organic compounds
2-[(2-Hydroxynaphthalen-1-yl)methylideneamino]-5,6,7,8-tetrahydro-4H-cyclohepta[b]thiophene-3-carbonitrile
aChemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203, Jeddah 21589, Saudi Arabia, bCenter of Excellence for Advanced Materials Research (CEAMR), Faculty of Science, King Abdulaziz University, PO Box 80203, Jeddah 21589, Saudi Arabia, and cDepartment of Chemistry, University of Gujrat, Gujrat, Pakistan
*Correspondence e-mail: aasiri2@kau.edu.sa, ghulam.mustafa@uog.edu.pk
Two independent molecules, A and B, comprise the of the title compound, C21H18N2OS, with the difference in the angle of orientation between the naphthalene ring system and the mean plane of the cycloheptyl ring [16.13 (1) in A and 11.48 (5)° in B], being evident. The cycloheptyl ring adopts a distorted chair conformation in each molecule with r.m.s. deviations of 0.2345 (4) (A) and 0.2302 (4) Å (B). Intramolecular O—H⋯N hydrogen bonding generates planar six-membered S(6) loops with r.m.s. deviations of 0.0099 (1) (A) and 0.0286 (1) Å (B).
Related literature
For the synthesis and related structures, see: Asiri et al. (2011a,b). For graph-set notation, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2012); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 2012) and X-SEED (Barbour, 2001).
Supporting information
10.1107/S160053681300007X/tk5186sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681300007X/tk5186Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681300007X/tk5186Isup3.cml
The title compound was prepared following literature methods (Asiri et al. 2011a; 2011b) and recrystallized from its methanol solution by slow evaporation.
The C—H H-atoms were positioned with idealized geometry with C—H = 0.93 Å for aromatic-H and C—H = 0.97 Å for methylene groups. H-atoms were refined as riding with Uiso(H) = 1.2Ueq(C). The O—H atoms were refined with Uiso(H) = 1.5Ueq(O).
Data collection: CrysAlis PRO (Agilent, 2012); cell
CrysAlis PRO (Agilent, 2012); data reduction: CrysAlis PRO (Agilent, 2012); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 2012) and X-SEED (Barbour, 2001).C21H18N2OS | F(000) = 2912 |
Mr = 346.43 | Dx = 1.311 Mg m−3 |
Orthorhombic, Pbca | Cu Kα radiation, λ = 1.54184 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 7977 reflections |
a = 13.5472 (2) Å | θ = 3.3–74.7° |
b = 14.4747 (4) Å | µ = 1.71 mm−1 |
c = 35.7902 (6) Å | T = 296 K |
V = 7018.2 (2) Å3 | Prismatic, dark red |
Z = 16 | 0.37 × 0.21 × 0.14 mm |
Agilent SuperNova (Dual, Cu at zero, Atlas, CCD) diffractometer | 7066 independent reflections |
Radiation source: SuperNova (Cu) X-ray Source | 5288 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.035 |
ω scans | θmax = 74.9°, θmin = 4.1° |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) | h = −16→14 |
Tmin = 0.858, Tmax = 1.000 | k = −17→13 |
28490 measured reflections | l = −44→44 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.161 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0753P)2 + 3.2292P] where P = (Fo2 + 2Fc2)/3 |
7066 reflections | (Δ/σ)max = 0.001 |
457 parameters | Δρmax = 0.52 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
C21H18N2OS | V = 7018.2 (2) Å3 |
Mr = 346.43 | Z = 16 |
Orthorhombic, Pbca | Cu Kα radiation |
a = 13.5472 (2) Å | µ = 1.71 mm−1 |
b = 14.4747 (4) Å | T = 296 K |
c = 35.7902 (6) Å | 0.37 × 0.21 × 0.14 mm |
Agilent SuperNova (Dual, Cu at zero, Atlas, CCD) diffractometer | 7066 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) | 5288 reflections with I > 2σ(I) |
Tmin = 0.858, Tmax = 1.000 | Rint = 0.035 |
28490 measured reflections |
R[F2 > 2σ(F2)] = 0.054 | 0 restraints |
wR(F2) = 0.161 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.52 e Å−3 |
7066 reflections | Δρmin = −0.25 e Å−3 |
457 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.24913 (4) | 0.21343 (5) | 0.314590 (15) | 0.05676 (19) | |
S2 | 0.45786 (4) | 0.50708 (5) | 0.564135 (16) | 0.05789 (19) | |
O1 | 0.30203 (12) | 0.26884 (15) | 0.46051 (5) | 0.0657 (5) | |
O2 | 0.51390 (13) | 0.57956 (16) | 0.70915 (5) | 0.0684 (5) | |
N1 | 0.27388 (13) | 0.23563 (13) | 0.39056 (5) | 0.0472 (4) | |
N2 | 0.0201 (2) | 0.2458 (3) | 0.42460 (7) | 0.0989 (10) | |
N3 | 0.48552 (13) | 0.54653 (14) | 0.63907 (5) | 0.0510 (5) | |
N4 | 0.2337 (2) | 0.5752 (3) | 0.67298 (7) | 0.0986 (10) | |
C1 | 0.43541 (16) | 0.24092 (16) | 0.41754 (6) | 0.0459 (5) | |
C2 | 0.54027 (16) | 0.23125 (16) | 0.41241 (6) | 0.0499 (5) | |
C3 | 0.58494 (18) | 0.2128 (2) | 0.37759 (8) | 0.0645 (7) | |
H3 | 0.5456 | 0.2070 | 0.3564 | 0.077* | |
C4 | 0.6851 (2) | 0.2034 (2) | 0.37445 (10) | 0.0812 (9) | |
H4 | 0.7130 | 0.1908 | 0.3513 | 0.097* | |
C5 | 0.7461 (2) | 0.2124 (2) | 0.40592 (11) | 0.0816 (9) | |
H5 | 0.8141 | 0.2064 | 0.4035 | 0.098* | |
C6 | 0.7060 (2) | 0.2298 (2) | 0.43951 (9) | 0.0713 (8) | |
H6 | 0.7470 | 0.2356 | 0.4602 | 0.086* | |
C7 | 0.60312 (17) | 0.23961 (17) | 0.44399 (7) | 0.0557 (6) | |
C8 | 0.56125 (19) | 0.25724 (19) | 0.47943 (7) | 0.0625 (7) | |
H8 | 0.6025 | 0.2626 | 0.5001 | 0.075* | |
C9 | 0.46320 (19) | 0.2665 (2) | 0.48411 (7) | 0.0611 (6) | |
H9 | 0.4377 | 0.2780 | 0.5078 | 0.073* | |
C10 | 0.39935 (17) | 0.25896 (17) | 0.45341 (6) | 0.0511 (5) | |
C11 | 0.36858 (16) | 0.23066 (16) | 0.38672 (6) | 0.0475 (5) | |
H11 | 0.3944 | 0.2200 | 0.3630 | 0.057* | |
C12 | 0.21176 (16) | 0.22661 (16) | 0.36021 (6) | 0.0465 (5) | |
C13 | 0.11097 (16) | 0.22964 (19) | 0.36215 (6) | 0.0531 (6) | |
C14 | 0.06278 (18) | 0.2232 (2) | 0.32699 (7) | 0.0670 (7) | |
C15 | 0.12889 (19) | 0.2154 (2) | 0.29865 (7) | 0.0673 (7) | |
C16 | 0.1107 (3) | 0.2146 (3) | 0.25696 (8) | 0.0941 (11) | |
H16A | 0.0941 | 0.2768 | 0.2492 | 0.113* | |
H16B | 0.1718 | 0.1978 | 0.2446 | 0.113* | |
C17 | 0.0333 (3) | 0.1525 (3) | 0.24402 (9) | 0.1011 (12) | |
H17A | 0.0490 | 0.0907 | 0.2527 | 0.121* | |
H17B | 0.0352 | 0.1512 | 0.2169 | 0.121* | |
C18 | −0.0719 (3) | 0.1746 (3) | 0.25595 (9) | 0.0967 (11) | |
H18A | −0.0866 | 0.2377 | 0.2487 | 0.116* | |
H18B | −0.1165 | 0.1346 | 0.2422 | 0.116* | |
C19 | −0.0935 (2) | 0.1643 (3) | 0.29717 (11) | 0.1069 (13) | |
H19A | −0.1644 | 0.1677 | 0.3006 | 0.128* | |
H19B | −0.0728 | 0.1030 | 0.3048 | 0.128* | |
C20 | −0.0477 (2) | 0.2311 (3) | 0.32213 (10) | 0.1028 (13) | |
H20A | −0.0783 | 0.2254 | 0.3465 | 0.123* | |
H20B | −0.0624 | 0.2926 | 0.3129 | 0.123* | |
C21 | 0.06072 (18) | 0.2395 (2) | 0.39699 (7) | 0.0646 (7) | |
C22 | 0.64645 (16) | 0.54730 (16) | 0.66648 (6) | 0.0489 (5) | |
C23 | 0.75161 (17) | 0.53553 (17) | 0.66162 (6) | 0.0508 (5) | |
C24 | 0.79674 (19) | 0.5194 (2) | 0.62665 (7) | 0.0635 (7) | |
H24 | 0.7578 | 0.5162 | 0.6053 | 0.076* | |
C25 | 0.8967 (2) | 0.5085 (2) | 0.62369 (9) | 0.0763 (8) | |
H25 | 0.9245 | 0.4973 | 0.6004 | 0.092* | |
C26 | 0.9576 (2) | 0.5139 (2) | 0.65491 (10) | 0.0767 (8) | |
H26 | 1.0255 | 0.5066 | 0.6525 | 0.092* | |
C27 | 0.9170 (2) | 0.5298 (2) | 0.68894 (9) | 0.0699 (8) | |
H27 | 0.9577 | 0.5332 | 0.7098 | 0.084* | |
C28 | 0.81442 (18) | 0.54127 (18) | 0.69330 (7) | 0.0557 (6) | |
C29 | 0.77185 (19) | 0.55757 (19) | 0.72897 (7) | 0.0621 (7) | |
H29 | 0.8127 | 0.5596 | 0.7498 | 0.075* | |
C30 | 0.6739 (2) | 0.57016 (19) | 0.73347 (7) | 0.0622 (6) | |
H30 | 0.6483 | 0.5815 | 0.7571 | 0.075* | |
C31 | 0.61033 (18) | 0.56608 (18) | 0.70233 (6) | 0.0535 (6) | |
C32 | 0.57975 (16) | 0.53732 (17) | 0.63555 (6) | 0.0508 (5) | |
H32 | 0.6055 | 0.5237 | 0.6121 | 0.061* | |
C33 | 0.42264 (16) | 0.53346 (17) | 0.60903 (6) | 0.0489 (5) | |
C34 | 0.32167 (16) | 0.54044 (17) | 0.61095 (6) | 0.0500 (5) | |
C35 | 0.27183 (17) | 0.52450 (18) | 0.57632 (6) | 0.0526 (6) | |
C36 | 0.33707 (18) | 0.50529 (19) | 0.54855 (7) | 0.0563 (6) | |
C37 | 0.3190 (2) | 0.4775 (3) | 0.50862 (7) | 0.0785 (9) | |
H37A | 0.3811 | 0.4810 | 0.4952 | 0.094* | |
H37B | 0.2980 | 0.4134 | 0.5083 | 0.094* | |
C38 | 0.2441 (3) | 0.5336 (3) | 0.48794 (8) | 0.0933 (11) | |
H38A | 0.2462 | 0.5159 | 0.4618 | 0.112* | |
H38B | 0.2633 | 0.5981 | 0.4894 | 0.112* | |
C39 | 0.1380 (2) | 0.5250 (3) | 0.50151 (9) | 0.0816 (9) | |
H39A | 0.0947 | 0.5523 | 0.4830 | 0.098* | |
H39B | 0.1215 | 0.4600 | 0.5034 | 0.098* | |
C40 | 0.1183 (2) | 0.5701 (2) | 0.53854 (8) | 0.0778 (8) | |
H40A | 0.1429 | 0.6329 | 0.5373 | 0.093* | |
H40B | 0.0473 | 0.5737 | 0.5418 | 0.093* | |
C41 | 0.16098 (18) | 0.5257 (2) | 0.57281 (8) | 0.0686 (7) | |
H41A | 0.1378 | 0.4623 | 0.5738 | 0.082* | |
H41B | 0.1344 | 0.5572 | 0.5945 | 0.082* | |
C42 | 0.27270 (18) | 0.5608 (2) | 0.64544 (7) | 0.0624 (7) | |
H1O | 0.272 (3) | 0.261 (2) | 0.4409 (9) | 0.094* | |
H2O | 0.486 (3) | 0.577 (3) | 0.6889 (9) | 0.094* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0477 (3) | 0.0840 (5) | 0.0386 (3) | 0.0013 (3) | 0.0038 (2) | −0.0040 (3) |
S2 | 0.0453 (3) | 0.0822 (5) | 0.0461 (3) | 0.0019 (3) | 0.0062 (2) | −0.0034 (3) |
O1 | 0.0496 (10) | 0.1030 (15) | 0.0445 (9) | −0.0027 (9) | 0.0032 (7) | −0.0078 (9) |
O2 | 0.0559 (10) | 0.1014 (15) | 0.0480 (9) | 0.0012 (10) | 0.0052 (8) | −0.0017 (10) |
N1 | 0.0428 (9) | 0.0580 (11) | 0.0408 (9) | 0.0009 (8) | −0.0020 (7) | −0.0018 (8) |
N2 | 0.0766 (17) | 0.156 (3) | 0.0644 (15) | 0.0023 (18) | 0.0201 (14) | −0.0130 (17) |
N3 | 0.0453 (10) | 0.0644 (13) | 0.0432 (9) | 0.0002 (9) | −0.0012 (8) | 0.0046 (9) |
N4 | 0.0770 (17) | 0.167 (3) | 0.0524 (13) | 0.0185 (18) | 0.0161 (12) | −0.0012 (17) |
C1 | 0.0453 (11) | 0.0495 (13) | 0.0430 (11) | −0.0007 (9) | −0.0035 (9) | 0.0009 (9) |
C2 | 0.0451 (11) | 0.0516 (13) | 0.0528 (12) | −0.0020 (10) | −0.0029 (10) | 0.0047 (11) |
C3 | 0.0458 (13) | 0.0838 (19) | 0.0640 (15) | −0.0004 (12) | 0.0018 (11) | −0.0035 (14) |
C4 | 0.0553 (15) | 0.101 (2) | 0.087 (2) | 0.0032 (15) | 0.0154 (15) | −0.0028 (18) |
C5 | 0.0381 (13) | 0.091 (2) | 0.116 (3) | 0.0000 (13) | −0.0038 (15) | 0.005 (2) |
C6 | 0.0500 (14) | 0.0738 (19) | 0.090 (2) | −0.0047 (13) | −0.0174 (14) | 0.0081 (16) |
C7 | 0.0485 (12) | 0.0513 (14) | 0.0673 (15) | −0.0053 (10) | −0.0132 (11) | 0.0071 (12) |
C8 | 0.0644 (16) | 0.0688 (17) | 0.0543 (13) | −0.0093 (13) | −0.0190 (12) | 0.0073 (12) |
C9 | 0.0662 (15) | 0.0746 (18) | 0.0424 (11) | −0.0086 (13) | −0.0081 (11) | 0.0022 (12) |
C10 | 0.0504 (12) | 0.0585 (14) | 0.0444 (11) | −0.0042 (10) | −0.0018 (9) | 0.0021 (10) |
C11 | 0.0442 (11) | 0.0569 (14) | 0.0413 (10) | 0.0013 (9) | 0.0005 (9) | −0.0016 (10) |
C12 | 0.0447 (11) | 0.0569 (14) | 0.0378 (10) | 0.0019 (9) | −0.0003 (8) | −0.0013 (10) |
C13 | 0.0435 (11) | 0.0726 (16) | 0.0432 (11) | 0.0011 (10) | 0.0010 (9) | −0.0052 (11) |
C14 | 0.0486 (13) | 0.102 (2) | 0.0505 (13) | 0.0009 (13) | −0.0074 (11) | −0.0089 (14) |
C15 | 0.0577 (14) | 0.101 (2) | 0.0428 (12) | −0.0007 (14) | −0.0074 (11) | −0.0055 (13) |
C16 | 0.091 (2) | 0.147 (3) | 0.0446 (14) | −0.017 (2) | −0.0099 (14) | −0.0047 (18) |
C17 | 0.109 (3) | 0.137 (3) | 0.0577 (17) | −0.005 (2) | −0.0232 (17) | −0.011 (2) |
C18 | 0.086 (2) | 0.121 (3) | 0.084 (2) | 0.008 (2) | −0.0430 (18) | −0.014 (2) |
C19 | 0.0621 (19) | 0.157 (4) | 0.102 (3) | 0.001 (2) | −0.0229 (18) | −0.015 (3) |
C20 | 0.0498 (16) | 0.177 (4) | 0.082 (2) | 0.008 (2) | −0.0145 (15) | −0.027 (2) |
C21 | 0.0475 (13) | 0.097 (2) | 0.0490 (13) | 0.0010 (13) | 0.0024 (11) | −0.0069 (13) |
C22 | 0.0480 (12) | 0.0530 (13) | 0.0457 (11) | −0.0017 (10) | −0.0027 (9) | 0.0044 (10) |
C23 | 0.0476 (12) | 0.0535 (13) | 0.0511 (12) | −0.0008 (10) | −0.0028 (10) | 0.0020 (11) |
C24 | 0.0524 (14) | 0.0793 (18) | 0.0587 (14) | 0.0019 (12) | −0.0005 (11) | −0.0054 (13) |
C25 | 0.0558 (15) | 0.091 (2) | 0.0816 (19) | 0.0042 (14) | 0.0106 (14) | −0.0116 (17) |
C26 | 0.0463 (14) | 0.083 (2) | 0.101 (2) | 0.0052 (13) | −0.0027 (15) | −0.0004 (18) |
C27 | 0.0543 (15) | 0.0727 (18) | 0.0826 (19) | −0.0016 (13) | −0.0186 (14) | 0.0064 (15) |
C28 | 0.0542 (13) | 0.0544 (14) | 0.0584 (13) | −0.0011 (11) | −0.0112 (11) | 0.0046 (11) |
C29 | 0.0654 (16) | 0.0699 (17) | 0.0512 (13) | −0.0060 (13) | −0.0144 (11) | 0.0074 (12) |
C30 | 0.0710 (16) | 0.0732 (17) | 0.0424 (11) | −0.0082 (13) | −0.0028 (11) | 0.0042 (12) |
C31 | 0.0523 (13) | 0.0619 (15) | 0.0463 (12) | −0.0036 (11) | 0.0012 (10) | 0.0037 (11) |
C32 | 0.0486 (12) | 0.0598 (14) | 0.0441 (11) | −0.0012 (10) | 0.0005 (9) | 0.0043 (10) |
C33 | 0.0463 (12) | 0.0581 (14) | 0.0422 (11) | 0.0008 (10) | 0.0015 (9) | 0.0038 (10) |
C34 | 0.0461 (11) | 0.0604 (14) | 0.0434 (11) | −0.0004 (10) | 0.0031 (9) | 0.0021 (10) |
C35 | 0.0450 (12) | 0.0667 (15) | 0.0460 (11) | −0.0010 (10) | −0.0003 (9) | 0.0011 (11) |
C36 | 0.0508 (13) | 0.0720 (16) | 0.0462 (12) | −0.0018 (11) | 0.0014 (10) | −0.0043 (11) |
C37 | 0.0730 (18) | 0.113 (3) | 0.0492 (14) | −0.0037 (17) | 0.0027 (13) | −0.0168 (15) |
C38 | 0.102 (2) | 0.130 (3) | 0.0482 (15) | −0.006 (2) | −0.0155 (16) | −0.0017 (17) |
C39 | 0.0742 (19) | 0.101 (2) | 0.0699 (18) | −0.0038 (17) | −0.0273 (15) | −0.0072 (17) |
C40 | 0.0606 (16) | 0.090 (2) | 0.083 (2) | 0.0038 (15) | −0.0208 (14) | −0.0045 (17) |
C41 | 0.0473 (13) | 0.095 (2) | 0.0639 (15) | 0.0006 (13) | −0.0045 (12) | 0.0006 (15) |
C42 | 0.0485 (13) | 0.093 (2) | 0.0461 (12) | 0.0072 (13) | 0.0028 (10) | 0.0027 (13) |
S1—C12 | 1.720 (2) | C18—H18A | 0.9700 |
S1—C15 | 1.726 (3) | C18—H18B | 0.9700 |
S2—C33 | 1.719 (2) | C19—C20 | 1.456 (5) |
S2—C36 | 1.729 (2) | C19—H19A | 0.9700 |
O1—C10 | 1.350 (3) | C19—H19B | 0.9700 |
O1—H1O | 0.82 (3) | C20—H20A | 0.9700 |
O2—C31 | 1.343 (3) | C20—H20B | 0.9700 |
O2—H2O | 0.82 (3) | C22—C31 | 1.400 (3) |
N1—C11 | 1.292 (3) | C22—C32 | 1.436 (3) |
N1—C12 | 1.380 (3) | C22—C23 | 1.445 (3) |
N2—C21 | 1.135 (3) | C23—C24 | 1.412 (3) |
N3—C32 | 1.290 (3) | C23—C28 | 1.420 (3) |
N3—C33 | 1.385 (3) | C24—C25 | 1.368 (4) |
N4—C42 | 1.137 (3) | C24—H24 | 0.9300 |
C1—C10 | 1.398 (3) | C25—C26 | 1.391 (4) |
C1—C11 | 1.435 (3) | C25—H25 | 0.9300 |
C1—C2 | 1.439 (3) | C26—C27 | 1.356 (4) |
C2—C3 | 1.411 (3) | C26—H26 | 0.9300 |
C2—C7 | 1.420 (3) | C27—C28 | 1.408 (4) |
C3—C4 | 1.368 (4) | C27—H27 | 0.9300 |
C3—H3 | 0.9300 | C28—C29 | 1.420 (4) |
C4—C5 | 1.403 (4) | C29—C30 | 1.349 (4) |
C4—H4 | 0.9300 | C29—H29 | 0.9300 |
C5—C6 | 1.343 (4) | C30—C31 | 1.410 (3) |
C5—H5 | 0.9300 | C30—H30 | 0.9300 |
C6—C7 | 1.410 (4) | C32—H32 | 0.9300 |
C6—H6 | 0.9300 | C33—C34 | 1.373 (3) |
C7—C8 | 1.413 (4) | C34—C35 | 1.430 (3) |
C8—C9 | 1.346 (4) | C34—C42 | 1.432 (3) |
C8—H8 | 0.9300 | C35—C36 | 1.359 (3) |
C9—C10 | 1.403 (3) | C35—C41 | 1.507 (3) |
C9—H9 | 0.9300 | C36—C37 | 1.505 (3) |
C11—H11 | 0.9300 | C37—C38 | 1.495 (5) |
C12—C13 | 1.368 (3) | C37—H37A | 0.9700 |
C13—C14 | 1.421 (3) | C37—H37B | 0.9700 |
C13—C21 | 1.428 (3) | C38—C39 | 1.522 (5) |
C14—C15 | 1.358 (4) | C38—H38A | 0.9700 |
C14—C20 | 1.511 (4) | C38—H38B | 0.9700 |
C15—C16 | 1.513 (3) | C39—C40 | 1.501 (4) |
C16—C17 | 1.457 (5) | C39—H39A | 0.9700 |
C16—H16A | 0.9700 | C39—H39B | 0.9700 |
C16—H16B | 0.9700 | C40—C41 | 1.500 (4) |
C17—C18 | 1.522 (5) | C40—H40A | 0.9700 |
C17—H17A | 0.9700 | C40—H40B | 0.9700 |
C17—H17B | 0.9700 | C41—H41A | 0.9700 |
C18—C19 | 1.511 (5) | C41—H41B | 0.9700 |
C12—S1—C15 | 91.95 (11) | C14—C20—H20B | 108.2 |
C33—S2—C36 | 92.41 (11) | H20A—C20—H20B | 107.4 |
C10—O1—H1O | 108 (2) | N2—C21—C13 | 178.8 (4) |
C31—O2—H2O | 106 (2) | C31—C22—C32 | 120.4 (2) |
C11—N1—C12 | 121.09 (19) | C31—C22—C23 | 118.5 (2) |
C32—N3—C33 | 121.3 (2) | C32—C22—C23 | 121.0 (2) |
C10—C1—C11 | 120.3 (2) | C24—C23—C28 | 117.3 (2) |
C10—C1—C2 | 118.7 (2) | C24—C23—C22 | 123.5 (2) |
C11—C1—C2 | 121.0 (2) | C28—C23—C22 | 119.2 (2) |
C3—C2—C7 | 117.5 (2) | C25—C24—C23 | 121.1 (3) |
C3—C2—C1 | 123.7 (2) | C25—C24—H24 | 119.5 |
C7—C2—C1 | 118.8 (2) | C23—C24—H24 | 119.5 |
C4—C3—C2 | 121.1 (3) | C24—C25—C26 | 121.2 (3) |
C4—C3—H3 | 119.4 | C24—C25—H25 | 119.4 |
C2—C3—H3 | 119.4 | C26—C25—H25 | 119.4 |
C3—C4—C5 | 120.6 (3) | C27—C26—C25 | 119.3 (3) |
C3—C4—H4 | 119.7 | C27—C26—H26 | 120.3 |
C5—C4—H4 | 119.7 | C25—C26—H26 | 120.3 |
C6—C5—C4 | 119.9 (3) | C26—C27—C28 | 121.4 (3) |
C6—C5—H5 | 120.0 | C26—C27—H27 | 119.3 |
C4—C5—H5 | 120.0 | C28—C27—H27 | 119.3 |
C5—C6—C7 | 121.3 (3) | C27—C28—C23 | 119.7 (2) |
C5—C6—H6 | 119.3 | C27—C28—C29 | 121.3 (2) |
C7—C6—H6 | 119.3 | C23—C28—C29 | 118.9 (2) |
C6—C7—C8 | 121.1 (2) | C30—C29—C28 | 122.0 (2) |
C6—C7—C2 | 119.6 (3) | C30—C29—H29 | 119.0 |
C8—C7—C2 | 119.3 (2) | C28—C29—H29 | 119.0 |
C9—C8—C7 | 121.8 (2) | C29—C30—C31 | 120.0 (2) |
C9—C8—H8 | 119.1 | C29—C30—H30 | 120.0 |
C7—C8—H8 | 119.1 | C31—C30—H30 | 120.0 |
C8—C9—C10 | 120.2 (2) | O2—C31—C22 | 122.3 (2) |
C8—C9—H9 | 119.9 | O2—C31—C30 | 116.4 (2) |
C10—C9—H9 | 119.9 | C22—C31—C30 | 121.3 (2) |
O1—C10—C1 | 122.3 (2) | N3—C32—C22 | 122.5 (2) |
O1—C10—C9 | 116.5 (2) | N3—C32—H32 | 118.8 |
C1—C10—C9 | 121.2 (2) | C22—C32—H32 | 118.8 |
N1—C11—C1 | 122.6 (2) | C34—C33—N3 | 124.3 (2) |
N1—C11—H11 | 118.7 | C34—C33—S2 | 109.85 (17) |
C1—C11—H11 | 118.7 | N3—C33—S2 | 125.82 (17) |
C13—C12—N1 | 124.44 (19) | C33—C34—C35 | 114.5 (2) |
C13—C12—S1 | 110.22 (16) | C33—C34—C42 | 121.3 (2) |
N1—C12—S1 | 125.31 (16) | C35—C34—C42 | 124.2 (2) |
C12—C13—C14 | 114.3 (2) | C36—C35—C34 | 111.1 (2) |
C12—C13—C21 | 121.6 (2) | C36—C35—C41 | 126.1 (2) |
C14—C13—C21 | 124.1 (2) | C34—C35—C41 | 122.7 (2) |
C15—C14—C13 | 111.3 (2) | C35—C36—C37 | 130.1 (2) |
C15—C14—C20 | 125.0 (3) | C35—C36—S2 | 112.13 (18) |
C13—C14—C20 | 123.5 (2) | C37—C36—S2 | 117.67 (19) |
C14—C15—C16 | 129.1 (3) | C38—C37—C36 | 115.8 (3) |
C14—C15—S1 | 112.15 (18) | C38—C37—H37A | 108.3 |
C16—C15—S1 | 118.6 (2) | C36—C37—H37A | 108.3 |
C17—C16—C15 | 115.8 (3) | C38—C37—H37B | 108.3 |
C17—C16—H16A | 108.3 | C36—C37—H37B | 108.3 |
C15—C16—H16A | 108.3 | H37A—C37—H37B | 107.4 |
C17—C16—H16B | 108.3 | C37—C38—C39 | 116.0 (3) |
C15—C16—H16B | 108.3 | C37—C38—H38A | 108.3 |
H16A—C16—H16B | 107.4 | C39—C38—H38A | 108.3 |
C16—C17—C18 | 117.1 (3) | C37—C38—H38B | 108.3 |
C16—C17—H17A | 108.0 | C39—C38—H38B | 108.3 |
C18—C17—H17A | 108.0 | H38A—C38—H38B | 107.4 |
C16—C17—H17B | 108.0 | C40—C39—C38 | 114.5 (2) |
C18—C17—H17B | 108.0 | C40—C39—H39A | 108.6 |
H17A—C17—H17B | 107.3 | C38—C39—H39A | 108.6 |
C19—C18—C17 | 115.7 (3) | C40—C39—H39B | 108.6 |
C19—C18—H18A | 108.3 | C38—C39—H39B | 108.6 |
C17—C18—H18A | 108.3 | H39A—C39—H39B | 107.6 |
C19—C18—H18B | 108.3 | C41—C40—C39 | 117.8 (3) |
C17—C18—H18B | 108.3 | C41—C40—H40A | 107.8 |
H18A—C18—H18B | 107.4 | C39—C40—H40A | 107.8 |
C20—C19—C18 | 116.8 (4) | C41—C40—H40B | 107.8 |
C20—C19—H19A | 108.1 | C39—C40—H40B | 107.8 |
C18—C19—H19A | 108.1 | H40A—C40—H40B | 107.2 |
C20—C19—H19B | 108.1 | C40—C41—C35 | 117.2 (2) |
C18—C19—H19B | 108.1 | C40—C41—H41A | 108.0 |
H19A—C19—H19B | 107.3 | C35—C41—H41A | 108.0 |
C19—C20—C14 | 116.3 (3) | C40—C41—H41B | 108.0 |
C19—C20—H20A | 108.2 | C35—C41—H41B | 108.0 |
C14—C20—H20A | 108.2 | H41A—C41—H41B | 107.2 |
C19—C20—H20B | 108.2 | N4—C42—C34 | 178.7 (4) |
C10—C1—C2—C3 | 179.8 (2) | C31—C22—C23—C24 | −177.8 (2) |
C11—C1—C2—C3 | 1.0 (4) | C32—C22—C23—C24 | 4.0 (4) |
C10—C1—C2—C7 | 0.5 (3) | C31—C22—C23—C28 | 1.4 (4) |
C11—C1—C2—C7 | −178.3 (2) | C32—C22—C23—C28 | −176.8 (2) |
C7—C2—C3—C4 | 0.0 (4) | C28—C23—C24—C25 | 1.0 (4) |
C1—C2—C3—C4 | −179.3 (3) | C22—C23—C24—C25 | −179.8 (3) |
C2—C3—C4—C5 | −0.4 (5) | C23—C24—C25—C26 | −0.7 (5) |
C3—C4—C5—C6 | 0.5 (5) | C24—C25—C26—C27 | 0.3 (5) |
C4—C5—C6—C7 | −0.2 (5) | C25—C26—C27—C28 | −0.2 (5) |
C5—C6—C7—C8 | 179.5 (3) | C26—C27—C28—C23 | 0.4 (4) |
C5—C6—C7—C2 | −0.2 (4) | C26—C27—C28—C29 | 179.7 (3) |
C3—C2—C7—C6 | 0.3 (4) | C24—C23—C28—C27 | −0.8 (4) |
C1—C2—C7—C6 | 179.7 (2) | C22—C23—C28—C27 | 179.9 (2) |
C3—C2—C7—C8 | −179.5 (2) | C24—C23—C28—C29 | 179.9 (2) |
C1—C2—C7—C8 | −0.1 (4) | C22—C23—C28—C29 | 0.6 (4) |
C6—C7—C8—C9 | −179.9 (3) | C27—C28—C29—C30 | 178.9 (3) |
C2—C7—C8—C9 | −0.1 (4) | C23—C28—C29—C30 | −1.8 (4) |
C7—C8—C9—C10 | −0.1 (4) | C28—C29—C30—C31 | 0.9 (4) |
C11—C1—C10—O1 | −1.1 (4) | C32—C22—C31—O2 | −3.0 (4) |
C2—C1—C10—O1 | −179.9 (2) | C23—C22—C31—O2 | 178.8 (2) |
C11—C1—C10—C9 | 178.1 (2) | C32—C22—C31—C30 | 175.8 (2) |
C2—C1—C10—C9 | −0.8 (4) | C23—C22—C31—C30 | −2.4 (4) |
C8—C9—C10—O1 | 179.8 (2) | C29—C30—C31—O2 | −179.9 (2) |
C8—C9—C10—C1 | 0.6 (4) | C29—C30—C31—C22 | 1.3 (4) |
C12—N1—C11—C1 | 179.2 (2) | C33—N3—C32—C22 | −177.8 (2) |
C10—C1—C11—N1 | −1.4 (4) | C31—C22—C32—N3 | 1.2 (4) |
C2—C1—C11—N1 | 177.5 (2) | C23—C22—C32—N3 | 179.3 (2) |
C11—N1—C12—C13 | 178.9 (2) | C32—N3—C33—C34 | 178.7 (2) |
C11—N1—C12—S1 | −3.1 (3) | C32—N3—C33—S2 | −1.7 (3) |
C15—S1—C12—C13 | 1.5 (2) | C36—S2—C33—C34 | −0.2 (2) |
C15—S1—C12—N1 | −176.7 (2) | C36—S2—C33—N3 | −179.8 (2) |
N1—C12—C13—C14 | 177.1 (2) | N3—C33—C34—C35 | 179.7 (2) |
S1—C12—C13—C14 | −1.1 (3) | S2—C33—C34—C35 | 0.1 (3) |
N1—C12—C13—C21 | −2.2 (4) | N3—C33—C34—C42 | −1.2 (4) |
S1—C12—C13—C21 | 179.5 (2) | S2—C33—C34—C42 | 179.2 (2) |
C12—C13—C14—C15 | −0.1 (4) | C33—C34—C35—C36 | 0.2 (3) |
C21—C13—C14—C15 | 179.3 (3) | C42—C34—C35—C36 | −178.9 (3) |
C12—C13—C14—C20 | −176.0 (3) | C33—C34—C35—C41 | 177.8 (2) |
C21—C13—C14—C20 | 3.4 (5) | C42—C34—C35—C41 | −1.3 (4) |
C13—C14—C15—C16 | −174.5 (3) | C34—C35—C36—C37 | 175.1 (3) |
C20—C14—C15—C16 | 1.3 (6) | C41—C35—C36—C37 | −2.5 (5) |
C13—C14—C15—S1 | 1.3 (4) | C34—C35—C36—S2 | −0.3 (3) |
C20—C14—C15—S1 | 177.1 (3) | C41—C35—C36—S2 | −177.9 (2) |
C12—S1—C15—C14 | −1.6 (3) | C33—S2—C36—C35 | 0.3 (2) |
C12—S1—C15—C16 | 174.6 (3) | C33—S2—C36—C37 | −175.7 (2) |
C14—C15—C16—C17 | −48.8 (6) | C35—C36—C37—C38 | 47.0 (5) |
S1—C15—C16—C17 | 135.7 (3) | S2—C36—C37—C38 | −137.9 (3) |
C15—C16—C17—C18 | 66.1 (5) | C36—C37—C38—C39 | −66.9 (4) |
C16—C17—C18—C19 | −67.5 (5) | C37—C38—C39—C40 | 71.3 (4) |
C17—C18—C19—C20 | 69.4 (5) | C38—C39—C40—C41 | −71.0 (4) |
C18—C19—C20—C14 | −70.2 (5) | C39—C40—C41—C35 | 65.8 (4) |
C15—C14—C20—C19 | 48.6 (6) | C36—C35—C41—C40 | −42.6 (4) |
C13—C14—C20—C19 | −136.1 (4) | C34—C35—C41—C40 | 140.1 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···N1 | 0.82 (3) | 1.84 (3) | 2.578 (2) | 150 (3) |
O2—H2O···N3 | 0.82 (3) | 1.84 (3) | 2.582 (2) | 151 (3) |
Experimental details
Crystal data | |
Chemical formula | C21H18N2OS |
Mr | 346.43 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 296 |
a, b, c (Å) | 13.5472 (2), 14.4747 (4), 35.7902 (6) |
V (Å3) | 7018.2 (2) |
Z | 16 |
Radiation type | Cu Kα |
µ (mm−1) | 1.71 |
Crystal size (mm) | 0.37 × 0.21 × 0.14 |
Data collection | |
Diffractometer | Agilent SuperNova (Dual, Cu at zero, Atlas, CCD) diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2012) |
Tmin, Tmax | 0.858, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 28490, 7066, 5288 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.626 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.161, 1.02 |
No. of reflections | 7066 |
No. of parameters | 457 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.52, −0.25 |
Computer programs: CrysAlis PRO (Agilent, 2012), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009), WinGX (Farrugia, 2012) and X-SEED (Barbour, 2001).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···N1 | 0.82 (3) | 1.84 (3) | 2.578 (2) | 150 (3) |
O2—H2O···N3 | 0.82 (3) | 1.84 (3) | 2.582 (2) | 151 (3) |
Acknowledgements
The authors would like to thank the Deanship of Scientific Research at King Abdulaziz University for the support of this research via Research Group Track grant No. 3–102/428.
References
Agilent (2012). CrysAlis PRO. Agilent Technologies, Yarnton, England. Google Scholar
Asiri, A. M., Khan, S. A. & Tahir, M. N. (2011a). Acta Cryst. E67, o2254. Web of Science CSD CrossRef IUCr Journals Google Scholar
Asiri, A. M., Khan, S. A. & Tahir, M. N. (2011b). Acta Cryst. E67, o2355. Web of Science CSD CrossRef IUCr Journals Google Scholar
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In extension of synthesis of Schiff bases containing a thiophene (Asiri et al. 2011a; 2011b) residue, we herein report the crystal structure of title compound.
The title compound (I), Fig. 1, crystallized with two molecules per asymmetric unit. The cycloheptyl ring adopted a chair conformation in each molecule with the r. m. s. deviations being 0.2345 (4) & 0.2302 (4) Å, respectively. The naphthalene ring system is inclined at dihedral angle of 4.97 (4) & 16.13 (1)° with respect to the planes produced from best fitted atoms of thiophene and cycloheptyl rings, respectively in molecule A while the corresponding inclination angles in molecule B are 4.16 (1) & 11.48 (5)°. The thiophene and cycloheptyl rings planes are oriented at dihedral angles of 16.10 (7)° and 15.22 (6)° with respect to each other in molecules A & B. Only intramolecular O—H···N classical hydrogen bonding is observed in both molecules which generates planar six-membered ring motifs S(6) (Bernstein et al., 1995) with r. m. s. deviations of 0.0099 (1) & 0.0286 (1) Å from the least-squares planes of member atoms, see Table 1 for details.