organic compounds
(Z)-3-(3,4-Dimethoxybenzyl)-1,5-benzothiazepin-4(5H)-one
aDepartment of Organic Chemistry, University of Madras, Maraimalai Campus, Chennai 600 025, India, bDepartment of Chemistry, Pondicherry University, Puducherry 605 014, India, cDepartment of Physics, Sri Balaji Chokkalingam Engineering College, Arni, Thiruvannamalai 632 317, India, and dDepartment of Physics, Thanthai Periyar Government Institute of Technology, Vellore 632 002, India
*Correspondence e-mail: smurugavel27@gmail.com
In the title compound, C18H17NO3S, the thiazepine ring adopts a slightly distorted twist-boat conformation. The dihedral angle between the mean plane of the benzothiazepin ring system and the benzene ring is 60.3 (1)°. In the crystal, molecules are linked by two pairs of inversion-related N—H⋯O and C—H⋯O hydrogen bonds, generating alternating R22(8) and R22(6) ring motifs, respectively, in a zigzag supramolecular chain that runs along the c axis. These chains stack along the a axis via S⋯C [3.424 (2) Å] contacts. A three-dimensional supramolecular network is consolidated by C—H⋯π and π–π interactions [inter-centroid distance between dimethoxybenzene rings = 3.815 (1) Å]. The crystal studied was a non-merohedral twin, with a refined value of the minor twin fraction of 0.2477 (6) .
Related literature
For background to the biology of thiazepine derivatives and for a related structure, see: Bakthadoss et al. (2013). For ring-puckering parameters, see: Cremer & Pople (1975).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536813009598/tk5214sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536813009598/tk5214Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536813009598/tk5214Isup3.cml
A mixture of (Z)-methyl 2-(bromomethyl)-3-(3,4-dimethoxyphenyl)acrylate 2 mmol) and o-aminothiophenol (2 mmol) in the presence of potassium tert-butoxide (4.8 mmol) in dry THF (10 ml) was stirred at room temperature for 1 h. After the completion of the reaction as indicated by TLC, the reaction mixture was concentrated and the resulting crude mass was diluted with water (20 ml) and extracted with ethyl acetate (3 x 20 ml). The organic layer was washed with brine (2 x 20 ml) and dried over anhydrous sodium sulfate. The organic layer was concentrated, which successfully provide the crude final product ((Z)-3-(3,4-dimethoxybenzyl)benzo[b][1,4]thiazepin-4(5H)-one). This product was purified by
on silica gel to afford the title compound in good yield (44%). Single crystals suitable for X-ray diffraction were obtained by slow evaporation of its ethylacetate solution at room temperature.The investigated crystal was found to be a two-component rotational twin. The data for both components were integrated using SAINT and scaled with TWINABS. Final
was perfomed using a HKLF5 file generated by TWINABS with a BASF parameter (0.2477 (6)). Owing to poor agreement, the reflections (-7 5 5), (-7 5 7), (-8 4 - 5), (8 5 5), (2 0 0), (-8 - 5 5), (8 5 - 5), (8 - 5 5), (8 - 5 -5), (-8 - 5 -5), (-8 - 6 5), (-7 5 3), (-8 - 6 -5), (7 - 5 -3), (14 2 2) and (8 - 6 5) were omitted from the final cycles of All the H atoms were positioned geometrically and constrained to ride on their parent atom with C—H = 0.93–0.97 Å and N—H = 0.86 Å, and with Uiso(H)=1.5Ueq for methyl H atoms and 1.2Ueq(C) for other H atoms.The background to the biology and related structure of thiazepin derivatives, has been described recently (Bakthadoss et al., 2013). In view of this biological importance, the
of the title compound has been carried out and the results are presented here.Fig. 1. shows a displacement ellipsoid plot of (I), with the atom numbering scheme. The seven membered thiazepine ring (N1/S1/C1/C2/C7/C8/C9) adopts slightly distorted twist-boat conformation as indicated by puckering parameters (Cremer & Pople, 1975): QT = 0.9884 (11) Å, φ2 = 359.3 (1)° and φ3 = 356.5 (4)°. The dihedral angle between the benzothiazepin ring system and the benzene ring is 60.3 (1)°. The atom O1 deviates by -0.895 (1) Å from the least-squares plane of the thiazepin ring. The sum of angles at N1 atom of the thiazepin ring (359.9°) is in accordance with sp2 The geometric parameters of the title molecule agree well with those reported for a similar structure (Bakthadoss et al., 2013).
In the crystal, molecules are linked by two pairs of inversion-related N1—H1A···O1 and C18—H18B···O3 hydrogen bonds, generating alternate R22(8) and R22(6) ring motifs, respectively, resulting in a zigzag supramolecular chain running along the c axis. These chains stack along the a axis by S1···C4v = 3.424 (2) Å (Symmetry code:(v) = 1/2 - x, -1/2 + y, z) short contacts (Fig. 2 and Table 1). A three-dimensional supramolecular network is consolidated by C4—H4···Cg1iii (symmetry code: (iii) = 1/2 - x, 1/2 - y, 1/2 + z) and C10—H10B···Cg2iv (symmetry code: (iv) = x, -y, -1/2 + z) hydrogen bonds and Cg1—Cg1vi = 3.815 (1) Å (symmetry code: (vi) = -x, y, 3/2 - z) interactions (Fig. 3 and Table 1; Cg1 and Cg2 are the centroids of the C11–C16 and C2–C7 benzene rings, respectively).
For background to the biology of thiazepin derivatives and for a related structure, see: Bakthadoss et al. (2013). For ring-puckering parameters, see: Cremer & Pople (1975).
Data collection: APEX2 (Bruker, 2004); cell
APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. Molecular structure of the title compound showing displacement ellipsoids at the 30% probability level. H atoms are presented as a small spheres of arbitrary radii. | |
Fig. 2. A view of the supramolecular chain showing N—H···O (red dotted lines) and C—H···O (blue dotted lines) hydrogen bonds. The chains stack along the the a axis via S···C (greeen dotted lines) short contacts. | |
Fig. 3. View of three-dimensional supramolecular network down the c axis. The N—H···O, C—H···O, S···C, C—H···π and π—π interactions are shown as red, blue, green, orange and purple dotted lines, respectively. Cg1 and Cg2 are the centroids of the C11–C16 and C2–C7 benzene rings, respectively. |
C18H17NO3S | F(000) = 1376 |
Mr = 327.39 | Dx = 1.354 Mg m−3 |
Orthorhombic, Pbcn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2n 2ab | Cell parameters from 2790 reflections |
a = 19.966 (4) Å | θ = 2.2–24.9° |
b = 10.355 (2) Å | µ = 0.22 mm−1 |
c = 15.536 (3) Å | T = 293 K |
V = 3212.0 (11) Å3 | Block, colourless |
Z = 8 | 0.35 × 0.20 × 0.15 mm |
Bruker APEXII CCD diffractometer | 13227 independent reflections |
Radiation source: fine-focus sealed tube | 8413 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.066 |
Detector resolution: 10.0 pixels mm-1 | θmax = 24.9°, θmin = 2.2° |
ω scans | h = −23→23 |
Absorption correction: multi-scan (TWINABS; Sheldrick, 1997) | k = −12→9 |
Tmin = 0.927, Tmax = 0.968 | l = −18→18 |
13227 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.060 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.175 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0582P)2] where P = (Fo2 + 2Fc2)/3 |
13227 reflections | (Δ/σ)max = 0.001 |
211 parameters | Δρmax = 0.25 e Å−3 |
0 restraints | Δρmin = −0.33 e Å−3 |
C18H17NO3S | V = 3212.0 (11) Å3 |
Mr = 327.39 | Z = 8 |
Orthorhombic, Pbcn | Mo Kα radiation |
a = 19.966 (4) Å | µ = 0.22 mm−1 |
b = 10.355 (2) Å | T = 293 K |
c = 15.536 (3) Å | 0.35 × 0.20 × 0.15 mm |
Bruker APEXII CCD diffractometer | 13227 independent reflections |
Absorption correction: multi-scan (TWINABS; Sheldrick, 1997) | 8413 reflections with I > 2σ(I) |
Tmin = 0.927, Tmax = 0.968 | Rint = 0.066 |
13227 measured reflections |
R[F2 > 2σ(F2)] = 0.060 | 0 restraints |
wR(F2) = 0.175 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.25 e Å−3 |
13227 reflections | Δρmin = −0.33 e Å−3 |
211 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C2 | 0.21158 (10) | 0.01584 (18) | 1.02679 (11) | 0.0320 (5) | |
C3 | 0.26554 (10) | 0.0619 (2) | 1.07376 (13) | 0.0401 (5) | |
H3 | 0.3072 | 0.0225 | 1.0683 | 0.048* | |
C4 | 0.25791 (10) | 0.1650 (2) | 1.12822 (13) | 0.0434 (6) | |
H4 | 0.2939 | 0.1935 | 1.1611 | 0.052* | |
C5 | 0.19688 (11) | 0.2264 (2) | 1.13416 (12) | 0.0405 (5) | |
H5 | 0.1921 | 0.2978 | 1.1700 | 0.049* | |
C6 | 0.14302 (10) | 0.18270 (19) | 1.08740 (11) | 0.0339 (5) | |
H6 | 0.1020 | 0.2249 | 1.0913 | 0.041* | |
C7 | 0.14978 (9) | 0.07580 (18) | 1.03449 (10) | 0.0265 (4) | |
C8 | 0.07914 (10) | −0.00895 (17) | 0.91369 (11) | 0.0300 (5) | |
C9 | 0.13353 (9) | −0.00907 (17) | 0.84820 (11) | 0.0277 (5) | |
C1 | 0.19328 (11) | −0.05969 (19) | 0.86307 (11) | 0.0359 (5) | |
H1 | 0.2230 | −0.0622 | 0.8170 | 0.043* | |
C10 | 0.11450 (10) | 0.04089 (18) | 0.76116 (11) | 0.0332 (5) | |
H10A | 0.0735 | −0.0016 | 0.7432 | 0.040* | |
H10B | 0.1493 | 0.0170 | 0.7206 | 0.040* | |
C11 | 0.10408 (8) | 0.18544 (17) | 0.75624 (10) | 0.0267 (4) | |
C12 | 0.12408 (10) | 0.2698 (2) | 0.81859 (11) | 0.0369 (5) | |
H12 | 0.1440 | 0.2384 | 0.8685 | 0.044* | |
C13 | 0.11523 (10) | 0.4015 (2) | 0.80865 (12) | 0.0406 (5) | |
H13 | 0.1286 | 0.4574 | 0.8522 | 0.049* | |
C14 | 0.08704 (10) | 0.45013 (18) | 0.73534 (12) | 0.0345 (5) | |
C15 | 0.06728 (9) | 0.36546 (19) | 0.67025 (11) | 0.0305 (5) | |
C16 | 0.07503 (9) | 0.23488 (19) | 0.68158 (10) | 0.0298 (5) | |
H16 | 0.0607 | 0.1785 | 0.6388 | 0.036* | |
C18 | 0.02274 (13) | 0.3361 (2) | 0.52964 (13) | 0.0661 (8) | |
H18A | 0.0616 | 0.2902 | 0.5099 | 0.099* | |
H18B | 0.0042 | 0.3852 | 0.4830 | 0.099* | |
H18C | −0.0100 | 0.2756 | 0.5502 | 0.099* | |
C17 | 0.08134 (13) | 0.6638 (2) | 0.78994 (14) | 0.0715 (8) | |
H17A | 0.0536 | 0.6325 | 0.8359 | 0.107* | |
H17B | 0.0665 | 0.7483 | 0.7730 | 0.107* | |
H17C | 0.1270 | 0.6684 | 0.8091 | 0.107* | |
N1 | 0.09093 (8) | 0.02648 (15) | 0.99504 (9) | 0.0325 (4) | |
H1A | 0.0573 | 0.0180 | 1.0291 | 0.039* | |
O1 | 0.02201 (7) | −0.04165 (14) | 0.89186 (8) | 0.0423 (4) | |
O3 | 0.04118 (7) | 0.42072 (13) | 0.59744 (8) | 0.0462 (4) | |
O2 | 0.07680 (8) | 0.57865 (13) | 0.71876 (9) | 0.0498 (4) | |
S1 | 0.22192 (3) | −0.12256 (6) | 0.96130 (3) | 0.04692 (18) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C2 | 0.0340 (13) | 0.0353 (12) | 0.0267 (10) | 0.0018 (10) | −0.0032 (9) | 0.0069 (9) |
C3 | 0.0285 (13) | 0.0482 (15) | 0.0437 (12) | 0.0032 (10) | −0.0051 (9) | 0.0068 (11) |
C4 | 0.0369 (15) | 0.0530 (15) | 0.0404 (12) | −0.0140 (12) | −0.0120 (10) | 0.0064 (11) |
C5 | 0.0447 (14) | 0.0402 (13) | 0.0366 (11) | −0.0090 (11) | −0.0044 (10) | −0.0018 (10) |
C6 | 0.0347 (13) | 0.0359 (13) | 0.0311 (10) | −0.0005 (10) | 0.0000 (9) | 0.0014 (9) |
C7 | 0.0256 (12) | 0.0326 (12) | 0.0214 (9) | −0.0028 (9) | −0.0011 (8) | 0.0067 (9) |
C8 | 0.0302 (13) | 0.0278 (12) | 0.0320 (10) | 0.0017 (9) | −0.0025 (9) | 0.0044 (9) |
C9 | 0.0310 (12) | 0.0249 (11) | 0.0271 (9) | 0.0008 (9) | −0.0016 (8) | −0.0015 (8) |
C1 | 0.0391 (14) | 0.0386 (13) | 0.0300 (10) | 0.0034 (10) | 0.0048 (9) | −0.0031 (9) |
C10 | 0.0394 (13) | 0.0351 (12) | 0.0252 (9) | −0.0004 (9) | 0.0006 (8) | −0.0022 (9) |
C11 | 0.0263 (12) | 0.0297 (11) | 0.0242 (9) | −0.0046 (9) | 0.0029 (8) | 0.0008 (9) |
C12 | 0.0463 (14) | 0.0395 (13) | 0.0248 (10) | −0.0052 (11) | −0.0030 (9) | −0.0008 (9) |
C13 | 0.0524 (15) | 0.0357 (14) | 0.0336 (11) | −0.0129 (11) | 0.0002 (10) | −0.0083 (10) |
C14 | 0.0406 (14) | 0.0246 (12) | 0.0384 (11) | −0.0057 (9) | 0.0126 (10) | −0.0006 (10) |
C15 | 0.0324 (13) | 0.0324 (12) | 0.0265 (10) | 0.0009 (9) | 0.0052 (8) | 0.0046 (9) |
C16 | 0.0319 (13) | 0.0310 (12) | 0.0263 (10) | −0.0039 (9) | 0.0006 (8) | −0.0034 (9) |
C18 | 0.111 (2) | 0.0510 (16) | 0.0358 (13) | 0.0186 (15) | −0.0196 (13) | −0.0014 (11) |
C17 | 0.118 (2) | 0.0342 (15) | 0.0621 (16) | −0.0121 (15) | 0.0208 (15) | −0.0165 (13) |
N1 | 0.0229 (10) | 0.0474 (11) | 0.0273 (8) | −0.0062 (8) | 0.0031 (7) | 0.0024 (8) |
O1 | 0.0294 (9) | 0.0628 (10) | 0.0346 (7) | −0.0108 (7) | −0.0031 (6) | −0.0053 (7) |
O3 | 0.0675 (11) | 0.0373 (9) | 0.0338 (8) | 0.0099 (7) | −0.0051 (7) | 0.0047 (7) |
O2 | 0.0797 (12) | 0.0244 (8) | 0.0452 (8) | −0.0014 (8) | 0.0113 (8) | −0.0036 (7) |
S1 | 0.0543 (4) | 0.0454 (4) | 0.0411 (3) | 0.0223 (3) | −0.0086 (3) | 0.0000 (3) |
C2—C3 | 1.386 (3) | C10—H10B | 0.9700 |
C2—C7 | 1.386 (2) | C11—C12 | 1.364 (2) |
C2—S1 | 1.770 (2) | C11—C16 | 1.394 (2) |
C3—C4 | 1.371 (3) | C12—C13 | 1.383 (3) |
C3—H3 | 0.9300 | C12—H12 | 0.9300 |
C4—C5 | 1.377 (3) | C13—C14 | 1.367 (3) |
C4—H4 | 0.9300 | C13—H13 | 0.9300 |
C5—C6 | 1.374 (3) | C14—O2 | 1.371 (2) |
C5—H5 | 0.9300 | C14—C15 | 1.395 (3) |
C6—C7 | 1.385 (3) | C15—O3 | 1.370 (2) |
C6—H6 | 0.9300 | C15—C16 | 1.372 (3) |
C7—N1 | 1.420 (2) | C16—H16 | 0.9300 |
C8—O1 | 1.237 (2) | C18—O3 | 1.419 (2) |
C8—N1 | 1.337 (2) | C18—H18A | 0.9600 |
C8—C9 | 1.488 (3) | C18—H18B | 0.9600 |
C9—C1 | 1.323 (3) | C18—H18C | 0.9600 |
C9—C10 | 1.497 (2) | C17—O2 | 1.417 (2) |
C1—S1 | 1.7549 (19) | C17—H17A | 0.9600 |
C1—H1 | 0.9300 | C17—H17B | 0.9600 |
C10—C11 | 1.513 (2) | C17—H17C | 0.9600 |
C10—H10A | 0.9700 | N1—H1A | 0.8600 |
C3—C2—C7 | 119.50 (18) | C16—C11—C10 | 117.55 (16) |
C3—C2—S1 | 119.38 (16) | C11—C12—C13 | 120.97 (18) |
C7—C2—S1 | 121.07 (14) | C11—C12—H12 | 119.5 |
C4—C3—C2 | 120.44 (19) | C13—C12—H12 | 119.5 |
C4—C3—H3 | 119.8 | C14—C13—C12 | 120.58 (18) |
C2—C3—H3 | 119.8 | C14—C13—H13 | 119.7 |
C3—C4—C5 | 119.93 (19) | C12—C13—H13 | 119.7 |
C3—C4—H4 | 120.0 | C13—C14—O2 | 125.16 (17) |
C5—C4—H4 | 120.0 | C13—C14—C15 | 119.27 (18) |
C6—C5—C4 | 120.3 (2) | O2—C14—C15 | 115.57 (17) |
C6—C5—H5 | 119.8 | O3—C15—C16 | 124.07 (17) |
C4—C5—H5 | 119.8 | O3—C15—C14 | 116.31 (17) |
C5—C6—C7 | 120.03 (19) | C16—C15—C14 | 119.61 (17) |
C5—C6—H6 | 120.0 | C15—C16—C11 | 121.03 (17) |
C7—C6—H6 | 120.0 | C15—C16—H16 | 119.5 |
C6—C7—C2 | 119.72 (17) | C11—C16—H16 | 119.5 |
C6—C7—N1 | 117.57 (17) | O3—C18—H18A | 109.5 |
C2—C7—N1 | 122.54 (17) | O3—C18—H18B | 109.5 |
O1—C8—N1 | 119.77 (17) | H18A—C18—H18B | 109.5 |
O1—C8—C9 | 119.02 (17) | O3—C18—H18C | 109.5 |
N1—C8—C9 | 121.21 (18) | H18A—C18—H18C | 109.5 |
C1—C9—C8 | 122.60 (17) | H18B—C18—H18C | 109.5 |
C1—C9—C10 | 121.56 (17) | O2—C17—H17A | 109.5 |
C8—C9—C10 | 115.60 (16) | O2—C17—H17B | 109.5 |
C9—C1—S1 | 126.33 (15) | H17A—C17—H17B | 109.5 |
C9—C1—H1 | 116.8 | O2—C17—H17C | 109.5 |
S1—C1—H1 | 116.8 | H17A—C17—H17C | 109.5 |
C9—C10—C11 | 114.99 (15) | H17B—C17—H17C | 109.5 |
C9—C10—H10A | 108.5 | C8—N1—C7 | 130.72 (16) |
C11—C10—H10A | 108.5 | C8—N1—H1A | 114.6 |
C9—C10—H10B | 108.5 | C7—N1—H1A | 114.6 |
C11—C10—H10B | 108.5 | C15—O3—C18 | 116.96 (16) |
H10A—C10—H10B | 107.5 | C14—O2—C17 | 116.60 (16) |
C12—C11—C16 | 118.50 (17) | C1—S1—C2 | 99.30 (9) |
C12—C11—C10 | 123.88 (16) | ||
C7—C2—C3—C4 | 0.7 (3) | C11—C12—C13—C14 | −1.0 (3) |
S1—C2—C3—C4 | −176.75 (15) | C12—C13—C14—O2 | −179.20 (17) |
C2—C3—C4—C5 | −2.3 (3) | C12—C13—C14—C15 | −0.1 (3) |
C3—C4—C5—C6 | 1.7 (3) | C13—C14—C15—O3 | −178.15 (17) |
C4—C5—C6—C7 | 0.5 (3) | O2—C14—C15—O3 | 1.0 (2) |
C5—C6—C7—C2 | −2.1 (3) | C13—C14—C15—C16 | 1.5 (3) |
C5—C6—C7—N1 | 173.30 (16) | O2—C14—C15—C16 | −179.36 (16) |
C3—C2—C7—C6 | 1.5 (3) | O3—C15—C16—C11 | 177.80 (17) |
S1—C2—C7—C6 | 178.92 (13) | C14—C15—C16—C11 | −1.8 (3) |
C3—C2—C7—N1 | −173.68 (16) | C12—C11—C16—C15 | 0.7 (3) |
S1—C2—C7—N1 | 3.7 (2) | C10—C11—C16—C15 | −176.41 (16) |
O1—C8—C9—C1 | −133.7 (2) | O1—C8—N1—C7 | −175.13 (18) |
N1—C8—C9—C1 | 46.7 (3) | C9—C8—N1—C7 | 4.5 (3) |
O1—C8—C9—C10 | 40.8 (2) | C6—C7—N1—C8 | 133.3 (2) |
N1—C8—C9—C10 | −138.76 (18) | C2—C7—N1—C8 | −51.4 (3) |
C8—C9—C1—S1 | −5.3 (3) | C16—C15—O3—C18 | −1.4 (3) |
C10—C9—C1—S1 | −179.56 (14) | C14—C15—O3—C18 | 178.15 (18) |
C1—C9—C10—C11 | −113.1 (2) | C13—C14—O2—C17 | −15.3 (3) |
C8—C9—C10—C11 | 72.2 (2) | C15—C14—O2—C17 | 165.61 (18) |
C9—C10—C11—C12 | 14.1 (3) | C9—C1—S1—C2 | −58.0 (2) |
C9—C10—C11—C16 | −168.94 (16) | C3—C2—S1—C1 | −125.91 (16) |
C16—C11—C12—C13 | 0.7 (3) | C7—C2—S1—C1 | 56.68 (17) |
C10—C11—C12—C13 | 177.59 (18) |
Cg1 and Cg2 are the centroids of the C11–C16 and C2–C7 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.86 | 2.02 | 2.863 (2) | 167 |
C18—H18B···O3ii | 0.96 | 2.53 | 3.445 (3) | 159 |
C4—H4···Cg1iii | 0.93 | 2.57 | 3.450 (2) | 158 |
C10—H10B···Cg2iv | 0.97 | 2.82 | 3.725 (2) | 155 |
Symmetry codes: (i) −x, −y, −z+2; (ii) −x, −y+1, −z+1; (iii) −x+1/2, −y+1/2, z+1/2; (iv) x, −y, z−3/2. |
Experimental details
Crystal data | |
Chemical formula | C18H17NO3S |
Mr | 327.39 |
Crystal system, space group | Orthorhombic, Pbcn |
Temperature (K) | 293 |
a, b, c (Å) | 19.966 (4), 10.355 (2), 15.536 (3) |
V (Å3) | 3212.0 (11) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.22 |
Crystal size (mm) | 0.35 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (TWINABS; Sheldrick, 1997) |
Tmin, Tmax | 0.927, 0.968 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13227, 13227, 8413 |
Rint | 0.066 |
(sin θ/λ)max (Å−1) | 0.592 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.060, 0.175, 1.02 |
No. of reflections | 13227 |
No. of parameters | 211 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.25, −0.33 |
Computer programs: APEX2 (Bruker, 2004), APEX2 and SAINT (Bruker, 2004), SAINT and XPREP (Bruker, 2004), SHELXS97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 and Cg2 are the centroids of the C11–C16 and C2–C7 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.86 | 2.02 | 2.863 (2) | 167 |
C18—H18B···O3ii | 0.96 | 2.53 | 3.445 (3) | 159 |
C4—H4···Cg1iii | 0.93 | 2.57 | 3.450 (2) | 158 |
C10—H10B···Cg2iv | 0.97 | 2.82 | 3.725 (2) | 155 |
Symmetry codes: (i) −x, −y, −z+2; (ii) −x, −y+1, −z+1; (iii) −x+1/2, −y+1/2, z+1/2; (iv) x, −y, z−3/2. |
Footnotes
‡Additional correspondence author, e-mail: bhakthadoss@yahoo.com.
Acknowledgements
The authors thank Dr Babu Vargheese, SAIF, IIT, Madras, India, for his help with the data collection.
References
Bakthadoss, M., Selvakumar, R., Manikandan, N. & Murugavel, S. (2013). Acta Cryst. E69, o562–o563. CSD CrossRef CAS IUCr Journals Google Scholar
Bruker (2004). APEX2, SAINT and XPREP. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (1997). TWINABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The background to the biology and related structure of thiazepin derivatives, has been described recently (Bakthadoss et al., 2013). In view of this biological importance, the crystal structure of the title compound has been carried out and the results are presented here.
Fig. 1. shows a displacement ellipsoid plot of (I), with the atom numbering scheme. The seven membered thiazepine ring (N1/S1/C1/C2/C7/C8/C9) adopts slightly distorted twist-boat conformation as indicated by puckering parameters (Cremer & Pople, 1975): QT = 0.9884 (11) Å, φ2 = 359.3 (1)° and φ3 = 356.5 (4)°. The dihedral angle between the benzothiazepin ring system and the benzene ring is 60.3 (1)°. The atom O1 deviates by -0.895 (1) Å from the least-squares plane of the thiazepin ring. The sum of angles at N1 atom of the thiazepin ring (359.9°) is in accordance with sp2 hybridization. The geometric parameters of the title molecule agree well with those reported for a similar structure (Bakthadoss et al., 2013).
In the crystal, molecules are linked by two pairs of inversion-related N1—H1A···O1 and C18—H18B···O3 hydrogen bonds, generating alternate R22(8) and R22(6) ring motifs, respectively, resulting in a zigzag supramolecular chain running along the c axis. These chains stack along the a axis by S1···C4v = 3.424 (2) Å (Symmetry code:(v) = 1/2 - x, -1/2 + y, z) short contacts (Fig. 2 and Table 1). A three-dimensional supramolecular network is consolidated by C4—H4···Cg1iii (symmetry code: (iii) = 1/2 - x, 1/2 - y, 1/2 + z) and C10—H10B···Cg2iv (symmetry code: (iv) = x, -y, -1/2 + z) hydrogen bonds and Cg1—Cg1vi = 3.815 (1) Å (symmetry code: (vi) = -x, y, 3/2 - z) interactions (Fig. 3 and Table 1; Cg1 and Cg2 are the centroids of the C11–C16 and C2–C7 benzene rings, respectively).