organic compounds
4-Amino-3-(3-methoxybenzyl)-1H-1,2,4-triazole-5(4H)-thione
aDepartment of Chemistry, P A College of Engineering, Nadupadavu 574 153, D.K. Mangalore, India, bFaculty of Industrial Science and Technology, University Malaysia Pahang, LebuhrayaTunRazak, 26300 Gambang, Kuantan, Pahang Darul Makmur, Malaysia, and cX-ray Crystallography Laboratory, Post-Graduate Department of Physics & Electronics, University of Jammu, Jammu Tawi 180 006, India
*Correspondence e-mail: rkvk.paper11@gmail.com
In the title molecule, C10H12N4SO, the triazole ring forms a dihedral angle of 73.0 (5)° with the benzene ring. The methoxy group is approximtely coplanar with the benzene ring with a C C—O—Cmethyl torsion angle of 4.7 (3)°. In the crystal, N—H⋯S hydrogen bonds connect pairs of inversion-related molecules, which are in turn connected by N—H⋯N hydrogen bonds into chains of rings along [010]. Weak C—H⋯O hydrogen bonds connect these chains into a two-dimensional network parallel to (-102).
Related literature
For background to the chemistry of triazoles, see: Holla et al. (2001, 2006). For the biological activity of 1,2,4-triazole derivatives, see: Cansiz et al. (2001); Jones et al. (1965); Kane et al. (1988); Mullican et al. (1993). For related structures, see: Chen et al. (2007); Gao et al. (2011); Karczmarzyk et al. (2012). For standard bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
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Data collection: CrysAlis PRO (Oxford Diffraction, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON.
Supporting information
https://doi.org/10.1107/S1600536813009859/lh5605sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536813009859/lh5605Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536813009859/lh5605Isup3.cml
A well triturated mixture of 3-methoxyphenylacetic acid (0.83 g.0.05 mol) and thiocarbohydrazide (0.53 g. 0.05 mol) was fused in a round bottom flask for one hour on a oil bath at 413 K. It was cooled to room temperature and washed with sodium bicarbonate (5%) solution to remove unreacted acid and again washed with water. The dried compound was recrystallized from methanol to yield single crystals (mp. 417–419 K).
Atoms H61 and H62 attached to N6 were located in a difference map and refined isotropically. The remaining H atoms were positioned geometrically and were treated as riding on their parent C/N atoms, with C—H distances of 0.93–0.96 Å and N—H distance of 0.86 Å with Uiso(H) = 1.2Ueq(C/N) or Uiso(H) = 1.5Ueq(Cmethyl).
The chemistry of triazoles has received considerable attention in recent years because of their versatility in the synthesis of many other 102) (Fig. 2).
1,2,4-Triazole derivatives are well known for their different biological activities, therefore various 1,2,4-triazole derivatives and their N-bridged heterocyclic analogs have been extensively studied (Holla et al., 2001; 2006). The derivatives of 1,2,4-triazole are known to exhibit anti-inflammatory (Mullican et al., 1993), antiviral (Jones et al., 1965), antimicrobial (Cansiz et al., 2001), and antidepressant activity (Kane et al., 1988). Hence, synthesis of the corresponding could be of interest from the viewpoint of chemical reactivity and biological activity. In the title compound (Fig. 1), the bond lengths and angles have normal values (Allen et al., 1987) and are comparable with closely related structures (Chen et al., 2007; Karczmarzyk et al., 2012; Gao et al., 2011). The angles around atom C3 in the triazole ring deviate from the normal angles based on Csp2 giving bond angles of 102.72 (14)° and 130.12 (13)° for N2—C3—N4 and N2—C3—S1, respectively. The dihedral angle between the triazole ring (N1/N2/C3/N4/C5) and the benzene ring (C8—C13) is 73.0 (5)°. In the crystal, N—H···S hydrogen bonds connect pairs of inversion related molecules, which are in turn connected by N—H···N hydrogen bonds into chains of rings along [010]. In addition, weak C—H···O hydrogen bonds connect these chains into a two-dimensional network parallel to (For background to the chemistry of triazoles, see: Holla et al. (2001, 2006). For the biological activity of 1,2,4-triazole derivatives, see: Cansiz et al. (2001); Jones et al. (1965); Kane et al. (1988); Mullican et al. (1993). For related structures, see: Chen et al. (2007); Gao et al. (2011); Karczmarzyk et al. (2012). For standard bond-length data, see: Allen et al. (1987).
Data collection: CrysAlis PRO (Oxford Diffraction, 2010); cell
CrysAlis PRO (Oxford Diffraction, 2010); data reduction: CrysAlis PRO (Oxford Diffraction, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound with ellipsoids drawn at the 40% probability level. H atoms are shown as small spheres of arbitrary radii. | |
Fig. 2. Part of the crystal structure with hydrogen bonds shown as dashed lines. |
C10H12N4OS | F(000) = 496 |
Mr = 236.30 | Dx = 1.440 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 7374 reflections |
a = 7.4580 (3) Å | θ = 3.5–29.0° |
b = 5.8006 (2) Å | µ = 0.28 mm−1 |
c = 25.2817 (10) Å | T = 293 K |
β = 94.513 (4)° | Plate, white |
V = 1090.32 (7) Å3 | 0.3 × 0.2 × 0.1 mm |
Z = 4 |
Oxford Diffraction Xcalibur Sapphire3 diffractometer | 2130 independent reflections |
Radiation source: fine-focus sealed tube | 1748 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.042 |
Detector resolution: 16.1049 pixels mm-1 | θmax = 26.0°, θmin = 3.5° |
ω scans | h = −9→9 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010) | k = −7→7 |
Tmin = 0.946, Tmax = 1.000 | l = −31→31 |
15190 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0408P)2 + 0.3289P] where P = (Fo2 + 2Fc2)/3 |
2130 reflections | (Δ/σ)max = 0.002 |
154 parameters | Δρmax = 0.19 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C10H12N4OS | V = 1090.32 (7) Å3 |
Mr = 236.30 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.4580 (3) Å | µ = 0.28 mm−1 |
b = 5.8006 (2) Å | T = 293 K |
c = 25.2817 (10) Å | 0.3 × 0.2 × 0.1 mm |
β = 94.513 (4)° |
Oxford Diffraction Xcalibur Sapphire3 diffractometer | 2130 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010) | 1748 reflections with I > 2σ(I) |
Tmin = 0.946, Tmax = 1.000 | Rint = 0.042 |
15190 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.19 e Å−3 |
2130 reflections | Δρmin = −0.24 e Å−3 |
154 parameters |
Experimental. CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.34.40 (release 27–08-2010 CrysAlis171. NET) (compiled Aug 27 2010,11:50:40) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.79363 (6) | 1.26508 (8) | 1.014843 (19) | 0.03712 (16) | |
O1 | 0.4364 (2) | 0.7659 (2) | 0.66746 (5) | 0.0467 (4) | |
N1 | 0.6715 (2) | 0.7764 (2) | 0.91172 (6) | 0.0323 (4) | |
N2 | 0.77124 (19) | 0.8746 (2) | 0.95420 (6) | 0.0319 (4) | |
H2 | 0.8621 | 0.8077 | 0.9707 | 0.038* | |
C3 | 0.7134 (2) | 1.0833 (3) | 0.96726 (6) | 0.0254 (4) | |
N4 | 0.56824 (17) | 1.1164 (2) | 0.93177 (5) | 0.0239 (3) | |
C5 | 0.5471 (2) | 0.9287 (3) | 0.89877 (6) | 0.0246 (4) | |
N6 | 0.4558 (2) | 1.3106 (3) | 0.92853 (8) | 0.0360 (4) | |
C7 | 0.4041 (2) | 0.9044 (3) | 0.85492 (6) | 0.0284 (4) | |
H7A | 0.2994 | 0.9908 | 0.8639 | 0.034* | |
H7B | 0.3696 | 0.7434 | 0.8519 | 0.034* | |
C8 | 0.4584 (2) | 0.9870 (3) | 0.80138 (6) | 0.0249 (4) | |
C9 | 0.5382 (2) | 1.2018 (3) | 0.79529 (7) | 0.0322 (4) | |
H9 | 0.5617 | 1.2972 | 0.8246 | 0.039* | |
C10 | 0.5823 (2) | 1.2730 (3) | 0.74597 (8) | 0.0339 (4) | |
H10 | 0.6347 | 1.4170 | 0.7423 | 0.041* | |
C11 | 0.5501 (2) | 1.1344 (3) | 0.70177 (7) | 0.0328 (4) | |
H11 | 0.5805 | 1.1838 | 0.6686 | 0.039* | |
C12 | 0.4717 (2) | 0.9206 (3) | 0.70779 (7) | 0.0290 (4) | |
C13 | 0.4246 (2) | 0.8490 (3) | 0.75726 (7) | 0.0271 (4) | |
H13 | 0.3696 | 0.7064 | 0.7607 | 0.032* | |
C14 | 0.4954 (3) | 0.8208 (4) | 0.61719 (8) | 0.0492 (5) | |
H14A | 0.4348 | 0.9572 | 0.6037 | 0.074* | |
H14B | 0.4686 | 0.6950 | 0.5932 | 0.074* | |
H14C | 0.6228 | 0.8475 | 0.6205 | 0.074* | |
H62 | 0.524 (3) | 1.436 (4) | 0.9246 (8) | 0.049 (6)* | |
H61 | 0.403 (3) | 1.324 (4) | 0.9573 (10) | 0.065 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0330 (3) | 0.0444 (3) | 0.0325 (3) | 0.0079 (2) | −0.00694 (19) | −0.0124 (2) |
O1 | 0.0607 (9) | 0.0517 (8) | 0.0284 (7) | −0.0206 (7) | 0.0078 (6) | −0.0085 (6) |
N1 | 0.0352 (8) | 0.0312 (8) | 0.0297 (9) | 0.0065 (6) | −0.0034 (7) | −0.0030 (6) |
N2 | 0.0317 (8) | 0.0324 (8) | 0.0303 (8) | 0.0109 (6) | −0.0064 (7) | −0.0018 (6) |
C3 | 0.0232 (8) | 0.0305 (9) | 0.0227 (9) | 0.0032 (7) | 0.0025 (7) | 0.0025 (7) |
N4 | 0.0223 (7) | 0.0239 (7) | 0.0250 (7) | 0.0044 (5) | −0.0015 (6) | −0.0009 (6) |
C5 | 0.0267 (8) | 0.0244 (8) | 0.0228 (9) | −0.0007 (7) | 0.0033 (7) | 0.0004 (6) |
N6 | 0.0353 (9) | 0.0290 (9) | 0.0422 (11) | 0.0141 (7) | −0.0073 (8) | −0.0061 (7) |
C7 | 0.0264 (9) | 0.0310 (9) | 0.0273 (9) | −0.0015 (7) | −0.0010 (7) | −0.0032 (7) |
C8 | 0.0204 (8) | 0.0265 (8) | 0.0272 (9) | 0.0033 (6) | −0.0028 (7) | 0.0003 (7) |
C9 | 0.0355 (10) | 0.0263 (9) | 0.0341 (10) | −0.0017 (7) | −0.0023 (8) | −0.0043 (7) |
C10 | 0.0326 (10) | 0.0238 (9) | 0.0450 (11) | −0.0031 (7) | 0.0003 (8) | 0.0055 (8) |
C11 | 0.0311 (9) | 0.0363 (10) | 0.0310 (10) | −0.0006 (8) | 0.0016 (8) | 0.0079 (8) |
C12 | 0.0261 (9) | 0.0335 (9) | 0.0267 (9) | −0.0010 (7) | −0.0012 (7) | −0.0008 (7) |
C13 | 0.0256 (9) | 0.0248 (8) | 0.0304 (10) | −0.0024 (7) | −0.0004 (7) | 0.0008 (7) |
C14 | 0.0469 (13) | 0.0726 (15) | 0.0287 (11) | −0.0096 (11) | 0.0073 (9) | −0.0059 (10) |
S1—C3 | 1.6745 (17) | C7—H7B | 0.9700 |
O1—C12 | 1.368 (2) | C8—C13 | 1.380 (2) |
O1—C14 | 1.414 (2) | C8—C9 | 1.395 (2) |
N1—C5 | 1.304 (2) | C9—C10 | 1.377 (3) |
N1—N2 | 1.381 (2) | C9—H9 | 0.9300 |
N2—C3 | 1.335 (2) | C10—C11 | 1.382 (3) |
N2—H2 | 0.8600 | C10—H10 | 0.9300 |
C3—N4 | 1.364 (2) | C11—C12 | 1.384 (2) |
N4—C5 | 1.373 (2) | C11—H11 | 0.9300 |
N4—N6 | 1.4029 (19) | C12—C13 | 1.389 (2) |
C5—C7 | 1.483 (2) | C13—H13 | 0.9300 |
N6—H62 | 0.90 (2) | C14—H14A | 0.9600 |
N6—H61 | 0.86 (3) | C14—H14B | 0.9600 |
C7—C8 | 1.521 (2) | C14—H14C | 0.9600 |
C7—H7A | 0.9700 | ||
C12—O1—C14 | 117.84 (15) | C13—C8—C7 | 119.48 (15) |
C5—N1—N2 | 104.16 (13) | C9—C8—C7 | 121.71 (15) |
C3—N2—N1 | 113.69 (14) | C10—C9—C8 | 120.12 (16) |
C3—N2—H2 | 123.2 | C10—C9—H9 | 119.9 |
N1—N2—H2 | 123.2 | C8—C9—H9 | 119.9 |
N2—C3—N4 | 102.72 (14) | C9—C10—C11 | 121.26 (16) |
N2—C3—S1 | 130.12 (13) | C9—C10—H10 | 119.4 |
N4—C3—S1 | 127.17 (12) | C11—C10—H10 | 119.4 |
C3—N4—C5 | 109.59 (13) | C10—C11—C12 | 118.69 (17) |
C3—N4—N6 | 126.24 (14) | C10—C11—H11 | 120.7 |
C5—N4—N6 | 124.17 (14) | C12—C11—H11 | 120.7 |
N1—C5—N4 | 109.83 (15) | O1—C12—C11 | 124.32 (16) |
N1—C5—C7 | 125.34 (15) | O1—C12—C13 | 115.29 (15) |
N4—C5—C7 | 124.83 (14) | C11—C12—C13 | 120.39 (16) |
N4—N6—H62 | 108.4 (14) | C8—C13—C12 | 120.74 (15) |
N4—N6—H61 | 109.5 (17) | C8—C13—H13 | 119.6 |
H62—N6—H61 | 109 (2) | C12—C13—H13 | 119.6 |
C5—C7—C8 | 114.15 (14) | O1—C14—H14A | 109.5 |
C5—C7—H7A | 108.7 | O1—C14—H14B | 109.5 |
C8—C7—H7A | 108.7 | H14A—C14—H14B | 109.5 |
C5—C7—H7B | 108.7 | O1—C14—H14C | 109.5 |
C8—C7—H7B | 108.7 | H14A—C14—H14C | 109.5 |
H7A—C7—H7B | 107.6 | H14B—C14—H14C | 109.5 |
C13—C8—C9 | 118.79 (16) | ||
C5—N1—N2—C3 | −0.81 (19) | C5—C7—C8—C13 | 132.14 (16) |
N1—N2—C3—N4 | 1.00 (18) | C5—C7—C8—C9 | −49.4 (2) |
N1—N2—C3—S1 | −179.11 (13) | C13—C8—C9—C10 | −0.1 (3) |
N2—C3—N4—C5 | −0.80 (17) | C7—C8—C9—C10 | −178.66 (16) |
S1—C3—N4—C5 | 179.30 (13) | C8—C9—C10—C11 | −0.4 (3) |
N2—C3—N4—N6 | 179.29 (16) | C9—C10—C11—C12 | 0.1 (3) |
S1—C3—N4—N6 | −0.6 (3) | C14—O1—C12—C11 | 4.7 (3) |
N2—N1—C5—N4 | 0.25 (18) | C14—O1—C12—C13 | −174.70 (17) |
N2—N1—C5—C7 | −179.94 (15) | C10—C11—C12—O1 | −178.59 (17) |
C3—N4—C5—N1 | 0.36 (19) | C10—C11—C12—C13 | 0.8 (3) |
N6—N4—C5—N1 | −179.74 (16) | C9—C8—C13—C12 | 1.0 (2) |
C3—N4—C5—C7 | −179.46 (15) | C7—C8—C13—C12 | 179.59 (15) |
N6—N4—C5—C7 | 0.4 (3) | O1—C12—C13—C8 | 178.05 (15) |
N1—C5—C7—C8 | −87.4 (2) | C11—C12—C13—C8 | −1.4 (3) |
N4—C5—C7—C8 | 92.39 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7A···O1i | 0.97 | 2.46 | 3.308 (2) | 146 |
N6—H62···N1ii | 0.90 (2) | 2.30 (2) | 3.190 (2) | 174 |
N2—H2···S1iii | 0.86 | 2.60 | 3.377 (1) | 151 |
Symmetry codes: (i) −x+1/2, y+1/2, −z+3/2; (ii) x, y+1, z; (iii) −x+2, −y+2, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C10H12N4OS |
Mr | 236.30 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 7.4580 (3), 5.8006 (2), 25.2817 (10) |
β (°) | 94.513 (4) |
V (Å3) | 1090.32 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.28 |
Crystal size (mm) | 0.3 × 0.2 × 0.1 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Sapphire3 |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2010) |
Tmin, Tmax | 0.946, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15190, 2130, 1748 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.088, 1.03 |
No. of reflections | 2130 |
No. of parameters | 154 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.19, −0.24 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7A···O1i | 0.97 | 2.459 | 3.308 (2) | 146 |
N6—H62···N1ii | 0.90 (2) | 2.30 (2) | 3.190 (2) | 174 |
N2—H2···S1iii | 0.86 | 2.599 | 3.377 (1) | 151 |
Symmetry codes: (i) −x+1/2, y+1/2, −z+3/2; (ii) x, y+1, z; (iii) −x+2, −y+2, −z+2. |
Acknowledgements
RK acknowledges the Department of Science & Technology for the sanction of the single-crystal X-ray diffractometer as a National Facility under a mega research project No. SR/S2/ CMP-47/2003.
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The chemistry of triazoles has received considerable attention in recent years because of their versatility in the synthesis of many other heterocyclic compounds. 1,2,4-Triazole derivatives are well known for their different biological activities, therefore various 1,2,4-triazole derivatives and their N-bridged heterocyclic analogs have been extensively studied (Holla et al., 2001; 2006). The derivatives of 1,2,4-triazole are known to exhibit anti-inflammatory (Mullican et al., 1993), antiviral (Jones et al., 1965), antimicrobial (Cansiz et al., 2001), and antidepressant activity (Kane et al., 1988). Hence, synthesis of the corresponding heterocyclic compounds could be of interest from the viewpoint of chemical reactivity and biological activity. In the title compound (Fig. 1), the bond lengths and angles have normal values (Allen et al., 1987) and are comparable with closely related structures (Chen et al., 2007; Karczmarzyk et al., 2012; Gao et al., 2011). The angles around atom C3 in the triazole ring deviate from the normal angles based on Csp2 hybridization, giving bond angles of 102.72 (14)° and 130.12 (13)° for N2—C3—N4 and N2—C3—S1, respectively. The dihedral angle between the triazole ring (N1/N2/C3/N4/C5) and the benzene ring (C8—C13) is 73.0 (5)°. In the crystal, N—H···S hydrogen bonds connect pairs of inversion related molecules, which are in turn connected by N—H···N hydrogen bonds into chains of rings along [010]. In addition, weak C—H···O hydrogen bonds connect these chains into a two-dimensional network parallel to (102) (Fig. 2).