metal-organic compounds
catena-Poly[[bis(4-methylpyridine-κN)cobalt(II)]-di-μ-dicyanamido-κ2N1:N5]
aInstitute of Molecular Engineering and Advanced Materials, School of Chemical Engineering, Nanjing University of Science and Technology, 200 Xiaolingwei, Nanjing 210094, Jiangsu, People's Republic of China, and bInstitute of Science and Technology, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, People's Republic of China
*Correspondence e-mail: chizhang@mail.njust.edu.cn
Cobalt(II) nitrate hexahydrate and sodium dicyanamide self-assembled in dimethylformamide (DMF) and 4-methylpyridine solutions to form the title compound, [Co(C2N3)2(C6H7N)2]n. The Co2+ ion lies on an inversion center and adopts an octahedral coordination geometry in which four N atoms from four different dicyanamide ligands lie in the equatorial plane and two 4-methylpyridine N atoms occupy the axial positions. The CoII atoms are connected by two bridging dicyanamide ligands, resulting in a chain parallel to the c axis. The chains are connected into a three-dimensional network by C—H⋯N hydrogen bonds.
Related literature
The design and syntheses of metal-organic compounds has attracted great attention not only as a result of their intriguing architectures and topologies (Eddaoudi et al., 2001), but also because of their potential applications (Banerjee et al., 2008).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2008); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536812051252/rz5034sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536812051252/rz5034Isup2.hkl
Co(NO3)2?6H2O (116.6 mg, 0.4 mmol) was added into 1 ml dmf with thorough stir for 5 minutes. After filtration, the purple filtrate was carefully laid on the surface with the solution of NaN(CN)2 (89.1 mg, 1 mmol) in 1 ml dmf, 1 ml 4-methylpyridine and 5 ml i-PrOH. Pink block crystals were obtained after two weeks.
H atoms were positioned geometrically and refined with riding model, with Uiso = 1.5Ueq and 1.2Ueq for methyl and pyridyl H atoms, respectively. The C—H bonds are 0.96 Å in methyl and 0.93 Å in pyridyl.
Data collection: CrystalClear (Rigaku, 2008); cell
CrystalClear (Rigaku, 2008); data reduction: CrystalClear (Rigaku, 2008); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Portion of the polymeric chain of the title compound, with 30% probability displacement ellipsoids. All H atoms have been omitted. Symmetry code: (i) 2-x, -y, 1-z. |
[Co(C2N3)2(C6H7N)2] | F(000) = 386 |
Mr = 377.28 | Dx = 1.463 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3521 reflections |
a = 9.3686 (19) Å | θ = 3.1–28.7° |
b = 13.080 (3) Å | µ = 1.02 mm−1 |
c = 7.3048 (15) Å | T = 150 K |
β = 106.86 (3)° | Block, pink |
V = 856.7 (3) Å3 | 0.21 × 0.17 × 0.15 mm |
Z = 2 |
Rigaku Saturn724+ diffractometer | 1549 independent reflections |
Radiation source: fine-focus sealed tube | 1419 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.016 |
ω scans | θmax = 25.4°, θmin = 3.3° |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008) | h = −10→11 |
Tmin = 0.815, Tmax = 1.000 | k = −12→15 |
4994 measured reflections | l = −8→8 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.085 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0483P)2 + 0.6117P] where P = (Fo2 + 2Fc2)/3 |
1549 reflections | (Δ/σ)max < 0.001 |
115 parameters | Δρmax = 0.94 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
[Co(C2N3)2(C6H7N)2] | V = 856.7 (3) Å3 |
Mr = 377.28 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.3686 (19) Å | µ = 1.02 mm−1 |
b = 13.080 (3) Å | T = 150 K |
c = 7.3048 (15) Å | 0.21 × 0.17 × 0.15 mm |
β = 106.86 (3)° |
Rigaku Saturn724+ diffractometer | 1549 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008) | 1419 reflections with I > 2σ(I) |
Tmin = 0.815, Tmax = 1.000 | Rint = 0.016 |
4994 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 0 restraints |
wR(F2) = 0.085 | H-atom parameters constrained |
S = 1.07 | Δρmax = 0.94 e Å−3 |
1549 reflections | Δρmin = −0.26 e Å−3 |
115 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Co1 | 1.0000 | 0.0000 | 0.5000 | 0.01854 (16) | |
N1 | 0.86523 (19) | −0.07208 (14) | 0.6510 (3) | 0.0262 (4) | |
N2 | 0.87457 (19) | −0.07142 (14) | 1.2428 (2) | 0.0249 (4) | |
N3 | 0.76592 (19) | −0.12944 (15) | 0.9113 (2) | 0.0275 (4) | |
N4 | 0.85008 (18) | 0.12713 (13) | 0.4394 (2) | 0.0213 (4) | |
C1 | 0.8228 (2) | −0.09665 (15) | 0.7775 (3) | 0.0203 (4) | |
C2 | 0.8276 (2) | −0.09642 (15) | 1.0853 (3) | 0.0194 (4) | |
C3 | 0.7023 (2) | 0.11338 (17) | 0.3732 (3) | 0.0274 (5) | |
H3B | 0.6656 | 0.0469 | 0.3562 | 0.033* | |
C4 | 0.6022 (2) | 0.19299 (18) | 0.3293 (3) | 0.0315 (5) | |
H4A | 0.5006 | 0.1796 | 0.2828 | 0.038* | |
C5 | 0.6525 (2) | 0.29340 (17) | 0.3544 (3) | 0.0287 (5) | |
C6 | 0.5461 (3) | 0.3821 (2) | 0.3074 (4) | 0.0420 (6) | |
H6A | 0.4458 | 0.3570 | 0.2615 | 0.063* | |
H6B | 0.5682 | 0.4235 | 0.2105 | 0.063* | |
H6C | 0.5566 | 0.4225 | 0.4203 | 0.063* | |
C7 | 0.8053 (2) | 0.30713 (17) | 0.4229 (3) | 0.0301 (5) | |
H7A | 0.8448 | 0.3728 | 0.4420 | 0.036* | |
C8 | 0.8989 (2) | 0.22389 (16) | 0.4628 (3) | 0.0261 (5) | |
H8A | 1.0010 | 0.2353 | 0.5083 | 0.031* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0207 (2) | 0.0195 (2) | 0.0153 (2) | −0.00038 (14) | 0.00501 (16) | −0.00061 (14) |
N1 | 0.0278 (9) | 0.0278 (10) | 0.0236 (9) | −0.0027 (7) | 0.0086 (8) | 0.0009 (8) |
N2 | 0.0263 (9) | 0.0267 (9) | 0.0206 (10) | −0.0019 (7) | 0.0053 (7) | −0.0036 (7) |
N3 | 0.0242 (9) | 0.0401 (11) | 0.0181 (9) | −0.0131 (8) | 0.0059 (7) | −0.0038 (8) |
N4 | 0.0218 (8) | 0.0219 (9) | 0.0198 (9) | −0.0009 (7) | 0.0053 (7) | −0.0008 (7) |
C1 | 0.0169 (9) | 0.0205 (10) | 0.0201 (10) | −0.0007 (7) | 0.0001 (8) | −0.0034 (8) |
C2 | 0.0167 (9) | 0.0191 (9) | 0.0227 (11) | −0.0006 (7) | 0.0064 (8) | 0.0021 (8) |
C3 | 0.0241 (10) | 0.0258 (11) | 0.0309 (12) | −0.0044 (8) | 0.0056 (9) | −0.0032 (9) |
C4 | 0.0193 (10) | 0.0349 (12) | 0.0386 (13) | −0.0010 (9) | 0.0055 (9) | −0.0012 (10) |
C5 | 0.0285 (11) | 0.0283 (12) | 0.0285 (11) | 0.0055 (9) | 0.0072 (9) | 0.0017 (9) |
C6 | 0.0370 (13) | 0.0372 (14) | 0.0511 (16) | 0.0127 (11) | 0.0118 (12) | 0.0034 (12) |
C7 | 0.0309 (11) | 0.0213 (11) | 0.0382 (13) | −0.0014 (9) | 0.0102 (10) | −0.0010 (9) |
C8 | 0.0217 (10) | 0.0250 (11) | 0.0306 (12) | −0.0024 (8) | 0.0062 (9) | −0.0005 (9) |
Co1—N2i | 2.1219 (18) | C3—C4 | 1.376 (3) |
Co1—N2ii | 2.1219 (18) | C3—H3B | 0.9300 |
Co1—N1iii | 2.1229 (18) | C4—C5 | 1.389 (3) |
Co1—N1 | 2.1229 (18) | C4—H4A | 0.9300 |
Co1—N4 | 2.1385 (17) | C5—C7 | 1.384 (3) |
Co1—N4iii | 2.1385 (17) | C5—C6 | 1.503 (3) |
N1—C1 | 1.152 (3) | C6—H6A | 0.9600 |
N2—C2 | 1.153 (3) | C6—H6B | 0.9600 |
N2—Co1iv | 2.1219 (18) | C6—H6C | 0.9600 |
N3—C2 | 1.308 (3) | C7—C8 | 1.375 (3) |
N3—C1 | 1.314 (3) | C7—H7A | 0.9300 |
N4—C8 | 1.340 (3) | C8—H8A | 0.9300 |
N4—C3 | 1.340 (3) | ||
N2i—Co1—N2ii | 180.00 (7) | N2—C2—N3 | 175.1 (2) |
N2i—Co1—N1iii | 89.76 (7) | N4—C3—C4 | 123.1 (2) |
N2ii—Co1—N1iii | 90.24 (7) | N4—C3—H3B | 118.5 |
N2i—Co1—N1 | 90.24 (7) | C4—C3—H3B | 118.5 |
N2ii—Co1—N1 | 89.76 (7) | C3—C4—C5 | 120.2 (2) |
N1iii—Co1—N1 | 180.00 (9) | C3—C4—H4A | 119.9 |
N2i—Co1—N4 | 89.84 (7) | C5—C4—H4A | 119.9 |
N2ii—Co1—N4 | 90.16 (7) | C7—C5—C4 | 116.5 (2) |
N1iii—Co1—N4 | 90.06 (7) | C7—C5—C6 | 122.0 (2) |
N1—Co1—N4 | 89.94 (7) | C4—C5—C6 | 121.5 (2) |
N2i—Co1—N4iii | 90.16 (7) | C5—C6—H6A | 109.5 |
N2ii—Co1—N4iii | 89.84 (7) | C5—C6—H6B | 109.5 |
N1iii—Co1—N4iii | 89.94 (7) | H6A—C6—H6B | 109.5 |
N1—Co1—N4iii | 90.06 (7) | C5—C6—H6C | 109.5 |
N4—Co1—N4iii | 180.0 | H6A—C6—H6C | 109.5 |
C1—N1—Co1 | 159.33 (16) | H6B—C6—H6C | 109.5 |
C2—N2—Co1iv | 163.96 (16) | C8—C7—C5 | 120.2 (2) |
C2—N3—C1 | 117.09 (17) | C8—C7—H7A | 119.9 |
C8—N4—C3 | 116.84 (18) | C5—C7—H7A | 119.9 |
C8—N4—Co1 | 121.94 (13) | N4—C8—C7 | 123.2 (2) |
C3—N4—Co1 | 121.22 (14) | N4—C8—H8A | 118.4 |
N1—C1—N3 | 175.1 (2) | C7—C8—H8A | 118.4 |
Symmetry codes: (i) x, y, z−1; (ii) −x+2, −y, −z+2; (iii) −x+2, −y, −z+1; (iv) x, y, z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4A···N3v | 0.93 | 2.57 | 3.487 (3) | 168 |
Symmetry code: (v) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Co(C2N3)2(C6H7N)2] |
Mr | 377.28 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 150 |
a, b, c (Å) | 9.3686 (19), 13.080 (3), 7.3048 (15) |
β (°) | 106.86 (3) |
V (Å3) | 856.7 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.02 |
Crystal size (mm) | 0.21 × 0.17 × 0.15 |
Data collection | |
Diffractometer | Rigaku Saturn724+ diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2008) |
Tmin, Tmax | 0.815, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4994, 1549, 1419 |
Rint | 0.016 |
(sin θ/λ)max (Å−1) | 0.602 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.085, 1.07 |
No. of reflections | 1549 |
No. of parameters | 115 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.94, −0.26 |
Computer programs: CrystalClear (Rigaku, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4A···N3i | 0.93 | 2.57 | 3.487 (3) | 167.5 |
Symmetry code: (i) −x+1, −y, −z+1. |
Acknowledgements
This work was supported by the National Natural Science Foundation of China (No. 50472048) and the Program for New Century Excellent Talents in Universities (NCET-05–0499).
References
Banerjee, R., Phan, A., Wang, B., Knobler, C., Furukawa, H., O'Keeffe, M. & Yaghi, O. M. (2008). Science, 319, 939–943. Web of Science CSD CrossRef PubMed CAS Google Scholar
Eddaoudi, M., Moler, D. B., Li, H. L., Chen, B. L., Reineke, T. M., O'Keeffe, M. & Yaghi, O. M. (2001). Acc. Chem. Res. 34, 319–330. Web of Science CrossRef PubMed CAS Google Scholar
Rigaku (2008). CrystalClear. Rigaku Corp., Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The design and syntheses of metal-organic compounds have attracted great attention in recent years because of not only their intriguing architectures and topologies (Eddaoudi et al., 2001) but also their potential applications (Banerjee et al., 2008). The title compound {Co[N(CN)2]2(NC6H7)2}n is constructed by the flexible dicyanamide bridging ligands through diffusion reaction.
As illustrated in Fig. 1, Co2+ ion lies on an inversion center and adopts an octahedral coordination geometry, where four N atoms from four different dicyanamide ligands lie in the equatorial plane and two 4-methylpyridine N atoms occupy the axial positions. The Co atoms are connected by two dicyanamide ligands, resulting in a neutral chain along the c-axis. In the crystal, the chains are linked by C—H···N hydrogen bonds (Table 1) into a three-dimensional network.