organic compounds
4-(1H-Pyrrolo[2,3-b]pyridin-2-yl)pyridine
aCardinal Tien College of Healthcare & Management, Taipei, Taiwan 231, Republic of China, bInstitute of Chemistry, Academia Sinica, Nankang, Taipei, Taiwan, Republic of China, and cDepartment of Chemistry, National Taiwan University, Taipei, Taiwan, Republic of China
*Correspondence e-mail: pshuang@ctcn.edu.tw
The 12H9N3, contains two independent molecules in which the dihedral angle between the pyridine and azaindole rings are 8.23 (6) and 9.89 (2)°. In the crystal, both types of molecule are connected by pairs of N—H—N hydrogen bonds into inversion dimers.
of the title compound, CRelated literature
For the production of luminescent organic compounds, see: Liu et al. (2000); Parcerisa et al. (2008). For related structures, see: Huang et al. (2012).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).
Supporting information
https://doi.org/10.1107/S1600536813008672/nc2308sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536813008672/nc2308Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536813008672/nc2308Isup3.cml
The compound was synthesized by the following procedure (Parcerisa et al., 2008). A solution of [3-(2-hydroxy-2-pyridin-4-yl-ethyl)-pyridin-2-yl]-carbamic acid tert-butyl ester (1 mmol and acetonitrile (12 ml) was cooled to ice temperature. Afterwards triethylamine (1.2 mmol) and trifluoromethanesulfonic anhydride (1.1 mmol) was added over a period of 5 min. The mixture was stirred at room temperature for 2 h, trifluoroacetic acid was added (1.5 mmol) and afterwards the mixture was heated under reflux for 1 h. The mixture was cooled to room temperature and neutralized using 2 N NaOH. The aqueous layer was extracted with ethyl ether and the organic extract was washed with brine and aqueous Na2SO4, dried and concentrated. The residue was purified by
using hexane/ethyl acetate (2:8) as followed by recrystallization in CH2Cl2 and hexane to give a white solid in 64% yield. Crystals suitable for X-ray diffraction were grown from a CH2Cl2 solution layered with hexane at room temperature. 1H NMR (CDCl3, 300 MHz): 8.62 (dd, 2 H, J= 1.0, 3.1 Hz), 8.29 (dd, 1 H, J= 1.0, 3.4 Hz), 8.00 (dd, 1 H, J = 1.0, 5.3 Hz), 7.72 (dd, 2 H, J = 1.0, 3.1 Hz), 7.13 (dd, 1 H, J= 3.4, 5.3 Hz), 6.99 (s, 1 H), Anal. Calcd for C12H9N3: C, 73.83; H, 4.65; N, 21.52. Found: C, 74.21; H, 4.40; N, 21.34.H atoms were located in difference map but were positioned with idealized geometry and refined isotropic with Uiso(H) = 1.2Ueq(C,N).
The title compound has been shown to be an precursor for the production of luminescent organic compound (Liu et al., 2000). In the
of the title compound two crystallographically independent molecules are found which shows no large structural differences. Both molecules are nearly coplanar, the dihedral angles between the pyridine and the azaindole rings is 8.23 (6)° and 9.89 (2)° (Huang et al., 2012). Each of these molecules is connected into centrosymmetrically dimers by intermolecular N—H—N hydrogen bonding.For the production of luminescent organic compounds, see: Liu et al. (2000); Parcerisa et al. (2008). For related structures, see: Huang et al. (2012).
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).Fig. 1. Molecular structure of the title compound with labeling and displacement ellipsoids drawn at the 30% probability level. H atoms are shown as small spheres of arbitrary radii. |
C12H9N3 | Z = 4 |
Mr = 195.22 | F(000) = 408 |
Triclinic, P1 | Dx = 1.368 Mg m−3 Dm = 1.368 Mg m−3 Dm measured by not measured |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.5529 (5) Å | Cell parameters from 1585 reflections |
b = 10.0457 (8) Å | θ = 2.6–23.3° |
c = 14.5282 (11) Å | µ = 0.09 mm−1 |
α = 83.372 (2)° | T = 295 K |
β = 86.697 (2)° | Plate, colorless |
γ = 87.427 (2)° | 0.30 × 0.20 × 0.05 mm |
V = 947.69 (13) Å3 |
Bruker SMART APEX CCD area-detector diffractometer | 3329 independent reflections |
Radiation source: fine-focus sealed tube | 2573 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
ω scans | θmax = 25.0°, θmin = 1.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −7→7 |
Tmin = 0.975, Tmax = 0.996 | k = −11→11 |
10193 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.058 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.124 | H-atom parameters constrained |
S = 1.14 | w = 1/[σ2(Fo2) + (0.0442P)2 + 0.126P] where P = (Fo2 + 2Fc2)/3 |
3329 reflections | (Δ/σ)max < 0.001 |
271 parameters | Δρmax = 0.14 e Å−3 |
0 restraints | Δρmin = −0.17 e Å−3 |
C12H9N3 | γ = 87.427 (2)° |
Mr = 195.22 | V = 947.69 (13) Å3 |
Triclinic, P1 | Z = 4 |
a = 6.5529 (5) Å | Mo Kα radiation |
b = 10.0457 (8) Å | µ = 0.09 mm−1 |
c = 14.5282 (11) Å | T = 295 K |
α = 83.372 (2)° | 0.30 × 0.20 × 0.05 mm |
β = 86.697 (2)° |
Bruker SMART APEX CCD area-detector diffractometer | 3329 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 2573 reflections with I > 2σ(I) |
Tmin = 0.975, Tmax = 0.996 | Rint = 0.034 |
10193 measured reflections |
R[F2 > 2σ(F2)] = 0.058 | 0 restraints |
wR(F2) = 0.124 | H-atom parameters constrained |
S = 1.14 | Δρmax = 0.14 e Å−3 |
3329 reflections | Δρmin = −0.17 e Å−3 |
271 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.2449 (3) | 0.99700 (17) | 0.92427 (12) | 0.0443 (5) | |
H1 | 0.1787 | 1.0568 | 0.9532 | 0.053* | |
N2 | −0.0037 (3) | 0.82637 (19) | 0.94609 (13) | 0.0523 (5) | |
N3 | 0.7664 (4) | 1.3698 (2) | 0.86462 (16) | 0.0704 (6) | |
N4 | 0.7252 (3) | 0.97632 (17) | 0.57580 (12) | 0.0452 (5) | |
H4A | 0.6651 | 1.0437 | 0.5450 | 0.054* | |
N5 | 0.4869 (3) | 0.80868 (19) | 0.55706 (13) | 0.0524 (5) | |
N6 | 1.2240 (4) | 1.3404 (2) | 0.62691 (16) | 0.0710 (6) | |
C1 | 0.4379 (3) | 1.0098 (2) | 0.88094 (14) | 0.0423 (5) | |
C2 | 0.4911 (3) | 0.8951 (2) | 0.84219 (15) | 0.0493 (6) | |
H2 | 0.6131 | 0.8780 | 0.8089 | 0.059* | |
C3 | 0.3285 (3) | 0.8067 (2) | 0.86152 (15) | 0.0435 (5) | |
C4 | 0.2881 (4) | 0.6784 (2) | 0.84216 (16) | 0.0548 (6) | |
H4 | 0.3826 | 0.6290 | 0.8083 | 0.066* | |
C5 | 0.1035 (4) | 0.6273 (2) | 0.87473 (17) | 0.0576 (7) | |
H5 | 0.0713 | 0.5418 | 0.8630 | 0.069* | |
C6 | −0.0344 (4) | 0.7025 (2) | 0.92484 (17) | 0.0589 (7) | |
H6 | −0.1580 | 0.6644 | 0.9454 | 0.071* | |
C7 | 0.1773 (3) | 0.8734 (2) | 0.91330 (14) | 0.0416 (5) | |
C8 | 0.5755 (5) | 1.3615 (3) | 0.90108 (19) | 0.0712 (8) | |
H8 | 0.5140 | 1.4376 | 0.9232 | 0.085* | |
C9 | 0.4636 (4) | 1.2481 (2) | 0.90816 (18) | 0.0603 (7) | |
H9 | 0.3301 | 1.2493 | 0.9337 | 0.072* | |
C10 | 0.5497 (3) | 1.1326 (2) | 0.87731 (14) | 0.0445 (5) | |
C11 | 0.7495 (4) | 1.1396 (2) | 0.84044 (16) | 0.0561 (6) | |
H11 | 0.8162 | 1.0644 | 0.8193 | 0.067* | |
C12 | 0.8479 (4) | 1.2578 (3) | 0.83527 (18) | 0.0678 (7) | |
H12 | 0.9811 | 1.2597 | 0.8094 | 0.081* | |
C13 | 0.9063 (3) | 0.9796 (2) | 0.61960 (14) | 0.0424 (5) | |
C14 | 0.9524 (3) | 0.8542 (2) | 0.66219 (15) | 0.0485 (6) | |
H14 | 1.0656 | 0.8293 | 0.6969 | 0.058* | |
C15 | 0.7970 (3) | 0.7688 (2) | 0.64396 (14) | 0.0436 (5) | |
C16 | 0.7536 (4) | 0.6348 (2) | 0.66723 (16) | 0.0554 (6) | |
H16 | 0.8395 | 0.5771 | 0.7035 | 0.066* | |
C17 | 0.5792 (4) | 0.5904 (2) | 0.63473 (17) | 0.0573 (6) | |
H17 | 0.5454 | 0.5012 | 0.6486 | 0.069* | |
C18 | 0.4535 (4) | 0.6788 (2) | 0.58133 (17) | 0.0557 (6) | |
H18 | 0.3366 | 0.6450 | 0.5607 | 0.067* | |
C19 | 0.6574 (3) | 0.8490 (2) | 0.58945 (14) | 0.0415 (5) | |
C20 | 1.0412 (5) | 1.3402 (3) | 0.59264 (18) | 0.0692 (8) | |
H20 | 0.9818 | 1.4225 | 0.5701 | 0.083* | |
C21 | 0.9327 (4) | 1.2275 (2) | 0.58795 (16) | 0.0566 (6) | |
H21 | 0.8044 | 1.2350 | 0.5631 | 0.068* | |
C22 | 1.0152 (3) | 1.1027 (2) | 0.62031 (14) | 0.0444 (5) | |
C23 | 1.2075 (4) | 1.1013 (2) | 0.65608 (17) | 0.0559 (6) | |
H23 | 1.2712 | 1.0205 | 0.6787 | 0.067* | |
C24 | 1.3034 (4) | 1.2199 (3) | 0.65792 (18) | 0.0672 (7) | |
H24 | 1.4319 | 1.2159 | 0.6824 | 0.081* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0419 (10) | 0.0413 (11) | 0.0508 (11) | −0.0013 (8) | 0.0011 (9) | −0.0113 (8) |
N2 | 0.0454 (11) | 0.0507 (12) | 0.0623 (13) | −0.0102 (9) | 0.0003 (9) | −0.0112 (9) |
N3 | 0.0765 (16) | 0.0626 (16) | 0.0714 (15) | −0.0247 (13) | −0.0063 (12) | 0.0053 (12) |
N4 | 0.0435 (11) | 0.0392 (11) | 0.0524 (11) | −0.0022 (8) | −0.0088 (9) | −0.0003 (8) |
N5 | 0.0511 (12) | 0.0480 (12) | 0.0583 (12) | −0.0112 (9) | −0.0108 (9) | 0.0003 (9) |
N6 | 0.0781 (17) | 0.0669 (16) | 0.0707 (15) | −0.0277 (13) | 0.0007 (13) | −0.0125 (12) |
C1 | 0.0354 (12) | 0.0475 (14) | 0.0435 (13) | −0.0009 (10) | −0.0020 (10) | −0.0034 (10) |
C2 | 0.0432 (13) | 0.0539 (15) | 0.0498 (14) | 0.0005 (11) | 0.0038 (11) | −0.0054 (11) |
C3 | 0.0457 (13) | 0.0409 (13) | 0.0441 (13) | 0.0020 (10) | −0.0037 (10) | −0.0057 (10) |
C4 | 0.0627 (16) | 0.0474 (15) | 0.0542 (15) | 0.0029 (12) | 0.0004 (12) | −0.0089 (11) |
C5 | 0.0703 (17) | 0.0414 (14) | 0.0629 (16) | −0.0094 (12) | −0.0066 (13) | −0.0096 (11) |
C6 | 0.0570 (15) | 0.0540 (16) | 0.0674 (17) | −0.0163 (12) | −0.0014 (13) | −0.0095 (13) |
C7 | 0.0408 (12) | 0.0412 (13) | 0.0439 (13) | −0.0038 (10) | −0.0064 (10) | −0.0062 (10) |
C8 | 0.080 (2) | 0.0510 (17) | 0.083 (2) | −0.0045 (14) | −0.0019 (16) | −0.0076 (14) |
C9 | 0.0568 (15) | 0.0499 (16) | 0.0747 (18) | −0.0087 (12) | 0.0038 (13) | −0.0109 (13) |
C10 | 0.0477 (13) | 0.0461 (14) | 0.0394 (12) | −0.0052 (10) | −0.0064 (10) | 0.0002 (10) |
C11 | 0.0500 (14) | 0.0573 (16) | 0.0607 (16) | −0.0104 (12) | 0.0045 (12) | −0.0049 (12) |
C12 | 0.0593 (17) | 0.076 (2) | 0.0665 (18) | −0.0216 (15) | 0.0066 (13) | 0.0018 (15) |
C13 | 0.0394 (12) | 0.0457 (14) | 0.0423 (12) | −0.0011 (10) | −0.0029 (10) | −0.0059 (10) |
C14 | 0.0448 (13) | 0.0499 (15) | 0.0509 (14) | 0.0019 (11) | −0.0111 (11) | −0.0034 (11) |
C15 | 0.0465 (13) | 0.0395 (13) | 0.0439 (13) | 0.0006 (10) | −0.0027 (10) | −0.0016 (10) |
C16 | 0.0632 (16) | 0.0461 (15) | 0.0559 (15) | 0.0016 (12) | −0.0070 (12) | −0.0009 (11) |
C17 | 0.0707 (17) | 0.0407 (14) | 0.0604 (16) | −0.0123 (12) | −0.0045 (13) | −0.0010 (11) |
C18 | 0.0556 (15) | 0.0524 (16) | 0.0595 (15) | −0.0157 (12) | −0.0078 (12) | −0.0004 (12) |
C19 | 0.0431 (12) | 0.0385 (13) | 0.0429 (12) | −0.0062 (10) | −0.0006 (10) | −0.0040 (9) |
C20 | 0.087 (2) | 0.0538 (17) | 0.0668 (18) | −0.0156 (15) | −0.0081 (16) | 0.0007 (13) |
C21 | 0.0595 (15) | 0.0505 (15) | 0.0601 (16) | −0.0079 (12) | −0.0115 (12) | −0.0013 (12) |
C22 | 0.0440 (13) | 0.0497 (14) | 0.0403 (13) | −0.0053 (10) | 0.0007 (10) | −0.0083 (10) |
C23 | 0.0494 (14) | 0.0582 (16) | 0.0618 (16) | −0.0072 (12) | −0.0079 (12) | −0.0093 (12) |
C24 | 0.0570 (16) | 0.082 (2) | 0.0658 (18) | −0.0206 (15) | −0.0063 (13) | −0.0156 (15) |
N1—C7 | 1.366 (2) | C8—H8 | 0.9300 |
N1—C1 | 1.384 (2) | C9—C10 | 1.378 (3) |
N1—H1 | 0.8600 | C9—H9 | 0.9300 |
N2—C7 | 1.338 (3) | C10—C11 | 1.387 (3) |
N2—C6 | 1.343 (3) | C11—C12 | 1.368 (3) |
N3—C12 | 1.329 (3) | C11—H11 | 0.9300 |
N3—C8 | 1.332 (3) | C12—H12 | 0.9300 |
N4—C19 | 1.362 (3) | C13—C14 | 1.367 (3) |
N4—C13 | 1.382 (2) | C13—C22 | 1.457 (3) |
N4—H4A | 0.8600 | C14—C15 | 1.416 (3) |
N5—C19 | 1.334 (3) | C14—H14 | 0.9300 |
N5—C18 | 1.336 (3) | C15—C16 | 1.388 (3) |
N6—C20 | 1.324 (3) | C15—C19 | 1.408 (3) |
N6—C24 | 1.336 (3) | C16—C17 | 1.373 (3) |
C1—C2 | 1.362 (3) | C16—H16 | 0.9300 |
C1—C10 | 1.457 (3) | C17—C18 | 1.384 (3) |
C2—C3 | 1.413 (3) | C17—H17 | 0.9300 |
C2—H2 | 0.9300 | C18—H18 | 0.9300 |
C3—C4 | 1.390 (3) | C20—C21 | 1.374 (3) |
C3—C7 | 1.403 (3) | C20—H20 | 0.9300 |
C4—C5 | 1.373 (3) | C21—C22 | 1.384 (3) |
C4—H4 | 0.9300 | C21—H21 | 0.9300 |
C5—C6 | 1.381 (3) | C22—C23 | 1.390 (3) |
C5—H5 | 0.9300 | C23—C24 | 1.375 (3) |
C6—H6 | 0.9300 | C23—H23 | 0.9300 |
C8—C9 | 1.373 (3) | C24—H24 | 0.9300 |
C7—N1—C1 | 108.49 (17) | C12—C11—H11 | 120.1 |
C7—N1—H1 | 125.8 | C10—C11—H11 | 120.1 |
C1—N1—H1 | 125.8 | N3—C12—C11 | 124.5 (3) |
C7—N2—C6 | 113.4 (2) | N3—C12—H12 | 117.7 |
C12—N3—C8 | 115.3 (2) | C11—C12—H12 | 117.7 |
C19—N4—C13 | 108.82 (17) | C14—C13—N4 | 108.76 (19) |
C19—N4—H4A | 125.6 | C14—C13—C22 | 128.8 (2) |
C13—N4—H4A | 125.6 | N4—C13—C22 | 122.39 (19) |
C19—N5—C18 | 113.62 (19) | C13—C14—C15 | 107.79 (19) |
C20—N6—C24 | 115.3 (2) | C13—C14—H14 | 126.1 |
C2—C1—N1 | 108.75 (19) | C15—C14—H14 | 126.1 |
C2—C1—C10 | 129.1 (2) | C16—C15—C19 | 117.3 (2) |
N1—C1—C10 | 122.06 (19) | C16—C15—C14 | 136.3 (2) |
C1—C2—C3 | 108.01 (19) | C19—C15—C14 | 106.40 (18) |
C1—C2—H2 | 126.0 | C17—C16—C15 | 117.6 (2) |
C3—C2—H2 | 126.0 | C17—C16—H16 | 121.2 |
C4—C3—C7 | 117.2 (2) | C15—C16—H16 | 121.2 |
C4—C3—C2 | 136.3 (2) | C16—C17—C18 | 119.9 (2) |
C7—C3—C2 | 106.46 (19) | C16—C17—H17 | 120.0 |
C5—C4—C3 | 117.6 (2) | C18—C17—H17 | 120.0 |
C5—C4—H4 | 121.2 | N5—C18—C17 | 125.2 (2) |
C3—C4—H4 | 121.2 | N5—C18—H18 | 117.4 |
C4—C5—C6 | 120.1 (2) | C17—C18—H18 | 117.4 |
C4—C5—H5 | 119.9 | N5—C19—N4 | 125.41 (19) |
C6—C5—H5 | 119.9 | N5—C19—C15 | 126.4 (2) |
N2—C6—C5 | 125.0 (2) | N4—C19—C15 | 108.23 (18) |
N2—C6—H6 | 117.5 | N6—C20—C21 | 124.8 (3) |
C5—C6—H6 | 117.5 | N6—C20—H20 | 117.6 |
N2—C7—N1 | 125.10 (19) | C21—C20—H20 | 117.6 |
N2—C7—C3 | 126.6 (2) | C20—C21—C22 | 119.7 (2) |
N1—C7—C3 | 108.29 (18) | C20—C21—H21 | 120.2 |
N3—C8—C9 | 124.4 (3) | C22—C21—H21 | 120.2 |
N3—C8—H8 | 117.8 | C21—C22—C23 | 116.1 (2) |
C9—C8—H8 | 117.8 | C21—C22—C13 | 122.5 (2) |
C8—C9—C10 | 119.7 (2) | C23—C22—C13 | 121.3 (2) |
C8—C9—H9 | 120.1 | C24—C23—C22 | 119.7 (2) |
C10—C9—H9 | 120.1 | C24—C23—H23 | 120.1 |
C9—C10—C11 | 116.3 (2) | C22—C23—H23 | 120.1 |
C9—C10—C1 | 122.5 (2) | N6—C24—C23 | 124.3 (2) |
C11—C10—C1 | 121.1 (2) | N6—C24—H24 | 117.8 |
C12—C11—C10 | 119.7 (2) | C23—C24—H24 | 117.8 |
C7—N1—C1—C2 | 0.5 (2) | C19—N4—C13—C14 | −0.7 (2) |
C7—N1—C1—C10 | 177.80 (18) | C19—N4—C13—C22 | −178.17 (19) |
N1—C1—C2—C3 | −0.2 (2) | N4—C13—C14—C15 | 0.6 (2) |
C10—C1—C2—C3 | −177.3 (2) | C22—C13—C14—C15 | 177.8 (2) |
C1—C2—C3—C4 | 179.9 (2) | C13—C14—C15—C16 | −179.2 (3) |
C1—C2—C3—C7 | −0.1 (2) | C13—C14—C15—C19 | −0.3 (2) |
C7—C3—C4—C5 | 0.3 (3) | C19—C15—C16—C17 | 0.5 (3) |
C2—C3—C4—C5 | −179.7 (2) | C14—C15—C16—C17 | 179.3 (2) |
C3—C4—C5—C6 | 0.0 (4) | C15—C16—C17—C18 | −0.4 (4) |
C7—N2—C6—C5 | 0.4 (3) | C19—N5—C18—C17 | 0.0 (3) |
C4—C5—C6—N2 | −0.3 (4) | C16—C17—C18—N5 | 0.1 (4) |
C6—N2—C7—N1 | 179.2 (2) | C18—N5—C19—N4 | −179.1 (2) |
C6—N2—C7—C3 | −0.1 (3) | C18—N5—C19—C15 | 0.2 (3) |
C1—N1—C7—N2 | −179.9 (2) | C13—N4—C19—N5 | 180.0 (2) |
C1—N1—C7—C3 | −0.5 (2) | C13—N4—C19—C15 | 0.6 (2) |
C4—C3—C7—N2 | −0.2 (3) | C16—C15—C19—N5 | −0.5 (3) |
C2—C3—C7—N2 | 179.8 (2) | C14—C15—C19—N5 | −179.6 (2) |
C4—C3—C7—N1 | −179.60 (18) | C16—C15—C19—N4 | 178.96 (19) |
C2—C3—C7—N1 | 0.4 (2) | C14—C15—C19—N4 | −0.2 (2) |
C12—N3—C8—C9 | −0.9 (4) | C24—N6—C20—C21 | 0.4 (4) |
N3—C8—C9—C10 | 0.8 (4) | N6—C20—C21—C22 | −0.3 (4) |
C8—C9—C10—C11 | 0.2 (4) | C20—C21—C22—C23 | −0.1 (3) |
C8—C9—C10—C1 | −178.6 (2) | C20—C21—C22—C13 | 178.4 (2) |
C2—C1—C10—C9 | 170.0 (2) | C14—C13—C22—C21 | −168.3 (2) |
N1—C1—C10—C9 | −6.7 (3) | N4—C13—C22—C21 | 8.6 (3) |
C2—C1—C10—C11 | −8.7 (4) | C14—C13—C22—C23 | 10.1 (3) |
N1—C1—C10—C11 | 174.5 (2) | N4—C13—C22—C23 | −173.0 (2) |
C9—C10—C11—C12 | −0.9 (3) | C21—C22—C23—C24 | 0.2 (3) |
C1—C10—C11—C12 | 177.9 (2) | C13—C22—C23—C24 | −178.2 (2) |
C8—N3—C12—C11 | 0.0 (4) | C20—N6—C24—C23 | −0.2 (4) |
C10—C11—C12—N3 | 0.9 (4) | C22—C23—C24—N6 | −0.1 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N2i | 0.86 | 2.22 | 3.061 (3) | 167 |
N4—H4A···N5ii | 0.86 | 2.22 | 3.066 (3) | 169 |
Symmetry codes: (i) −x, −y+2, −z+2; (ii) −x+1, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C12H9N3 |
Mr | 195.22 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 295 |
a, b, c (Å) | 6.5529 (5), 10.0457 (8), 14.5282 (11) |
α, β, γ (°) | 83.372 (2), 86.697 (2), 87.427 (2) |
V (Å3) | 947.69 (13) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.30 × 0.20 × 0.05 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.975, 0.996 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10193, 3329, 2573 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.058, 0.124, 1.14 |
No. of reflections | 3329 |
No. of parameters | 271 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.14, −0.17 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), WinGX (Farrugia, 2012).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N2i | 0.86 | 2.22 | 3.061 (3) | 167.0 |
N4—H4A···N5ii | 0.86 | 2.22 | 3.066 (3) | 168.6 |
Symmetry codes: (i) −x, −y+2, −z+2; (ii) −x+1, −y+2, −z+1. |
Acknowledgements
This work is partially supported by the instrumentation center, National Taiwan University, and Cardinal Tien College of Healthcare & Management.
References
Bruker (2001). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Huang, P.-H., Wen, Y.-S. & Shen, J.-Y. (2012). Acta Cryst. E68, o1943. CSD CrossRef IUCr Journals Google Scholar
Liu, S. F., Wu, Q., Schmider, H. L., Aziz, H., Hu, N. X., Popovic, Z. & Wang, S. (2000). J. Am. Chem. Soc. 122, 3671–3678. Web of Science CSD CrossRef CAS Google Scholar
Parcerisa, J., Romero, M. & Pujol, M. D. (2008). Tetrahedron, 64, 500–507. Web of Science CrossRef CAS Google Scholar
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The title compound has been shown to be an precursor for the production of luminescent organic compound (Liu et al., 2000). In the crystal structure of the title compound two crystallographically independent molecules are found which shows no large structural differences. Both molecules are nearly coplanar, the dihedral angles between the pyridine and the azaindole rings is 8.23 (6)° and 9.89 (2)° (Huang et al., 2012). Each of these molecules is connected into centrosymmetrically dimers by intermolecular N—H—N hydrogen bonding.