metal-organic compounds
trans-Dibromidobis(3-methylpyridine-κN)copper(II)
aDepartment of Chemistry, The University of Jordan, Amman 11942, Jordan
*Correspondence e-mail: f.awwadi@ju.edu.jo
The 2(C6H7N)2], contains one half-molecule, the whole molecule being generated by inversion through a center located at the CuII atom. The geometry around the CuII atom is square planar. Semicoordinate Cu⋯Br bonds [3.269 (1) Å] and nonclassical C—H⋯Br hydrogen bonds connect the molecules, forming chains running parallel to the a axis. These chains are further linked via additional C—H⋯Br hydrogen bonds into a three-dimensional network.
of the title compound, [CuBrRelated literature
The title compound was prepared to investigate chloro-methyl and bromo-methyl exchange rules in the crystal structures of [Cu(3YP)2Br2] complexes (where 3YP = 3-substituted pyridine and Y = Cl, Br and methyl), see: Awwadi et al. (2006, 2011). Desiraju showed that the chloro-methyl exchange rule is obeyed if the final structure is stabilized by dispersive forces, see: Desiraju & Sarma (1986). For related structures, see: Marsh et al. (1981, 1982); Singh et al. (1972).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2002); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536813001414/lr2097sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813001414/lr2097Isup2.hkl
2 mmol of 3-methylpyridine were dissolved in 20 mL of acetonitrile. One mmol of CuBr2 was dissolved in 20 mL of acetonitrile. The two solutions were mixed. The resulting solution was gently heated with stirring for 15 minutes. The solution was filtered and left to slowly evaporate at the room temperature. Green crystals with a needle habit were formed. One of these crystals was used for single-crystal X-ray data collection.
The structure was solved by
and refined by least squares method on F2 using the SHELXTL program package. The structure was solved in the P2(1)/c (# 14) by analysis of All atoms were refined anisotropically. Hydrogen atoms were placed at the calculated positions using a riding model with C(aromatic)—H = 0.95 Å and Uiso(H) = 1.2Ueq(C), and with C(aliphatic)—H = 0.98 Å and Uiso(H) = 1.5Ueq(C).Data collection: SMART (Bruker, 2002); cell
SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[CuBr2(C6H7N)2] | F(000) = 398 |
Mr = 409.61 | Dx = 2.020 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2369 reflections |
a = 4.0171 (8) Å | θ = 2.2–29.8° |
b = 14.105 (3) Å | µ = 7.53 mm−1 |
c = 11.899 (2) Å | T = 85 K |
β = 92.54 (3)° | Needle, green |
V = 673.5 (2) Å3 | 0.24 × 0.03 × 0.03 mm |
Z = 2 |
Bruker/Siemens SMART APEX diffractometer | 1536 independent reflections |
Radiation source: normal-focus sealed tube | 1283 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.044 |
Detector resolution: 8.3 pixels mm-1 | θmax = 27.5°, θmin = 2.9° |
ω scans | h = −5→4 |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | k = −16→18 |
Tmin = 0.265, Tmax = 0.806 | l = −14→15 |
5995 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.075 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0388P)2] where P = (Fo2 + 2Fc2)/3 |
1536 reflections | (Δ/σ)max < 0.001 |
80 parameters | Δρmax = 0.97 e Å−3 |
0 restraints | Δρmin = −0.47 e Å−3 |
[CuBr2(C6H7N)2] | V = 673.5 (2) Å3 |
Mr = 409.61 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 4.0171 (8) Å | µ = 7.53 mm−1 |
b = 14.105 (3) Å | T = 85 K |
c = 11.899 (2) Å | 0.24 × 0.03 × 0.03 mm |
β = 92.54 (3)° |
Bruker/Siemens SMART APEX diffractometer | 1536 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 1283 reflections with I > 2σ(I) |
Tmin = 0.265, Tmax = 0.806 | Rint = 0.044 |
5995 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.075 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.97 e Å−3 |
1536 reflections | Δρmin = −0.47 e Å−3 |
80 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.12621 (8) | 0.03733 (3) | 0.83940 (3) | 0.01337 (12) | |
Cu1 | 0.5000 | 0.0000 | 1.0000 | 0.01824 (18) | |
N1 | 0.5100 (7) | 0.1368 (2) | 1.0454 (2) | 0.0154 (7) | |
C2 | 0.6317 (9) | 0.2051 (3) | 0.9789 (3) | 0.0158 (8) | |
H2 | 0.7116 | 0.1869 | 0.9081 | 0.019* | |
C3 | 0.6464 (9) | 0.2998 (3) | 1.0082 (3) | 0.0153 (8) | |
C4 | 0.5247 (9) | 0.3257 (3) | 1.1112 (3) | 0.0165 (8) | |
H4 | 0.5317 | 0.3899 | 1.1350 | 0.020* | |
C5 | 0.3921 (9) | 0.2560 (3) | 1.1791 (3) | 0.0163 (8) | |
H5 | 0.3024 | 0.2725 | 1.2490 | 0.020* | |
C6 | 0.3925 (8) | 0.1636 (3) | 1.1440 (3) | 0.0160 (8) | |
H6 | 0.3057 | 0.1165 | 1.1916 | 0.019* | |
C7 | 0.7889 (9) | 0.3717 (3) | 0.9301 (3) | 0.0211 (9) | |
H7A | 0.8971 | 0.3389 | 0.8690 | 0.032* | |
H7B | 0.9531 | 0.4110 | 0.9719 | 0.032* | |
H7C | 0.6094 | 0.4120 | 0.8986 | 0.032* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0162 (2) | 0.0089 (2) | 0.01488 (19) | −0.00020 (14) | −0.00062 (13) | 0.00010 (13) |
Cu1 | 0.0286 (4) | 0.0059 (3) | 0.0194 (3) | 0.0034 (3) | −0.0089 (3) | −0.0029 (2) |
N1 | 0.0213 (16) | 0.0084 (17) | 0.0160 (15) | 0.0025 (12) | −0.0051 (12) | −0.0015 (11) |
C2 | 0.0178 (19) | 0.015 (2) | 0.0144 (17) | 0.0028 (15) | −0.0028 (14) | −0.0033 (14) |
C3 | 0.0138 (19) | 0.012 (2) | 0.0199 (19) | −0.0013 (14) | −0.0027 (14) | 0.0015 (14) |
C4 | 0.019 (2) | 0.0076 (19) | 0.0221 (19) | −0.0002 (15) | −0.0038 (15) | −0.0030 (14) |
C5 | 0.0191 (18) | 0.017 (2) | 0.0132 (18) | 0.0000 (15) | 0.0024 (14) | −0.0019 (14) |
C6 | 0.0156 (19) | 0.013 (2) | 0.0193 (19) | −0.0044 (14) | −0.0007 (15) | 0.0010 (14) |
C7 | 0.024 (2) | 0.016 (2) | 0.023 (2) | −0.0033 (16) | 0.0020 (16) | 0.0028 (15) |
Br1—Cu1 | 2.4351 (8) | C3—C7 | 1.506 (5) |
Cu1—N1i | 2.004 (3) | C4—C5 | 1.393 (5) |
Cu1—N1 | 2.004 (3) | C4—H4 | 0.9500 |
Cu1—Br1i | 2.4351 (8) | C5—C6 | 1.369 (5) |
N1—C6 | 1.338 (4) | C5—H5 | 0.9500 |
N1—C2 | 1.351 (5) | C6—H6 | 0.9500 |
C2—C3 | 1.382 (5) | C7—H7A | 0.9800 |
C2—H2 | 0.9500 | C7—H7B | 0.9800 |
C3—C4 | 1.388 (5) | C7—H7C | 0.9800 |
N1i—Cu1—N1 | 180.000 (1) | C3—C4—C5 | 119.0 (4) |
N1i—Cu1—Br1 | 89.57 (8) | C3—C4—H4 | 120.5 |
N1—Cu1—Br1 | 90.43 (8) | C5—C4—H4 | 120.5 |
N1i—Cu1—Br1i | 90.43 (8) | C6—C5—C4 | 119.3 (3) |
N1—Cu1—Br1i | 89.57 (8) | C6—C5—H5 | 120.4 |
Br1—Cu1—Br1i | 180.0 | C4—C5—H5 | 120.4 |
C6—N1—C2 | 117.6 (3) | N1—C6—C5 | 122.8 (3) |
C6—N1—Cu1 | 120.3 (3) | N1—C6—H6 | 118.6 |
C2—N1—Cu1 | 122.1 (2) | C5—C6—H6 | 118.6 |
N1—C2—C3 | 123.6 (3) | C3—C7—H7A | 109.5 |
N1—C2—H2 | 118.2 | C3—C7—H7B | 109.5 |
C3—C2—H2 | 118.2 | H7A—C7—H7B | 109.5 |
C2—C3—C4 | 117.7 (3) | C3—C7—H7C | 109.5 |
C2—C3—C7 | 120.6 (3) | H7A—C7—H7C | 109.5 |
C4—C3—C7 | 121.8 (3) | H7B—C7—H7C | 109.5 |
Br1—Cu1—N1—C6 | 117.1 (2) | N1—C2—C3—C7 | 179.4 (3) |
Br1i—Cu1—N1—C6 | −62.9 (2) | C2—C3—C4—C5 | −0.6 (5) |
Br1—Cu1—N1—C2 | −62.5 (3) | C7—C3—C4—C5 | 179.2 (3) |
Br1i—Cu1—N1—C2 | 117.5 (3) | C3—C4—C5—C6 | 1.6 (5) |
C6—N1—C2—C3 | 1.2 (5) | C2—N1—C6—C5 | −0.1 (5) |
Cu1—N1—C2—C3 | −179.1 (3) | Cu1—N1—C6—C5 | −179.8 (3) |
N1—C2—C3—C4 | −0.9 (5) | C4—C5—C6—N1 | −1.3 (5) |
Symmetry code: (i) −x+1, −y, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···Br1ii | 0.95 | 2.83 | 3.549 (4) | 133 |
C6—H6···Br1iii | 0.95 | 2.79 | 3.529 (4) | 135 |
C5—H5···Br1iv | 0.95 | 2.99 | 3.668 (4) | 130 |
Symmetry codes: (ii) x+1, y, z; (iii) −x, −y, −z+2; (iv) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [CuBr2(C6H7N)2] |
Mr | 409.61 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 85 |
a, b, c (Å) | 4.0171 (8), 14.105 (3), 11.899 (2) |
β (°) | 92.54 (3) |
V (Å3) | 673.5 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 7.53 |
Crystal size (mm) | 0.24 × 0.03 × 0.03 |
Data collection | |
Diffractometer | Bruker/Siemens SMART APEX diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.265, 0.806 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5995, 1536, 1283 |
Rint | 0.044 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.075, 1.01 |
No. of reflections | 1536 |
No. of parameters | 80 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.97, −0.47 |
Computer programs: SMART (Bruker, 2002), SAINT-Plus (Bruker, 2001), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···Br1i | 0.95 | 2.831 | 3.549 (4) | 133.10 |
C6—H6···Br1ii | 0.95 | 2.792 | 3.529 (4) | 135.02 |
C5—H5···Br1iii | 0.95 | 2.987 | 3.668 (4) | 129.76 |
Symmetry codes: (i) x+1, y, z; (ii) −x, −y, −z+2; (iii) x, −y+1/2, z+1/2. |
Acknowledgements
The author thanks Brendan Twamley for collecting the X-ray diffraction data set.
References
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The molecular units (Fig. 1) of the title compound are linked via Cu···Br semi-coordinate bonds to form a chain structure that runs parallel to the a-axis (Fig. 2). These chains are reinforced by C6—H6···Br1 and C2—H2···Br1 hydrogen bonding interactions. The data summarizing these interactions are shown in Table 1. These chains are interlinked using non-classical C5—H5···Br1 hydrogen bonding interactions to form the final three dimensional structure (Fig. 3).
Cu(4MP)2Cl2, (Marsh et al., 1981), where 4MP is 4-methylpyridine, forms an extended chain structure based on the Cu···Cl semi coordinate bond, similar to the title compound. In contrast, Cu(2MP)2X2, 2MP = 2-methylpyridine and X = Cl or Br, form a dimer structure based on the Cu···X semi coordinate bond (Singh et al., 1972 and Marsh et al., 1982).
The title compound was prepared to investigate chloro-methyl and bromo-methyl exchange rules in the crystal structures of Cu(3YP)2Br2 complexes, where 3YP = 3-substituted pyridine and Y = Cl, Br and methyl (Awwadi et al., 2006 and Awwadi et al., 2011). These three compounds are isostructural in the solid state, hence, the halo-methyl exchange rule is not violated. Desiraju showed that the chloro-methyl exchange rule is obeyed if the final structure is stabilized by dispersive forces (Desiraju & Sarma, 1986). This indicates that the Cu···Br semi-coordinate bonds play the crucial role in determining the final structure of these compounds. The volume of the methyl group is ca 24 Å3 which is in between the volume of chlorine (ca 19 Å3) and bromine (ca 27 Å3). In contrast, if directional forces are involved, the chloro-methyl exchange rule is violated.