organic compounds
(1′S,12′R,13′S,17′S)-15′,15′-Dimethyl-1,2-dihydro-11′,14′,16′,18′-tetraoxa-7′-azaspiro[indole-3,8′-pentacyclo[10.6.0.02,9.03,7.013,17]octadecane]-2,10′-dione
aDepartment of Physics, Presidency College, Chennai 600 005, India, bDepartment of Computer Science & Engineering, Madha Engineering College, Kundrathur, Chennai 600 069, India, and cDepartment of Organic Chemistry, University of Madras, Chennai 600 025, India
*Correspondence e-mail: aravindhanpresidency@gmail.com
In the title compound, C22H24N2O6, the indole ring has a twist conformation and the tetrahydro-2H-pyran-2-one ring a half-chair conformation. One of the pyrrolidine rings adopts an on the N atom, while the other has a twist conformation; the `butterfly' angle between their mean planes is 62.98 (11)°. The dioxolane ring adopts a twist conformation and the tetrahydrofuran ring has an on the C atom in the fused tetrahydro-2H-pyran-2-one ring adjacent to the O atom of the tetrahydrofuran ring. The `butterfly' angle between the mean planes of these two five-membered rings is 69.14 (10)°. In the crystal, molecules are linked by N—H⋯O hydrogen bonds, forming chains along the a axis.
Related literature
For the biological activity of indole derivatives, see: Stevenson et al. (2000); Rajeswaran et al. (1999); Amal Raj et al. (2003). For a related structure, see: Jagadeesan et al. (2012).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536813005436/su2563sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813005436/su2563Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813005436/su2563Isup3.cml
A solution of 5,6-Dideoxy-l,2-O-isopropylidene-a-D-xylo-hept-5-enofuranurono-7,3-lactone (300 mg, 1.5 mmol), sarcosine (125 mg, 1.5 mmol) and isatin (210 mg, 1.5 mmol) were refluxed in dry toluene under a N2 atmosphere for 6–8 h at 383 K using a Dean-Stark apparatus. After the completion of the reaction as indicated by TLC, toluene was evaporated under reduced pressure. The crude product was washed with water and extracted with dichloromethane (4 × 20mL). The combined organic layers were dried (MgSO4) and filtered, concentrated in vacuum. The crude product was purified by
using hexane:EtOAc (7:3) mixture as On slow evaporation of the solvents colourless block-like crystals were obtained.The methine and methylene H atoms were included in calculated positions freely refined. The remainder of the H atoms were included in calculated positions and allowed to ride on their parent atom: C—H = 0.93 - 0.96 Å, N-H = 0.86 Å, with Uiso = 1.5Ueq(C-methyl), and = 1.2Ueq(C,N) for other H atoms.
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).C22H24N2O6 | F(000) = 872 |
Mr = 412.43 | Dx = 1.345 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 8834 reflections |
a = 9.2737 (5) Å | θ = 2.1–31.2° |
b = 11.6543 (8) Å | µ = 0.10 mm−1 |
c = 18.8489 (14) Å | T = 293 K |
V = 2037.2 (2) Å3 | Block, colourless |
Z = 4 | 0.30 × 0.30 × 0.20 mm |
Bruker Kappa APEXII CCD diffractometer | 4717 independent reflections |
Radiation source: fine-focus sealed tube | 3800 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
ω and ϕ scan | θmax = 27.6°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Bruker 2008) | h = −6→12 |
Tmin = 0.922, Tmax = 0.947 | k = −15→14 |
21465 measured reflections | l = −24→24 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.037 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.090 | w = 1/[σ2(Fo2) + (0.0451P)2 + 0.1058P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.002 |
4717 reflections | Δρmax = 0.16 e Å−3 |
324 parameters | Δρmin = −0.16 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0043 (7) |
C22H24N2O6 | V = 2037.2 (2) Å3 |
Mr = 412.43 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 9.2737 (5) Å | µ = 0.10 mm−1 |
b = 11.6543 (8) Å | T = 293 K |
c = 18.8489 (14) Å | 0.30 × 0.30 × 0.20 mm |
Bruker Kappa APEXII CCD diffractometer | 4717 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker 2008) | 3800 reflections with I > 2σ(I) |
Tmin = 0.922, Tmax = 0.947 | Rint = 0.036 |
21465 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | 0 restraints |
wR(F2) = 0.090 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.16 e Å−3 |
4717 reflections | Δρmin = −0.16 e Å−3 |
324 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
H9A | 0.090 (2) | 0.2846 (19) | 0.0396 (11) | 0.064 (6)* | |
H11A | 0.384 (2) | 0.2235 (18) | 0.1817 (11) | 0.059 (6)* | |
H11B | 0.251 (2) | 0.278 (2) | 0.2138 (12) | 0.078 (7)* | |
H10B | 0.242 (3) | 0.136 (3) | 0.1028 (15) | 0.109 (10)* | |
H10A | 0.115 (4) | 0.178 (4) | 0.1375 (19) | 0.162 (15)* | |
H12 | 0.3470 (19) | 0.4460 (16) | 0.1690 (10) | 0.044 (5)* | |
H9B | 0.251 (2) | 0.2576 (16) | 0.0170 (10) | 0.051 (5)* | |
H17 | 0.6125 (17) | 0.3803 (14) | 0.1785 (9) | 0.031 (4)* | |
H16 | 0.5679 (19) | 0.5796 (16) | 0.1708 (10) | 0.041 (5)* | |
H14 | 0.4660 (17) | 0.4184 (14) | −0.0175 (9) | 0.034 (4)* | |
H18 | 0.929 (2) | 0.4543 (16) | 0.0878 (10) | 0.049 (5)* | |
H13 | 0.4947 (16) | 0.3027 (15) | 0.0749 (8) | 0.030 (4)* | |
H19 | 0.8300 (18) | 0.6200 (17) | 0.1434 (9) | 0.042 (5)* | |
O4 | 0.74044 (11) | 0.37954 (10) | 0.09447 (6) | 0.0428 (3) | |
O1 | 0.30443 (14) | 0.64064 (10) | 0.11353 (7) | 0.0494 (3) | |
C13 | 0.48045 (16) | 0.37792 (13) | 0.08903 (9) | 0.0321 (3) | |
O2 | 0.51578 (14) | 0.62812 (10) | −0.03068 (7) | 0.0553 (4) | |
N2 | 0.22433 (13) | 0.39789 (11) | 0.08173 (7) | 0.0343 (3) | |
O3 | 0.62164 (13) | 0.59996 (10) | 0.07089 (7) | 0.0458 (3) | |
O6 | 0.79932 (13) | 0.52782 (12) | 0.23306 (6) | 0.0519 (3) | |
O5 | 0.91693 (13) | 0.38056 (12) | 0.18080 (7) | 0.0553 (4) | |
N1 | 0.14101 (17) | 0.64572 (13) | 0.02193 (9) | 0.0517 (4) | |
H1 | 0.0942 | 0.7067 | 0.0334 | 0.062* | |
C14 | 0.44834 (16) | 0.45548 (13) | 0.02581 (9) | 0.0321 (3) | |
C17 | 0.61096 (16) | 0.41353 (14) | 0.13092 (9) | 0.0346 (3) | |
C5 | 0.20045 (16) | 0.48417 (13) | −0.03945 (9) | 0.0364 (4) | |
C12 | 0.33988 (16) | 0.37913 (14) | 0.13385 (9) | 0.0353 (4) | |
C7 | 0.24724 (18) | 0.59935 (14) | 0.06148 (9) | 0.0392 (4) | |
C11 | 0.3016 (2) | 0.26639 (17) | 0.17006 (12) | 0.0498 (5) | |
C16 | 0.63188 (18) | 0.54190 (14) | 0.13806 (9) | 0.0382 (4) | |
C8 | 0.11618 (19) | 0.58297 (15) | −0.03980 (10) | 0.0465 (4) | |
C4 | 0.20154 (18) | 0.41338 (15) | −0.09800 (9) | 0.0435 (4) | |
H4 | 0.2601 | 0.3486 | −0.0991 | 0.052* | |
C6 | 0.28163 (15) | 0.47975 (12) | 0.02961 (8) | 0.0329 (3) | |
C15 | 0.53006 (18) | 0.56665 (14) | 0.02019 (9) | 0.0386 (4) | |
C9 | 0.1869 (2) | 0.28246 (15) | 0.05469 (11) | 0.0471 (4) | |
C19 | 0.78866 (19) | 0.54907 (17) | 0.15952 (10) | 0.0439 (4) | |
C20 | 0.91327 (19) | 0.4474 (2) | 0.24389 (11) | 0.0555 (5) | |
C1 | 0.0264 (2) | 0.6093 (2) | −0.09595 (12) | 0.0644 (6) | |
H1A | −0.0322 | 0.6740 | −0.0951 | 0.077* | |
C3 | 0.1137 (2) | 0.44023 (19) | −0.15530 (10) | 0.0558 (5) | |
H3 | 0.1136 | 0.3933 | −0.1952 | 0.067* | |
C18 | 0.85583 (18) | 0.44176 (16) | 0.12504 (10) | 0.0437 (4) | |
C2 | 0.0269 (2) | 0.5360 (2) | −0.15326 (12) | 0.0688 (6) | |
H2 | −0.0330 | 0.5516 | −0.1916 | 0.083* | |
C10 | 0.2036 (3) | 0.2056 (2) | 0.11837 (16) | 0.0706 (7) | |
C21 | 1.0539 (2) | 0.5104 (3) | 0.25265 (17) | 0.0961 (10) | |
H21B | 1.1302 | 0.4561 | 0.2602 | 0.144* | |
H21C | 1.0476 | 0.5610 | 0.2927 | 0.144* | |
H21A | 1.0736 | 0.5542 | 0.2106 | 0.144* | |
C22 | 0.8736 (3) | 0.3709 (3) | 0.30471 (13) | 0.0978 (10) | |
H22A | 0.9498 | 0.3167 | 0.3128 | 0.147* | |
H22C | 0.7862 | 0.3306 | 0.2937 | 0.147* | |
H22B | 0.8595 | 0.4165 | 0.3466 | 0.147* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O4 | 0.0336 (5) | 0.0432 (6) | 0.0518 (7) | 0.0007 (5) | 0.0049 (5) | −0.0152 (6) |
O1 | 0.0596 (7) | 0.0338 (6) | 0.0546 (8) | 0.0031 (5) | −0.0002 (6) | −0.0115 (6) |
C13 | 0.0352 (7) | 0.0216 (8) | 0.0394 (9) | 0.0007 (6) | 0.0028 (6) | −0.0012 (7) |
O2 | 0.0696 (8) | 0.0466 (7) | 0.0496 (8) | −0.0215 (6) | −0.0061 (6) | 0.0149 (6) |
N2 | 0.0331 (6) | 0.0280 (6) | 0.0419 (7) | −0.0016 (5) | 0.0016 (5) | 0.0005 (6) |
O3 | 0.0509 (7) | 0.0329 (6) | 0.0535 (7) | −0.0120 (6) | −0.0089 (6) | 0.0030 (6) |
O6 | 0.0454 (7) | 0.0664 (9) | 0.0441 (7) | 0.0126 (6) | −0.0043 (5) | −0.0161 (6) |
O5 | 0.0511 (7) | 0.0602 (9) | 0.0545 (8) | 0.0143 (6) | −0.0071 (6) | −0.0121 (7) |
N1 | 0.0562 (9) | 0.0333 (8) | 0.0657 (10) | 0.0160 (7) | −0.0051 (8) | −0.0021 (8) |
C14 | 0.0336 (7) | 0.0280 (8) | 0.0346 (8) | −0.0032 (6) | 0.0036 (6) | −0.0044 (7) |
C17 | 0.0335 (8) | 0.0327 (8) | 0.0375 (9) | 0.0038 (6) | 0.0040 (7) | −0.0002 (7) |
C5 | 0.0356 (8) | 0.0292 (8) | 0.0444 (9) | −0.0045 (6) | −0.0007 (7) | 0.0028 (7) |
C12 | 0.0367 (8) | 0.0330 (8) | 0.0362 (9) | 0.0007 (7) | 0.0041 (6) | 0.0002 (7) |
C7 | 0.0423 (8) | 0.0278 (8) | 0.0474 (10) | 0.0007 (7) | 0.0057 (8) | −0.0012 (7) |
C11 | 0.0486 (10) | 0.0453 (11) | 0.0554 (12) | −0.0017 (9) | 0.0066 (9) | 0.0142 (9) |
C16 | 0.0405 (8) | 0.0339 (9) | 0.0402 (9) | −0.0007 (7) | −0.0011 (7) | −0.0050 (7) |
C8 | 0.0477 (9) | 0.0358 (9) | 0.0559 (11) | 0.0019 (8) | −0.0069 (9) | 0.0064 (9) |
C4 | 0.0430 (9) | 0.0398 (9) | 0.0478 (10) | −0.0094 (8) | −0.0006 (8) | −0.0002 (8) |
C6 | 0.0336 (7) | 0.0245 (7) | 0.0404 (9) | −0.0003 (6) | 0.0016 (6) | −0.0007 (7) |
C15 | 0.0412 (8) | 0.0328 (8) | 0.0418 (9) | −0.0052 (7) | 0.0030 (7) | 0.0011 (8) |
C9 | 0.0533 (11) | 0.0297 (9) | 0.0584 (12) | −0.0073 (8) | 0.0010 (10) | −0.0008 (8) |
C19 | 0.0434 (9) | 0.0417 (10) | 0.0466 (10) | −0.0042 (8) | −0.0017 (8) | −0.0079 (8) |
C20 | 0.0406 (9) | 0.0743 (14) | 0.0518 (11) | 0.0117 (9) | −0.0063 (8) | −0.0156 (11) |
C1 | 0.0631 (12) | 0.0561 (12) | 0.0740 (15) | 0.0123 (11) | −0.0187 (11) | 0.0104 (11) |
C3 | 0.0543 (11) | 0.0626 (13) | 0.0504 (11) | −0.0167 (10) | −0.0088 (9) | −0.0014 (10) |
C18 | 0.0340 (8) | 0.0526 (11) | 0.0445 (10) | −0.0053 (7) | 0.0061 (8) | −0.0099 (9) |
C2 | 0.0627 (13) | 0.0754 (15) | 0.0684 (15) | −0.0042 (12) | −0.0246 (11) | 0.0161 (13) |
C10 | 0.0868 (17) | 0.0419 (12) | 0.0830 (17) | −0.0201 (12) | −0.0164 (14) | 0.0179 (12) |
C21 | 0.0457 (12) | 0.119 (2) | 0.123 (2) | 0.0087 (14) | −0.0179 (13) | −0.057 (2) |
C22 | 0.108 (2) | 0.126 (3) | 0.0594 (15) | 0.040 (2) | −0.0009 (14) | 0.0199 (17) |
O4—C18 | 1.415 (2) | C7—C6 | 1.551 (2) |
O4—C17 | 1.4390 (18) | C11—C10 | 1.509 (3) |
O1—C7 | 1.215 (2) | C11—H11A | 0.94 (2) |
C13—C17 | 1.503 (2) | C11—H11B | 0.96 (2) |
C13—C14 | 1.525 (2) | C16—C19 | 1.511 (2) |
C13—C12 | 1.553 (2) | C16—H16 | 0.962 (19) |
C13—H13 | 0.925 (17) | C8—C1 | 1.381 (3) |
O2—C15 | 1.204 (2) | C4—C3 | 1.388 (3) |
N2—C6 | 1.469 (2) | C4—H4 | 0.9300 |
N2—C12 | 1.470 (2) | C9—C10 | 1.506 (3) |
N2—C9 | 1.480 (2) | C9—H9A | 0.95 (2) |
O3—C15 | 1.336 (2) | C9—H9B | 0.97 (2) |
O3—C16 | 1.439 (2) | C19—C18 | 1.541 (2) |
O6—C19 | 1.411 (2) | C19—H19 | 0.961 (19) |
O6—C20 | 1.427 (2) | C20—C22 | 1.498 (3) |
O5—C18 | 1.391 (2) | C20—C21 | 1.505 (3) |
O5—C20 | 1.422 (2) | C1—C2 | 1.377 (3) |
N1—C7 | 1.348 (2) | C1—H1A | 0.9300 |
N1—C8 | 1.393 (2) | C3—C2 | 1.376 (3) |
N1—H1 | 0.8600 | C3—H3 | 0.9300 |
C14—C15 | 1.505 (2) | C18—H18 | 0.985 (19) |
C14—C6 | 1.573 (2) | C2—H2 | 0.9300 |
C14—H14 | 0.938 (17) | C10—H10B | 0.93 (3) |
C17—C16 | 1.515 (2) | C10—H10A | 0.95 (4) |
C17—H17 | 0.977 (17) | C21—H21B | 0.9600 |
C5—C4 | 1.378 (2) | C21—H21C | 0.9600 |
C5—C8 | 1.392 (2) | C21—H21A | 0.9600 |
C5—C6 | 1.505 (2) | C22—H22A | 0.9600 |
C12—C11 | 1.523 (2) | C22—H22C | 0.9600 |
C12—H12 | 1.026 (19) | C22—H22B | 0.9600 |
C18—O4—C17 | 107.19 (11) | N2—C6—C7 | 104.49 (12) |
C17—C13—C14 | 113.82 (13) | C5—C6—C7 | 101.62 (13) |
C17—C13—C12 | 112.80 (14) | N2—C6—C14 | 105.62 (12) |
C14—C13—C12 | 104.82 (12) | C5—C6—C14 | 117.28 (13) |
C17—C13—H13 | 107.3 (10) | C7—C6—C14 | 112.42 (12) |
C14—C13—H13 | 111.4 (10) | O2—C15—O3 | 117.81 (14) |
C12—C13—H13 | 106.6 (10) | O2—C15—C14 | 120.85 (15) |
C6—N2—C12 | 106.25 (11) | O3—C15—C14 | 121.33 (15) |
C6—N2—C9 | 116.41 (13) | N2—C9—C10 | 104.02 (17) |
C12—N2—C9 | 105.42 (13) | N2—C9—H9A | 107.6 (14) |
C15—O3—C16 | 122.32 (12) | C10—C9—H9A | 110.7 (13) |
C19—O6—C20 | 107.92 (14) | N2—C9—H9B | 112.2 (11) |
C18—O5—C20 | 109.96 (15) | C10—C9—H9B | 110.0 (11) |
C7—N1—C8 | 111.83 (14) | H9A—C9—H9B | 112.0 (17) |
C7—N1—H1 | 124.1 | O6—C19—C16 | 108.69 (15) |
C8—N1—H1 | 124.1 | O6—C19—C18 | 104.10 (15) |
C15—C14—C13 | 117.84 (13) | C16—C19—C18 | 103.36 (14) |
C15—C14—C6 | 110.08 (13) | O6—C19—H19 | 115.7 (10) |
C13—C14—C6 | 105.24 (12) | C16—C19—H19 | 110.3 (10) |
C15—C14—H14 | 104.3 (10) | C18—C19—H19 | 113.9 (10) |
C13—C14—H14 | 111.9 (10) | O5—C20—O6 | 104.94 (14) |
C6—C14—H14 | 107.1 (10) | O5—C20—C22 | 108.7 (2) |
O4—C17—C13 | 110.19 (13) | O6—C20—C22 | 108.59 (17) |
O4—C17—C16 | 101.97 (13) | O5—C20—C21 | 109.76 (17) |
C13—C17—C16 | 114.99 (14) | O6—C20—C21 | 109.69 (19) |
O4—C17—H17 | 108.4 (9) | C22—C20—C21 | 114.7 (2) |
C13—C17—H17 | 112.6 (9) | C2—C1—C8 | 117.46 (19) |
C16—C17—H17 | 108.0 (10) | C2—C1—H1A | 121.3 |
C4—C5—C8 | 119.72 (15) | C8—C1—H1A | 121.3 |
C4—C5—C6 | 131.97 (14) | C2—C3—C4 | 120.3 (2) |
C8—C5—C6 | 108.26 (14) | C2—C3—H3 | 119.9 |
N2—C12—C11 | 104.95 (14) | C4—C3—H3 | 119.9 |
N2—C12—C13 | 104.46 (12) | O5—C18—O4 | 110.66 (15) |
C11—C12—C13 | 115.57 (14) | O5—C18—C19 | 105.19 (14) |
N2—C12—H12 | 111.5 (10) | O4—C18—C19 | 106.37 (13) |
C11—C12—H12 | 112.4 (10) | O5—C18—H18 | 109.7 (11) |
C13—C12—H12 | 107.7 (10) | O4—C18—H18 | 107.7 (11) |
O1—C7—N1 | 127.35 (15) | C19—C18—H18 | 117.2 (11) |
O1—C7—C6 | 125.38 (15) | C3—C2—C1 | 121.80 (19) |
N1—C7—C6 | 107.24 (14) | C3—C2—H2 | 119.1 |
C10—C11—C12 | 104.84 (17) | C1—C2—H2 | 119.1 |
C10—C11—H11A | 113.1 (13) | C9—C10—C11 | 107.29 (16) |
C12—C11—H11A | 111.9 (13) | C9—C10—H10B | 107.9 (18) |
C10—C11—H11B | 108.9 (14) | C11—C10—H10B | 112.7 (19) |
C12—C11—H11B | 112.5 (15) | C9—C10—H10A | 114 (2) |
H11A—C11—H11B | 105.7 (18) | C11—C10—H10A | 116 (2) |
O3—C16—C19 | 105.85 (14) | H10B—C10—H10A | 99 (3) |
O3—C16—C17 | 112.20 (14) | C20—C21—H21B | 109.5 |
C19—C16—C17 | 101.63 (14) | C20—C21—H21C | 109.5 |
O3—C16—H16 | 108.0 (11) | H21B—C21—H21C | 109.5 |
C19—C16—H16 | 113.4 (10) | C20—C21—H21A | 109.5 |
C17—C16—H16 | 115.4 (11) | H21B—C21—H21A | 109.5 |
C1—C8—C5 | 121.73 (18) | H21C—C21—H21A | 109.5 |
C1—C8—N1 | 128.53 (18) | C20—C22—H22A | 109.5 |
C5—C8—N1 | 109.73 (15) | C20—C22—H22C | 109.5 |
C5—C4—C3 | 118.93 (17) | H22A—C22—H22C | 109.5 |
C5—C4—H4 | 120.5 | C20—C22—H22B | 109.5 |
C3—C4—H4 | 120.5 | H22A—C22—H22B | 109.5 |
N2—C6—C5 | 114.83 (12) | H22C—C22—H22B | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.86 | 2.06 | 2.8849 (19) | 161 |
Symmetry code: (i) x−1/2, −y+3/2, −z. |
Experimental details
Crystal data | |
Chemical formula | C22H24N2O6 |
Mr | 412.43 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 293 |
a, b, c (Å) | 9.2737 (5), 11.6543 (8), 18.8489 (14) |
V (Å3) | 2037.2 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.30 × 0.30 × 0.20 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker 2008) |
Tmin, Tmax | 0.922, 0.947 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21465, 4717, 3800 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.652 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.090, 1.04 |
No. of reflections | 4717 |
No. of parameters | 324 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.16, −0.16 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.86 | 2.06 | 2.8849 (19) | 161 |
Symmetry code: (i) x−1/2, −y+3/2, −z. |
Acknowledgements
SA and VS thank the UGC, India, for financial support. The authors thank Dr Babu Varghese, Senior Scientific Officer, SAIF, IIT, Chennai, India, for the
data collection.References
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Indole compounds can be used as bioactive drugs (Stevenson et al., 2000) and have also been proven to display high aldose reductase inhibitory activity (Rajeswaran et al., 1999), and antimicrobial and antifungal activities (Amal Raj et al., 2003).
The molecular structure of the title compound is shown in Fig. 1. The indole ring is essentially planar with the maximum deviation from planarity being 0.123 (2) Å for atom C7. Atom O1 deviates from the mean plane of the indole ring by 0.2095 (13) Å. The tetrahydro-2H-pyran-2-one ring (O3/C13-C17) has a half-chair conformation.
The five-membered pyrrolidine ring (N2/C9-C12) adopts an envelope conformation with atom N2 as the flap; it is 0.5267 (12) Å out of the mean plane formed by the other ring atoms. The other pyrrolidine ring (N2/C6/C12-C14) has a twist conformation on bond N2-C12; the "butter-fly" angle between their mean planes is 62.98 (11)°.
The dioxolane ring (O5/O6/C18-C20) adopts a twist conformation on bond O6-C20. The tetrahydrofuran ring (O4/C16-C19) adopts an envelope conformation with atom C17 deviating from the mean plane of the remaining ring atoms by 0.6286 (17) Å; the "butter-fly" angle between the ring mean planes is 69.14 (10) °.
In the crystal, molecules are linked via N-H···O hydrogen bonds forming chains propagating along the a axis direction (Table 1 and Fig. 2).
The title compound exhibits structural similarities with a related structure (Jagadeesan et al., 2012).