organic compounds
(E)-2-Methoxy-N′-(2,4,6-trihydroxybenzylidene)benzohydrazide
aAtta-ur-Rahman Institute for Natural Product Discovery, Universiti Teknologi MARA (UiTM), Puncak Alam Campus, 42300 Bandar Puncak Alam, Selangor D. E. Malaysia, bFaculty of Applied Science, Universiti Teknologi MARA (UiTM), 40450 Shah Alam, Selangor D. E. Malaysia, cDepartment of Pharmacology and Chemistry, Faculty of Pharmacy, Universiti Teknologi MARA (UiTM), Puncak Alam Campus, 42300 Puncak Alam, Selangor D. E., Malaysia, and dH.E.J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi 75270, Pakistan
*Correspondence e-mail: dr.sammer.yousuf@gmail.com
In the title hydrazone derivative, C15H14N2O5, the benzene rings are twisted by 7.55 (8)° with respect to each other. The azomethine double bond adopts an E conformation. The molecular structure is stabilized by intramolecular O—H⋯N and N—H⋯O hydrogen bonds, generating S6 ring motifs. In the crystal, molecules are linked into a three-dimensional network by O—H⋯O hydrogen bonds.
Related literature
For applications and biological activity of et al. (2011, 2012); Rada & Leto (2008); Almasirad et al. (2006). For related structures, see: Taha et al. (2012); Shen et al. (2012).
see: KhanExperimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2000); cell SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536813001748/rz5037sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813001748/rz5037Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813001748/rz5037Isup3.cml
The title compound was synthesized by refluxing a mixture of 2-methoxybenzohydrazide (0.332 g, 2 mmol) and 2,4,6-trihydroxy-5-methoxybenzaldehyde (0.304 g, 2 mmol) in methanol along with a catalytical amount of acetic acid for 3 h. The progress of reaction was monitored by TLC. After completion of the reaction, the solvent was evaporated by vacuum to afford the crude product which was recrystallized by dissolving in methanol at room temperature. Needle-shaped crystals were obtained on slow evaporation of the solvent (0.496 g, 82% yield). All chemicals were purchased by Sigma Aldrich, Germany.
H atoms on methyl, phenyl and methine carbon atoms were positioned geometrically with C—H = 0.96 Å (CH3) and 0.93 Å (CH) and constrained to ride on their parent atoms with Uiso(H)= 1.5Ueq(CH3) or 1.2Ueq(CH). The H atoms on the nitrogen (N–H= 0.835 (17) Å) and oxygen (O–H= 0.84 (2)–0.93(2 Å) atoms were located in a difference Fourier map and refined isotropically. A rotating group model was applied to the methyl group.
Data collection: SMART (Bruker, 2000); cell
SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008), PARST (Nardelli, 1995) and PLATON (Spek, 2009).C15H14N2O5 | F(000) = 632 |
Mr = 302.28 | Dx = 1.414 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 3988 reflections |
a = 6.4580 (4) Å | θ = 2.5–27.8° |
b = 13.4772 (8) Å | µ = 0.11 mm−1 |
c = 16.3169 (9) Å | T = 273 K |
V = 1420.15 (14) Å3 | Block, colourless |
Z = 4 | 0.34 × 0.23 × 0.21 mm |
Bruker SMART APEX CCD area-detector diffractometer | 2643 independent reflections |
Radiation source: fine-focus sealed tube | 2481 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
ω scan | θmax = 25.5°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −6→7 |
Tmin = 0.964, Tmax = 0.978 | k = −16→16 |
8414 measured reflections | l = −19→19 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.080 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0444P)2 + 0.1141P] where P = (Fo2 + 2Fc2)/3 |
2643 reflections | (Δ/σ)max < 0.001 |
216 parameters | Δρmax = 0.13 e Å−3 |
0 restraints | Δρmin = −0.13 e Å−3 |
C15H14N2O5 | V = 1420.15 (14) Å3 |
Mr = 302.28 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 6.4580 (4) Å | µ = 0.11 mm−1 |
b = 13.4772 (8) Å | T = 273 K |
c = 16.3169 (9) Å | 0.34 × 0.23 × 0.21 mm |
Bruker SMART APEX CCD area-detector diffractometer | 2643 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 2481 reflections with I > 2σ(I) |
Tmin = 0.964, Tmax = 0.978 | Rint = 0.019 |
8414 measured reflections |
R[F2 > 2σ(F2)] = 0.030 | 0 restraints |
wR(F2) = 0.080 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | Δρmax = 0.13 e Å−3 |
2643 reflections | Δρmin = −0.13 e Å−3 |
216 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.5330 (2) | 0.22125 (9) | 0.11606 (8) | 0.0543 (3) | |
O2 | 1.1070 (2) | 0.40655 (9) | 0.02009 (8) | 0.0578 (3) | |
H3A | 1.091 (5) | 0.3604 (19) | −0.0222 (16) | 0.100 (8)* | |
O3 | 0.6905 (2) | 0.53380 (9) | 0.23545 (7) | 0.0511 (3) | |
H2B | 0.785 (3) | 0.5781 (16) | 0.2396 (12) | 0.065 (7)* | |
O4 | 0.0021 (2) | 0.16307 (8) | 0.25569 (7) | 0.0518 (3) | |
O5 | −0.0653 (2) | 0.42748 (8) | 0.38286 (8) | 0.0578 (3) | |
N1 | 0.2953 (2) | 0.30535 (10) | 0.22647 (8) | 0.0421 (3) | |
N2 | 0.1262 (2) | 0.31688 (11) | 0.27673 (8) | 0.0436 (3) | |
H2A | 0.111 (3) | 0.3735 (14) | 0.2990 (11) | 0.054 (5)* | |
C1 | 0.6522 (2) | 0.30443 (11) | 0.12072 (9) | 0.0403 (3) | |
C2 | 0.8209 (3) | 0.31059 (12) | 0.06945 (10) | 0.0447 (4) | |
H2C | 0.8508 | 0.2594 | 0.0331 | 0.054* | |
C3 | 0.9454 (3) | 0.39399 (11) | 0.07272 (9) | 0.0419 (4) | |
C4 | 0.9087 (2) | 0.46946 (11) | 0.12866 (9) | 0.0410 (3) | |
H4A | 0.9973 | 0.5238 | 0.1318 | 0.049* | |
C5 | 0.7383 (2) | 0.46267 (10) | 0.17972 (9) | 0.0382 (3) | |
C6 | 0.6031 (2) | 0.38110 (11) | 0.17590 (9) | 0.0377 (3) | |
C7 | 0.4203 (3) | 0.37914 (12) | 0.22646 (9) | 0.0411 (3) | |
H7A | 0.3922 | 0.4331 | 0.2602 | 0.049* | |
C8 | −0.0127 (2) | 0.24489 (11) | 0.28886 (9) | 0.0385 (3) | |
C9 | −0.1900 (2) | 0.26844 (11) | 0.34441 (9) | 0.0376 (3) | |
C10 | −0.3409 (3) | 0.19578 (12) | 0.35197 (10) | 0.0448 (4) | |
H10A | −0.3256 | 0.1368 | 0.3231 | 0.054* | |
C11 | −0.5130 (3) | 0.20830 (14) | 0.40098 (10) | 0.0521 (4) | |
H11A | −0.6111 | 0.1581 | 0.4055 | 0.063* | |
C12 | −0.5376 (3) | 0.29535 (14) | 0.44283 (10) | 0.0550 (5) | |
H12A | −0.6537 | 0.3043 | 0.4758 | 0.066* | |
C13 | −0.3922 (3) | 0.37023 (14) | 0.43680 (10) | 0.0512 (4) | |
H13A | −0.4119 | 0.4295 | 0.4650 | 0.061* | |
C14 | −0.2165 (3) | 0.35718 (12) | 0.38868 (9) | 0.0431 (4) | |
C15 | −0.0887 (4) | 0.52036 (14) | 0.42409 (13) | 0.0725 (6) | |
H15A | 0.0214 | 0.5642 | 0.4082 | 0.109* | |
H15B | −0.0837 | 0.5099 | 0.4823 | 0.109* | |
H15C | −0.2194 | 0.5494 | 0.4096 | 0.109* | |
H1A | 0.432 (4) | 0.2267 (18) | 0.1484 (15) | 0.094 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0576 (8) | 0.0517 (7) | 0.0535 (7) | −0.0166 (6) | 0.0105 (6) | −0.0109 (5) |
O2 | 0.0546 (8) | 0.0572 (7) | 0.0615 (7) | −0.0047 (6) | 0.0220 (7) | −0.0072 (6) |
O3 | 0.0522 (8) | 0.0449 (7) | 0.0562 (7) | −0.0059 (6) | 0.0124 (6) | −0.0104 (5) |
O4 | 0.0498 (7) | 0.0414 (6) | 0.0640 (7) | 0.0035 (5) | 0.0084 (6) | −0.0035 (5) |
O5 | 0.0560 (8) | 0.0481 (6) | 0.0692 (8) | −0.0065 (6) | 0.0153 (7) | −0.0140 (6) |
N1 | 0.0348 (7) | 0.0485 (7) | 0.0429 (7) | 0.0014 (6) | 0.0043 (6) | 0.0031 (6) |
N2 | 0.0360 (7) | 0.0438 (7) | 0.0509 (8) | 0.0004 (6) | 0.0083 (6) | −0.0015 (6) |
C1 | 0.0416 (9) | 0.0404 (7) | 0.0388 (7) | −0.0034 (7) | −0.0035 (7) | 0.0019 (6) |
C2 | 0.0500 (10) | 0.0429 (8) | 0.0411 (8) | 0.0020 (8) | 0.0065 (7) | −0.0041 (6) |
C3 | 0.0387 (9) | 0.0456 (8) | 0.0416 (8) | 0.0031 (7) | 0.0052 (7) | 0.0058 (6) |
C4 | 0.0411 (9) | 0.0375 (7) | 0.0444 (8) | −0.0031 (7) | 0.0017 (7) | 0.0022 (6) |
C5 | 0.0405 (8) | 0.0375 (7) | 0.0365 (7) | 0.0049 (7) | −0.0005 (7) | 0.0021 (6) |
C6 | 0.0362 (8) | 0.0416 (8) | 0.0354 (7) | 0.0020 (7) | −0.0004 (7) | 0.0043 (6) |
C7 | 0.0388 (9) | 0.0448 (8) | 0.0396 (8) | 0.0021 (7) | 0.0009 (7) | 0.0021 (6) |
C8 | 0.0355 (8) | 0.0398 (8) | 0.0401 (7) | 0.0060 (7) | −0.0030 (7) | 0.0061 (6) |
C9 | 0.0341 (8) | 0.0421 (8) | 0.0366 (7) | 0.0034 (6) | −0.0015 (6) | 0.0057 (6) |
C10 | 0.0418 (9) | 0.0471 (8) | 0.0453 (8) | −0.0014 (7) | −0.0017 (7) | 0.0050 (7) |
C11 | 0.0427 (10) | 0.0657 (11) | 0.0480 (9) | −0.0100 (9) | 0.0030 (8) | 0.0080 (8) |
C12 | 0.0410 (10) | 0.0777 (12) | 0.0462 (9) | 0.0026 (9) | 0.0109 (8) | 0.0080 (8) |
C13 | 0.0520 (11) | 0.0583 (10) | 0.0433 (8) | 0.0049 (9) | 0.0070 (8) | −0.0027 (7) |
C14 | 0.0408 (9) | 0.0484 (8) | 0.0403 (8) | 0.0006 (7) | 0.0002 (7) | 0.0037 (7) |
C15 | 0.0877 (16) | 0.0541 (11) | 0.0757 (12) | −0.0109 (11) | 0.0154 (12) | −0.0200 (9) |
O1—C1 | 1.3622 (18) | C4—H4A | 0.9300 |
O1—H1A | 0.84 (3) | C5—C6 | 1.405 (2) |
O2—C3 | 1.362 (2) | C6—C7 | 1.440 (2) |
O2—H3A | 0.93 (3) | C7—H7A | 0.9300 |
O3—C5 | 1.3569 (18) | C8—C9 | 1.494 (2) |
O3—H2B | 0.86 (2) | C9—C10 | 1.387 (2) |
O4—C8 | 1.2321 (19) | C9—C14 | 1.408 (2) |
O5—C14 | 1.364 (2) | C10—C11 | 1.379 (2) |
O5—C15 | 1.429 (2) | C10—H10A | 0.9300 |
N1—C7 | 1.281 (2) | C11—C12 | 1.367 (3) |
N1—N2 | 1.3742 (18) | C11—H11A | 0.9300 |
N2—C8 | 1.336 (2) | C12—C13 | 1.382 (3) |
N2—H2A | 0.851 (19) | C12—H12A | 0.9300 |
C1—C2 | 1.376 (2) | C13—C14 | 1.391 (2) |
C1—C6 | 1.407 (2) | C13—H13A | 0.9300 |
C2—C3 | 1.383 (2) | C15—H15A | 0.9600 |
C2—H2C | 0.9300 | C15—H15B | 0.9600 |
C3—C4 | 1.387 (2) | C15—H15C | 0.9600 |
C4—C5 | 1.384 (2) | ||
C1—O1—H1A | 109.3 (17) | C6—C7—H7A | 119.0 |
C3—O2—H3A | 107.3 (17) | O4—C8—N2 | 122.19 (14) |
C5—O3—H2B | 112.6 (14) | O4—C8—C9 | 121.05 (14) |
C14—O5—C15 | 120.00 (14) | N2—C8—C9 | 116.75 (13) |
C7—N1—N2 | 114.39 (13) | C10—C9—C14 | 117.96 (14) |
C8—N2—N1 | 122.66 (13) | C10—C9—C8 | 116.26 (13) |
C8—N2—H2A | 120.7 (14) | C14—C9—C8 | 125.78 (14) |
N1—N2—H2A | 116.6 (14) | C11—C10—C9 | 122.09 (16) |
O1—C1—C2 | 117.59 (14) | C11—C10—H10A | 119.0 |
O1—C1—C6 | 120.85 (14) | C9—C10—H10A | 119.0 |
C2—C1—C6 | 121.56 (14) | C12—C11—C10 | 119.24 (16) |
C1—C2—C3 | 119.07 (14) | C12—C11—H11A | 120.4 |
C1—C2—H2C | 120.5 | C10—C11—H11A | 120.4 |
C3—C2—H2C | 120.5 | C11—C12—C13 | 120.80 (16) |
O2—C3—C2 | 121.47 (14) | C11—C12—H12A | 119.6 |
O2—C3—C4 | 117.05 (14) | C13—C12—H12A | 119.6 |
C2—C3—C4 | 121.47 (14) | C12—C13—C14 | 120.14 (16) |
C5—C4—C3 | 118.93 (14) | C12—C13—H13A | 119.9 |
C5—C4—H4A | 120.5 | C14—C13—H13A | 119.9 |
C3—C4—H4A | 120.5 | O5—C14—C13 | 122.37 (15) |
O3—C5—C4 | 122.54 (14) | O5—C14—C9 | 117.88 (14) |
O3—C5—C6 | 116.16 (13) | C13—C14—C9 | 119.75 (15) |
C4—C5—C6 | 121.29 (13) | O5—C15—H15A | 109.5 |
C5—C6—C1 | 117.57 (13) | O5—C15—H15B | 109.5 |
C5—C6—C7 | 119.87 (13) | H15A—C15—H15B | 109.5 |
C1—C6—C7 | 122.55 (14) | O5—C15—H15C | 109.5 |
N1—C7—C6 | 122.06 (14) | H15A—C15—H15C | 109.5 |
N1—C7—H7A | 119.0 | H15B—C15—H15C | 109.5 |
C7—N1—N2—C8 | −175.22 (14) | N1—N2—C8—O4 | 0.1 (2) |
O1—C1—C2—C3 | −179.90 (15) | N1—N2—C8—C9 | −179.32 (13) |
C6—C1—C2—C3 | 0.4 (2) | O4—C8—C9—C10 | −3.9 (2) |
C1—C2—C3—O2 | −176.07 (15) | N2—C8—C9—C10 | 175.56 (14) |
C1—C2—C3—C4 | 2.6 (2) | O4—C8—C9—C14 | 176.47 (15) |
O2—C3—C4—C5 | 175.90 (14) | N2—C8—C9—C14 | −4.1 (2) |
C2—C3—C4—C5 | −2.8 (2) | C14—C9—C10—C11 | 0.0 (2) |
C3—C4—C5—O3 | −179.30 (14) | C8—C9—C10—C11 | −179.71 (14) |
C3—C4—C5—C6 | 0.1 (2) | C9—C10—C11—C12 | 0.8 (2) |
O3—C5—C6—C1 | −177.87 (13) | C10—C11—C12—C13 | −0.3 (3) |
C4—C5—C6—C1 | 2.7 (2) | C11—C12—C13—C14 | −0.9 (3) |
O3—C5—C6—C7 | 3.1 (2) | C15—O5—C14—C13 | −2.9 (2) |
C4—C5—C6—C7 | −176.29 (13) | C15—O5—C14—C9 | 177.58 (16) |
O1—C1—C6—C5 | 177.32 (14) | C12—C13—C14—O5 | −177.81 (16) |
C2—C1—C6—C5 | −2.9 (2) | C12—C13—C14—C9 | 1.7 (2) |
O1—C1—C6—C7 | −3.7 (2) | C10—C9—C14—O5 | 178.31 (14) |
C2—C1—C6—C7 | 176.02 (15) | C8—C9—C14—O5 | −2.0 (2) |
N2—N1—C7—C6 | −178.41 (13) | C10—C9—C14—C13 | −1.2 (2) |
C5—C6—C7—N1 | −178.30 (14) | C8—C9—C14—C13 | 178.45 (14) |
C1—C6—C7—N1 | 2.8 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···N1 | 0.84 (3) | 1.88 (2) | 2.6243 (18) | 147 (2) |
N2—H2A···O5 | 0.851 (19) | 1.923 (19) | 2.5981 (18) | 135.4 (17) |
O3—H2B···O4i | 0.86 (2) | 1.79 (2) | 2.6452 (17) | 175 (2) |
O2—H3A···O1ii | 0.93 (3) | 1.92 (3) | 2.8513 (18) | 172 (3) |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) x+1/2, −y+1/2, −z. |
Experimental details
Crystal data | |
Chemical formula | C15H14N2O5 |
Mr | 302.28 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 273 |
a, b, c (Å) | 6.4580 (4), 13.4772 (8), 16.3169 (9) |
V (Å3) | 1420.15 (14) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.34 × 0.23 × 0.21 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.964, 0.978 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8414, 2643, 2481 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.030, 0.080, 1.07 |
No. of reflections | 2643 |
No. of parameters | 216 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.13, −0.13 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), PARST (Nardelli, 1995) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···N1 | 0.84 (3) | 1.88 (2) | 2.6243 (18) | 147 (2) |
N2—H2A···O5 | 0.851 (19) | 1.923 (19) | 2.5981 (18) | 135.4 (17) |
O3—H2B···O4i | 0.86 (2) | 1.79 (2) | 2.6452 (17) | 175 (2) |
O2—H3A···O1ii | 0.93 (3) | 1.92 (3) | 2.8513 (18) | 172 (3) |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) x+1/2, −y+1/2, −z. |
References
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Hydrazone derivatives represent an important class of organic compounds. Due to their biological activities (Khan et al., 2011, 2012; Rada & Leto, 2008; Almasirad et al., 2006) the research for this class of compounds is an area of great interest. The title compound is a hydrazone derivatives synthesized as a part of our ongoing research to establish a library of bioactive hydrazone derivatives.
The structure of the title compound (Fig. 1) is similar to that of the previously published compound N'-(3,4-dihydroxybenzylidene)-2- methoxybenzohydrazide (Shen et al., 2012) with the difference that the 3,4-dihydroxy benzene ring is replaced by a 2,4,6-trihydroxy benzene ring (C1–C6). The dihedral angle between the two benzene rings is 7.55 (8)°. The bond lengths and angles were found to be similar to those observed in structurally related benzohydrazide derivatives (Taha et al., 2012; Shen et al., 2012). Intramolecular O1—H1A···N1 and N2—H2A···O5 hydrogen bonds play an important role to stabilize the E configuration of the azomethine olefinic bond (Table 1). The crystal structure (Fig. 2) is stabilized by intermolecular O3—H2B···O4 and O2—H3A···O1 interactions to form a three-dimensional network.