687, Tmax = 0.741 | Rint = 0.021 |
16908 measured reflections |
R[F2 > 2σ(F2)] = 0.019 | 0 restraints |
wR(F2) = 0.048 | H-atom parameters constrained |
S = 1.05 | Δρmax = 1.08 e Å−3 |
4169 reflections | Δρmin = −0.72 e Å−3 |
256 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cd1 | 0.817156 (14) | 0.963852 (13) | 0.512013 (10) | 0.01282 (5) | |
O1 | 0.96132 (15) | 0.68775 (14) | 0.62253 (11) | 0.0203 (3) | |
O2 | 1.01690 (14) | 0.88132 (13) | 0.61152 (10) | 0.0160 (3) | |
O3 | 0.66922 (14) | 1.01399 (14) | 0.36876 (11) | 0.0172 (3) | |
O4 | 0.90596 (15) | 0.86161 (14) | 0.36017 (11) | 0.0181 (3) | |
O5 | 0.64150 (14) | 0.86318 (13) | 0.64128 (11) | 0.0169 (3) | |
H5A | 0.5440 | 0.8987 | 0.6376 | 0.025* | |
H5B | 0.6577 | 0.7756 | 0.6444 | 0.025* | |
O6 | 0.63943 (16) | 1.59642 (15) | 0.65749 (14) | 0.0291 (3) | |
N1 | 0.67632 (17) | 1.17891 (16) | 0.56260 (13) | 0.0151 (3) | |
N2 | 0.87749 (18) | 1.44037 (18) | 0.62850 (15) | 0.0220 (3) | |
H2A | 0.9187 | 1.4975 | 0.6345 | 0.026* | |
H2B | 0.9342 | 1.3578 | 0.6157 | 0.026* | |
C1 | 1.02645 (19) | 0.74445 (19) | 0.65768 (15) | 0.0140 (3) | |
C2A | 1.1134 (3) | 0.6536 (3) | 0.7611 (2) | 0.0220 (5) | 0.50 |
C3A | 1.2108 (4) | 0.7037 (3) | 0.7882 (3) | 0.0220 (5) | 0.50 |
H3A | 1.2330 | 0.7878 | 0.7384 | 0.026* | 0.50 |
C4A | 1.2749 (3) | 0.6283 (4) | 0.8898 (3) | 0.0220 (5) | 0.50 |
H4A | 1.3400 | 0.6618 | 0.9079 | 0.026* | 0.50 |
C5A | 1.2417 (3) | 0.5027 (3) | 0.9642 (2) | 0.0220 (5) | 0.50 |
C6A | 1.1444 (4) | 0.4525 (3) | 0.9370 (2) | 0.0220 (5) | 0.50 |
H6A | 1.1222 | 0.3685 | 0.9868 | 0.026* | 0.50 |
C7A | 1.0803 (3) | 0.5280 (3) | 0.8355 (2) | 0.0220 (5) | 0.50 |
H7A | 1.0151 | 0.4945 | 0.8173 | 0.026* | 0.50 |
C8A | 1.305 (3) | 0.422 (4) | 1.079 (3) | 0.042 (3) | 0.50 |
H8A1 | 1.3720 | 0.4670 | 1.0844 | 0.064* | 0.50 |
H8A2 | 1.3608 | 0.3199 | 1.0830 | 0.064* | 0.50 |
H8A3 | 1.2221 | 0.4272 | 1.1403 | 0.064* | 0.50 |
C2B | 1.1134 (3) | 0.6556 (3) | 0.7575 (2) | 0.0196 (5) | 0.50 |
C3B | 1.1715 (4) | 0.7249 (2) | 0.8029 (3) | 0.0196 (5) | 0.50 |
H3B | 1.1594 | 0.8249 | 0.7691 | 0.024* | 0.50 |
C4B | 1.2478 (3) | 0.6447 (3) | 0.8986 (3) | 0.0196 (5) | 0.50 |
H4B | 1.2867 | 0.6911 | 0.9289 | 0.024* | 0.50 |
C5B | 1.2659 (3) | 0.4953 (3) | 0.9490 (2) | 0.0196 (5) | 0.50 |
C6B | 1.2078 (4) | 0.4260 (2) | 0.9036 (2) | 0.0196 (5) | 0.50 |
H6B | 1.2199 | 0.3260 | 0.9373 | 0.024* | 0.50 |
C7B | 1.1315 (3) | 0.5061 (3) | 0.8079 (2) | 0.0196 (5) | 0.50 |
H7B | 1.0927 | 0.4597 | 0.7776 | 0.024* | 0.50 |
C8B | 1.340 (3) | 0.414 (4) | 1.059 (3) | 0.042 (3) | 0.50 |
H8B1 | 1.2836 | 0.3522 | 1.1132 | 0.064* | 0.50 |
H8B2 | 1.3403 | 0.4842 | 1.0919 | 0.064* | 0.50 |
H8B3 | 1.4436 | 0.3532 | 1.0422 | 0.064* | 0.50 |
C9 | 0.7838 (2) | 0.93699 (19) | 0.31593 (15) | 0.0147 (3) | |
C10 | 0.7771 (2) | 0.9423 (2) | 0.19762 (15) | 0.0167 (4) | |
C11 | 0.6466 (2) | 1.0303 (2) | 0.14489 (17) | 0.0236 (4) | |
H11 | 0.5596 | 1.0809 | 0.1854 | 0.028* | |
C12 | 0.6455 (3) | 1.0431 (2) | 0.03214 (18) | 0.0266 (4) | |
H12 | 0.5574 | 1.1024 | −0.0022 | 0.032* | |
C13 | 0.7736 (3) | 0.9690 (2) | −0.03055 (16) | 0.0244 (4) | |
C14 | 0.9032 (3) | 0.8808 (2) | 0.02313 (18) | 0.0269 (4) | |
H14 | 0.9898 | 0.8298 | −0.0172 | 0.032* | |
C15 | 0.9059 (2) | 0.8675 (2) | 0.13545 (17) | 0.0222 (4) | |
H15 | 0.9941 | 0.8083 | 0.1696 | 0.027* | |
C16 | 0.7713 (3) | 0.9837 (3) | −0.15339 (18) | 0.0347 (5) | |
H16A | 0.7736 | 0.8918 | −0.1577 | 0.052* | |
H16B | 0.8589 | 1.0080 | −0.2006 | 0.052* | |
H16C | 0.6798 | 1.0605 | −0.1799 | 0.052* | |
C17 | 0.7412 (2) | 1.25977 (19) | 0.58365 (15) | 0.0149 (3) | |
H17 | 0.8471 | 1.2344 | 0.5697 | 0.018* | |
C18 | 0.6572 (2) | 1.37934 (19) | 0.62518 (16) | 0.0168 (4) | |
C19 | 0.4990 (2) | 1.4139 (2) | 0.64957 (19) | 0.0250 (4) | |
H19 | 0.4395 | 1.4915 | 0.6796 | 0.030* | |
C20 | 0.4319 (2) | 1.3308 (2) | 0.6283 (2) | 0.0277 (5) | |
H20 | 0.3265 | 1.3514 | 0.6443 | 0.033* | |
C21 | 0.5235 (2) | 1.2166 (2) | 0.58314 (17) | 0.0203 (4) | |
H21 | 0.4772 | 1.1637 | 0.5663 | 0.024* | |
C22 | 0.7261 (2) | 1.4797 (2) | 0.63911 (16) | 0.0186 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.01161 (7) | 0.01484 (7) | 0.01396 (7) | −0.00428 (5) | −0.00216 (5) | −0.00624 (5) |
O1 | 0.0207 (7) | 0.0209 (7) | 0.0224 (7) | −0.0098 (5) | −0.0069 (5) | −0.0040 (5) |
O2 | 0.0167 (6) | 0.0148 (6) | 0.0150 (6) | −0.0054 (5) | −0.0026 (5) | −0.0022 (5) |
O3 | 0.0158 (6) | 0.0205 (6) | 0.0163 (6) | −0.0058 (5) | −0.0022 (5) | −0.0070 (5) |
O4 | 0.0169 (6) | 0.0194 (6) | 0.0190 (6) | −0.0036 (5) | −0.0053 (5) | −0.0075 (5) |
O5 | 0.0152 (6) | 0.0131 (6) | 0.0217 (7) | −0.0044 (5) | −0.0018 (5) | −0.0052 (5) |
O6 | 0.0198 (7) | 0.0197 (7) | 0.0533 (10) | −0.0052 (6) | −0.0021 (7) | −0.0203 (7) |
N1 | 0.0155 (7) | 0.0142 (7) | 0.0155 (7) | −0.0054 (6) | −0.0033 (6) | −0.0030 (6) |
N2 | 0.0172 (8) | 0.0180 (8) | 0.0365 (10) | −0.0057 (6) | −0.0044 (7) | −0.0142 (7) |
C1 | 0.0095 (8) | 0.0157 (8) | 0.0147 (8) | −0.0035 (7) | 0.0021 (6) | −0.0054 (7) |
C2A | 0.0206 (9) | 0.0223 (10) | 0.0217 (10) | −0.0072 (7) | −0.0045 (7) | −0.0038 (8) |
C3A | 0.0206 (9) | 0.0223 (10) | 0.0217 (10) | −0.0072 (7) | −0.0045 (7) | −0.0038 (8) |
C4A | 0.0206 (9) | 0.0223 (10) | 0.0217 (10) | −0.0072 (7) | −0.0045 (7) | −0.0038 (8) |
C5A | 0.0206 (9) | 0.0223 (10) | 0.0217 (10) | −0.0072 (7) | −0.0045 (7) | −0.0038 (8) |
C6A | 0.0206 (9) | 0.0223 (10) | 0.0217 (10) | −0.0072 (7) | −0.0045 (7) | −0.0038 (8) |
C7A | 0.0206 (9) | 0.0223 (10) | 0.0217 (10) | −0.0072 (7) | −0.0045 (7) | −0.0038 (8) |
C8A | 0.045 (9) | 0.042 (4) | 0.036 (8) | −0.020 (7) | −0.026 (6) | 0.012 (5) |
C2B | 0.0151 (8) | 0.0173 (10) | 0.0238 (10) | −0.0035 (6) | −0.0062 (7) | −0.0027 (8) |
C3B | 0.0151 (8) | 0.0173 (10) | 0.0238 (10) | −0.0035 (6) | −0.0062 (7) | −0.0027 (8) |
C4B | 0.0151 (8) | 0.0173 (10) | 0.0238 (10) | −0.0035 (6) | −0.0062 (7) | −0.0027 (8) |
C5B | 0.0151 (8) | 0.0173 (10) | 0.0238 (10) | −0.0035 (6) | −0.0062 (7) | −0.0027 (8) |
C6B | 0.0151 (8) | 0.0173 (10) | 0.0238 (10) | −0.0035 (6) | −0.0062 (7) | −0.0027 (8) |
C7B | 0.0151 (8) | 0.0173 (10) | 0.0238 (10) | −0.0035 (6) | −0.0062 (7) | −0.0027 (8) |
C8B | 0.045 (9) | 0.042 (4) | 0.036 (8) | −0.020 (7) | −0.026 (6) | 0.012 (5) |
C9 | 0.0188 (9) | 0.0142 (8) | 0.0145 (8) | −0.0106 (7) | −0.0021 (7) | −0.0023 (7) |
C10 | 0.0223 (9) | 0.0166 (8) | 0.0148 (9) | −0.0112 (7) | −0.0028 (7) | −0.0033 (7) |
C11 | 0.0226 (10) | 0.0288 (10) | 0.0200 (10) | −0.0069 (8) | −0.0040 (8) | −0.0090 (8) |
C12 | 0.0306 (11) | 0.0297 (11) | 0.0206 (10) | −0.0097 (9) | −0.0094 (8) | −0.0051 (8) |
C13 | 0.0385 (12) | 0.0239 (10) | 0.0152 (9) | −0.0165 (9) | −0.0040 (8) | −0.0039 (8) |
C14 | 0.0320 (11) | 0.0288 (10) | 0.0208 (10) | −0.0107 (9) | 0.0012 (8) | −0.0109 (8) |
C15 | 0.0243 (10) | 0.0229 (9) | 0.0201 (10) | −0.0084 (8) | −0.0034 (8) | −0.0063 (8) |
C16 | 0.0517 (15) | 0.0386 (12) | 0.0174 (10) | −0.0179 (11) | −0.0054 (10) | −0.0086 (9) |
C17 | 0.0149 (9) | 0.0154 (8) | 0.0143 (8) | −0.0061 (7) | −0.0021 (7) | −0.0029 (7) |
C18 | 0.0159 (9) | 0.0137 (8) | 0.0208 (9) | −0.0059 (7) | −0.0024 (7) | −0.0042 (7) |
C19 | 0.0169 (10) | 0.0172 (9) | 0.0415 (12) | −0.0037 (8) | −0.0008 (9) | −0.0137 (9) |
C20 | 0.0129 (9) | 0.0203 (9) | 0.0503 (14) | −0.0045 (8) | −0.0028 (9) | −0.0131 (9) |
C21 | 0.0172 (9) | 0.0156 (8) | 0.0298 (10) | −0.0073 (7) | −0.0056 (8) | −0.0050 (8) |
C22 | 0.0199 (9) | 0.0153 (8) | 0.0214 (9) | −0.0063 (7) | −0.0028 (7) | −0.0060 (7) |
Cd1—O1 | 2.6353 (13) | C2B—C7B | 1.3900 |
Cd1—O2 | 2.2722 (13) | C3B—C4B | 1.3900 |
Cd1—O2i | 2.5273 (12) | C3B—H3B | 0.9300 |
Cd1—O3 | 2.3739 (13) | C4B—C5B | 1.3900 |
Cd1—O4 | 2.3403 (13) | C4B—H4B | 0.9300 |
Cd1—O5 | 2.2987 (13) | C5B—C6B | 1.3900 |
Cd1—N1 | 2.3243 (15) | C5B—C8B | 1.53 (3) |
Cd1—C9 | 2.7076 (17) | C6B—C7B | 1.3900 |
N1—C17 | 1.345 (2) | C6B—H6B | 0.9300 |
N1—C21 | 1.341 (2) | C7B—H7B | 0.9300 |
N2—C22 | 1.330 (2) | C8B—H8B1 | 0.9600 |
N2—H2A | 0.8600 | C8B—H8B2 | 0.9600 |
N2—H2B | 0.8600 | C8B—H8B3 | 0.9600 |
O1—C1 | 1.246 (2) | C9—C10 | 1.496 (2) |
O2—C1 | 1.288 (2) | C10—C11 | 1.390 (3) |
O2—Cd1i | 2.5273 (12) | C10—C15 | 1.392 (3) |
O3—C9 | 1.270 (2) | C11—C12 | 1.387 (3) |
O4—C9 | 1.263 (2) | C11—H11 | 0.9300 |
O5—H5A | 0.8678 | C12—C13 | 1.389 (3) |
O5—H5B | 0.8411 | C12—H12 | 0.9300 |
O6—C22 | 1.231 (2) | C13—C14 | 1.389 (3) |
C1—C2B | 1.491 (3) | C13—C16 | 1.511 (3) |
C1—C2A | 1.528 (3) | C14—C15 | 1.383 (3) |
C2A—C3A | 1.3900 | C14—H14 | 0.9300 |
C2A—C7A | 1.3900 | C15—H15 | 0.9300 |
C3A—C4A | 1.3900 | C16—H16A | 0.9600 |
C3A—H3A | 0.9300 | C16—H16B | 0.9600 |
C4A—C5A | 1.3900 | C16—H16C | 0.9600 |
C4A—H4A | 0.9300 | C17—C18 | 1.388 (2) |
C5A—C6A | 1.3900 | C17—H17 | 0.9300 |
C5A—C8A | 1.53 (3) | C18—C19 | 1.393 (3) |
C6A—C7A | 1.3900 | C18—C22 | 1.506 (2) |
C6A—H6A | 0.9300 | C19—C20 | 1.383 (3) |
C7A—H7A | 0.9300 | C19—H19 | 0.9300 |
C8A—H8A1 | 0.9600 | C20—C21 | 1.382 (3) |
C8A—H8A2 | 0.9600 | C20—H20 | 0.9300 |
C8A—H8A3 | 0.9600 | C21—H21 | 0.9300 |
C2B—C3B | 1.3900 | ||
O1—Cd1—C9 | 101.80 (5) | C4B—C3B—C2B | 120.0 |
O2—Cd1—O1 | 52.85 (4) | C4B—C3B—H3B | 120.0 |
O2i—Cd1—O1 | 116.34 (4) | C2B—C3B—H3B | 120.0 |
O2—Cd1—O2i | 76.22 (5) | C5B—C4B—C3B | 120.0 |
O2—Cd1—O3 | 162.16 (4) | C5B—C4B—H4B | 120.0 |
O2—Cd1—O4 | 106.73 (4) | C3B—C4B—H4B | 120.0 |
O2—Cd1—O5 | 103.70 (4) | C4B—C5B—C6B | 120.0 |
O2—Cd1—N1 | 99.20 (5) | C4B—C5B—C8B | 118.4 (14) |
O2—Cd1—C9 | 134.23 (5) | C6B—C5B—C8B | 121.5 (14) |
O2i—Cd1—C9 | 86.97 (5) | C7B—C6B—C5B | 120.0 |
O3—Cd1—O1 | 119.67 (4) | C7B—C6B—H6B | 120.0 |
O3—Cd1—O2i | 96.74 (4) | C5B—C6B—H6B | 120.0 |
O3—Cd1—C9 | 27.97 (5) | C6B—C7B—C2B | 120.0 |
O4—Cd1—O1 | 80.08 (4) | C6B—C7B—H7B | 120.0 |
O4—Cd1—O2i | 81.30 (4) | C2B—C7B—H7B | 120.0 |
O4—Cd1—O3 | 55.62 (4) | C5B—C8B—H8B1 | 109.5 |
O4—Cd1—C9 | 27.78 (5) | C5B—C8B—H8B2 | 109.5 |
O5—Cd1—O1 | 71.23 (4) | H8B1—C8B—H8B2 | 109.5 |
O5—Cd1—O2i | 167.88 (4) | C5B—C8B—H8B3 | 109.5 |
O5—Cd1—O3 | 86.63 (4) | H8B1—C8B—H8B3 | 109.5 |
O5—Cd1—O4 | 109.99 (5) | H8B2—C8B—H8B3 | 109.5 |
O5—Cd1—N1 | 86.22 (5) | O4—C9—O3 | 120.53 (16) |
O5—Cd1—C9 | 101.04 (5) | O4—C9—C10 | 119.65 (16) |
N1—Cd1—O1 | 135.38 (5) | O3—C9—C10 | 119.74 (16) |
N1—Cd1—O2i | 81.86 (5) | O4—C9—Cd1 | 59.71 (9) |
N1—Cd1—O3 | 95.92 (5) | O3—C9—Cd1 | 61.25 (9) |
N1—Cd1—O4 | 144.53 (5) | C10—C9—Cd1 | 170.35 (12) |
N1—Cd1—C9 | 120.41 (5) | C11—C10—C15 | 118.92 (17) |
C1—O1—Cd1 | 84.10 (10) | C11—C10—C9 | 120.69 (17) |
Cd1—O2—Cd1i | 103.78 (5) | C15—C10—C9 | 120.21 (17) |
C1—O2—Cd1 | 99.86 (11) | C12—C11—C10 | 120.23 (19) |
C1—O2—Cd1i | 139.66 (11) | C12—C11—H11 | 119.9 |
C9—O3—Cd1 | 90.78 (10) | C10—C11—H11 | 119.9 |
C9—O4—Cd1 | 92.51 (10) | C11—C12—C13 | 121.2 (2) |
Cd1—O5—H5A | 124.2 | C11—C12—H12 | 119.4 |
Cd1—O5—H5B | 113.2 | C13—C12—H12 | 119.4 |
H5A—O5—H5B | 99.0 | C14—C13—C12 | 118.05 (18) |
C17—N1—Cd1 | 123.00 (12) | C14—C13—C16 | 121.1 (2) |
C21—N1—Cd1 | 118.75 (12) | C12—C13—C16 | 120.8 (2) |
C21—N1—C17 | 117.90 (16) | C15—C14—C13 | 121.3 (2) |
C22—N2—H2A | 120.0 | C15—C14—H14 | 119.4 |
C22—N2—H2B | 120.0 | C13—C14—H14 | 119.4 |
H2A—N2—H2B | 120.0 | C14—C15—C10 | 120.27 (19) |
O1—C1—O2 | 121.27 (16) | C14—C15—H15 | 119.9 |
O1—C1—C2B | 120.30 (18) | C10—C15—H15 | 119.9 |
O2—C1—C2B | 118.40 (18) | C13—C16—H16A | 109.5 |
O1—C1—C2A | 120.12 (19) | C13—C16—H16B | 109.5 |
O2—C1—C2A | 118.55 (18) | H16A—C16—H16B | 109.5 |
C3A—C2A—C7A | 120.0 | C13—C16—H16C | 109.5 |
C3A—C2A—C1 | 121.0 (2) | H16A—C16—H16C | 109.5 |
C7A—C2A—C1 | 118.6 (2) | H16B—C16—H16C | 109.5 |
C4A—C3A—C2A | 120.0 | N1—C17—C18 | 122.98 (17) |
C4A—C3A—H3A | 120.0 | N1—C17—H17 | 118.5 |
C2A—C3A—H3A | 120.0 | C18—C17—H17 | 118.5 |
C3A—C4A—C5A | 120.0 | C17—C18—C19 | 118.31 (17) |
C3A—C4A—H4A | 120.0 | C17—C18—C22 | 123.76 (16) |
C5A—C4A—H4A | 120.0 | C19—C18—C22 | 117.83 (16) |
C6A—C5A—C4A | 120.0 | C20—C19—C18 | 118.87 (18) |
C6A—C5A—C8A | 118.9 (13) | C20—C19—H19 | 120.6 |
C4A—C5A—C8A | 121.0 (13) | C18—C19—H19 | 120.6 |
C7A—C6A—C5A | 120.0 | C21—C20—C19 | 119.12 (18) |
C7A—C6A—H6A | 120.0 | C21—C20—H20 | 120.4 |
C5A—C6A—H6A | 120.0 | C19—C20—H20 | 120.4 |
C6A—C7A—C2A | 120.0 | N1—C21—C20 | 122.76 (17) |
C6A—C7A—H7A | 120.0 | N1—C21—H21 | 118.6 |
C2A—C7A—H7A | 120.0 | C20—C21—H21 | 118.6 |
C3B—C2B—C7B | 120.0 | O6—C22—N2 | 122.79 (17) |
C3B—C2B—C1 | 119.3 (2) | O6—C22—C18 | 118.32 (17) |
C7B—C2B—C1 | 120.6 (2) | N2—C22—C18 | 118.87 (16) |
O2—Cd1—O1—C1 | 7.87 (10) | Cd1—O2—C1—C2B | −162.66 (17) |
O2i—Cd1—O1—C1 | 52.76 (11) | Cd1i—O2—C1—C2B | 72.0 (2) |
O3—Cd1—O1—C1 | 168.40 (10) | Cd1—O3—C9—O4 | 7.53 (16) |
O4—Cd1—O1—C1 | 127.81 (10) | Cd1—O3—C9—C10 | −168.99 (14) |
O5—Cd1—O1—C1 | −116.97 (11) | Cd1—O4—C9—O3 | −7.64 (16) |
N1—Cd1—O1—C1 | −53.31 (12) | Cd1—O4—C9—C10 | 168.88 (13) |
C9—Cd1—O1—C1 | 145.24 (10) | Cd1—N1—C17—C18 | −173.17 (13) |
O1—Cd1—O2—Cd1i | 139.37 (7) | C21—N1—C17—C18 | −0.1 (3) |
O1—Cd1—O2—C1 | −7.69 (9) | Cd1—N1—C21—C20 | 171.10 (16) |
O2i—Cd1—O2—Cd1i | 0.0 | C17—N1—C21—C20 | −2.3 (3) |
O2i—Cd1—O2—C1 | −147.05 (12) | O1—C1—C2A—C3A | 167.42 (17) |
O3—Cd1—O2—Cd1i | 68.42 (15) | O1—C1—C2A—C7A | −19.9 (3) |
O3—Cd1—O2—C1 | −78.64 (18) | O2—C1—C2A—C3A | −15.5 (3) |
O4—Cd1—O2—Cd1i | 76.33 (5) | O2—C1—C2A—C7A | 157.16 (18) |
O4—Cd1—O2—C1 | −70.73 (11) | C2B—C1—C2A—C3A | 64 (16) |
O5—Cd1—O2—Cd1i | −167.52 (4) | C2B—C1—C2A—C7A | −124 (16) |
O5—Cd1—O2—C1 | 45.42 (11) | C1—C2A—C3A—C4A | 172.5 (3) |
N1—Cd1—O2—Cd1i | −79.20 (5) | C7A—C2A—C3A—C4A | 0.0 |
N1—Cd1—O2—C1 | 133.75 (10) | C1—C2A—C7A—C6A | −172.7 (3) |
C9—Cd1—O2—Cd1i | 71.66 (7) | C3A—C2A—C7A—C6A | 0.0 |
C9—Cd1—O2—C1 | −75.39 (12) | C2A—C3A—C4A—C5A | 0.0 |
O1—Cd1—O3—C9 | −55.17 (11) | C3A—C4A—C5A—C6A | 0.0 |
O2—Cd1—O3—C9 | 5.0 (2) | C3A—C4A—C5A—C8A | −177.3 (11) |
O2i—Cd1—O3—C9 | 70.38 (10) | C4A—C5A—C6A—C7A | 0.0 |
O4—Cd1—O3—C9 | −4.23 (9) | C8A—C5A—C6A—C7A | 177.4 (11) |
O5—Cd1—O3—C9 | −121.31 (10) | C5A—C6A—C7A—C2A | 0.0 |
N1—Cd1—O3—C9 | 152.85 (10) | O1—C1—C2B—C3B | −173.29 (17) |
O1—Cd1—O4—C9 | 141.03 (10) | O1—C1—C2B—C7B | 4.2 (3) |
O2—Cd1—O4—C9 | −172.81 (10) | O2—C1—C2B—C3B | 4.7 (3) |
O2i—Cd1—O4—C9 | −100.13 (10) | O2—C1—C2B—C7B | −177.77 (17) |
O3—Cd1—O4—C9 | 4.26 (9) | C2A—C1—C2B—C3B | −97 (16) |
O5—Cd1—O4—C9 | 75.32 (10) | C2A—C1—C2B—C7B | 81 (16) |
N1—Cd1—O4—C9 | −37.61 (14) | C1—C2B—C3B—C4B | 177.6 (2) |
O1—Cd1—N1—C17 | 77.16 (15) | C7B—C2B—C3B—C4B | 0.0 |
O1—Cd1—N1—C21 | −95.89 (14) | C1—C2B—C7B—C6B | −177.5 (3) |
O2—Cd1—N1—C17 | 32.13 (14) | C3B—C2B—C7B—C6B | 0.0 |
O2i—Cd1—N1—C17 | −42.39 (13) | C2B—C3B—C4B—C5B | 0.0 |
O2—Cd1—N1—C21 | −140.92 (13) | C3B—C4B—C5B—C6B | 0.0 |
O2i—Cd1—N1—C21 | 144.57 (14) | C3B—C4B—C5B—C8B | −175.6 (9) |
O3—Cd1—N1—C17 | −138.37 (13) | C4B—C5B—C6B—C7B | 0.0 |
O3—Cd1—N1—C21 | 48.58 (14) | C8B—C5B—C6B—C7B | 175.5 (9) |
O4—Cd1—N1—C17 | −104.74 (14) | C5B—C6B—C7B—C2B | 0.0 |
O4—Cd1—N1—C21 | 82.21 (16) | O3—C9—C10—C11 | −0.2 (3) |
O5—Cd1—N1—C17 | 135.41 (14) | O3—C9—C10—C15 | 174.98 (16) |
O5—Cd1—N1—C21 | −37.63 (14) | O4—C9—C10—C11 | −176.73 (17) |
C9—Cd1—N1—C17 | −124.00 (13) | O4—C9—C10—C15 | −1.6 (3) |
C9—Cd1—N1—C21 | 62.95 (15) | C9—C10—C11—C12 | 175.15 (18) |
O1—Cd1—C9—O3 | 133.23 (9) | C15—C10—C11—C12 | −0.1 (3) |
O1—Cd1—C9—O4 | −39.26 (10) | C9—C10—C15—C14 | −175.38 (17) |
O2—Cd1—C9—O3 | −177.88 (8) | C11—C10—C15—C14 | −0.1 (3) |
O2i—Cd1—C9—O3 | −110.49 (10) | C10—C11—C12—C13 | 0.0 (3) |
O2—Cd1—C9—O4 | 9.63 (13) | C11—C12—C13—C14 | 0.2 (3) |
O2i—Cd1—C9—O4 | 77.02 (10) | C11—C12—C13—C16 | 180.00 (19) |
O3—Cd1—C9—O4 | −172.49 (16) | C12—C13—C14—C15 | −0.4 (3) |
O4—Cd1—C9—O3 | 172.49 (16) | C16—C13—C14—C15 | 179.8 (2) |
O5—Cd1—C9—O3 | 60.34 (10) | C13—C14—C15—C10 | 0.4 (3) |
O5—Cd1—C9—O4 | −112.15 (10) | N1—C17—C18—C19 | 2.1 (3) |
N1—Cd1—C9—O3 | −31.76 (11) | N1—C17—C18—C22 | −174.19 (16) |
N1—Cd1—C9—O4 | 155.75 (9) | C17—C18—C19—C20 | −1.9 (3) |
Cd1—O1—C1—O2 | −13.02 (15) | C22—C18—C19—C20 | 174.68 (19) |
Cd1—O1—C1—C2A | 164.00 (18) | C17—C18—C22—O6 | 167.60 (18) |
Cd1—O1—C1—C2B | 164.90 (18) | C17—C18—C22—N2 | −10.9 (3) |
Cd1—O2—C1—O1 | 15.30 (18) | C19—C18—C22—O6 | −8.8 (3) |
Cd1i—O2—C1—O1 | −110.02 (19) | C19—C18—C22—N2 | 172.76 (19) |
Cd1—O2—C1—C2A | −161.77 (16) | C18—C19—C20—C21 | −0.3 (3) |
Cd1i—O2—C1—C2A | 72.9 (2) | C19—C20—C21—N1 | 2.5 (3) |
Symmetry code: (i) −x+2, −y+2, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1ii | 0.86 | 2.10 | 2.931 (2) | 162 |
N2—H2B···O4i | 0.86 | 2.14 | 2.963 (2) | 161 |
O5—H5A···O3iii | 0.87 | 1.89 | 2.761 (2) | 177 |
O5—H5B···O6iv | 0.84 | 1.87 | 2.689 (2) | 165 |
C3A—H3A···O3i | 0.93 | 2.39 | 3.303 (3) | 169 |
C11—H11···O5iii | 0.93 | 2.60 | 3.481 (2) | 159 |
C17—H17···O4i | 0.93 | 2.45 | 3.286 (2) | 150 |
C21—H21···O3iii | 0.93 | 2.51 | 3.352 (3) | 150 |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) x, y+1, z; (iii) −x+1, −y+2, −z+1; (iv) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Cd2(C8H7O2)4(C6H6N2O)2(H2O)2] |
Mr | 1045.65 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 9.5935 (2), 10.3084 (2), 12.6606 (3) |
α, β, γ (°) | 68.326 (3), 74.999 (3), 66.916 (2) |
V (Å3) | 1060.81 (5) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 1.07 |
Crystal size (mm) | 0.36 × 0.31 × 0.28 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.687, 0.741 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16908, 4169, 4085 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.019, 0.048, 1.05 |
No. of reflections | 4169 |
No. of parameters | 256 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.08, −0.72 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), Mercury (Macrae et al., 2006), WinGX (Farrugia, 2012).
Cd1—O1 | 2.6353 (13) | Cd1—O4 | 2.3403 (13) |
Cd1—O2 | 2.2722 (13) | Cd1—O5 | 2.2987 (13) |
Cd1—O2i | 2.5273 (12) | Cd1—N1 | 2.3243 (15) |
Cd1—O3 | 2.3739 (13) |
Symmetry code: (i) −x+2, −y+2, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O1ii | 0.86 | 2.10 | 2.931 (2) | 162 |
N2—H2B···O4i | 0.86 | 2.14 | 2.963 (2) | 161 |
O5—H5A···O3iii | 0.87 | 1.89 | 2.761 (2) | 177 |
O5—H5B···O6iv | 0.84 | 1.87 | 2.689 (2) | 165 |
C3A—H3A···O3i | 0.93 | 2.39 | 3.303 (3) | 169 |
C11—H11···O5iii | 0.93 | 2.60 | 3.481 (2) | 159 |
C17—H17···O4i | 0.93 | 2.45 | 3.286 (2) | 150 |
C21—H21···O3iii | 0.93 | 2.51 | 3.352 (3) | 150 |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) x, y+1, z; (iii) −x+1, −y+2, −z+1; (iv) x, y−1, z. |
Acknowledgements
The authors are indebted to Anadolu University and the Medicinal Plants and Medicine Research Centre of Anadolu University, Eskişehir, Turkey, for the use of the X-ray diffractometer. This work was supported financially by Kafkas University Research Fund (grant No. 2009-FEF-03).
References
Bigoli, F., Braibanti, A., Pellinghelli, M. A. & Tiripicchio, A. (1972). Acta Cryst. B28, 962–966. CSD CrossRef CAS IUCr Journals Web of Science Google Scholar
Bruker (2005). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Greenaway, F. T., Pezeshk, A., Cordes, A. W., Noble, M. C. & Sorenson, J. R. J. (1984). Inorg. Chim. Acta, 93, 67–71. CSD CrossRef CAS Web of Science Google Scholar
Hökelek, T., Dal, H., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2009b). Acta Cryst. E65, m627–m628. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hökelek, T., Dal, H., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2009c). Acta Cryst. E65, m1037–m1038. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hökelek, T., Dal, H., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2009d). Acta Cryst. E65, m1365–m1366. Web of Science CrossRef IUCr Journals Google Scholar
Hökelek, T. & Necefoğlu, H. (1996). Acta Cryst. C52, 1128–1131. CSD CrossRef Web of Science IUCr Journals Google Scholar
Hökelek, T., Sağlam, E. G., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2010b). Acta Cryst. E66, m1559–m1560. Web of Science CrossRef IUCr Journals Google Scholar
Hökelek, T., Süzen, Y., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2010a). Acta Cryst. E66, m782–m783. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hökelek, T., Yılmaz, F., Tercan, B., Gürgen, F. & Necefoğlu, H. (2009a). Acta Cryst. E65, m1416–m1417. Web of Science CrossRef IUCr Journals Google Scholar
Krishnamachari, K. A. V. R. (1974). Am. J. Clin. Nutr. 27, 108–111. CAS PubMed Web of Science Google Scholar
Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst. 39, 453–457. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Zaman, I. G., Çaylak Delibaş, N., Necefoğlu, H. & Hökelek, T. (2012). Acta Cryst. E68, m198–m199. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its crystal structure is reported herein.
The title compound, (I), consists of dimeric units located around a crystallographic symmetry centre and made up of two Cd cations, four 4-methylbenzoate (PMB) anions, two nicotinamide (NA) ligands and two water molecules (Fig. 1). Each Cd(II) unit is chelated by the carboxylate O atoms of the two PMB anions, and the two monomeric units are bridged through the two oxygen atoms of the two carboxylate groups about an inversion center. The coordination number of each CdII atom is seven. The Cd1···Cd1i distance is 3.7796 (2) Å and O1-Cd1-O1i angle is 76.19 (4)° (symmetry code: (i) -x, -y, 1 - z).
The average Cd-O bond length (Table 1) is 2.4080 (13) Å, and the Cd atom is displaced out of the least-squares planes of the carboxylate groups (O1/C1/O2) and (O3/C9/O4) by -0.5904 (1) and 0.3109 (1) Å, respectively. In (I), the O1-Cd1-O2 and O3-Cd1-O4 angles are 52.85 (4) and 55.62 (4) °, respectively. The corresponding O-M-O (where M is a metal) angles are 53.71 (4)° and 54.59 (4)° in [Cd2(HB)4(INA)2].4H2O (Zaman et al., 2012), 55.71 (5)° and 117.52 (4)° in [Cd2(MAB)4(NA)2(H2O)2] (Hökelek et al., 2010b), 55.96 (4)° and 53.78 (4)° in [Cd2(DMAB)4(NA)2(H2O)2] (Hökelek et al., 2010a), 52.91 (4)° and 53.96 (4)° in [Cd(FB)2(INA)2(H2O)].H2O (Hökelek et al., 2009a), 60.70 (4)° in [Co(DMAB)2(INA)(H2O)2] (Hökelek et al., 2009b), 58.45 (9)° in [Mn(DMAB)2(INA)(H2O)2] (Hökelek et al., 2009c), 60.03 (6)° in [Zn(MAB)2(INA)2].H2O (Hökelek et al., 2009d), 58.3 (3)° in [Zn2(DENA)2(HB)4].2H2O (Hökelek & Necefoğlu, 1996) [where NA, INA, DENA, HB, FB, MAB and DMAB are nicotinamide, isonicotinamide, N,N-diethylnicotinamide, 3- or 4-hydroxybenzoate, 4-formylbenzoate, 4-methylaminobenzoate and 4-dimethylaminobenzoate, respectively] and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) (Greenaway et al., 1984).
The dihedral angle between the planar carboxylate group (O3/C9/O4) and the adjacent benzene ring B (C10-C15) is 7.21 (19) °, while those between rings B, C (N1/C17-C21), D (Cd1/O1/O2/C1) and E (Cd1/O3/O4/C9) are B/C = 59.55 (7) and D/E = 63.01 (5)°.
In the crystal structure, intermolecular O-H···O, N-H···O and C-H···O hydrogen bonds (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure.