metal-organic compounds
catena-Poly[[(1,10-phenanthroline-κ2N,N′)copper(II)]-μ-2,2′-iminodibenzoato-κ4O,O′:O′′,O′′′]
aCEMDRX, Physics Department, University of Coimbra, P-3004-516 Coimbra, Portugal, and bSolid State Group UCQR, IST/ITN, Universidade Técnica de Lisboa, Estrada Nacional 10, 2686-953 Sacavém, Portugal
*Correspondence e-mail: xelo@teor.fis.uc.pt
The structure of the title compound, [Cu(C14H9NO4)(C12H8N2)]n, consists of zigzag polymeric chains along the c axis. The contains one CuII atom which is coordinated by one 2,2′-iminodibenzoate ligand and a one phenanthroline unit. Two intramolecular N—H⋯O hydrogen bonds occur. The supramolecular structure is characterized by weak C—H⋯O hydrogen bonds and π–π stacking interactions, forming a three-dimensional supramolecular network. The shortest centroid–centroid distances between neighbouring phenanthroline aromatic rings and 2,2′-iminodibenzoate rings are 3.684 (1) and 3.640 Å, respectively. The shortest intrachain Cu⋯Cu distance is 7.2885 (9) and the shortest Cu⋯Cu distance between Cu atoms in different chains is 7.1103 (6) Å.
Related literature
For general background to CuII low-dimensional polynuclear magnetic materials, see: Fabelo et al. (2009); Martins et al. (2008a,b); Silva et al. (2001); Yuste et al. (2007, 2008). For structural and coordination information for 2,2′-iminodibenzoic acid, see: Field & Venkataraman (2002); Gao et al. (2009); Lin et al. (2006).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2003); cell SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: WinGX publication routines (Farrugia, 2012).
Supporting information
https://doi.org/10.1107/S1600536813009203/bt6890sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536813009203/bt6890Isup2.hkl
All the reagents, phenanthroline, 2,2'-Iminodibenzoic acid, and the metallic salt Cu(NO3)2.3H2O, were purchased from commercial sources and used as received with no further purifications.
An aqueous solution containing Cu(NO3)2.3H2O (1 mmol, 0.0242 g), Iminodibenzoic acid (1 mmol, 0.0257 g) and phenanthroline, ((2 mmol, 0.0361 g), was stirred during 30 minutes and placed in a 25 mL Teflon-lined autoclave and then heated at 120°C during 48 h. Dark green crystals were obtained by filtration, washed with water and dried in air. Ca. 36% yield based on Cu.
All H atoms could be located in a difference Fourier synthesis but were placed in calculated positions and refined as riding on their parent atoms, using SHELXL (Sheldrick, 2008) defaults.
This work is part of a project of synthesizing low dimensional polynuclear magnetic materials with Copper(II) and oxygen-donors bridging ligands (Fabelo et al., 2009; Martins et al., 2008a; Martins et al., 2008b; Silva et al., 2001; Yuste et al., 2007, 2008).
The target of this work is the use of an aromatic dicarboxylic acid, such as the 2,2'-iminodibenzoic acid, (H2IDC) and another quelate, known as ''coligand'' that will block some coordination positions of the Copper(II) metal ion, modulating the dimensionality of the resulting compound. (Gao et al., 2009; Lin et al., 2006; Yuste et al., 2008).
The structure of this compound consists of neutral chains of formula [Cu(C14H9NO4)(C12H8N2)]n, growing along the c-axis, in a zigzag mode, where the 2,2'-iminodibenzoate (IDC2-) units act as linkers between two Cu(II) ions, in a bis-bidentate mode, and the phenanthroline molecules are placed out-of-chain. The whole compound adopts a three dimensional supramolecular structure by weak π-π stacking. The shortest intra- and interchain copper···copper distances are 7.2885 (9) Å [Cu1···Cu1i; (i) = x, 1 - y, -1/2 + z] and 7.1103 (6) Å [Cu1···Cu1v; (v) = 1/2 - x, 1/2 - y, 1 - z], respectively.
The Copper(II) ion shows a distorted octahedral environment, CuN2O4, due to the Jahn-Teller effect. The equatorial positions are occupied by the two nitrogen atoms from the phenanthroline ligand, [N1 and N2], and two oxygen atoms [O1 and O4], from two different carboxylate units of the IDC2- ligand, varying the distances in a very narrow range of [1.940–2.026 Å]. Another two oxygen atoms [O2 and O3], with bond length values 2.618 (2) and 2.438 (3) Å respectively, are placed in the axial positions. The 2,2'-iminodibenzoate links two neighboring Copper(II) metal ions, being the bite angle 55.19 (11)° [O1—Cu1—O2] and 58.92 (11)° [O3—Cu1ii—O4]. [(ii) = x, -y, -1/2 + z]. The ligand is not planar, with a maximum deviation of 1.472 (5) Å for C10 from the mean plane, being the dihedral angle between the two aromatic rings 52.25 (3)°, which is greater than those already reported (Field et al., 2002; Gao et al., 2009).
Intramolecular hydrogen bond interactions exist inside the 2,2'-iminodibenzoate unit between the nitrogen atom [N1] from the amino group and two oxygen atoms [O2 and O3] from the carboxylate groups. The intermolecular π-π stacking interaction exists in between two aromatic rings of two neighbor phenantrolines and also between the aromatic rings of two neighbor 2,2'-iminodibenzoate moieties. These weak π-π interactions, stabilize the of the complex. The shortest distances 'centroid-to-centroid' between neighbor aromatic ring of two phenantrolines and two neighbor 2,2'-iminodibenzoate are 3.684 (1) and 3.640 Å respectively.
For general background to CuII low-dimensional polynuclear magnetic materials, see: Fabelo et al. (2009); Martins et al. (2008a,b); Silva et al. (2001); Yuste et al. (2007, 2008). For structural and coordination information for 2,2'-iminodibenzoic acid, see: Field & Venkataraman (2002); Gao et al. (2009); Lin et al. (2006).
Data collection: APEX2 (Bruker, 2003); cell
SAINT (Bruker, 2003); data reduction: SAINT (Bruker, 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: WinGX publication routines (Farrugia, 2012).[Cu(C14H9NO4)(C12H8N2)] | F(000) = 2040 |
Mr = 498.98 | Dx = 1.592 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 6606 reflections |
a = 31.7536 (6) Å | θ = 2.2–20.8° |
b = 9.8492 (2) Å | µ = 1.09 mm−1 |
c = 14.4865 (3) Å | T = 293 K |
β = 113.222 (1)° | Blocks, green |
V = 4163.56 (14) Å3 | 0.1 × 0.08 × 0.07 mm |
Z = 8 |
Bruker APEXII CCD area-detector diffractometer | 3976 independent reflections |
Radiation source: fine-focus sealed tube | 2900 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.061 |
φ and ω scans | θmax = 25.8°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −38→38 |
Tmin = 0.898, Tmax = 0.971 | k = −12→12 |
36778 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.089 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.037P)2 + 5.032P] where P = (Fo2 + 2Fc2)/3 |
3976 reflections | (Δ/σ)max < 0.001 |
307 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.40 e Å−3 |
[Cu(C14H9NO4)(C12H8N2)] | V = 4163.56 (14) Å3 |
Mr = 498.98 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 31.7536 (6) Å | µ = 1.09 mm−1 |
b = 9.8492 (2) Å | T = 293 K |
c = 14.4865 (3) Å | 0.1 × 0.08 × 0.07 mm |
β = 113.222 (1)° |
Bruker APEXII CCD area-detector diffractometer | 3976 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 2900 reflections with I > 2σ(I) |
Tmin = 0.898, Tmax = 0.971 | Rint = 0.061 |
36778 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.089 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.29 e Å−3 |
3976 reflections | Δρmin = −0.40 e Å−3 |
307 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu1 | 0.172485 (11) | 0.45882 (4) | 0.30778 (3) | 0.03710 (12) | |
N1 | 0.07823 (8) | 0.7287 (3) | 0.46195 (18) | 0.0466 (6) | |
H1 | 0.1021 | 0.6781 | 0.4882 | 0.056* | |
N2 | 0.20508 (7) | 0.2788 (2) | 0.35164 (16) | 0.0361 (5) | |
N3 | 0.23714 (7) | 0.5223 (2) | 0.34707 (17) | 0.0370 (5) | |
O4 | 0.11136 (6) | 0.6223 (2) | 0.75794 (15) | 0.0448 (5) | |
O1 | 0.14757 (7) | 0.6413 (2) | 0.27927 (16) | 0.0479 (5) | |
O2 | 0.14659 (7) | 0.6025 (2) | 0.42821 (15) | 0.0495 (5) | |
O3 | 0.13160 (6) | 0.5939 (2) | 0.63028 (15) | 0.0441 (5) | |
C1 | 0.13485 (9) | 0.6710 (3) | 0.3501 (2) | 0.0387 (7) | |
C2 | 0.10555 (8) | 0.7946 (3) | 0.3344 (2) | 0.0361 (7) | |
C3 | 0.10490 (9) | 0.8884 (3) | 0.2622 (2) | 0.0444 (7) | |
H3 | 0.1217 | 0.8703 | 0.2237 | 0.053* | |
C4 | 0.08029 (11) | 1.0071 (3) | 0.2458 (3) | 0.0539 (9) | |
H4 | 0.0798 | 1.0670 | 0.1957 | 0.065* | |
C5 | 0.05662 (10) | 1.0354 (3) | 0.3043 (3) | 0.0560 (9) | |
H5 | 0.0414 | 1.1179 | 0.2967 | 0.067* | |
C6 | 0.05500 (10) | 0.9437 (3) | 0.3744 (3) | 0.0528 (8) | |
H6 | 0.0379 | 0.9641 | 0.4120 | 0.063* | |
C7 | 0.07871 (9) | 0.8197 (3) | 0.3902 (2) | 0.0384 (7) | |
C8 | 0.04358 (9) | 0.7090 (3) | 0.4972 (2) | 0.0414 (7) | |
C9 | −0.00235 (10) | 0.7313 (4) | 0.4351 (3) | 0.0537 (9) | |
H9 | −0.0099 | 0.7659 | 0.3708 | 0.064* | |
C10 | −0.03645 (10) | 0.7024 (4) | 0.4680 (3) | 0.0603 (10) | |
H10 | −0.0669 | 0.7152 | 0.4249 | 0.072* | |
C11 | −0.02635 (10) | 0.6550 (4) | 0.5636 (3) | 0.0605 (10) | |
H11 | −0.0497 | 0.6372 | 0.5855 | 0.073* | |
C12 | 0.01899 (10) | 0.6343 (3) | 0.6269 (3) | 0.0492 (8) | |
H12 | 0.0262 | 0.6032 | 0.6919 | 0.059* | |
C13 | 0.05402 (9) | 0.6595 (3) | 0.5942 (2) | 0.0383 (7) | |
C14 | 0.10206 (9) | 0.6238 (3) | 0.6641 (2) | 0.0381 (7) | |
C15 | 0.18760 (10) | 0.1574 (3) | 0.3531 (2) | 0.0440 (7) | |
H15 | 0.1561 | 0.1494 | 0.3341 | 0.053* | |
C16 | 0.21466 (11) | 0.0407 (3) | 0.3820 (2) | 0.0502 (8) | |
H16 | 0.2012 | −0.0432 | 0.3822 | 0.060* | |
C17 | 0.26097 (11) | 0.0504 (3) | 0.4102 (2) | 0.0500 (8) | |
H17 | 0.2793 | −0.0266 | 0.4299 | 0.060* | |
C18 | 0.28067 (10) | 0.1772 (3) | 0.4090 (2) | 0.0421 (7) | |
C19 | 0.32883 (10) | 0.2002 (4) | 0.4383 (2) | 0.0519 (8) | |
H19 | 0.3491 | 0.1273 | 0.4580 | 0.062* | |
C20 | 0.34496 (10) | 0.3263 (4) | 0.4376 (2) | 0.0515 (8) | |
H20 | 0.3764 | 0.3388 | 0.4582 | 0.062* | |
C21 | 0.31555 (9) | 0.4409 (3) | 0.4063 (2) | 0.0409 (7) | |
C22 | 0.32977 (11) | 0.5755 (4) | 0.4042 (2) | 0.0516 (9) | |
H22 | 0.3607 | 0.5948 | 0.4229 | 0.062* | |
C23 | 0.29850 (11) | 0.6773 (3) | 0.3750 (2) | 0.0523 (8) | |
H23 | 0.3080 | 0.7664 | 0.3737 | 0.063* | |
C24 | 0.25214 (10) | 0.6482 (3) | 0.3469 (2) | 0.0454 (7) | |
H24 | 0.2311 | 0.7190 | 0.3274 | 0.055* | |
C25 | 0.26837 (9) | 0.4207 (3) | 0.3767 (2) | 0.0357 (6) | |
C26 | 0.25100 (9) | 0.2879 (3) | 0.3789 (2) | 0.0351 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.03325 (18) | 0.0380 (2) | 0.0386 (2) | 0.00164 (16) | 0.01251 (14) | −0.00015 (17) |
N1 | 0.0341 (13) | 0.0582 (17) | 0.0465 (16) | 0.0182 (12) | 0.0148 (11) | 0.0099 (13) |
N2 | 0.0334 (12) | 0.0379 (14) | 0.0331 (13) | −0.0015 (10) | 0.0091 (10) | −0.0031 (11) |
N3 | 0.0373 (12) | 0.0364 (14) | 0.0364 (13) | −0.0009 (11) | 0.0137 (10) | −0.0022 (11) |
O4 | 0.0373 (10) | 0.0534 (13) | 0.0395 (12) | 0.0011 (10) | 0.0106 (9) | −0.0050 (10) |
O1 | 0.0541 (12) | 0.0437 (12) | 0.0529 (13) | 0.0095 (10) | 0.0286 (11) | 0.0050 (11) |
O2 | 0.0522 (12) | 0.0514 (13) | 0.0428 (13) | 0.0222 (10) | 0.0166 (10) | 0.0085 (11) |
O3 | 0.0325 (10) | 0.0517 (13) | 0.0484 (13) | 0.0064 (9) | 0.0162 (9) | 0.0097 (10) |
C1 | 0.0311 (14) | 0.0354 (16) | 0.0434 (18) | 0.0016 (12) | 0.0081 (13) | −0.0023 (14) |
C2 | 0.0276 (13) | 0.0328 (16) | 0.0384 (16) | 0.0010 (11) | 0.0029 (12) | −0.0023 (13) |
C3 | 0.0379 (15) | 0.0434 (18) | 0.0443 (18) | −0.0045 (14) | 0.0081 (13) | −0.0003 (15) |
C4 | 0.0439 (17) | 0.0402 (18) | 0.063 (2) | −0.0025 (14) | 0.0055 (16) | 0.0098 (16) |
C5 | 0.0418 (17) | 0.0348 (18) | 0.071 (2) | 0.0068 (15) | −0.0001 (16) | 0.0034 (18) |
C6 | 0.0398 (16) | 0.051 (2) | 0.059 (2) | 0.0143 (15) | 0.0105 (15) | −0.0053 (17) |
C7 | 0.0285 (14) | 0.0407 (17) | 0.0370 (17) | 0.0064 (12) | 0.0033 (12) | 0.0004 (14) |
C8 | 0.0330 (15) | 0.0418 (17) | 0.0445 (18) | 0.0066 (13) | 0.0101 (13) | −0.0051 (14) |
C9 | 0.0355 (16) | 0.067 (2) | 0.052 (2) | 0.0124 (15) | 0.0096 (14) | −0.0008 (17) |
C10 | 0.0299 (16) | 0.072 (3) | 0.069 (3) | 0.0086 (16) | 0.0089 (16) | −0.005 (2) |
C11 | 0.0356 (17) | 0.068 (2) | 0.083 (3) | −0.0017 (16) | 0.0282 (17) | −0.006 (2) |
C12 | 0.0401 (16) | 0.052 (2) | 0.056 (2) | −0.0007 (15) | 0.0197 (15) | −0.0052 (16) |
C13 | 0.0289 (14) | 0.0340 (16) | 0.0484 (18) | 0.0012 (12) | 0.0113 (12) | −0.0069 (14) |
C14 | 0.0334 (15) | 0.0320 (16) | 0.0460 (19) | −0.0047 (12) | 0.0125 (13) | −0.0006 (14) |
C15 | 0.0420 (16) | 0.0425 (19) | 0.0415 (18) | −0.0063 (14) | 0.0100 (13) | −0.0033 (14) |
C16 | 0.064 (2) | 0.0330 (17) | 0.0458 (18) | −0.0072 (16) | 0.0138 (15) | −0.0010 (15) |
C17 | 0.060 (2) | 0.0400 (18) | 0.0423 (18) | 0.0115 (16) | 0.0119 (15) | −0.0002 (15) |
C18 | 0.0449 (16) | 0.0439 (18) | 0.0341 (17) | 0.0076 (14) | 0.0120 (13) | −0.0006 (14) |
C19 | 0.0391 (17) | 0.064 (2) | 0.050 (2) | 0.0151 (16) | 0.0141 (14) | 0.0007 (17) |
C20 | 0.0322 (15) | 0.073 (2) | 0.050 (2) | 0.0047 (16) | 0.0167 (14) | −0.0047 (18) |
C21 | 0.0343 (14) | 0.056 (2) | 0.0358 (16) | −0.0040 (14) | 0.0170 (12) | −0.0041 (15) |
C22 | 0.0399 (17) | 0.070 (2) | 0.048 (2) | −0.0164 (16) | 0.0203 (14) | −0.0093 (17) |
C23 | 0.060 (2) | 0.050 (2) | 0.051 (2) | −0.0174 (17) | 0.0258 (16) | −0.0057 (16) |
C24 | 0.0505 (18) | 0.0392 (18) | 0.0472 (19) | −0.0048 (14) | 0.0200 (15) | −0.0043 (15) |
C25 | 0.0356 (14) | 0.0425 (17) | 0.0295 (15) | −0.0012 (12) | 0.0135 (12) | −0.0031 (12) |
C26 | 0.0361 (14) | 0.0399 (16) | 0.0284 (15) | 0.0021 (12) | 0.0117 (12) | −0.0006 (13) |
Cu1—O1 | 1.942 (2) | C8—C13 | 1.397 (4) |
Cu1—O4i | 1.9548 (19) | C9—C10 | 1.375 (4) |
Cu1—N3 | 2.002 (2) | C9—H9 | 0.9300 |
Cu1—N2 | 2.025 (2) | C10—C11 | 1.374 (5) |
Cu1—O3i | 2.4360 (19) | C10—H10 | 0.9300 |
Cu1—C14i | 2.515 (3) | C11—C12 | 1.383 (4) |
N1—C7 | 1.377 (4) | C11—H11 | 0.9300 |
N1—C8 | 1.398 (4) | C12—C13 | 1.392 (4) |
N1—H1 | 0.8600 | C12—H12 | 0.9300 |
N2—C15 | 1.322 (4) | C13—C14 | 1.503 (4) |
N2—C26 | 1.355 (3) | C14—Cu1ii | 2.515 (3) |
N3—C24 | 1.329 (4) | C15—C16 | 1.397 (4) |
N3—C25 | 1.354 (3) | C15—H15 | 0.9300 |
O4—C14 | 1.272 (3) | C16—C17 | 1.366 (4) |
O4—Cu1ii | 1.9548 (19) | C16—H16 | 0.9300 |
O1—C1 | 1.276 (3) | C17—C18 | 1.399 (4) |
O2—C1 | 1.241 (3) | C17—H17 | 0.9300 |
O3—C14 | 1.253 (3) | C18—C26 | 1.393 (4) |
O3—Cu1ii | 2.4360 (19) | C18—C19 | 1.435 (4) |
C1—C2 | 1.494 (4) | C19—C20 | 1.345 (5) |
C2—C3 | 1.389 (4) | C19—H19 | 0.9300 |
C2—C7 | 1.409 (4) | C20—C21 | 1.421 (4) |
C3—C4 | 1.373 (4) | C20—H20 | 0.9300 |
C3—H3 | 0.9300 | C21—C25 | 1.400 (4) |
C4—C5 | 1.366 (5) | C21—C22 | 1.404 (4) |
C4—H4 | 0.9300 | C22—C23 | 1.357 (4) |
C5—C6 | 1.374 (5) | C22—H22 | 0.9300 |
C5—H5 | 0.9300 | C23—C24 | 1.394 (4) |
C6—C7 | 1.406 (4) | C23—H23 | 0.9300 |
C6—H6 | 0.9300 | C24—H24 | 0.9300 |
C8—C9 | 1.397 (4) | C25—C26 | 1.425 (4) |
O1—Cu1—O4i | 92.16 (9) | C11—C10—C9 | 121.2 (3) |
O1—Cu1—N3 | 93.31 (9) | C11—C10—H10 | 119.4 |
O4i—Cu1—N3 | 171.94 (9) | C9—C10—H10 | 119.4 |
O1—Cu1—N2 | 172.92 (9) | C10—C11—C12 | 119.1 (3) |
O4i—Cu1—N2 | 93.93 (9) | C10—C11—H11 | 120.5 |
N3—Cu1—N2 | 81.03 (9) | C12—C11—H11 | 120.5 |
O1—Cu1—O3i | 88.28 (8) | C11—C12—C13 | 120.7 (3) |
O4i—Cu1—O3i | 58.99 (7) | C11—C12—H12 | 119.6 |
N3—Cu1—O3i | 115.25 (8) | C13—C12—H12 | 119.6 |
N2—Cu1—O3i | 97.95 (8) | C12—C13—C8 | 120.0 (3) |
O1—Cu1—C14i | 88.22 (9) | C12—C13—C14 | 117.6 (3) |
O4i—Cu1—C14i | 29.85 (8) | C8—C13—C14 | 122.3 (2) |
N3—Cu1—C14i | 144.48 (9) | O3—C14—O4 | 121.4 (2) |
N2—Cu1—C14i | 98.86 (9) | O3—C14—C13 | 120.6 (3) |
O3i—Cu1—C14i | 29.27 (8) | O4—C14—C13 | 118.0 (2) |
C7—N1—C8 | 127.7 (2) | O3—C14—Cu1ii | 71.87 (15) |
C7—N1—H1 | 116.1 | O4—C14—Cu1ii | 49.89 (13) |
C8—N1—H1 | 116.1 | C13—C14—Cu1ii | 165.6 (2) |
C15—N2—C26 | 117.7 (2) | N2—C15—C16 | 122.5 (3) |
C15—N2—Cu1 | 129.13 (19) | N2—C15—H15 | 118.8 |
C26—N2—Cu1 | 113.09 (18) | C16—C15—H15 | 118.8 |
C24—N3—C25 | 118.2 (2) | C17—C16—C15 | 119.6 (3) |
C24—N3—Cu1 | 128.2 (2) | C17—C16—H16 | 120.2 |
C25—N3—Cu1 | 113.59 (18) | C15—C16—H16 | 120.2 |
C14—O4—Cu1ii | 100.26 (16) | C16—C17—C18 | 119.5 (3) |
C1—O1—Cu1 | 105.80 (18) | C16—C17—H17 | 120.2 |
C14—O3—Cu1ii | 78.86 (16) | C18—C17—H17 | 120.2 |
O2—C1—O1 | 122.2 (3) | C26—C18—C17 | 116.8 (3) |
O2—C1—C2 | 121.8 (3) | C26—C18—C19 | 118.6 (3) |
O1—C1—C2 | 116.0 (3) | C17—C18—C19 | 124.5 (3) |
C3—C2—C7 | 118.8 (3) | C20—C19—C18 | 120.5 (3) |
C3—C2—C1 | 118.7 (3) | C20—C19—H19 | 119.7 |
C7—C2—C1 | 122.4 (3) | C18—C19—H19 | 119.7 |
C4—C3—C2 | 122.4 (3) | C19—C20—C21 | 122.1 (3) |
C4—C3—H3 | 118.8 | C19—C20—H20 | 118.9 |
C2—C3—H3 | 118.8 | C21—C20—H20 | 118.9 |
C5—C4—C3 | 118.7 (3) | C25—C21—C22 | 116.2 (3) |
C5—C4—H4 | 120.6 | C25—C21—C20 | 118.3 (3) |
C3—C4—H4 | 120.6 | C22—C21—C20 | 125.5 (3) |
C4—C5—C6 | 121.0 (3) | C23—C22—C21 | 120.2 (3) |
C4—C5—H5 | 119.5 | C23—C22—H22 | 119.9 |
C6—C5—H5 | 119.5 | C21—C22—H22 | 119.9 |
C5—C6—C7 | 121.1 (3) | C22—C23—C24 | 119.8 (3) |
C5—C6—H6 | 119.4 | C22—C23—H23 | 120.1 |
C7—C6—H6 | 119.4 | C24—C23—H23 | 120.1 |
N1—C7—C6 | 121.6 (3) | N3—C24—C23 | 122.0 (3) |
N1—C7—C2 | 120.6 (2) | N3—C24—H24 | 119.0 |
C6—C7—C2 | 117.8 (3) | C23—C24—H24 | 119.0 |
C9—C8—C13 | 118.5 (3) | N3—C25—C21 | 123.6 (3) |
C9—C8—N1 | 121.0 (3) | N3—C25—C26 | 116.4 (2) |
C13—C8—N1 | 120.5 (2) | C21—C25—C26 | 120.1 (3) |
C10—C9—C8 | 120.6 (3) | N2—C26—C18 | 123.8 (3) |
C10—C9—H9 | 119.7 | N2—C26—C25 | 115.8 (2) |
C8—C9—H9 | 119.7 | C18—C26—C25 | 120.3 (2) |
O1—Cu1—N2—C15 | 142.7 (7) | C11—C12—C13—C14 | −175.1 (3) |
O4i—Cu1—N2—C15 | −6.5 (3) | C9—C8—C13—C12 | −0.3 (4) |
N3—Cu1—N2—C15 | 179.8 (3) | N1—C8—C13—C12 | −177.0 (3) |
O3i—Cu1—N2—C15 | −65.8 (3) | C9—C8—C13—C14 | 175.9 (3) |
C14i—Cu1—N2—C15 | −36.2 (3) | N1—C8—C13—C14 | −0.8 (4) |
O1—Cu1—N2—C26 | −40.2 (8) | Cu1ii—O3—C14—O4 | 6.4 (2) |
O4i—Cu1—N2—C26 | 170.57 (18) | Cu1ii—O3—C14—C13 | −172.1 (3) |
N3—Cu1—N2—C26 | −3.10 (18) | Cu1ii—O4—C14—O3 | −7.9 (3) |
O3i—Cu1—N2—C26 | 111.35 (18) | Cu1ii—O4—C14—C13 | 170.6 (2) |
C14i—Cu1—N2—C26 | 140.93 (18) | C12—C13—C14—O3 | 152.6 (3) |
O1—Cu1—N3—C24 | −1.7 (3) | C8—C13—C14—O3 | −23.8 (4) |
O4i—Cu1—N3—C24 | 130.9 (6) | C12—C13—C14—O4 | −26.0 (4) |
N2—Cu1—N3—C24 | −177.4 (3) | C8—C13—C14—O4 | 157.7 (3) |
O3i—Cu1—N3—C24 | 88.0 (3) | C12—C13—C14—Cu1ii | 4.3 (10) |
C14i—Cu1—N3—C24 | 89.9 (3) | C8—C13—C14—Cu1ii | −172.1 (7) |
O1—Cu1—N3—C25 | 178.62 (19) | C26—N2—C15—C16 | 0.4 (4) |
O4i—Cu1—N3—C25 | −48.8 (7) | Cu1—N2—C15—C16 | 177.4 (2) |
N2—Cu1—N3—C25 | 2.88 (18) | N2—C15—C16—C17 | 0.0 (5) |
O3i—Cu1—N3—C25 | −91.73 (19) | C15—C16—C17—C18 | −0.4 (5) |
C14i—Cu1—N3—C25 | −89.8 (2) | C16—C17—C18—C26 | 0.3 (4) |
O4i—Cu1—O1—C1 | 77.83 (18) | C16—C17—C18—C19 | 179.0 (3) |
N3—Cu1—O1—C1 | −108.10 (18) | C26—C18—C19—C20 | 0.6 (5) |
N2—Cu1—O1—C1 | −71.5 (8) | C17—C18—C19—C20 | −178.1 (3) |
O3i—Cu1—O1—C1 | 136.70 (18) | C18—C19—C20—C21 | −1.3 (5) |
C14i—Cu1—O1—C1 | 107.42 (18) | C19—C20—C21—C25 | 0.8 (5) |
Cu1—O1—C1—O2 | 13.4 (3) | C19—C20—C21—C22 | 179.5 (3) |
Cu1—O1—C1—C2 | −167.57 (18) | C25—C21—C22—C23 | 0.2 (4) |
O2—C1—C2—C3 | 160.8 (3) | C20—C21—C22—C23 | −178.4 (3) |
O1—C1—C2—C3 | −18.2 (4) | C21—C22—C23—C24 | −0.1 (5) |
O2—C1—C2—C7 | −19.0 (4) | C25—N3—C24—C23 | 0.7 (4) |
O1—C1—C2—C7 | 162.0 (3) | Cu1—N3—C24—C23 | −179.0 (2) |
C7—C2—C3—C4 | 2.3 (4) | C22—C23—C24—N3 | −0.4 (5) |
C1—C2—C3—C4 | −177.5 (3) | C24—N3—C25—C21 | −0.5 (4) |
C2—C3—C4—C5 | 1.8 (4) | Cu1—N3—C25—C21 | 179.2 (2) |
C3—C4—C5—C6 | −3.9 (5) | C24—N3—C25—C26 | 178.0 (3) |
C4—C5—C6—C7 | 1.9 (5) | Cu1—N3—C25—C26 | −2.2 (3) |
C8—N1—C7—C6 | 29.3 (5) | C22—C21—C25—N3 | 0.1 (4) |
C8—N1—C7—C2 | −154.7 (3) | C20—C21—C25—N3 | 178.8 (3) |
C5—C6—C7—N1 | 178.4 (3) | C22—C21—C25—C26 | −178.4 (3) |
C5—C6—C7—C2 | 2.3 (4) | C20—C21—C25—C26 | 0.3 (4) |
C3—C2—C7—N1 | 179.6 (2) | C15—N2—C26—C18 | −0.5 (4) |
C1—C2—C7—N1 | −0.6 (4) | Cu1—N2—C26—C18 | −178.0 (2) |
C3—C2—C7—C6 | −4.2 (4) | C15—N2—C26—C25 | −179.7 (3) |
C1—C2—C7—C6 | 175.5 (2) | Cu1—N2—C26—C25 | 2.8 (3) |
C7—N1—C8—C9 | 30.5 (5) | C17—C18—C26—N2 | 0.2 (4) |
C7—N1—C8—C13 | −152.8 (3) | C19—C18—C26—N2 | −178.6 (3) |
C13—C8—C9—C10 | −1.3 (5) | C17—C18—C26—C25 | 179.3 (3) |
N1—C8—C9—C10 | 175.4 (3) | C19—C18—C26—C25 | 0.6 (4) |
C8—C9—C10—C11 | 2.0 (5) | N3—C25—C26—N2 | −0.4 (4) |
C9—C10—C11—C12 | −1.0 (5) | C21—C25—C26—N2 | 178.2 (2) |
C10—C11—C12—C13 | −0.7 (5) | N3—C25—C26—C18 | −179.6 (2) |
C11—C12—C13—C8 | 1.3 (5) | C21—C25—C26—C18 | −1.0 (4) |
Symmetry codes: (i) x, −y+1, z−1/2; (ii) x, −y+1, z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2 | 0.86 | 2.07 | 2.708 (5) | 131 |
N1—H1···O3 | 0.86 | 2.06 | 2.701 (5) | 130 |
C17—H17···O2iii | 0.93 | 2.55 | 3.308 (4) | 139 |
C23—H23···O3iv | 0.93 | 2.38 | 3.185 (4) | 145 |
Symmetry codes: (iii) −x+1/2, −y+1/2, −z+1; (iv) −x+1/2, −y+3/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C14H9NO4)(C12H8N2)] |
Mr | 498.98 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 31.7536 (6), 9.8492 (2), 14.4865 (3) |
β (°) | 113.222 (1) |
V (Å3) | 4163.56 (14) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 1.09 |
Crystal size (mm) | 0.1 × 0.08 × 0.07 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.898, 0.971 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 36778, 3976, 2900 |
Rint | 0.061 |
(sin θ/λ)max (Å−1) | 0.611 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.089, 1.02 |
No. of reflections | 3976 |
No. of parameters | 307 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.40 |
Computer programs: APEX2 (Bruker, 2003), SAINT (Bruker, 2003), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2006), WinGX publication routines (Farrugia, 2012).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2 | 0.86 | 2.07 | 2.708 (5) | 131 |
N1—H1···O3 | 0.86 | 2.06 | 2.701 (5) | 130 |
C17—H17···O2i | 0.93 | 2.55 | 3.308 (4) | 139 |
C23—H23···O3ii | 0.93 | 2.38 | 3.185 (4) | 145 |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (ii) −x+1/2, −y+3/2, −z+1. |
Acknowledgements
This work was supported by the Fundo Europeu de Desenvolvimento Regional-QREN-Compete through projects PTDC/FIS/102284/2008 and PEst-C/FIS/UI0036/2011 – Fundação para a Ciência e Tecnologia (FCT).
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
This work is part of a project of synthesizing low dimensional polynuclear magnetic materials with Copper(II) and oxygen-donors bridging ligands (Fabelo et al., 2009; Martins et al., 2008a; Martins et al., 2008b; Silva et al., 2001; Yuste et al., 2007, 2008).
The target of this work is the use of an aromatic dicarboxylic acid, such as the 2,2'-iminodibenzoic acid, (H2IDC) and another quelate, known as ''coligand'' that will block some coordination positions of the Copper(II) metal ion, modulating the dimensionality of the resulting compound. (Gao et al., 2009; Lin et al., 2006; Yuste et al., 2008).
The structure of this compound consists of neutral chains of formula [Cu(C14H9NO4)(C12H8N2)]n, growing along the c-axis, in a zigzag mode, where the 2,2'-iminodibenzoate (IDC2-) units act as linkers between two Cu(II) ions, in a bis-bidentate mode, and the phenanthroline molecules are placed out-of-chain. The whole compound adopts a three dimensional supramolecular structure by weak π-π stacking. The shortest intra- and interchain copper···copper distances are 7.2885 (9) Å [Cu1···Cu1i; (i) = x, 1 - y, -1/2 + z] and 7.1103 (6) Å [Cu1···Cu1v; (v) = 1/2 - x, 1/2 - y, 1 - z], respectively.
The Copper(II) ion shows a distorted octahedral environment, CuN2O4, due to the Jahn-Teller effect. The equatorial positions are occupied by the two nitrogen atoms from the phenanthroline ligand, [N1 and N2], and two oxygen atoms [O1 and O4], from two different carboxylate units of the IDC2- ligand, varying the distances in a very narrow range of [1.940–2.026 Å]. Another two oxygen atoms [O2 and O3], with bond length values 2.618 (2) and 2.438 (3) Å respectively, are placed in the axial positions. The 2,2'-iminodibenzoate links two neighboring Copper(II) metal ions, being the bite angle 55.19 (11)° [O1—Cu1—O2] and 58.92 (11)° [O3—Cu1ii—O4]. [(ii) = x, -y, -1/2 + z]. The ligand is not planar, with a maximum deviation of 1.472 (5) Å for C10 from the mean plane, being the dihedral angle between the two aromatic rings 52.25 (3)°, which is greater than those already reported (Field et al., 2002; Gao et al., 2009).
Intramolecular hydrogen bond interactions exist inside the 2,2'-iminodibenzoate unit between the nitrogen atom [N1] from the amino group and two oxygen atoms [O2 and O3] from the carboxylate groups. The intermolecular π-π stacking interaction exists in between two aromatic rings of two neighbor phenantrolines and also between the aromatic rings of two neighbor 2,2'-iminodibenzoate moieties. These weak π-π interactions, stabilize the crystal structure of the complex. The shortest distances 'centroid-to-centroid' between neighbor aromatic ring of two phenantrolines and two neighbor 2,2'-iminodibenzoate are 3.684 (1) and 3.640 Å respectively.