organic compounds
Bis(4-nitrophenyl) selenide
aChemical Synthesis and Pollution Control Key Laboratory of Sichuan Province, China West Normal University, Nanchong 637002, People's Republic of China
*Correspondence e-mail: zuozongle1@163.com
In the title compound, C12H8N2O4Se, the Se atom is situated on a twofold rotational axis, so the contains one half-molecule. In the molecule, the C—Se—C angle is 99.48 (13)°, the two benzene rings are inclined to each other at an angle of 63.8 (1)° and the nitro group is twisted by 15.9 (1)° from the attached benzene ring. In the crystal, molecules are held together through weak C—H⋯O interactions, forming a three-dimensional network.
Related literature
For applications of organoselenium compounds, see: Mugesh et al. (2001); Nogueira et al. (2004); Wirth (1999). For details of the synthesis, see: Taniguchi (2005). The crystal structures of the related compounds bis(p-tolyl) selenide and bis(4-acetylphenyl) selenide were reported by Blackmore & Abrahams (1955) and Bouraoui et al. (2011), respectively.
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2008); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536813007526/cv5389sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536813007526/cv5389Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536813007526/cv5389Isup3.cml
The title compound has been synthesized following the procedure proposed by Taniguchi (2005). 1-Iodo-4-nitrobenzene (1.0 mmol), selenium (1.2 mmol), cuprous oxide (0.1 mmol), aluminium (2 mmol), magnesium chloride (0.5 mmol), acetylacetone (0.3 mmol), TBAF (0.2 mmol) and DMF/water (3:1, 1.0 ml) were put into a Teflon septum screw-capped tube and then sealed in the air. The reaction mixture was stirred at 120 °C for 36 h, then cooled to room temperature. Subsequently, the resulting mixture was diluted with ethyl acetate and water, and the combined organic extracts were dried with sodium sulfate anhydrous. After the solvent being removed under reduced pressure, the residue was purified by silica-gel
to afford the corresponding product. Yellow single crystals suitable for X-ray diffraction were obtained by recrystallization from acetone.H atoms were placed in calculated positions, with C—H = 0.95 Å, and refined using a riding model, with Uiso(H) = 1.2Ueq(C).
During the past decade, organoselenium compounds have emerged their potential as drug candidates (Nogueira et al., 2004; Mugesh et al., 2001). Organoselenium compounds also exert catalytic role in organic synthesis (Wirth, 1999). Herewith we report the
of the title compound, (I).In (I) (Fig. 1), each Se atom is situated on a twofold rotational axis, so asymmetric part contains a half of the molecule. The C—Se—C angle is 99.48 (13)°, that is similar to 99.58 (13)° observed in bis(4-acetylphenyl) selenide (Bouraoui et al., 2011), but different from 106.2 (1)° found in bis(p-tolyl) selenide (Blackmore & Abrahams, 1955). Two benzene rings in (I) are inclined to each other at 63.8 (1)° and each nitro group is twisted at 15.9 (1)° from the attached benzene ring. The crystal packing is stabilized by the weak C—H···O hydrogen bonds (Table 1).
For applications of organoselenium compounds, see: Mugesh et al. (2001); Nogueira et al. (2004); Wirth (1999). For details of the synthesis, see: Taniguchi (2005). The crystal structures of the related compounds bis(p-tolyl) selenide and bis(4-acetylphenyl) selenide were reported by Blackmore & Abrahams (1955) and Bouraoui et al. (2011), respectively.
Data collection: CrystalClear (Rigaku, 2008); cell
CrystalClear (Rigaku, 2008); data reduction: CrystalClear (Rigaku, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I) showing 50% probability displacement ellipsoids and the atomic numbering [symmetry code: (A) -x, y, 3/2-z]. |
C12H8N2O4Se | F(000) = 640 |
Mr = 323.16 | Dx = 1.837 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 1957 reflections |
a = 7.207 (4) Å | θ = 2.9–29.1° |
b = 14.176 (7) Å | µ = 3.23 mm−1 |
c = 11.686 (5) Å | T = 153 K |
β = 101.870 (7)° | Block, yellow |
V = 1168.3 (9) Å3 | 0.47 × 0.34 × 0.34 mm |
Z = 4 |
Rigaku AFC10/Saturn724+ diffractometer | 1557 independent reflections |
Radiation source: fine-focus sealed tube | 1298 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
Detector resolution: 28.5714 pixels mm-1 | θmax = 29.1°, θmin = 3.2° |
phi and ω scans | h = −9→9 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008) | k = −19→16 |
Tmin = 0.314, Tmax = 0.402 | l = −15→11 |
4848 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.074 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0351P)2 + 0.160P] where P = (Fo2 + 2Fc2)/3 |
1557 reflections | (Δ/σ)max < 0.001 |
87 parameters | Δρmax = 0.70 e Å−3 |
0 restraints | Δρmin = −0.50 e Å−3 |
C12H8N2O4Se | V = 1168.3 (9) Å3 |
Mr = 323.16 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 7.207 (4) Å | µ = 3.23 mm−1 |
b = 14.176 (7) Å | T = 153 K |
c = 11.686 (5) Å | 0.47 × 0.34 × 0.34 mm |
β = 101.870 (7)° |
Rigaku AFC10/Saturn724+ diffractometer | 1557 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008) | 1298 reflections with I > 2σ(I) |
Tmin = 0.314, Tmax = 0.402 | Rint = 0.036 |
4848 measured reflections |
R[F2 > 2σ(F2)] = 0.030 | 0 restraints |
wR(F2) = 0.074 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.70 e Å−3 |
1557 reflections | Δρmin = −0.50 e Å−3 |
87 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Se | 0.0000 | 0.05282 (2) | 0.7500 | 0.02293 (12) | |
O1 | −0.6302 (3) | −0.18522 (11) | 0.34112 (15) | 0.0281 (4) | |
O2 | −0.5748 (2) | −0.29360 (11) | 0.47417 (15) | 0.0251 (4) | |
N1 | −0.5486 (3) | −0.21464 (13) | 0.43644 (16) | 0.0182 (4) | |
C1 | −0.1638 (3) | −0.03449 (14) | 0.65264 (19) | 0.0162 (4) | |
C2 | −0.2197 (3) | −0.01493 (15) | 0.53474 (19) | 0.0166 (4) | |
H2 | −0.1711 | 0.0392 | 0.5030 | 0.020* | |
C3 | −0.3464 (3) | −0.07375 (15) | 0.4622 (2) | 0.0176 (5) | |
H3 | −0.3873 | −0.0601 | 0.3813 | 0.021* | |
C4 | −0.4114 (3) | −0.15292 (14) | 0.51142 (19) | 0.0157 (4) | |
C5 | −0.3547 (3) | −0.17464 (16) | 0.6281 (2) | 0.0195 (5) | |
H5 | −0.3994 | −0.2303 | 0.6588 | 0.023* | |
C6 | −0.2320 (3) | −0.11472 (15) | 0.70005 (19) | 0.0198 (5) | |
H6 | −0.1942 | −0.1279 | 0.7812 | 0.024* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Se | 0.02479 (19) | 0.01636 (18) | 0.0236 (2) | 0.000 | −0.00441 (13) | 0.000 |
O1 | 0.0308 (10) | 0.0249 (9) | 0.0228 (9) | 0.0009 (7) | −0.0082 (7) | −0.0017 (7) |
O2 | 0.0284 (10) | 0.0164 (8) | 0.0296 (10) | −0.0054 (7) | 0.0037 (8) | −0.0012 (7) |
N1 | 0.0158 (10) | 0.0187 (10) | 0.0197 (10) | 0.0021 (7) | 0.0024 (8) | −0.0048 (7) |
C1 | 0.0145 (10) | 0.0153 (11) | 0.0180 (11) | 0.0013 (8) | 0.0016 (8) | −0.0020 (8) |
C2 | 0.0163 (10) | 0.0147 (10) | 0.0191 (12) | 0.0014 (8) | 0.0039 (9) | 0.0038 (8) |
C3 | 0.0174 (11) | 0.0205 (12) | 0.0142 (11) | 0.0038 (8) | 0.0016 (8) | 0.0019 (8) |
C4 | 0.0130 (10) | 0.0154 (11) | 0.0182 (11) | 0.0023 (8) | 0.0016 (8) | −0.0045 (8) |
C5 | 0.0223 (12) | 0.0160 (11) | 0.0199 (12) | −0.0010 (9) | 0.0038 (9) | 0.0031 (8) |
C6 | 0.0245 (12) | 0.0205 (12) | 0.0134 (11) | −0.0014 (9) | 0.0018 (9) | 0.0026 (8) |
Se—C1 | 1.915 (2) | C2—H2 | 0.9500 |
Se—C1i | 1.915 (2) | C3—C4 | 1.386 (3) |
O1—N1 | 1.221 (2) | C3—H3 | 0.9500 |
O2—N1 | 1.232 (2) | C4—C5 | 1.375 (3) |
N1—C4 | 1.468 (3) | C5—C6 | 1.380 (3) |
C1—C2 | 1.382 (3) | C5—H5 | 0.9500 |
C1—C6 | 1.398 (3) | C6—H6 | 0.9500 |
C2—C3 | 1.389 (3) | ||
C1—Se—C1i | 99.48 (13) | C4—C3—H3 | 121.0 |
O1—N1—O2 | 123.79 (19) | C2—C3—H3 | 121.0 |
O1—N1—C4 | 118.68 (18) | C5—C4—C3 | 122.4 (2) |
O2—N1—C4 | 117.53 (18) | C5—C4—N1 | 118.99 (19) |
C2—C1—C6 | 120.3 (2) | C3—C4—N1 | 118.59 (19) |
C2—C1—Se | 118.71 (16) | C4—C5—C6 | 119.3 (2) |
C6—C1—Se | 120.96 (17) | C4—C5—H5 | 120.4 |
C1—C2—C3 | 120.6 (2) | C6—C5—H5 | 120.4 |
C1—C2—H2 | 119.7 | C5—C6—C1 | 119.5 (2) |
C3—C2—H2 | 119.7 | C5—C6—H6 | 120.2 |
C4—C3—C2 | 117.9 (2) | C1—C6—H6 | 120.2 |
C1i—Se—C1—C2 | −139.8 (2) | O2—N1—C4—C5 | −15.9 (3) |
C1i—Se—C1—C6 | 42.66 (16) | O1—N1—C4—C3 | −14.9 (3) |
C6—C1—C2—C3 | 1.0 (3) | O2—N1—C4—C3 | 165.32 (19) |
Se—C1—C2—C3 | −176.55 (16) | C3—C4—C5—C6 | 1.5 (3) |
C1—C2—C3—C4 | −1.2 (3) | N1—C4—C5—C6 | −177.24 (19) |
C2—C3—C4—C5 | −0.1 (3) | C4—C5—C6—C1 | −1.7 (3) |
C2—C3—C4—N1 | 178.67 (18) | C2—C1—C6—C5 | 0.4 (3) |
O1—N1—C4—C5 | 163.9 (2) | Se—C1—C6—C5 | 177.94 (17) |
Symmetry code: (i) −x, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···O2ii | 0.95 | 2.51 | 3.426 (3) | 162 |
C6—H6···O2iii | 0.95 | 2.50 | 3.427 (3) | 164 |
Symmetry codes: (ii) x+1/2, y+1/2, z; (iii) x+1/2, −y−1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C12H8N2O4Se |
Mr | 323.16 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 153 |
a, b, c (Å) | 7.207 (4), 14.176 (7), 11.686 (5) |
β (°) | 101.870 (7) |
V (Å3) | 1168.3 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 3.23 |
Crystal size (mm) | 0.47 × 0.34 × 0.34 |
Data collection | |
Diffractometer | Rigaku AFC10/Saturn724+ |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2008) |
Tmin, Tmax | 0.314, 0.402 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4848, 1557, 1298 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.684 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.030, 0.074, 1.00 |
No. of reflections | 1557 |
No. of parameters | 87 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.70, −0.50 |
Computer programs: CrystalClear (Rigaku, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···O2i | 0.95 | 2.51 | 3.426 (3) | 161.6 |
C6—H6···O2ii | 0.95 | 2.50 | 3.427 (3) | 164.1 |
Symmetry codes: (i) x+1/2, y+1/2, z; (ii) x+1/2, −y−1/2, z+1/2. |
References
Blackmore, W. R. & Abrahams, S. C. (1955). Acta Cryst. 8, 323–328. CSD CrossRef CAS IUCr Journals Web of Science Google Scholar
Bouraoui, H., Boudjada, A., Bouacida, S., Mechehoud, Y. & Meinnel, J. (2011). Acta Cryst. E67, o941. Web of Science CSD CrossRef IUCr Journals Google Scholar
Mugesh, G., du Mont, W. W. & Sies, H. (2001). Chem. Rev. 101, 2125–2179. Web of Science CrossRef PubMed CAS Google Scholar
Nogueira, C. W., Zeni, G. & Rocha, J. B. (2004). Chem. Rev. 104, 6255–6285. Web of Science CrossRef PubMed CAS Google Scholar
Rigaku (2008). CrystalClear. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Taniguchi, N. (2005). Synlett, pp. 1687–1690. Web of Science CrossRef Google Scholar
Wirth, T. (1999). Tetrahedron, 55, 1–28. Web of Science CrossRef CAS Google Scholar
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During the past decade, organoselenium compounds have emerged their potential as drug candidates (Nogueira et al., 2004; Mugesh et al., 2001). Organoselenium compounds also exert catalytic role in organic synthesis (Wirth, 1999). Herewith we report the crystal structure of the title compound, (I).
In (I) (Fig. 1), each Se atom is situated on a twofold rotational axis, so asymmetric part contains a half of the molecule. The C—Se—C angle is 99.48 (13)°, that is similar to 99.58 (13)° observed in bis(4-acetylphenyl) selenide (Bouraoui et al., 2011), but different from 106.2 (1)° found in bis(p-tolyl) selenide (Blackmore & Abrahams, 1955). Two benzene rings in (I) are inclined to each other at 63.8 (1)° and each nitro group is twisted at 15.9 (1)° from the attached benzene ring. The crystal packing is stabilized by the weak C—H···O hydrogen bonds (Table 1).