organic compounds
(1S,3aS,4S,7aS)-Ethyl 1-benzyl-2-(4-methoxybenzyl)-6,7-dimethyl-3-oxo-2,3,3a,4,5,7a-hexahydro-1H-isoindole-4-carboxylate dichloromethane monosolvate
aLaboratory of Asymmetric Catalysis and Synthesis, Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310027, People's Republic of China
*Correspondence e-mail: wyz@zju.edu.cn
In the title compound, C28H33NO4·CH2Cl2, the pyrrolidone ring adopts a twisted and the cyclohexene has a half-chair conformation. In the crystal, weak C—H⋯O hydrogen bonds link the components into chains along [100].
Related literature
For isoindolin-1-one derivatives in cytochalasins, see: Liu et al. (2006); Cox et al. (1983).
Experimental
Crystal data
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Data collection: CrysAlis PRO (Oxford Diffraction, 2011); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2.
Supporting information
10.1107/S1600536813002560/cv5380sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813002560/cv5380Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813002560/cv5380Isup3.cml
To a solution of the (S,E)-N-(4-methoxybenzyl)-4,5-dimethyl-1-phenylhexa-3,5-dien-2-amine (272 mg, 0.85 mmol), 4-(dimethylamino)pyridine (DMAP) (10 mg, 0.085 mmol) and fumaric acid monoethyl ester (159 mg, 1.1 mmol) in dry CH2Cl2 cooled in an ice-water bath (273 K) under a nitrogen atmosphere, was added N, N'-diisopropylcarbodiimide (DIC) (164 mg, 1.3 mmol) and the reaction mixture was stirred for 4 hours at room temperature. After adding Celite, the mixture was stirred for another 30 minutes, and then the solid was filtered off and washed with CH2Cl2. The combined filtrate was evaporated under reduced pressure and the residue was purified by flash
(silica gel, 25% of ethyl acetate in hexane) to afford the title compound in 89% yield (338 mg) as a white solid (m.p. 381–382 K). Single crystals suitable for X-ray diffraction of the title compound were grown in CH2Cl2.The H atoms were placed in calculated positions with C—H = 0.93– 0.98 Å according to their own
model. And included in the in riding model with U iso(H)=1.2Ueq or 1.5Ueq (sp3) of the carrier atom.Data collection: CrysAlis PRO (Oxford Diffraction, 2011); cell
CrysAlis PRO (Oxford Diffraction, 2011); data reduction: CrysAlis PRO (Oxford Diffraction, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).C28H33NO4·CH2Cl2 | F(000) = 564 |
Mr = 532.48 | Dx = 1.274 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 2239 reflections |
a = 9.6864 (5) Å | θ = 2.9–29.1° |
b = 15.5706 (8) Å | µ = 0.27 mm−1 |
c = 9.7460 (6) Å | T = 293 K |
β = 109.221 (7)° | Block, colourless |
V = 1387.99 (14) Å3 | 0.32 × 0.26 × 0.23 mm |
Z = 2 |
Oxford Diffraction Xcalibur (Atlas, Gemini ultra) diffractometer | 3844 independent reflections |
Radiation source: fine-focus sealed tube | 2990 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
Detector resolution: 10.3592 pixels mm-1 | θmax = 25.4°, θmin = 2.9° |
ω scans | h = −11→11 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2011) | k = −18→14 |
Tmin = 0.919, Tmax = 0.941 | l = −11→11 |
6260 measured reflections |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.048 | w = 1/[σ2(Fo2) + (0.0493P)2 + 0.5082P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.127 | (Δ/σ)max < 0.001 |
S = 1.07 | Δρmax = 0.26 e Å−3 |
3844 reflections | Δρmin = −0.22 e Å−3 |
330 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
1 restraint | Extinction coefficient: 0.0155 (19) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 1789 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: −0.05 (11) |
C28H33NO4·CH2Cl2 | V = 1387.99 (14) Å3 |
Mr = 532.48 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 9.6864 (5) Å | µ = 0.27 mm−1 |
b = 15.5706 (8) Å | T = 293 K |
c = 9.7460 (6) Å | 0.32 × 0.26 × 0.23 mm |
β = 109.221 (7)° |
Oxford Diffraction Xcalibur (Atlas, Gemini ultra) diffractometer | 3844 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2011) | 2990 reflections with I > 2σ(I) |
Tmin = 0.919, Tmax = 0.941 | Rint = 0.024 |
6260 measured reflections |
R[F2 > 2σ(F2)] = 0.048 | H-atom parameters constrained |
wR(F2) = 0.127 | Δρmax = 0.26 e Å−3 |
S = 1.07 | Δρmin = −0.22 e Å−3 |
3844 reflections | Absolute structure: Flack (1983), 1789 Friedel pairs |
330 parameters | Absolute structure parameter: −0.05 (11) |
1 restraint |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.9553 (2) | 0.0250 (2) | 1.0097 (3) | 0.1866 (12) | |
Cl2 | 0.65374 (18) | 0.04546 (13) | 0.85047 (17) | 0.1164 (6) | |
O1 | 1.3771 (3) | −0.2369 (2) | 0.9604 (3) | 0.0767 (10) | |
O2 | 0.8238 (3) | −0.02886 (19) | 0.3287 (3) | 0.0632 (8) | |
O3 | 0.5215 (3) | 0.0189 (2) | 0.4345 (4) | 0.0860 (11) | |
O4 | 0.5046 (3) | 0.0707 (2) | 0.2171 (3) | 0.0750 (9) | |
N1 | 1.0380 (3) | 0.0314 (2) | 0.4734 (3) | 0.0468 (7) | |
C1 | 1.5287 (6) | −0.2472 (4) | 1.0238 (6) | 0.0980 (19) | |
H1A | 1.5670 | −0.2747 | 0.9558 | 0.147* | |
H1C | 1.5490 | −0.2820 | 1.1095 | 0.147* | |
H1B | 1.5738 | −0.1920 | 1.0495 | 0.147* | |
C2 | 1.3277 (4) | −0.1863 (3) | 0.8388 (4) | 0.0495 (9) | |
C3 | 1.1780 (4) | −0.1758 (3) | 0.7830 (4) | 0.0560 (10) | |
H3 | 1.1186 | −0.2016 | 0.8291 | 0.067* | |
C4 | 1.1162 (4) | −0.1279 (3) | 0.6604 (4) | 0.0528 (10) | |
H4 | 1.0151 | −0.1221 | 0.6234 | 0.063* | |
C5 | 1.2028 (4) | −0.0879 (2) | 0.5907 (4) | 0.0446 (9) | |
C6 | 1.3511 (4) | −0.0988 (3) | 0.6482 (4) | 0.0497 (10) | |
H6 | 1.4107 | −0.0726 | 0.6028 | 0.060* | |
C7 | 1.4150 (4) | −0.1476 (3) | 0.7712 (4) | 0.0540 (10) | |
H7 | 1.5160 | −0.1540 | 0.8077 | 0.065* | |
C8 | 1.1352 (4) | −0.0356 (3) | 0.4546 (4) | 0.0524 (10) | |
H8B | 1.2124 | −0.0094 | 0.4261 | 0.063* | |
H8A | 1.0805 | −0.0736 | 0.3768 | 0.063* | |
C9 | 1.0877 (4) | 0.0985 (2) | 0.5848 (4) | 0.0464 (9) | |
H9 | 1.1032 | 0.0723 | 0.6801 | 0.056* | |
C10 | 1.2300 (4) | 0.1407 (3) | 0.5864 (5) | 0.0587 (11) | |
H10B | 1.2683 | 0.1730 | 0.6761 | 0.070* | |
H10A | 1.2998 | 0.0956 | 0.5888 | 0.070* | |
C11 | 1.2230 (4) | 0.2007 (3) | 0.4609 (5) | 0.0541 (10) | |
C12 | 1.1740 (4) | 0.1739 (3) | 0.3175 (5) | 0.0594 (11) | |
H12 | 1.1423 | 0.1176 | 0.2952 | 0.071* | |
C13 | 1.1717 (5) | 0.2301 (4) | 0.2072 (6) | 0.0779 (15) | |
H13 | 1.1389 | 0.2109 | 0.1116 | 0.093* | |
C14 | 1.2158 (5) | 0.3122 (4) | 0.2352 (8) | 0.0866 (17) | |
H14 | 1.2121 | 0.3493 | 0.1594 | 0.104* | |
C15 | 1.2661 (5) | 0.3406 (3) | 0.3754 (8) | 0.0840 (17) | |
H15 | 1.2977 | 0.3971 | 0.3952 | 0.101* | |
C16 | 1.2701 (4) | 0.2854 (3) | 0.4887 (6) | 0.0705 (13) | |
H16 | 1.3046 | 0.3053 | 0.5839 | 0.085* | |
C17 | 0.9501 (4) | 0.1545 (2) | 0.5469 (4) | 0.0426 (9) | |
H17 | 0.9475 | 0.1889 | 0.4620 | 0.051* | |
C18 | 0.8293 (4) | 0.0886 (2) | 0.4960 (4) | 0.0455 (9) | |
H18 | 0.8208 | 0.0606 | 0.5829 | 0.055* | |
C19 | 0.8895 (4) | 0.0240 (3) | 0.4187 (4) | 0.0470 (9) | |
C20 | 0.6846 (4) | 0.1320 (3) | 0.4198 (4) | 0.0515 (10) | |
H20 | 0.6935 | 0.1668 | 0.3394 | 0.062* | |
C21 | 0.6515 (5) | 0.1908 (3) | 0.5308 (5) | 0.0699 (13) | |
H21B | 0.5880 | 0.2367 | 0.4785 | 0.084* | |
H21A | 0.5975 | 0.1580 | 0.5809 | 0.084* | |
C22 | 0.7822 (5) | 0.2308 (3) | 0.6435 (5) | 0.0604 (11) | |
C23 | 0.9207 (5) | 0.2151 (3) | 0.6560 (4) | 0.0556 (10) | |
C24 | 1.0504 (6) | 0.2564 (3) | 0.7643 (5) | 0.0743 (13) | |
H24B | 1.1009 | 0.2909 | 0.7143 | 0.111* | |
H24C | 1.1150 | 0.2129 | 0.8197 | 0.111* | |
H24A | 1.0185 | 0.2921 | 0.8284 | 0.111* | |
C25 | 0.7356 (6) | 0.2921 (3) | 0.7405 (6) | 0.0922 (18) | |
H25B | 0.6867 | 0.3406 | 0.6845 | 0.138* | |
H25C | 0.8202 | 0.3114 | 0.8176 | 0.138* | |
H25A | 0.6704 | 0.2632 | 0.7809 | 0.138* | |
C26 | 0.5632 (4) | 0.0670 (3) | 0.3608 (5) | 0.0645 (12) | |
C27 | 0.3958 (7) | 0.0046 (4) | 0.1472 (7) | 0.105 (2) | |
H27B | 0.4442 | −0.0502 | 0.1491 | 0.126* | |
H27A | 0.3269 | −0.0017 | 0.1997 | 0.126* | |
C28 | 0.3196 (7) | 0.0291 (5) | −0.0004 (7) | 0.116 (2) | |
H28C | 0.3869 | 0.0304 | −0.0539 | 0.173* | |
H28B | 0.2774 | 0.0850 | −0.0020 | 0.173* | |
H28A | 0.2436 | −0.0118 | −0.0439 | 0.173* | |
C29 | 0.7904 (7) | 0.0628 (5) | 1.0126 (7) | 0.124 (2) | |
H29A | 0.7983 | 0.1239 | 1.0332 | 0.149* | |
H29B | 0.7654 | 0.0346 | 1.0900 | 0.149* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0957 (13) | 0.250 (3) | 0.191 (2) | −0.0212 (17) | 0.0151 (13) | −0.069 (2) |
Cl2 | 0.1087 (11) | 0.1250 (14) | 0.1006 (11) | −0.0138 (10) | 0.0143 (9) | −0.0090 (10) |
O1 | 0.064 (2) | 0.099 (3) | 0.069 (2) | 0.0249 (18) | 0.0239 (16) | 0.0291 (19) |
O2 | 0.0567 (17) | 0.0626 (19) | 0.0627 (18) | −0.0058 (15) | 0.0091 (14) | −0.0102 (16) |
O3 | 0.0700 (19) | 0.094 (3) | 0.096 (2) | −0.0166 (19) | 0.0301 (18) | 0.034 (2) |
O4 | 0.0652 (18) | 0.080 (2) | 0.072 (2) | −0.0154 (17) | 0.0118 (16) | 0.0209 (17) |
N1 | 0.0445 (17) | 0.0443 (19) | 0.0474 (17) | 0.0077 (15) | 0.0093 (13) | −0.0010 (15) |
C1 | 0.079 (4) | 0.128 (5) | 0.079 (4) | 0.039 (3) | 0.016 (3) | 0.029 (3) |
C2 | 0.051 (2) | 0.048 (2) | 0.050 (2) | 0.0079 (19) | 0.0177 (18) | 0.0022 (19) |
C3 | 0.046 (2) | 0.056 (3) | 0.072 (3) | −0.006 (2) | 0.027 (2) | 0.002 (2) |
C4 | 0.0315 (18) | 0.053 (3) | 0.073 (3) | −0.0017 (18) | 0.0157 (19) | 0.001 (2) |
C5 | 0.047 (2) | 0.039 (2) | 0.047 (2) | 0.0029 (17) | 0.0149 (17) | −0.0075 (17) |
C6 | 0.0374 (19) | 0.054 (2) | 0.062 (2) | −0.0011 (18) | 0.0232 (18) | 0.000 (2) |
C7 | 0.0333 (18) | 0.063 (3) | 0.066 (3) | 0.0107 (19) | 0.0173 (18) | 0.001 (2) |
C8 | 0.053 (2) | 0.050 (2) | 0.053 (2) | 0.009 (2) | 0.0160 (19) | −0.0016 (19) |
C9 | 0.046 (2) | 0.049 (2) | 0.038 (2) | 0.0094 (18) | 0.0060 (16) | −0.0004 (17) |
C10 | 0.043 (2) | 0.062 (3) | 0.058 (3) | 0.005 (2) | −0.0011 (18) | −0.011 (2) |
C11 | 0.0334 (19) | 0.054 (3) | 0.077 (3) | 0.0040 (18) | 0.0197 (19) | −0.007 (2) |
C12 | 0.055 (2) | 0.059 (3) | 0.067 (3) | −0.002 (2) | 0.025 (2) | −0.006 (2) |
C13 | 0.072 (3) | 0.082 (4) | 0.093 (4) | 0.009 (3) | 0.045 (3) | 0.028 (3) |
C14 | 0.064 (3) | 0.085 (4) | 0.134 (5) | 0.019 (3) | 0.064 (3) | 0.038 (4) |
C15 | 0.059 (3) | 0.054 (3) | 0.155 (6) | −0.003 (2) | 0.057 (3) | 0.007 (4) |
C16 | 0.048 (3) | 0.057 (3) | 0.112 (4) | −0.002 (2) | 0.033 (3) | −0.015 (3) |
C17 | 0.048 (2) | 0.047 (2) | 0.0358 (19) | 0.0074 (17) | 0.0182 (16) | 0.0057 (16) |
C18 | 0.045 (2) | 0.052 (2) | 0.0399 (19) | 0.0053 (18) | 0.0133 (16) | 0.0107 (17) |
C19 | 0.048 (2) | 0.048 (2) | 0.0408 (19) | 0.003 (2) | 0.0095 (17) | 0.0096 (19) |
C20 | 0.043 (2) | 0.057 (3) | 0.057 (2) | 0.0073 (19) | 0.0209 (19) | 0.021 (2) |
C21 | 0.063 (3) | 0.069 (3) | 0.092 (3) | 0.015 (2) | 0.044 (3) | 0.021 (3) |
C22 | 0.081 (3) | 0.051 (3) | 0.067 (3) | 0.018 (2) | 0.048 (2) | 0.008 (2) |
C23 | 0.082 (3) | 0.044 (2) | 0.043 (2) | 0.009 (2) | 0.023 (2) | 0.0101 (19) |
C24 | 0.100 (4) | 0.064 (3) | 0.058 (3) | 0.013 (3) | 0.023 (3) | −0.017 (2) |
C25 | 0.124 (4) | 0.080 (4) | 0.107 (4) | 0.017 (3) | 0.084 (4) | 0.002 (3) |
C26 | 0.043 (2) | 0.067 (3) | 0.084 (3) | 0.004 (2) | 0.023 (2) | 0.029 (3) |
C27 | 0.102 (4) | 0.099 (4) | 0.099 (4) | −0.044 (4) | 0.013 (3) | 0.021 (3) |
C28 | 0.104 (4) | 0.119 (5) | 0.110 (5) | −0.030 (4) | 0.015 (4) | −0.032 (4) |
C29 | 0.132 (5) | 0.144 (6) | 0.085 (4) | 0.014 (5) | 0.020 (4) | −0.033 (4) |
Cl1—C29 | 1.712 (7) | C13—C14 | 1.347 (8) |
Cl2—C29 | 1.716 (6) | C13—H13 | 0.9300 |
O1—C2 | 1.372 (5) | C14—C15 | 1.364 (7) |
O1—C1 | 1.402 (6) | C14—H14 | 0.9300 |
O2—C19 | 1.218 (4) | C15—C16 | 1.389 (7) |
O3—C26 | 1.197 (5) | C15—H15 | 0.9300 |
O4—C26 | 1.328 (5) | C16—H16 | 0.9300 |
O4—C27 | 1.470 (6) | C17—C18 | 1.511 (5) |
N1—C19 | 1.364 (4) | C17—C23 | 1.517 (5) |
N1—C8 | 1.456 (5) | C17—H17 | 0.9800 |
N1—C9 | 1.470 (5) | C18—C19 | 1.486 (5) |
C1—H1A | 0.9600 | C18—C20 | 1.512 (5) |
C1—H1C | 0.9600 | C18—H18 | 0.9800 |
C1—H1B | 0.9600 | C20—C26 | 1.513 (6) |
C2—C7 | 1.371 (5) | C20—C21 | 1.531 (6) |
C2—C3 | 1.381 (5) | C20—H20 | 0.9800 |
C3—C4 | 1.368 (5) | C21—C22 | 1.510 (7) |
C3—H3 | 0.9300 | C21—H21B | 0.9700 |
C4—C5 | 1.389 (5) | C21—H21A | 0.9700 |
C4—H4 | 0.9300 | C22—C23 | 1.329 (6) |
C5—C6 | 1.369 (5) | C22—C25 | 1.513 (6) |
C5—C8 | 1.509 (5) | C23—C24 | 1.495 (6) |
C6—C7 | 1.382 (5) | C24—H24B | 0.9600 |
C6—H6 | 0.9300 | C24—H24C | 0.9600 |
C7—H7 | 0.9300 | C24—H24A | 0.9600 |
C8—H8B | 0.9700 | C25—H25B | 0.9600 |
C8—H8A | 0.9700 | C25—H25C | 0.9600 |
C9—C10 | 1.522 (5) | C25—H25A | 0.9600 |
C9—C17 | 1.532 (5) | C27—C28 | 1.435 (8) |
C9—H9 | 0.9800 | C27—H27B | 0.9700 |
C10—C11 | 1.522 (6) | C27—H27A | 0.9700 |
C10—H10B | 0.9700 | C28—H28C | 0.9600 |
C10—H10A | 0.9700 | C28—H28B | 0.9600 |
C11—C12 | 1.385 (6) | C28—H28A | 0.9600 |
C11—C16 | 1.394 (6) | C29—H29A | 0.9700 |
C12—C13 | 1.380 (6) | C29—H29B | 0.9700 |
C12—H12 | 0.9300 | ||
C2—O1—C1 | 117.6 (4) | C18—C17—C9 | 102.2 (3) |
C26—O4—C27 | 116.8 (4) | C23—C17—C9 | 122.3 (3) |
C19—N1—C8 | 122.2 (3) | C18—C17—H17 | 107.0 |
C19—N1—C9 | 113.3 (3) | C23—C17—H17 | 107.0 |
C8—N1—C9 | 122.3 (3) | C9—C17—H17 | 107.0 |
O1—C1—H1A | 109.5 | C19—C18—C17 | 103.6 (3) |
O1—C1—H1C | 109.5 | C19—C18—C20 | 120.5 (3) |
H1A—C1—H1C | 109.5 | C17—C18—C20 | 110.6 (3) |
O1—C1—H1B | 109.5 | C19—C18—H18 | 107.1 |
H1A—C1—H1B | 109.5 | C17—C18—H18 | 107.1 |
H1C—C1—H1B | 109.5 | C20—C18—H18 | 107.1 |
C7—C2—O1 | 125.0 (3) | O2—C19—N1 | 124.8 (4) |
C7—C2—C3 | 119.5 (3) | O2—C19—C18 | 128.6 (3) |
O1—C2—C3 | 115.5 (3) | N1—C19—C18 | 106.5 (3) |
C4—C3—C2 | 120.6 (4) | C18—C20—C26 | 111.6 (3) |
C4—C3—H3 | 119.7 | C18—C20—C21 | 107.2 (3) |
C2—C3—H3 | 119.7 | C26—C20—C21 | 110.6 (3) |
C3—C4—C5 | 120.7 (3) | C18—C20—H20 | 109.1 |
C3—C4—H4 | 119.6 | C26—C20—H20 | 109.1 |
C5—C4—H4 | 119.6 | C21—C20—H20 | 109.1 |
C6—C5—C4 | 117.7 (3) | C22—C21—C20 | 116.1 (3) |
C6—C5—C8 | 121.3 (3) | C22—C21—H21B | 108.3 |
C4—C5—C8 | 120.9 (3) | C20—C21—H21B | 108.3 |
C5—C6—C7 | 122.2 (3) | C22—C21—H21A | 108.3 |
C5—C6—H6 | 118.9 | C20—C21—H21A | 108.3 |
C7—C6—H6 | 118.9 | H21B—C21—H21A | 107.4 |
C2—C7—C6 | 119.2 (3) | C23—C22—C21 | 124.7 (4) |
C2—C7—H7 | 120.4 | C23—C22—C25 | 124.0 (5) |
C6—C7—H7 | 120.4 | C21—C22—C25 | 111.3 (4) |
N1—C8—C5 | 112.8 (3) | C22—C23—C24 | 125.0 (4) |
N1—C8—H8B | 109.0 | C22—C23—C17 | 117.8 (4) |
C5—C8—H8B | 109.0 | C24—C23—C17 | 117.1 (4) |
N1—C8—H8A | 109.0 | C23—C24—H24B | 109.5 |
C5—C8—H8A | 109.0 | C23—C24—H24C | 109.5 |
H8B—C8—H8A | 107.8 | H24B—C24—H24C | 109.5 |
N1—C9—C10 | 113.0 (3) | C23—C24—H24A | 109.5 |
N1—C9—C17 | 100.3 (3) | H24B—C24—H24A | 109.5 |
C10—C9—C17 | 118.0 (3) | H24C—C24—H24A | 109.5 |
N1—C9—H9 | 108.3 | C22—C25—H25B | 109.5 |
C10—C9—H9 | 108.3 | C22—C25—H25C | 109.5 |
C17—C9—H9 | 108.3 | H25B—C25—H25C | 109.5 |
C11—C10—C9 | 117.1 (3) | C22—C25—H25A | 109.5 |
C11—C10—H10B | 108.0 | H25B—C25—H25A | 109.5 |
C9—C10—H10B | 108.0 | H25C—C25—H25A | 109.5 |
C11—C10—H10A | 108.0 | O3—C26—O4 | 123.2 (4) |
C9—C10—H10A | 108.0 | O3—C26—C20 | 124.3 (4) |
H10B—C10—H10A | 107.3 | O4—C26—C20 | 112.4 (4) |
C12—C11—C16 | 117.6 (4) | C28—C27—O4 | 109.4 (5) |
C12—C11—C10 | 122.4 (4) | C28—C27—H27B | 109.8 |
C16—C11—C10 | 120.0 (4) | O4—C27—H27B | 109.8 |
C13—C12—C11 | 120.5 (5) | C28—C27—H27A | 109.8 |
C13—C12—H12 | 119.8 | O4—C27—H27A | 109.8 |
C11—C12—H12 | 119.8 | H27B—C27—H27A | 108.2 |
C14—C13—C12 | 121.4 (6) | C27—C28—H28C | 109.5 |
C14—C13—H13 | 119.3 | C27—C28—H28B | 109.5 |
C12—C13—H13 | 119.3 | H28C—C28—H28B | 109.5 |
C13—C14—C15 | 119.7 (5) | C27—C28—H28A | 109.5 |
C13—C14—H14 | 120.1 | H28C—C28—H28A | 109.5 |
C15—C14—H14 | 120.1 | H28B—C28—H28A | 109.5 |
C14—C15—C16 | 120.2 (5) | Cl1—C29—Cl2 | 111.8 (4) |
C14—C15—H15 | 119.9 | Cl1—C29—H29A | 109.3 |
C16—C15—H15 | 119.9 | Cl2—C29—H29A | 109.3 |
C15—C16—C11 | 120.6 (5) | Cl1—C29—H29B | 109.3 |
C15—C16—H16 | 119.7 | Cl2—C29—H29B | 109.3 |
C11—C16—H16 | 119.7 | H29A—C29—H29B | 107.9 |
C18—C17—C23 | 110.4 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C29—H29B···O2i | 0.97 | 2.42 | 3.313 (7) | 153 |
C6—H6···O3ii | 0.93 | 2.65 | 3.562 (5) | 166 |
Symmetry codes: (i) x, y, z+1; (ii) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C28H33NO4·CH2Cl2 |
Mr | 532.48 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 293 |
a, b, c (Å) | 9.6864 (5), 15.5706 (8), 9.7460 (6) |
β (°) | 109.221 (7) |
V (Å3) | 1387.99 (14) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.27 |
Crystal size (mm) | 0.32 × 0.26 × 0.23 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur (Atlas, Gemini ultra) diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2011) |
Tmin, Tmax | 0.919, 0.941 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6260, 3844, 2990 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.602 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.127, 1.07 |
No. of reflections | 3844 |
No. of parameters | 330 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.26, −0.22 |
Absolute structure | Flack (1983), 1789 Friedel pairs |
Absolute structure parameter | −0.05 (11) |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2011), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), OLEX2 (Dolomanov et al., 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C29—H29B···O2i | 0.97 | 2.42 | 3.313 (7) | 153 |
C6—H6···O3ii | 0.93 | 2.65 | 3.562 (5) | 166 |
Symmetry codes: (i) x, y, z+1; (ii) x+1, y, z. |
Acknowledgements
This work was supported by a research grant from the Natural Science Foundation of China (grant No. 21172191). The authors gratefully acknowledge Mr Jiyong Liu and Jianming Gu of Zhejiang University for their kind assistance in the
analysis and for useful dicussions.References
Cox, R. H., Cutler, H. G., Hurd, R. E. & Cole, R. J. (1983). J. Agric. Food Chem. 31, 405-408. CrossRef CAS Web of Science Google Scholar
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The scaffold of isoindolin-1-ones have derived many natural products and have great research values, such as cytochalasins (Liu et al. , 2006; Cox et al., 1983). In our total synthesis of cytochalasin Z8, we have obtained the title compound as a major product through intramolecular Diels-Alder reaction. The structure of the title compound has been characterized by spectroscopic methods and further confirmation by X-ray analysis. The molecule has four rings including two benzene rings and one pyrrolidone ring and one cyclohexene ring and has four stereogenic centers as indicated absolute stereoconfiguration. We report here its crystal structure (Fig. 1). In the crystals of the title compound, the pyrrolidone ring C9/C17-C19/N1 adopts twisted envelope conformation, whereas the cyclohexene ring C17-C18/C20-C23 has a half chair conformation. The crystal packing (Fig. 2) is stabilized by two weak non-classical intermolecular C—H···O hydrogen bonds, the first one between H atom of dichloromethane and the carbonyl oxygen of the pyrrolidone, with a C29—H29B···O2i, and the second one between the H atom on the benzene ring of methoxybenzyl group and the carbonyl oxygen of the carboxylate group, with C6—H6···O3ii, respectively (Table 1).