metal-organic compounds
Bis(μ-4-formylbenzoato-κ2O:O′)bis[(4-formylbenzoato-κ2O,O′)bis(isonicotinamide-κN1)copper(II)]
aDepartment of Chemistry, Kafkas University, 63100 Kars, Turkey, bDepartment of Physics, Sakarya University, 54187 Esentepe, Sakarya, Turkey, and cDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey
*Correspondence e-mail: merzifon@hacettepe.edu.tr
The 2(C8H5O3)4(C6H6N2O)4], contains one half of the complex molecule. The CuII atoms are bridged by the carboxylate groups of two 4-formylbenzoate (FOB) anions. Besides the two bridging FOB anions, one additional chelating FOB anion and two isonicotinamide (INA) ligands complete the distorted CuN2O4 octahedral coordination of each Cu2+ cation. Within the the benzene and pyridine rings are oriented at dihedral angles of 25.1 (3) and 12.6 (3)°, respectively. In the crystal, N—H⋯O and C—H⋯O hydrogen bonds link the molecules into a three-dimensional network. π–π contacts between the pyridine rings [shortest centroid–centroid distance = 3.821 (3) Å] may further stabilize the One of the formyl groups of the two FOB anions is disordered over two sets of sites with an occupancy ratio of 0.65:0.35.
of the centrosymmetric dinuclear title compound, [CuRelated literature
For general background, see: Bigoli et al. (1972); Krishnamachari (1974). For related structures, see: Hökelek (1996, 2009a,b,c)); Greenaway et al. (1984); Necefoğlu et al. (2011).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012) and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536813010908/wm2735sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536813010908/wm2735Isup2.hkl
The title compound was prepared by the reaction of CuSO4.5H2O (1.25 g, 5 mmol) in H2O (50 ml) and INA (1.22 g, 10 mmol) in H2O (100 ml) with sodium 4-formylbenzoate (1.72 g, 10 mmol) in H2O (100 ml). The mixture was filtered and set aside to crystallize at ambient temperature for several days, giving blue single crystals.
The crystal quality of the obtained crystals was poor. Recrystallization studies in order to get a high quality crystal were not successful. Atom H26 (of one formyl group) was located in a difference Fourier map and refined freely. The remaining H atoms were positioned geometrically with N—H = 0.86%A for NH2 and C—H = 0.93 Å for aromatic H atoms, and constrained to ride on their parent atoms, with Uiso(H) = 1.2 × Ueq(C,N). The other formyl group was found to be disordered over two sets of sites with an occupancy ratio of 0.65:0.35 for O5A, H25A and O5B, H25B. The highest residual electron density was found 0.71 Å from H26 and the deepest hole 0.84 Å from Cu1.
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound , [Cu2(C8H5O3)4(C6H6N2O)4], was synthesized and its
is reported herein.The
of the centrosymmetric dinuclear title compound contains one half of the complex molecule. The structures of some DENA and/or NA complexes with ZnII, viz. [Zn2(C11H14NO2)4(C10H14N2O)2] (Hökelek et al., 2009a), [Zn2(C8H8NO2)4(C10H14N2O)2].2H2O (Hökelek et al., 2009b) and [Zn2(C7H4FO2)4(C6H6N2O)2].C7H5FO2 (Hökelek et al., 2009c) have also been determined.In the title dinuclear compound the Cu2+ cations are bridged by two carboxylate groups of two 4-formylbenzoate (FOB) anions. The two bridging FOB anions, one chelating FOB anion and two isonicotinamide (INA) ligands coordinate to each Cu2+ cation in a distorted octahedral geometry. Each CuII atom is surrounded by three FOB anions and two INA ligands. The INA ligands are coordinated to the CuII ion through pyridine N atoms only. Two FOB anions act as bridging ligands, while the other FOB anion is coordinated to the CuII ion bidentately. The Cu1···Cu1a distance is 4.1554 (8) Å. The four O atoms around the Cu1 atom form a distorted square-planar arrangement with an average Cu1—O bond length of 2.23 Å (Table 1). The distorted octahedral coordination is completed by the pyridine atoms, N1 and N2 of the INA ligands at distances of 2.033 (4) and 2.013 (4) Å, respectively (Table 1, Fig. 1). The N1—Cu1···Cu1a and N2—Cu1···Cu1a angles (a = x, - y, - z) are 97.62 (12) and 77.27 (12) °, respectively. The dihedral angles between the planar carboxylate groups (O1/O2/C1), (O3/O4/C8) and the adjacent benzene rings A (C2—C7), B (C9—C14) are 11.3 (6)° and 2.1 (6)°, respectively, while that between rings A and B is A/B = 25.1 (3)°. The pyridine rings C (N1/C15—C19) and D (N2/C20—C24) are oriented at a dihedral angle of 12.6 (3)°. The O1—Cu1—O2 angle involving the chelating FOB anion is 53.50 (14)°.
The corresponding O—Cu—O angles are 57.75 (2)° in [Cu(C7H4FO2)2(C7H5FO2)(C6H6N2O)2] (Necefoğlu et al., 2011), 58.3 (3)° in [Cu(C7H5O2)2(C10H14N2O)2] (Hökelek et al., 1996) and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) (Greenaway et al., 1984).
In the π–π contact between the pyridine rings, Cg3—Cg4i [symmetry code: (i) 1 - x, 1 - y, - z, where Cg3 and Cg4 are the centroids of the rings C (N1/C15—C19) and D (N2/C20—C24), respectively] may further stabilize the structure, with a centroid-centroid distance of 3.821 (3) Å.
N—H···O and C–H···O hydrogen bonds (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure. The shortestFor general background, see: Bigoli et al. (1972); Krishnamachari (1974). For related structures, see: Hökelek (1996, 2009a,b,c)); Greenaway et al. (1984); Necefoğlu et al. (2011).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title molecule with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen atoms have been omitted for clarity [symmetry operator: (a) - x, - y, - z]. |
[Cu2(C8H5O3)4(C6H6N2O)4] | Z = 1 |
Mr = 1212.09 | F(000) = 622 |
Triclinic, P1 | Dx = 1.550 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.6462 (2) Å | Cell parameters from 6407 reflections |
b = 11.6709 (3) Å | θ = 2.4–27.8° |
c = 13.4339 (4) Å | µ = 0.90 mm−1 |
α = 87.876 (3)° | T = 100 K |
β = 83.483 (3)° | Rod, blue |
γ = 74.566 (2)° | 0.17 × 0.07 × 0.06 mm |
V = 1298.24 (6) Å3 |
Bruker Kappa APEXII CCD area-detector diffractometer | 6198 independent reflections |
Radiation source: fine-focus sealed tube | 4412 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.189 |
φ and ω scans | θmax = 28.2°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −11→11 |
Tmin = 0.927, Tmax = 0.947 | k = −15→15 |
19200 measured reflections | l = −16→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.078 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.204 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | w = 1/[σ2(Fo2) + (0.076P)2 + 1.153P] where P = (Fo2 + 2Fc2)/3 |
6198 reflections | (Δ/σ)max < 0.001 |
389 parameters | Δρmax = 1.05 e Å−3 |
119 restraints | Δρmin = −1.51 e Å−3 |
[Cu2(C8H5O3)4(C6H6N2O)4] | γ = 74.566 (2)° |
Mr = 1212.09 | V = 1298.24 (6) Å3 |
Triclinic, P1 | Z = 1 |
a = 8.6462 (2) Å | Mo Kα radiation |
b = 11.6709 (3) Å | µ = 0.90 mm−1 |
c = 13.4339 (4) Å | T = 100 K |
α = 87.876 (3)° | 0.17 × 0.07 × 0.06 mm |
β = 83.483 (3)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 6198 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4412 reflections with I > 2σ(I) |
Tmin = 0.927, Tmax = 0.947 | Rint = 0.189 |
19200 measured reflections |
R[F2 > 2σ(F2)] = 0.078 | 119 restraints |
wR(F2) = 0.204 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | Δρmax = 1.05 e Å−3 |
6198 reflections | Δρmin = −1.51 e Å−3 |
389 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.62806 (7) | 0.56954 (5) | 0.88371 (4) | 0.0185 (2) | |
O1 | 0.6218 (4) | 0.7313 (3) | 0.8280 (2) | 0.0219 (8) | |
O2 | 0.8235 (4) | 0.6237 (3) | 0.7243 (3) | 0.0242 (8) | |
O3 | 0.7284 (4) | 0.3990 (3) | 0.8858 (2) | 0.0236 (8) | |
O4 | 0.6139 (4) | 0.3497 (3) | 1.0325 (3) | 0.0234 (8) | |
O5A | 0.5585 (8) | 1.2043 (6) | 0.4824 (4) | 0.0358 (16) | 0.65 |
O5B | 0.7922 (16) | 1.1019 (11) | 0.3972 (9) | 0.036 (3) | 0.35 |
O6 | 0.9826 (6) | −0.2505 (4) | 0.9067 (4) | 0.0539 (13) | |
O7 | 0.1544 (5) | 0.6109 (4) | 0.4944 (3) | 0.0413 (11) | |
O8 | 0.7785 (6) | 0.7769 (5) | 1.3297 (4) | 0.075 (2) | |
N1 | 0.5025 (5) | 0.5434 (4) | 0.7713 (3) | 0.0192 (8) | |
N2 | 0.7236 (5) | 0.6046 (4) | 1.0053 (3) | 0.0205 (9) | |
N3 | 0.2635 (6) | 0.4147 (4) | 0.4793 (3) | 0.0273 (10) | |
H3A | 0.2147 | 0.4101 | 0.4278 | 0.033* | |
H3B | 0.3264 | 0.3518 | 0.5024 | 0.033* | |
N4 | 0.9885 (5) | 0.6171 (4) | 1.3195 (3) | 0.0250 (9) | |
H4A | 1.0185 | 0.6325 | 1.3753 | 0.030* | |
H4B | 1.0426 | 0.5553 | 1.2859 | 0.030* | |
C1 | 0.7234 (6) | 0.7203 (4) | 0.7504 (4) | 0.0206 (10) | |
C2 | 0.7188 (6) | 0.8266 (4) | 0.6842 (4) | 0.0222 (10) | |
C3 | 0.8351 (7) | 0.8206 (5) | 0.6028 (4) | 0.0259 (11) | |
H3 | 0.9212 | 0.7530 | 0.5934 | 0.031* | |
C4 | 0.8234 (7) | 0.9140 (5) | 0.5363 (4) | 0.0299 (12) | |
H4 | 0.9015 | 0.9094 | 0.4819 | 0.036* | |
C5 | 0.6953 (8) | 1.0154 (5) | 0.5500 (4) | 0.0325 (13) | |
C6 | 0.5786 (7) | 1.0235 (5) | 0.6324 (4) | 0.0339 (13) | |
H6 | 0.4930 | 1.0913 | 0.6421 | 0.041* | |
C7 | 0.5923 (7) | 0.9294 (5) | 0.6992 (4) | 0.0286 (12) | |
H7 | 0.5163 | 0.9346 | 0.7548 | 0.034* | |
C8 | 0.6975 (5) | 0.3243 (4) | 0.9504 (3) | 0.0172 (9) | |
C9 | 0.7701 (6) | 0.1950 (4) | 0.9257 (4) | 0.0217 (10) | |
C10 | 0.7451 (7) | 0.1082 (5) | 0.9932 (4) | 0.0269 (11) | |
H10 | 0.6821 | 0.1294 | 1.0539 | 0.032* | |
C11 | 0.8139 (7) | −0.0111 (5) | 0.9706 (5) | 0.0319 (12) | |
H11 | 0.7989 | −0.0695 | 1.0168 | 0.038* | |
C12 | 0.9055 (7) | −0.0432 (5) | 0.8787 (5) | 0.0330 (13) | |
C13 | 0.9269 (7) | 0.0436 (5) | 0.8116 (4) | 0.0322 (13) | |
H13 | 0.9874 | 0.0222 | 0.7502 | 0.039* | |
C14 | 0.8600 (7) | 0.1626 (5) | 0.8333 (4) | 0.0283 (12) | |
H14 | 0.8749 | 0.2207 | 0.7866 | 0.034* | |
C15 | 0.3770 (6) | 0.6306 (5) | 0.7469 (4) | 0.0233 (10) | |
H15 | 0.3460 | 0.6994 | 0.7850 | 0.028* | |
C16 | 0.2918 (6) | 0.6235 (4) | 0.6686 (4) | 0.0233 (10) | |
H16 | 0.2064 | 0.6869 | 0.6537 | 0.028* | |
C17 | 0.3337 (6) | 0.5212 (4) | 0.6115 (3) | 0.0211 (10) | |
C18 | 0.4627 (7) | 0.4294 (5) | 0.6364 (4) | 0.0259 (11) | |
H18 | 0.4936 | 0.3591 | 0.6002 | 0.031* | |
C19 | 0.5449 (6) | 0.4434 (4) | 0.7153 (4) | 0.0223 (10) | |
H19 | 0.6324 | 0.3820 | 0.7308 | 0.027* | |
C20 | 0.6678 (6) | 0.7138 (4) | 1.0458 (4) | 0.0202 (10) | |
H20 | 0.5980 | 0.7726 | 1.0117 | 0.024* | |
C21 | 0.7102 (6) | 0.7416 (5) | 1.1354 (4) | 0.0237 (11) | |
H21 | 0.6680 | 0.8175 | 1.1618 | 0.028* | |
C22 | 0.8170 (6) | 0.6553 (5) | 1.1866 (4) | 0.0215 (10) | |
C23 | 0.8753 (6) | 0.5437 (4) | 1.1446 (4) | 0.0206 (10) | |
H23 | 0.9476 | 0.4840 | 1.1763 | 0.025* | |
C24 | 0.8253 (6) | 0.5224 (4) | 1.0555 (4) | 0.0204 (10) | |
H24 | 0.8643 | 0.4466 | 1.0285 | 0.024* | |
C25 | 0.6803 (9) | 1.1107 (6) | 0.4732 (4) | 0.0406 (15) | |
H25A | 0.748 (11) | 1.094 (8) | 0.410 (4) | 0.035* | 0.65 |
H25B | 0.622 (17) | 1.188 (4) | 0.500 (10) | 0.035* | 0.35 |
C26 | 0.9852 (8) | −0.1697 (6) | 0.8536 (5) | 0.0397 (15) | |
H26 | 1.042 (5) | −0.189 (4) | 0.793 (2) | 0.016 (14)* | |
C27 | 0.2415 (6) | 0.5188 (5) | 0.5231 (4) | 0.0241 (11) | |
C28 | 0.8602 (7) | 0.6880 (5) | 1.2856 (4) | 0.0268 (11) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0193 (4) | 0.0219 (3) | 0.0121 (3) | −0.0046 (2) | 0.0078 (2) | −0.0045 (2) |
O1 | 0.029 (2) | 0.0195 (16) | 0.0144 (17) | −0.0054 (15) | 0.0067 (14) | −0.0028 (13) |
O2 | 0.025 (2) | 0.0264 (17) | 0.0173 (18) | −0.0027 (15) | 0.0065 (15) | −0.0011 (14) |
O3 | 0.033 (2) | 0.0251 (17) | 0.0121 (17) | −0.0100 (16) | 0.0039 (15) | −0.0005 (14) |
O4 | 0.0201 (19) | 0.0293 (18) | 0.0181 (18) | −0.0055 (15) | 0.0093 (14) | −0.0068 (14) |
O5A | 0.048 (4) | 0.034 (3) | 0.023 (3) | −0.011 (3) | 0.004 (3) | 0.000 (3) |
O5B | 0.050 (9) | 0.027 (5) | 0.027 (6) | −0.009 (5) | 0.014 (5) | 0.008 (5) |
O6 | 0.046 (3) | 0.037 (2) | 0.079 (4) | −0.008 (2) | −0.008 (3) | −0.009 (2) |
O7 | 0.046 (3) | 0.038 (2) | 0.033 (2) | 0.006 (2) | −0.015 (2) | −0.0141 (19) |
O8 | 0.062 (3) | 0.083 (4) | 0.053 (3) | 0.043 (3) | −0.034 (3) | −0.053 (3) |
N1 | 0.015 (2) | 0.026 (2) | 0.015 (2) | −0.0069 (16) | 0.0081 (16) | −0.0036 (16) |
N2 | 0.023 (2) | 0.024 (2) | 0.014 (2) | −0.0075 (17) | 0.0065 (16) | −0.0044 (15) |
N3 | 0.038 (3) | 0.029 (2) | 0.015 (2) | −0.008 (2) | 0.0000 (19) | −0.0048 (17) |
N4 | 0.025 (2) | 0.031 (2) | 0.015 (2) | −0.0040 (19) | 0.0050 (18) | −0.0084 (18) |
C1 | 0.023 (3) | 0.025 (2) | 0.013 (2) | −0.006 (2) | 0.0030 (19) | −0.0040 (18) |
C2 | 0.025 (3) | 0.024 (2) | 0.016 (2) | −0.007 (2) | 0.006 (2) | −0.0051 (19) |
C3 | 0.028 (3) | 0.029 (2) | 0.019 (3) | −0.007 (2) | 0.006 (2) | −0.003 (2) |
C4 | 0.039 (3) | 0.033 (3) | 0.018 (3) | −0.014 (2) | 0.010 (2) | −0.003 (2) |
C5 | 0.050 (4) | 0.029 (3) | 0.019 (3) | −0.014 (2) | 0.006 (2) | 0.001 (2) |
C6 | 0.039 (4) | 0.027 (3) | 0.031 (3) | −0.003 (2) | 0.002 (2) | 0.000 (2) |
C7 | 0.032 (3) | 0.029 (2) | 0.021 (3) | −0.005 (2) | 0.011 (2) | −0.003 (2) |
C8 | 0.005 (2) | 0.024 (2) | 0.019 (2) | −0.0007 (18) | 0.0043 (18) | −0.0035 (18) |
C9 | 0.015 (3) | 0.024 (2) | 0.023 (3) | −0.0026 (19) | 0.006 (2) | −0.0065 (19) |
C10 | 0.022 (3) | 0.029 (2) | 0.027 (3) | −0.006 (2) | 0.006 (2) | −0.003 (2) |
C11 | 0.030 (3) | 0.026 (2) | 0.041 (3) | −0.010 (2) | −0.006 (2) | 0.004 (2) |
C12 | 0.027 (3) | 0.030 (3) | 0.042 (3) | −0.005 (2) | −0.004 (3) | −0.011 (2) |
C13 | 0.026 (3) | 0.034 (3) | 0.031 (3) | 0.000 (2) | 0.008 (2) | −0.016 (2) |
C14 | 0.027 (3) | 0.028 (3) | 0.026 (3) | −0.005 (2) | 0.008 (2) | −0.006 (2) |
C15 | 0.020 (3) | 0.027 (2) | 0.018 (3) | −0.002 (2) | 0.009 (2) | −0.007 (2) |
C16 | 0.021 (3) | 0.025 (2) | 0.020 (3) | −0.002 (2) | 0.006 (2) | −0.005 (2) |
C17 | 0.022 (3) | 0.029 (2) | 0.011 (2) | −0.008 (2) | 0.0121 (19) | −0.0041 (19) |
C18 | 0.030 (3) | 0.029 (2) | 0.016 (2) | −0.007 (2) | 0.010 (2) | −0.010 (2) |
C19 | 0.022 (3) | 0.024 (2) | 0.016 (2) | −0.001 (2) | 0.010 (2) | −0.0061 (19) |
C20 | 0.017 (3) | 0.022 (2) | 0.016 (2) | −0.0008 (19) | 0.0081 (19) | −0.0033 (18) |
C21 | 0.024 (3) | 0.025 (2) | 0.018 (2) | −0.002 (2) | 0.007 (2) | −0.0076 (19) |
C22 | 0.019 (3) | 0.030 (2) | 0.013 (2) | −0.006 (2) | 0.0054 (19) | −0.0025 (19) |
C23 | 0.021 (3) | 0.023 (2) | 0.014 (2) | −0.0026 (19) | 0.0085 (19) | −0.0035 (18) |
C24 | 0.016 (3) | 0.026 (2) | 0.015 (2) | −0.0045 (19) | 0.0124 (19) | −0.0042 (19) |
C25 | 0.063 (5) | 0.034 (3) | 0.024 (3) | −0.013 (3) | 0.002 (3) | 0.001 (2) |
C26 | 0.035 (4) | 0.034 (3) | 0.052 (4) | −0.009 (3) | −0.016 (3) | −0.003 (3) |
C27 | 0.025 (3) | 0.034 (3) | 0.012 (2) | −0.010 (2) | 0.011 (2) | −0.007 (2) |
C28 | 0.024 (3) | 0.035 (3) | 0.018 (3) | −0.001 (2) | 0.005 (2) | −0.010 (2) |
Cu1—O1 | 1.994 (3) | C7—C6 | 1.382 (8) |
Cu1—O2 | 2.736 (4) | C7—H7 | 0.9300 |
Cu1—O3 | 1.949 (4) | C8—C9 | 1.506 (7) |
Cu1—O4i | 2.242 (3) | C9—C10 | 1.378 (7) |
Cu1—N1 | 2.033 (4) | C9—C14 | 1.395 (7) |
Cu1—N2 | 2.013 (4) | C10—H10 | 0.9300 |
O1—C1 | 1.271 (6) | C11—C10 | 1.390 (7) |
O2—C1 | 1.259 (6) | C11—C12 | 1.395 (8) |
O3—C8 | 1.264 (6) | C11—H11 | 0.9300 |
O4—C8 | 1.248 (6) | C12—C13 | 1.366 (9) |
O4—Cu1i | 2.242 (3) | C13—H13 | 0.9300 |
O5A—C25 | 1.299 (9) | C14—C13 | 1.384 (7) |
O5A—H25B | 0.61 (19) | C14—H14 | 0.9300 |
O5B—C25 | 1.311 (11) | C15—C16 | 1.367 (7) |
O5B—H25A | 0.43 (10) | C15—H15 | 0.9300 |
O6—C26 | 1.165 (8) | C16—H16 | 0.9300 |
O7—C27 | 1.215 (7) | C17—C16 | 1.385 (6) |
N1—C15 | 1.338 (7) | C17—C27 | 1.508 (7) |
N1—C19 | 1.356 (6) | C18—C17 | 1.388 (8) |
N2—C20 | 1.349 (6) | C18—H18 | 0.9300 |
N2—C24 | 1.336 (7) | C19—C18 | 1.379 (7) |
N3—C27 | 1.328 (6) | C19—H19 | 0.9300 |
N3—H3A | 0.8600 | C20—C21 | 1.371 (7) |
N3—H3B | 0.8600 | C20—H20 | 0.9300 |
N4—C28 | 1.312 (7) | C21—C22 | 1.392 (7) |
N4—H4A | 0.8600 | C21—H21 | 0.9300 |
N4—H4B | 0.8600 | C22—C28 | 1.511 (7) |
C1—C2 | 1.494 (7) | C23—C22 | 1.381 (7) |
C3—C4 | 1.374 (7) | C23—C24 | 1.370 (7) |
C3—C2 | 1.389 (7) | C23—H23 | 0.9300 |
C3—H3 | 0.9300 | C24—H24 | 0.9300 |
C4—H4 | 0.9300 | C25—H25A | 0.97 (2) |
C5—C4 | 1.391 (8) | C25—H25B | 0.97 (2) |
C5—C25 | 1.479 (8) | C26—C12 | 1.487 (8) |
C6—C5 | 1.398 (8) | C26—H26 | 0.90 (2) |
C6—H6 | 0.9300 | C28—O8 | 1.220 (6) |
C7—C2 | 1.395 (7) | ||
O1—Cu1—O4i | 87.34 (13) | C12—C11—H11 | 120.0 |
O1—Cu1—N1 | 88.89 (15) | C11—C12—C26 | 121.4 (6) |
O1—Cu1—N2 | 90.93 (15) | C13—C12—C11 | 119.4 (5) |
O3—Cu1—O1 | 150.35 (14) | C13—C12—C26 | 119.2 (5) |
O3—Cu1—O4i | 121.93 (13) | C12—C13—C14 | 121.2 (5) |
O3—Cu1—N1 | 88.74 (16) | C12—C13—H13 | 119.4 |
O3—Cu1—N2 | 95.15 (16) | C14—C13—H13 | 119.4 |
N1—Cu1—O4i | 85.80 (14) | C9—C14—H14 | 120.3 |
N2—Cu1—O4i | 86.58 (15) | C13—C14—C9 | 119.5 (5) |
N2—Cu1—N1 | 172.37 (16) | C13—C14—H14 | 120.3 |
C1—O1—Cu1 | 108.3 (3) | N1—C15—C16 | 123.3 (4) |
C8—O3—Cu1 | 127.1 (3) | N1—C15—H15 | 118.4 |
C8—O4—Cu1i | 148.5 (3) | C16—C15—H15 | 118.4 |
C15—N1—Cu1 | 119.3 (3) | C15—C16—C17 | 119.6 (5) |
C15—N1—C19 | 117.5 (4) | C15—C16—H16 | 120.2 |
C19—N1—Cu1 | 123.1 (4) | C17—C16—H16 | 120.2 |
C20—N2—Cu1 | 118.3 (4) | C16—C17—C18 | 117.9 (5) |
C24—N2—Cu1 | 123.9 (3) | C16—C17—C27 | 118.0 (5) |
C24—N2—C20 | 117.3 (4) | C18—C17—C27 | 124.1 (4) |
C27—N3—H3A | 120.0 | C17—C18—H18 | 120.3 |
C27—N3—H3B | 120.0 | C19—C18—C17 | 119.4 (4) |
H3A—N3—H3B | 120.0 | C19—C18—H18 | 120.3 |
C28—N4—H4A | 120.0 | N1—C19—C18 | 122.3 (5) |
C28—N4—H4B | 120.0 | N1—C19—H19 | 118.8 |
H4A—N4—H4B | 120.0 | C18—C19—H19 | 118.8 |
O1—C1—C2 | 118.2 (4) | N2—C20—C21 | 122.5 (5) |
O2—C1—O1 | 123.6 (5) | N2—C20—H20 | 118.7 |
O2—C1—C2 | 118.2 (4) | C21—C20—H20 | 118.7 |
C3—C2—C7 | 119.5 (5) | C20—C21—C22 | 119.4 (5) |
C3—C2—C1 | 119.9 (5) | C20—C21—H21 | 120.3 |
C7—C2—C1 | 120.5 (4) | C22—C21—H21 | 120.3 |
C2—C3—H3 | 119.9 | C21—C22—C28 | 118.3 (5) |
C4—C3—C2 | 120.2 (5) | C23—C22—C21 | 118.0 (5) |
C4—C3—H3 | 119.9 | C23—C22—C28 | 123.7 (5) |
C4—C5—C6 | 120.2 (5) | C22—C23—H23 | 120.5 |
C4—C5—C25 | 118.8 (5) | C24—C23—C22 | 119.0 (5) |
C6—C5—C25 | 121.0 (6) | C24—C23—H23 | 120.5 |
C3—C4—C5 | 120.3 (5) | N2—C24—C23 | 123.6 (5) |
C3—C4—H4 | 119.9 | N2—C24—H24 | 118.2 |
C5—C4—H4 | 119.9 | C23—C24—H24 | 118.2 |
C5—C6—H6 | 120.5 | O5A—C25—O5B | 120.1 (8) |
C7—C6—C5 | 119.0 (5) | O5A—C25—C5 | 119.9 (6) |
C7—C6—H6 | 120.5 | O5B—C25—C5 | 119.9 (8) |
C2—C7—H7 | 119.6 | O5A—C25—H25A | 120 (5) |
C6—C7—C2 | 120.8 (5) | C5—C25—H25A | 118 (5) |
C6—C7—H7 | 119.6 | O5B—C25—H25B | 120 (5) |
O3—C8—C9 | 116.7 (4) | C5—C25—H25B | 113 (7) |
O4—C8—O3 | 125.1 (5) | H25A—C25—H25B | 127 (8) |
O4—C8—C9 | 118.2 (4) | O6—C26—C12 | 125.3 (7) |
C10—C9—C8 | 120.2 (4) | O6—C26—H26 | 114 (3) |
C10—C9—C14 | 119.8 (5) | C12—C26—H26 | 120 (3) |
C14—C9—C8 | 120.0 (5) | O7—C27—N3 | 123.4 (5) |
C9—C10—C11 | 120.0 (5) | O7—C27—C17 | 119.3 (5) |
C9—C10—H10 | 120.0 | N3—C27—C17 | 117.3 (5) |
C11—C10—H10 | 120.0 | O8—C28—N4 | 123.1 (5) |
C10—C11—C12 | 120.1 (5) | O8—C28—C22 | 120.3 (5) |
C10—C11—H11 | 120.0 | N4—C28—C22 | 116.6 (4) |
O3—Cu1—O1—C1 | 9.8 (5) | C6—C5—C25—O5A | 0.9 (9) |
O4i—Cu1—O1—C1 | −161.5 (3) | C6—C5—C25—O5B | 179.1 (9) |
N1—Cu1—O1—C1 | −75.7 (3) | C7—C6—C5—C4 | −0.4 (9) |
N2—Cu1—O1—C1 | 111.9 (3) | C7—C6—C5—C25 | 176.2 (6) |
O1—Cu1—O3—C8 | 169.2 (4) | C6—C7—C2—C1 | −173.4 (5) |
O4i—Cu1—O3—C8 | −21.0 (4) | C6—C7—C2—C3 | 2.1 (8) |
N1—Cu1—O3—C8 | −105.2 (4) | C2—C7—C6—C5 | −1.1 (9) |
N2—Cu1—O3—C8 | 68.2 (4) | O3—C8—C9—C10 | 178.6 (5) |
O1—Cu1—N1—C19 | 132.7 (4) | O3—C8—C9—C14 | −2.8 (7) |
O3—Cu1—N1—C15 | 165.9 (4) | O4—C8—C9—C10 | −0.7 (7) |
O3—Cu1—N1—C19 | −17.7 (4) | O4—C8—C9—C14 | 177.9 (5) |
O4i—Cu1—N1—C15 | 43.8 (4) | C8—C9—C10—C11 | −179.2 (5) |
O4i—Cu1—N1—C19 | −139.9 (4) | C14—C9—C10—C11 | 2.2 (8) |
O1—Cu1—N2—C20 | 39.5 (3) | C8—C9—C14—C13 | 179.6 (5) |
O1—Cu1—N2—C24 | −148.6 (4) | C10—C9—C14—C13 | −1.7 (8) |
O3—Cu1—N2—C20 | −169.5 (3) | C12—C11—C10—C9 | −1.4 (8) |
O3—Cu1—N2—C24 | 2.4 (4) | C10—C11—C12—C13 | 0.1 (9) |
O4i—Cu1—N2—C20 | −47.7 (3) | C10—C11—C12—C26 | 178.0 (5) |
O4i—Cu1—N2—C24 | 124.1 (4) | C11—C12—C13—C14 | 0.3 (9) |
Cu1—O1—C1—O2 | −8.7 (6) | C26—C12—C13—C14 | −177.6 (5) |
Cu1—O1—C1—C2 | 168.4 (3) | C9—C14—C13—C12 | 0.5 (9) |
Cu1—O3—C8—O4 | −11.3 (7) | N1—C15—C16—C17 | 1.0 (8) |
Cu1—O3—C8—C9 | 169.5 (3) | C18—C17—C16—C15 | −0.4 (7) |
Cu1i—O4—C8—O3 | 65.4 (8) | C27—C17—C16—C15 | −177.4 (4) |
Cu1i—O4—C8—C9 | −115.4 (6) | C16—C17—C27—O7 | 12.4 (7) |
Cu1—N1—C15—C16 | 176.0 (4) | C16—C17—C27—N3 | −169.0 (4) |
C19—N1—C15—C16 | −0.6 (7) | C18—C17—C27—O7 | −164.4 (5) |
Cu1—N1—C19—C18 | −177.0 (4) | C18—C17—C27—N3 | 14.2 (7) |
C15—N1—C19—C18 | −0.5 (7) | C19—C18—C17—C16 | −0.6 (7) |
Cu1—N2—C20—C21 | 171.6 (4) | C19—C18—C17—C27 | 176.2 (4) |
C24—N2—C20—C21 | −0.8 (7) | N1—C19—C18—C17 | 1.1 (7) |
Cu1—N2—C24—C23 | −172.2 (3) | N2—C20—C21—C22 | 1.2 (7) |
C20—N2—C24—C23 | −0.2 (7) | C20—C21—C22—C23 | −0.5 (7) |
O1—C1—C2—C3 | 175.4 (5) | C20—C21—C22—C28 | −179.4 (4) |
O1—C1—C2—C7 | −9.1 (7) | C21—C22—C28—O8 | 15.8 (8) |
O2—C1—C2—C3 | −7.3 (7) | C21—C22—C28—N4 | −163.5 (5) |
O2—C1—C2—C7 | 168.2 (5) | C23—C22—C28—O8 | −163.0 (6) |
C4—C3—C2—C1 | 174.0 (5) | C23—C22—C28—N4 | 17.6 (7) |
C4—C3—C2—C7 | −1.6 (8) | C24—C23—C22—C21 | −0.5 (7) |
C2—C3—C4—C5 | 0.1 (8) | C24—C23—C22—C28 | 178.3 (4) |
C6—C5—C4—C3 | 0.9 (9) | C22—C23—C24—N2 | 0.9 (7) |
C25—C5—C4—C3 | −175.8 (5) | O6—C26—C12—C11 | −2.0 (10) |
C4—C5—C25—O5A | 177.5 (6) | O6—C26—C12—C13 | 175.9 (6) |
C4—C5—C25—O5B | −4.2 (11) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O2ii | 0.86 | 2.17 | 2.997 (6) | 160 |
N3—H3B···O5Aiii | 0.86 | 2.27 | 3.044 (9) | 149 |
N4—H4A···O7iv | 0.86 | 2.06 | 2.878 (6) | 158 |
N4—H4B···O2v | 0.86 | 2.10 | 2.890 (6) | 152 |
C3—H3···O7vi | 0.93 | 2.52 | 3.391 (7) | 155 |
C6—H6···O8vii | 0.93 | 2.44 | 3.336 (9) | 162 |
C18—H18···O5Aiii | 0.93 | 2.35 | 3.274 (9) | 169 |
C23—H23···O2v | 0.93 | 2.54 | 3.432 (7) | 162 |
C24—H24···O6viii | 0.93 | 2.50 | 3.217 (7) | 134 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) x, y−1, z; (iv) x+1, y, z+1; (v) −x+2, −y+1, −z+2; (vi) x+1, y, z; (vii) −x+1, −y+2, −z+2; (viii) −x+2, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Cu2(C8H5O3)4(C6H6N2O)4] |
Mr | 1212.09 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 8.6462 (2), 11.6709 (3), 13.4339 (4) |
α, β, γ (°) | 87.876 (3), 83.483 (3), 74.566 (2) |
V (Å3) | 1298.24 (6) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.90 |
Crystal size (mm) | 0.17 × 0.07 × 0.06 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.927, 0.947 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19200, 6198, 4412 |
Rint | 0.189 |
(sin θ/λ)max (Å−1) | 0.665 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.078, 0.204, 1.11 |
No. of reflections | 6198 |
No. of parameters | 389 |
No. of restraints | 119 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.05, −1.51 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), WinGX (Farrugia, 2012) and PLATON (Spek, 2009).
Cu1—O1 | 1.994 (3) | Cu1—O4i | 2.242 (3) |
Cu1—O2 | 2.736 (4) | Cu1—N1 | 2.033 (4) |
Cu1—O3 | 1.949 (4) | Cu1—N2 | 2.013 (4) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O2ii | 0.86 | 2.17 | 2.997 (6) | 160 |
N3—H3B···O5Aiii | 0.86 | 2.27 | 3.044 (9) | 149 |
N4—H4A···O7iv | 0.86 | 2.06 | 2.878 (6) | 158 |
N4—H4B···O2v | 0.86 | 2.10 | 2.890 (6) | 152 |
C3—H3···O7vi | 0.93 | 2.52 | 3.391 (7) | 155 |
C6—H6···O8vii | 0.93 | 2.44 | 3.336 (9) | 162 |
C18—H18···O5Aiii | 0.93 | 2.35 | 3.274 (9) | 169 |
C23—H23···O2v | 0.93 | 2.54 | 3.432 (7) | 162 |
C24—H24···O6viii | 0.93 | 2.50 | 3.217 (7) | 134 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) x, y−1, z; (iv) x+1, y, z+1; (v) −x+2, −y+1, −z+2; (vi) x+1, y, z; (vii) −x+1, −y+2, −z+2; (viii) −x+2, −y, −z+2. |
Acknowledgements
The authors are indebted to Anadolu University and the Medicinal Plants and Medicine Research Centre of Anadolu University, Eskişehir, Turkey, for the use of the X-ray diffractometer. This work was supported financially by Kafkas University Research Fund (grant No. 2012-FEF-12).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound , [Cu2(C8H5O3)4(C6H6N2O)4], was synthesized and its crystal structure is reported herein.
The asymmetric unit of the centrosymmetric dinuclear title compound contains one half of the complex molecule. The structures of some DENA and/or NA complexes with ZnII, viz. [Zn2(C11H14NO2)4(C10H14N2O)2] (Hökelek et al., 2009a), [Zn2(C8H8NO2)4(C10H14N2O)2].2H2O (Hökelek et al., 2009b) and [Zn2(C7H4FO2)4(C6H6N2O)2].C7H5FO2 (Hökelek et al., 2009c) have also been determined.
In the title dinuclear compound the Cu2+ cations are bridged by two carboxylate groups of two 4-formylbenzoate (FOB) anions. The two bridging FOB anions, one chelating FOB anion and two isonicotinamide (INA) ligands coordinate to each Cu2+ cation in a distorted octahedral geometry. Each CuII atom is surrounded by three FOB anions and two INA ligands. The INA ligands are coordinated to the CuII ion through pyridine N atoms only. Two FOB anions act as bridging ligands, while the other FOB anion is coordinated to the CuII ion bidentately. The Cu1···Cu1a distance is 4.1554 (8) Å. The four O atoms around the Cu1 atom form a distorted square-planar arrangement with an average Cu1—O bond length of 2.23 Å (Table 1). The distorted octahedral coordination is completed by the pyridine atoms, N1 and N2 of the INA ligands at distances of 2.033 (4) and 2.013 (4) Å, respectively (Table 1, Fig. 1). The N1—Cu1···Cu1a and N2—Cu1···Cu1a angles (a = x, - y, - z) are 97.62 (12) and 77.27 (12) °, respectively. The dihedral angles between the planar carboxylate groups (O1/O2/C1), (O3/O4/C8) and the adjacent benzene rings A (C2—C7), B (C9—C14) are 11.3 (6)° and 2.1 (6)°, respectively, while that between rings A and B is A/B = 25.1 (3)°. The pyridine rings C (N1/C15—C19) and D (N2/C20—C24) are oriented at a dihedral angle of 12.6 (3)°. The O1—Cu1—O2 angle involving the chelating FOB anion is 53.50 (14)°.
The corresponding O—Cu—O angles are 57.75 (2)° in [Cu(C7H4FO2)2(C7H5FO2)(C6H6N2O)2] (Necefoğlu et al., 2011), 58.3 (3)° in [Cu(C7H5O2)2(C10H14N2O)2] (Hökelek et al., 1996) and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) (Greenaway et al., 1984).
In the crystal structure, N—H···O and C–H···O hydrogen bonds (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure. The shortest π–π contact between the pyridine rings, Cg3—Cg4i [symmetry code: (i) 1 - x, 1 - y, - z, where Cg3 and Cg4 are the centroids of the rings C (N1/C15—C19) and D (N2/C20—C24), respectively] may further stabilize the structure, with a centroid-centroid distance of 3.821 (3) Å.