organic compounds
Ethyl 1′′-benzyl-2′′-oxo-2′,3′,5′,6′,7′,7a'-hexahydro-1′H-dispiro[indeno[1,2-b]quinoxaline-11,2′-pyrrolizine-3′,3′′-indoline]-1′-carboxylate monohydrate
aDepartment of Physics, S.M.K. Fomra Institute of Technology, Thaiyur, Chennai 603 103, India, bOrganic Chemistry Division, CSIR-Central Leather Research Institute, Adyar, Chennai 600 020, India, and cDepartment of Physics, Presidency College (Autonomous), Chennai 600 005, India
*Correspondence e-mail: a_sp59@yahoo.in
In the title compound, C38H32N4O3·H2O, the quinoxaline–indene and pyrrolizine systems are essentially planar, with maximum deviations from their mean planes of 0.162 and 0.563 Å, respectively. The pyrrolizine ring forms dihedral angles of 88.53 (5) and 89.95 (8)° with the quinoxaline–indene system and the indoline ring, respectively. The central pyrrolidine ring has an with the C atom bearing the quinoxaline-indene system as the flap. The pyrrolidine ring of the indole system adopts an with the C atom bonded to the pyrrolizine ring N atom as the flap. The five-membered ring attached to the central pyrolidine ring adopts a twisted conformation. In the crystal, O—H⋯N and O—H⋯O hydrogen bonds between water molecules and pyrrolizine N and carbonyl O atoms together with C—H⋯O interactions result in chains along [100].
Related literature
For general background to et al. (2006); Saeedi et al. (2010); Dandia et al. (2011); He et al. (2003). For uses of pyrrolidine and quinoxaline derivatives, see: Amal Raj et al. (2003); Zarranz et al. (2003). For a related structure, see: Srinivasan et al. (2012). For ring conformations, see: Cremer & Pople (1975). For details of the synthesis, see: Azizian et al. (2005).
and their biological activity, see: PradhanExperimental
Crystal data
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Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536813011537/bx2437sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813011537/bx2437Isup2.hkl
Benzyl Isatin( 0.25 mmol), L-proline ( 0.3 mmol), Ethyl Indeno[1,2-b] quinoxalin-11-ylideneacetate( 0.25 mmol) (Azizian et al., 2005) in ethanol refluxed for 60 min. The progress of the reaction was followed by TLC. After completion, the solvent was removed under reduced pressure and the resulting crude product was subjected to
The product was recrystallised from methanol. Single crystals suitable for X-ray diffraction were obtained by slow evaporation of the solution of the title compound in methanol at room temperature.All H atoms were fixed geometrically and allowed to ride on their parent C atoms, with C—H distances fixed in the range 0.93–0.97 Å with Uiso(H) = 1.5Ueq(C) for methyl H 1.2Ueq(C) for other H atoms. The positions of methyl hydrogens were optimized rotationally.
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms are presented as small spheres of arbitrary radius. | |
Fig. 2. The molecular packing viewed down the c axis. Dashed lines shows the intermolecular O-H···O and C-H···O hydrogen bonds. |
C38H32N4O3·H2O | Z = 2 |
Mr = 610.69 | F(000) = 644 |
Triclinic, P1 | Dx = 1.320 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 11.0527 (3) Å | Cell parameters from 5410 reflections |
b = 11.5834 (3) Å | θ = 1.7–25.0° |
c = 12.2015 (3) Å | µ = 0.09 mm−1 |
α = 97.370 (1)° | T = 293 K |
β = 92.037 (1)° | Block, colourless |
γ = 96.810 (1)° | 0.25 × 0.22 × 0.19 mm |
V = 1536.25 (7) Å3 |
Bruker APEXII CCD area detector diffractometer | 5410 independent reflections |
Radiation source: fine-focus sealed tube | 4751 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
ω and ϕ scans | θmax = 25.0°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −13→13 |
Tmin = 0.979, Tmax = 0.984 | k = −13→13 |
21165 measured reflections | l = −14→14 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.040 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.114 | w = 1/[σ2(Fo2) + (0.0592P)2 + 0.5303P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max = 0.001 |
5410 reflections | Δρmax = 0.27 e Å−3 |
422 parameters | Δρmin = −0.31 e Å−3 |
3 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0134 (15) |
C38H32N4O3·H2O | γ = 96.810 (1)° |
Mr = 610.69 | V = 1536.25 (7) Å3 |
Triclinic, P1 | Z = 2 |
a = 11.0527 (3) Å | Mo Kα radiation |
b = 11.5834 (3) Å | µ = 0.09 mm−1 |
c = 12.2015 (3) Å | T = 293 K |
α = 97.370 (1)° | 0.25 × 0.22 × 0.19 mm |
β = 92.037 (1)° |
Bruker APEXII CCD area detector diffractometer | 5410 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | 4751 reflections with I > 2σ(I) |
Tmin = 0.979, Tmax = 0.984 | Rint = 0.027 |
21165 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 3 restraints |
wR(F2) = 0.114 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.27 e Å−3 |
5410 reflections | Δρmin = −0.31 e Å−3 |
422 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.33289 (14) | 0.60474 (13) | 0.97720 (12) | 0.0363 (3) | |
C2 | 0.27983 (16) | 0.53695 (15) | 0.88023 (13) | 0.0472 (4) | |
H2 | 0.1967 | 0.5108 | 0.8754 | 0.057* | |
C3 | 0.34944 (18) | 0.50896 (17) | 0.79262 (14) | 0.0547 (5) | |
H3 | 0.3132 | 0.4640 | 0.7286 | 0.066* | |
C4 | 0.47454 (18) | 0.54734 (16) | 0.79835 (15) | 0.0540 (5) | |
H4 | 0.5207 | 0.5287 | 0.7378 | 0.065* | |
C5 | 0.52933 (16) | 0.61179 (15) | 0.89196 (14) | 0.0487 (4) | |
H5 | 0.6127 | 0.6364 | 0.8951 | 0.058* | |
C6 | 0.46058 (14) | 0.64146 (13) | 0.98405 (13) | 0.0383 (3) | |
C7 | 0.31818 (13) | 0.69142 (12) | 1.15216 (11) | 0.0312 (3) | |
C8 | 0.44754 (13) | 0.72317 (12) | 1.16075 (12) | 0.0338 (3) | |
C9 | 0.48255 (13) | 0.77731 (12) | 1.27325 (12) | 0.0347 (3) | |
C10 | 0.59802 (14) | 0.81928 (14) | 1.32171 (14) | 0.0419 (4) | |
H10 | 0.6670 | 0.8174 | 1.2803 | 0.050* | |
C11 | 0.60769 (15) | 0.86350 (14) | 1.43215 (14) | 0.0438 (4) | |
H11 | 0.6839 | 0.8924 | 1.4660 | 0.053* | |
C12 | 0.50493 (15) | 0.86526 (13) | 1.49326 (13) | 0.0420 (4) | |
H12 | 0.5134 | 0.8941 | 1.5682 | 0.050* | |
C13 | 0.38954 (14) | 0.82503 (13) | 1.44535 (13) | 0.0382 (3) | |
H13 | 0.3210 | 0.8279 | 1.4873 | 0.046* | |
C14 | 0.37783 (13) | 0.78043 (12) | 1.33380 (12) | 0.0322 (3) | |
C15 | 0.26261 (12) | 0.73456 (12) | 1.26003 (11) | 0.0306 (3) | |
C16 | 0.17216 (12) | 0.64178 (12) | 1.30948 (11) | 0.0311 (3) | |
C17 | 0.08006 (12) | 0.57554 (12) | 1.21443 (12) | 0.0324 (3) | |
C18 | 0.22870 (12) | 0.54088 (12) | 1.34875 (12) | 0.0321 (3) | |
C19 | 0.30618 (14) | 0.53514 (14) | 1.43864 (13) | 0.0385 (3) | |
H19 | 0.3328 | 0.6020 | 1.4881 | 0.046* | |
C20 | 0.34386 (15) | 0.42751 (15) | 1.45399 (14) | 0.0436 (4) | |
H20 | 0.3963 | 0.4227 | 1.5141 | 0.052* | |
C21 | 0.30422 (15) | 0.32808 (14) | 1.38100 (14) | 0.0446 (4) | |
H21 | 0.3322 | 0.2575 | 1.3915 | 0.054* | |
C22 | 0.22365 (14) | 0.33140 (13) | 1.29237 (13) | 0.0409 (4) | |
H22 | 0.1954 | 0.2640 | 1.2441 | 0.049* | |
C23 | 0.18692 (13) | 0.43837 (12) | 1.27831 (12) | 0.0331 (3) | |
C24 | 0.04034 (15) | 0.37286 (14) | 1.11225 (13) | 0.0426 (4) | |
H24A | 0.1019 | 0.3390 | 1.0683 | 0.051* | |
H24B | −0.0096 | 0.4104 | 1.0639 | 0.051* | |
C25 | −0.03895 (16) | 0.27579 (15) | 1.15617 (15) | 0.0481 (4) | |
C26 | −0.10008 (19) | 0.2954 (2) | 1.25144 (18) | 0.0668 (6) | |
H26 | −0.0929 | 0.3705 | 1.2906 | 0.080* | |
C27 | −0.1720 (3) | 0.2049 (3) | 1.2897 (3) | 0.1052 (10) | |
H27 | −0.2130 | 0.2196 | 1.3544 | 0.126* | |
C28 | −0.1837 (3) | 0.0943 (3) | 1.2338 (4) | 0.1271 (15) | |
H28 | −0.2319 | 0.0335 | 1.2602 | 0.153* | |
C29 | −0.1241 (4) | 0.0736 (2) | 1.1390 (4) | 0.1244 (14) | |
H29 | −0.1321 | −0.0018 | 1.1004 | 0.149* | |
C30 | −0.0512 (3) | 0.16379 (19) | 1.0990 (2) | 0.0880 (8) | |
H30 | −0.0109 | 0.1487 | 1.0340 | 0.106* | |
C31 | 0.4884 (3) | 1.0676 (3) | 1.1530 (2) | 0.0950 (8) | |
H31A | 0.5302 | 1.1394 | 1.1343 | 0.143* | |
H31B | 0.5261 | 1.0025 | 1.1189 | 0.143* | |
H31C | 0.4930 | 1.0690 | 1.2319 | 0.143* | |
C32 | 0.3595 (2) | 1.05536 (18) | 1.1130 (2) | 0.0722 (6) | |
H32A | 0.3219 | 1.1220 | 1.1463 | 0.087* | |
H32B | 0.3549 | 1.0548 | 1.0334 | 0.087* | |
C33 | 0.24386 (15) | 0.95123 (13) | 1.23835 (13) | 0.0413 (4) | |
C34 | 0.17726 (13) | 0.83303 (12) | 1.25340 (12) | 0.0347 (3) | |
H34 | 0.1176 | 0.8079 | 1.1911 | 0.042* | |
C35 | 0.11039 (14) | 0.83350 (13) | 1.36057 (13) | 0.0382 (3) | |
H35 | 0.1548 | 0.8927 | 1.4170 | 0.046* | |
C36 | −0.02444 (16) | 0.84985 (17) | 1.35917 (17) | 0.0558 (5) | |
H36A | −0.0356 | 0.9317 | 1.3779 | 0.067* | |
H36B | −0.0648 | 0.8201 | 1.2875 | 0.067* | |
C37 | −0.07122 (18) | 0.77731 (19) | 1.44790 (19) | 0.0652 (5) | |
H37A | −0.0531 | 0.8207 | 1.5212 | 0.078* | |
H37B | −0.1586 | 0.7547 | 1.4375 | 0.078* | |
C38 | −0.00303 (15) | 0.67035 (16) | 1.43219 (15) | 0.0481 (4) | |
H38A | 0.0062 | 0.6383 | 1.5012 | 0.058* | |
H38B | −0.0456 | 0.6099 | 1.3772 | 0.058* | |
N1 | 0.26028 (11) | 0.63329 (11) | 1.06378 (10) | 0.0354 (3) | |
N2 | 0.51881 (11) | 0.70233 (11) | 1.07875 (11) | 0.0398 (3) | |
N3 | 0.10044 (11) | 0.46128 (10) | 1.19862 (10) | 0.0352 (3) | |
N4 | 0.11669 (11) | 0.71534 (11) | 1.39436 (10) | 0.0352 (3) | |
O1 | 0.00192 (9) | 0.61759 (9) | 1.16524 (9) | 0.0415 (3) | |
O2 | 0.29325 (13) | 0.94730 (11) | 1.14075 (11) | 0.0604 (4) | |
O3 | 0.25075 (15) | 1.03746 (11) | 1.30440 (12) | 0.0722 (4) | |
O4 | 0.79032 (17) | 0.76464 (16) | 1.09100 (18) | 0.0942 (6) | |
H4A | 0.7036 (15) | 0.730 (2) | 1.091 (2) | 0.113* | |
H4B | 0.832 (2) | 0.701 (2) | 1.116 (2) | 0.113* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0393 (8) | 0.0371 (8) | 0.0333 (8) | 0.0066 (6) | 0.0053 (6) | 0.0052 (6) |
C2 | 0.0447 (9) | 0.0545 (10) | 0.0399 (9) | 0.0048 (7) | 0.0013 (7) | −0.0019 (7) |
C3 | 0.0626 (11) | 0.0619 (11) | 0.0365 (9) | 0.0074 (9) | 0.0049 (8) | −0.0054 (8) |
C4 | 0.0621 (11) | 0.0593 (11) | 0.0406 (9) | 0.0089 (9) | 0.0191 (8) | 0.0016 (8) |
C5 | 0.0465 (9) | 0.0528 (10) | 0.0464 (10) | 0.0018 (8) | 0.0176 (8) | 0.0050 (8) |
C6 | 0.0406 (8) | 0.0363 (8) | 0.0384 (8) | 0.0035 (6) | 0.0085 (6) | 0.0066 (6) |
C7 | 0.0335 (7) | 0.0279 (7) | 0.0328 (7) | 0.0038 (6) | 0.0028 (6) | 0.0059 (6) |
C8 | 0.0332 (7) | 0.0310 (7) | 0.0374 (8) | 0.0023 (6) | 0.0045 (6) | 0.0061 (6) |
C9 | 0.0344 (8) | 0.0301 (7) | 0.0391 (8) | 0.0021 (6) | 0.0006 (6) | 0.0046 (6) |
C10 | 0.0332 (8) | 0.0401 (8) | 0.0507 (9) | 0.0014 (6) | −0.0001 (7) | 0.0037 (7) |
C11 | 0.0389 (8) | 0.0384 (8) | 0.0514 (10) | 0.0023 (7) | −0.0112 (7) | 0.0015 (7) |
C12 | 0.0499 (9) | 0.0355 (8) | 0.0387 (8) | 0.0057 (7) | −0.0084 (7) | 0.0004 (6) |
C13 | 0.0410 (8) | 0.0358 (8) | 0.0371 (8) | 0.0046 (6) | 0.0024 (6) | 0.0019 (6) |
C14 | 0.0334 (7) | 0.0265 (7) | 0.0361 (8) | 0.0021 (5) | −0.0002 (6) | 0.0039 (6) |
C15 | 0.0310 (7) | 0.0286 (7) | 0.0317 (7) | 0.0028 (6) | 0.0018 (6) | 0.0026 (6) |
C16 | 0.0294 (7) | 0.0313 (7) | 0.0322 (7) | 0.0032 (6) | 0.0021 (6) | 0.0035 (6) |
C17 | 0.0285 (7) | 0.0349 (7) | 0.0339 (7) | 0.0003 (6) | 0.0037 (6) | 0.0074 (6) |
C18 | 0.0290 (7) | 0.0333 (7) | 0.0346 (7) | 0.0031 (6) | 0.0051 (6) | 0.0065 (6) |
C19 | 0.0377 (8) | 0.0400 (8) | 0.0374 (8) | 0.0020 (6) | 0.0003 (6) | 0.0065 (6) |
C20 | 0.0402 (8) | 0.0497 (9) | 0.0443 (9) | 0.0073 (7) | −0.0005 (7) | 0.0174 (7) |
C21 | 0.0446 (9) | 0.0382 (8) | 0.0552 (10) | 0.0110 (7) | 0.0062 (7) | 0.0162 (7) |
C22 | 0.0435 (9) | 0.0325 (8) | 0.0467 (9) | 0.0045 (6) | 0.0065 (7) | 0.0044 (6) |
C23 | 0.0326 (7) | 0.0338 (7) | 0.0335 (7) | 0.0027 (6) | 0.0059 (6) | 0.0065 (6) |
C24 | 0.0497 (9) | 0.0412 (9) | 0.0341 (8) | 0.0005 (7) | 0.0010 (7) | −0.0011 (7) |
C25 | 0.0477 (9) | 0.0398 (9) | 0.0538 (10) | −0.0036 (7) | −0.0129 (8) | 0.0074 (7) |
C26 | 0.0652 (13) | 0.0685 (13) | 0.0669 (13) | −0.0072 (10) | 0.0096 (10) | 0.0227 (10) |
C27 | 0.0797 (17) | 0.122 (3) | 0.120 (2) | −0.0198 (17) | 0.0124 (16) | 0.068 (2) |
C28 | 0.089 (2) | 0.103 (3) | 0.190 (4) | −0.0445 (19) | −0.033 (2) | 0.087 (3) |
C29 | 0.126 (3) | 0.0467 (14) | 0.188 (4) | −0.0303 (16) | −0.045 (3) | 0.0187 (19) |
C30 | 0.1015 (19) | 0.0468 (12) | 0.1050 (19) | −0.0101 (12) | −0.0135 (15) | −0.0073 (12) |
C31 | 0.0943 (19) | 0.0915 (18) | 0.100 (2) | −0.0146 (15) | 0.0232 (15) | 0.0334 (15) |
C32 | 0.0932 (17) | 0.0504 (11) | 0.0784 (14) | 0.0043 (11) | 0.0299 (12) | 0.0262 (10) |
C33 | 0.0472 (9) | 0.0336 (8) | 0.0441 (9) | 0.0077 (7) | 0.0030 (7) | 0.0066 (7) |
C34 | 0.0356 (8) | 0.0308 (7) | 0.0378 (8) | 0.0063 (6) | 0.0006 (6) | 0.0038 (6) |
C35 | 0.0392 (8) | 0.0346 (8) | 0.0413 (8) | 0.0092 (6) | 0.0052 (6) | 0.0022 (6) |
C36 | 0.0458 (10) | 0.0592 (11) | 0.0681 (12) | 0.0221 (8) | 0.0132 (9) | 0.0131 (9) |
C37 | 0.0484 (11) | 0.0759 (13) | 0.0773 (14) | 0.0196 (10) | 0.0252 (10) | 0.0170 (11) |
C38 | 0.0409 (9) | 0.0546 (10) | 0.0496 (10) | 0.0036 (7) | 0.0150 (7) | 0.0093 (8) |
N1 | 0.0351 (6) | 0.0369 (7) | 0.0336 (7) | 0.0039 (5) | 0.0034 (5) | 0.0030 (5) |
N2 | 0.0353 (7) | 0.0422 (7) | 0.0405 (7) | −0.0001 (5) | 0.0079 (6) | 0.0035 (6) |
N3 | 0.0369 (7) | 0.0322 (6) | 0.0347 (6) | −0.0002 (5) | −0.0005 (5) | 0.0030 (5) |
N4 | 0.0344 (6) | 0.0350 (6) | 0.0365 (7) | 0.0054 (5) | 0.0081 (5) | 0.0039 (5) |
O1 | 0.0350 (6) | 0.0433 (6) | 0.0458 (6) | 0.0045 (5) | −0.0063 (5) | 0.0076 (5) |
O2 | 0.0844 (9) | 0.0431 (7) | 0.0546 (8) | 0.0008 (6) | 0.0227 (7) | 0.0114 (6) |
O3 | 0.1080 (12) | 0.0355 (7) | 0.0684 (9) | −0.0052 (7) | 0.0259 (8) | −0.0036 (6) |
O4 | 0.0750 (11) | 0.0835 (12) | 0.1217 (15) | −0.0009 (9) | 0.0213 (11) | 0.0098 (11) |
C1—N1 | 1.3795 (19) | C22—H22 | 0.9300 |
C1—C2 | 1.401 (2) | C23—N3 | 1.4106 (19) |
C1—C6 | 1.421 (2) | C24—N3 | 1.4536 (19) |
C2—C3 | 1.367 (2) | C24—C25 | 1.508 (2) |
C2—H2 | 0.9300 | C24—H24A | 0.9700 |
C3—C4 | 1.398 (3) | C24—H24B | 0.9700 |
C3—H3 | 0.9300 | C25—C26 | 1.372 (3) |
C4—C5 | 1.361 (3) | C25—C30 | 1.381 (3) |
C4—H4 | 0.9300 | C26—C27 | 1.380 (3) |
C5—C6 | 1.408 (2) | C26—H26 | 0.9300 |
C5—H5 | 0.9300 | C27—C28 | 1.362 (5) |
C6—N2 | 1.370 (2) | C27—H27 | 0.9300 |
C7—N1 | 1.2994 (19) | C28—C29 | 1.361 (6) |
C7—C8 | 1.430 (2) | C28—H28 | 0.9300 |
C7—C15 | 1.5234 (19) | C29—C30 | 1.392 (5) |
C8—N2 | 1.3111 (19) | C29—H29 | 0.9300 |
C8—C9 | 1.453 (2) | C30—H30 | 0.9300 |
C9—C10 | 1.393 (2) | C31—C32 | 1.475 (4) |
C9—C14 | 1.397 (2) | C31—H31A | 0.9600 |
C10—C11 | 1.375 (2) | C31—H31B | 0.9600 |
C10—H10 | 0.9300 | C31—H31C | 0.9600 |
C11—C12 | 1.381 (2) | C32—O2 | 1.458 (2) |
C11—H11 | 0.9300 | C32—H32A | 0.9700 |
C12—C13 | 1.386 (2) | C32—H32B | 0.9700 |
C12—H12 | 0.9300 | C33—O3 | 1.193 (2) |
C13—C14 | 1.388 (2) | C33—O2 | 1.325 (2) |
C13—H13 | 0.9300 | C33—C34 | 1.512 (2) |
C14—C15 | 1.5329 (19) | C34—C35 | 1.524 (2) |
C15—C34 | 1.5719 (19) | C34—H34 | 0.9800 |
C15—C16 | 1.5725 (19) | C35—N4 | 1.4879 (19) |
C16—N4 | 1.4550 (18) | C35—C36 | 1.524 (2) |
C16—C18 | 1.510 (2) | C35—H35 | 0.9800 |
C16—C17 | 1.5725 (19) | C36—C37 | 1.522 (3) |
C17—O1 | 1.2171 (17) | C36—H36A | 0.9700 |
C17—N3 | 1.3593 (19) | C36—H36B | 0.9700 |
C18—C19 | 1.381 (2) | C37—C38 | 1.520 (3) |
C18—C23 | 1.393 (2) | C37—H37A | 0.9700 |
C19—C20 | 1.393 (2) | C37—H37B | 0.9700 |
C19—H19 | 0.9300 | C38—N4 | 1.4756 (19) |
C20—C21 | 1.379 (2) | C38—H38A | 0.9700 |
C20—H20 | 0.9300 | C38—H38B | 0.9700 |
C21—C22 | 1.384 (2) | O4—H4A | 0.997 (17) |
C21—H21 | 0.9300 | O4—H4B | 0.981 (16) |
C22—C23 | 1.378 (2) | ||
N1—C1—C2 | 119.29 (14) | C25—C24—H24A | 108.9 |
N1—C1—C6 | 121.71 (13) | N3—C24—H24B | 108.9 |
C2—C1—C6 | 119.00 (14) | C25—C24—H24B | 108.9 |
C3—C2—C1 | 120.44 (16) | H24A—C24—H24B | 107.7 |
C3—C2—H2 | 119.8 | C26—C25—C30 | 118.8 (2) |
C1—C2—H2 | 119.8 | C26—C25—C24 | 121.92 (16) |
C2—C3—C4 | 120.58 (16) | C30—C25—C24 | 119.30 (19) |
C2—C3—H3 | 119.7 | C25—C26—C27 | 120.7 (3) |
C4—C3—H3 | 119.7 | C25—C26—H26 | 119.7 |
C5—C4—C3 | 120.48 (16) | C27—C26—H26 | 119.7 |
C5—C4—H4 | 119.8 | C28—C27—C26 | 120.6 (3) |
C3—C4—H4 | 119.8 | C28—C27—H27 | 119.7 |
C4—C5—C6 | 120.45 (16) | C26—C27—H27 | 119.7 |
C4—C5—H5 | 119.8 | C29—C28—C27 | 119.3 (3) |
C6—C5—H5 | 119.8 | C29—C28—H28 | 120.3 |
N2—C6—C5 | 119.23 (14) | C27—C28—H28 | 120.3 |
N2—C6—C1 | 121.73 (13) | C28—C29—C30 | 120.9 (3) |
C5—C6—C1 | 119.02 (15) | C28—C29—H29 | 119.6 |
N1—C7—C8 | 123.16 (13) | C30—C29—H29 | 119.6 |
N1—C7—C15 | 126.77 (12) | C25—C30—C29 | 119.7 (3) |
C8—C7—C15 | 110.07 (12) | C25—C30—H30 | 120.2 |
N2—C8—C7 | 123.60 (13) | C29—C30—H30 | 120.2 |
N2—C8—C9 | 127.85 (13) | C32—C31—H31A | 109.5 |
C7—C8—C9 | 108.53 (12) | C32—C31—H31B | 109.5 |
C10—C9—C14 | 121.61 (14) | H31A—C31—H31B | 109.5 |
C10—C9—C8 | 129.58 (14) | C32—C31—H31C | 109.5 |
C14—C9—C8 | 108.80 (12) | H31A—C31—H31C | 109.5 |
C11—C10—C9 | 118.45 (15) | H31B—C31—H31C | 109.5 |
C11—C10—H10 | 120.8 | O2—C32—C31 | 110.82 (19) |
C9—C10—H10 | 120.8 | O2—C32—H32A | 109.5 |
C10—C11—C12 | 120.43 (15) | C31—C32—H32A | 109.5 |
C10—C11—H11 | 119.8 | O2—C32—H32B | 109.5 |
C12—C11—H11 | 119.8 | C31—C32—H32B | 109.5 |
C11—C12—C13 | 121.47 (15) | H32A—C32—H32B | 108.1 |
C11—C12—H12 | 119.3 | O3—C33—O2 | 123.94 (15) |
C13—C12—H12 | 119.3 | O3—C33—C34 | 125.11 (15) |
C12—C13—C14 | 118.96 (15) | O2—C33—C34 | 110.94 (13) |
C12—C13—H13 | 120.5 | C33—C34—C35 | 113.68 (12) |
C14—C13—H13 | 120.5 | C33—C34—C15 | 114.17 (12) |
C13—C14—C9 | 119.07 (13) | C35—C34—C15 | 103.24 (11) |
C13—C14—C15 | 129.73 (13) | C33—C34—H34 | 108.5 |
C9—C14—C15 | 111.17 (12) | C35—C34—H34 | 108.5 |
C7—C15—C14 | 100.96 (11) | C15—C34—H34 | 108.5 |
C7—C15—C34 | 115.65 (11) | N4—C35—C36 | 105.46 (13) |
C14—C15—C34 | 111.25 (11) | N4—C35—C34 | 105.26 (11) |
C7—C15—C16 | 116.12 (11) | C36—C35—C34 | 119.23 (14) |
C14—C15—C16 | 114.20 (11) | N4—C35—H35 | 108.8 |
C34—C15—C16 | 99.28 (11) | C36—C35—H35 | 108.8 |
N4—C16—C18 | 115.33 (12) | C34—C35—H35 | 108.8 |
N4—C16—C17 | 114.34 (11) | C37—C36—C35 | 102.07 (14) |
C18—C16—C17 | 101.24 (11) | C37—C36—H36A | 111.4 |
N4—C16—C15 | 101.90 (11) | C35—C36—H36A | 111.4 |
C18—C16—C15 | 115.48 (11) | C37—C36—H36B | 111.4 |
C17—C16—C15 | 108.92 (11) | C35—C36—H36B | 111.4 |
O1—C17—N3 | 125.59 (13) | H36A—C36—H36B | 109.2 |
O1—C17—C16 | 126.48 (13) | C38—C37—C36 | 104.06 (14) |
N3—C17—C16 | 107.90 (11) | C38—C37—H37A | 110.9 |
C19—C18—C23 | 119.19 (14) | C36—C37—H37A | 110.9 |
C19—C18—C16 | 131.86 (13) | C38—C37—H37B | 110.9 |
C23—C18—C16 | 108.92 (12) | C36—C37—H37B | 110.9 |
C18—C19—C20 | 118.91 (15) | H37A—C37—H37B | 109.0 |
C18—C19—H19 | 120.5 | N4—C38—C37 | 104.17 (14) |
C20—C19—H19 | 120.5 | N4—C38—H38A | 110.9 |
C21—C20—C19 | 120.68 (15) | C37—C38—H38A | 110.9 |
C21—C20—H20 | 119.7 | N4—C38—H38B | 110.9 |
C19—C20—H20 | 119.7 | C37—C38—H38B | 110.9 |
C20—C21—C22 | 121.23 (15) | H38A—C38—H38B | 108.9 |
C20—C21—H21 | 119.4 | C7—N1—C1 | 114.98 (12) |
C22—C21—H21 | 119.4 | C8—N2—C6 | 114.67 (13) |
C23—C22—C21 | 117.45 (15) | C17—N3—C23 | 111.20 (12) |
C23—C22—H22 | 121.3 | C17—N3—C24 | 124.95 (13) |
C21—C22—H22 | 121.3 | C23—N3—C24 | 123.85 (12) |
C22—C23—C18 | 122.46 (14) | C16—N4—C38 | 118.33 (12) |
C22—C23—N3 | 127.28 (14) | C16—N4—C35 | 110.13 (11) |
C18—C23—N3 | 110.17 (12) | C38—N4—C35 | 109.36 (12) |
N3—C24—C25 | 113.45 (13) | C33—O2—C32 | 117.59 (15) |
N3—C24—H24A | 108.9 | H4A—O4—H4B | 100.3 (17) |
N1—C1—C2—C3 | 179.00 (15) | C21—C22—C23—C18 | 0.6 (2) |
C6—C1—C2—C3 | −1.5 (2) | C21—C22—C23—N3 | −175.82 (14) |
C1—C2—C3—C4 | 0.1 (3) | C19—C18—C23—C22 | −2.5 (2) |
C2—C3—C4—C5 | 1.0 (3) | C16—C18—C23—C22 | 179.33 (13) |
C3—C4—C5—C6 | −0.5 (3) | C19—C18—C23—N3 | 174.42 (12) |
C4—C5—C6—N2 | 177.39 (16) | C16—C18—C23—N3 | −3.72 (16) |
C4—C5—C6—C1 | −1.0 (2) | N3—C24—C25—C26 | 32.7 (2) |
N1—C1—C6—N2 | 3.1 (2) | N3—C24—C25—C30 | −147.57 (19) |
C2—C1—C6—N2 | −176.36 (14) | C30—C25—C26—C27 | 0.3 (3) |
N1—C1—C6—C5 | −178.56 (14) | C24—C25—C26—C27 | 180.0 (2) |
C2—C1—C6—C5 | 2.0 (2) | C25—C26—C27—C28 | 0.1 (4) |
N1—C7—C8—N2 | 3.8 (2) | C26—C27—C28—C29 | −0.4 (5) |
C15—C7—C8—N2 | −176.70 (13) | C27—C28—C29—C30 | 0.3 (5) |
N1—C7—C8—C9 | −174.74 (13) | C26—C25—C30—C29 | −0.3 (4) |
C15—C7—C8—C9 | 4.75 (16) | C24—C25—C30—C29 | 179.9 (2) |
N2—C8—C9—C10 | −0.4 (3) | C28—C29—C30—C25 | 0.1 (5) |
C7—C8—C9—C10 | 178.08 (15) | O3—C33—C34—C35 | 3.5 (2) |
N2—C8—C9—C14 | −178.92 (14) | O2—C33—C34—C35 | −175.81 (13) |
C7—C8—C9—C14 | −0.44 (16) | O3—C33—C34—C15 | −114.54 (19) |
C14—C9—C10—C11 | 0.6 (2) | O2—C33—C34—C15 | 66.11 (17) |
C8—C9—C10—C11 | −177.71 (15) | C7—C15—C34—C33 | −70.91 (16) |
C9—C10—C11—C12 | 0.4 (2) | C14—C15—C34—C33 | 43.49 (16) |
C10—C11—C12—C13 | −1.3 (2) | C16—C15—C34—C33 | 164.10 (12) |
C11—C12—C13—C14 | 1.0 (2) | C7—C15—C34—C35 | 165.19 (12) |
C12—C13—C14—C9 | 0.1 (2) | C14—C15—C34—C35 | −80.41 (14) |
C12—C13—C14—C15 | −177.74 (14) | C16—C15—C34—C35 | 40.20 (13) |
C10—C9—C14—C13 | −0.9 (2) | C33—C34—C35—N4 | −147.05 (12) |
C8—C9—C14—C13 | 177.77 (13) | C15—C34—C35—N4 | −22.83 (14) |
C10—C9—C14—C15 | 177.30 (13) | C33—C34—C35—C36 | 94.96 (17) |
C8—C9—C14—C15 | −4.04 (16) | C15—C34—C35—C36 | −140.83 (14) |
N1—C7—C15—C14 | 172.83 (13) | N4—C35—C36—C37 | 29.94 (18) |
C8—C7—C15—C14 | −6.64 (14) | C34—C35—C36—C37 | 147.83 (16) |
N1—C7—C15—C34 | −67.00 (18) | C35—C36—C37—C38 | −38.7 (2) |
C8—C7—C15—C34 | 113.53 (13) | C36—C37—C38—N4 | 32.9 (2) |
N1—C7—C15—C16 | 48.77 (19) | C8—C7—N1—C1 | −0.5 (2) |
C8—C7—C15—C16 | −130.70 (12) | C15—C7—N1—C1 | −179.95 (13) |
C13—C14—C15—C7 | −175.60 (14) | C2—C1—N1—C7 | 176.80 (14) |
C9—C14—C15—C7 | 6.46 (14) | C6—C1—N1—C7 | −2.6 (2) |
C13—C14—C15—C34 | 61.14 (19) | C7—C8—N2—C6 | −3.3 (2) |
C9—C14—C15—C34 | −116.80 (13) | C9—C8—N2—C6 | 175.00 (14) |
C13—C14—C15—C16 | −50.2 (2) | C5—C6—N2—C8 | −178.33 (14) |
C9—C14—C15—C16 | 131.82 (12) | C1—C6—N2—C8 | 0.0 (2) |
C7—C15—C16—N4 | −167.83 (11) | O1—C17—N3—C23 | −172.47 (13) |
C14—C15—C16—N4 | 75.26 (13) | C16—C17—N3—C23 | 5.77 (15) |
C34—C15—C16—N4 | −43.17 (12) | O1—C17—N3—C24 | 6.7 (2) |
C7—C15—C16—C18 | 66.38 (16) | C16—C17—N3—C24 | −175.06 (12) |
C14—C15—C16—C18 | −50.53 (16) | C22—C23—N3—C17 | 175.30 (14) |
C34—C15—C16—C18 | −168.96 (11) | C18—C23—N3—C17 | −1.47 (16) |
C7—C15—C16—C17 | −46.67 (15) | C22—C23—N3—C24 | −3.9 (2) |
C14—C15—C16—C17 | −163.58 (11) | C18—C23—N3—C24 | 179.36 (13) |
C34—C15—C16—C17 | 77.99 (12) | C25—C24—N3—C17 | −115.58 (16) |
N4—C16—C17—O1 | 46.14 (19) | C25—C24—N3—C23 | 63.48 (19) |
C18—C16—C17—O1 | 170.79 (14) | C18—C16—N4—C38 | −76.15 (16) |
C15—C16—C17—O1 | −67.08 (17) | C17—C16—N4—C38 | 40.64 (18) |
N4—C16—C17—N3 | −132.09 (12) | C15—C16—N4—C38 | 157.97 (13) |
C18—C16—C17—N3 | −7.43 (14) | C18—C16—N4—C35 | 157.07 (12) |
C15—C16—C17—N3 | 114.69 (12) | C17—C16—N4—C35 | −86.13 (14) |
N4—C16—C18—C19 | −47.3 (2) | C15—C16—N4—C35 | 31.19 (14) |
C17—C16—C18—C19 | −171.24 (15) | C37—C38—N4—C16 | −141.24 (15) |
C15—C16—C18—C19 | 71.31 (19) | C37—C38—N4—C35 | −14.10 (18) |
N4—C16—C18—C23 | 130.56 (13) | C36—C35—N4—C16 | 121.53 (14) |
C17—C16—C18—C23 | 6.58 (14) | C34—C35—N4—C16 | −5.40 (15) |
C15—C16—C18—C23 | −110.87 (13) | C36—C35—N4—C38 | −10.11 (17) |
C23—C18—C19—C20 | 2.3 (2) | C34—C35—N4—C38 | −137.04 (13) |
C16—C18—C19—C20 | 179.94 (14) | O3—C33—O2—C32 | −0.2 (3) |
C18—C19—C20—C21 | −0.2 (2) | C34—C33—O2—C32 | 179.15 (16) |
C19—C20—C21—C22 | −1.7 (2) | C31—C32—O2—C33 | 88.0 (2) |
C20—C21—C22—C23 | 1.6 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4A···N2 | 0.99 (2) | 2.03 (2) | 2.996 (2) | 164 (2) |
O4—H4B···O1i | 0.99 (2) | 2.31 (2) | 3.222 (2) | 154 (2) |
C2—H2···O1ii | 0.93 | 2.50 | 3.393 (2) | 162 |
C24—H24A···O4iii | 0.97 | 2.56 | 3.495 (3) | 163 |
Symmetry codes: (i) x+1, y, z; (ii) −x, −y+1, −z+2; (iii) −x+1, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C38H32N4O3·H2O |
Mr | 610.69 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 11.0527 (3), 11.5834 (3), 12.2015 (3) |
α, β, γ (°) | 97.370 (1), 92.037 (1), 96.810 (1) |
V (Å3) | 1536.25 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.25 × 0.22 × 0.19 |
Data collection | |
Diffractometer | Bruker APEXII CCD area detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2008) |
Tmin, Tmax | 0.979, 0.984 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21165, 5410, 4751 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.114, 1.02 |
No. of reflections | 5410 |
No. of parameters | 422 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.27, −0.31 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4A···N2 | 0.994 (18) | 2.027 (17) | 2.996 (2) | 164 (2) |
O4—H4B···O1i | 0.99 (2) | 2.31 (2) | 3.222 (2) | 153.6 (18) |
C2—H2···O1ii | 0.93 | 2.50 | 3.393 (2) | 162 |
C24—H24A···O4iii | 0.97 | 2.56 | 3.495 (3) | 163 |
Symmetry codes: (i) x+1, y, z; (ii) −x, −y+1, −z+2; (iii) −x+1, −y+1, −z+2. |
Acknowledgements
The authors thank the TBI X-ray facility, CAS in Crystallography and BioPhysics, University of Madras, Chennai, India, for the data collection.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Spiro compounds have received considerable interest due to their highly biological properties (Pradhan et al., 2006); Thus more and more novel spiroheterocycle compounds have been prepared and characterized (Saeedi et al., 2010); Dandia et al., 2011). In addition , quinoxaline derivatives also showed various biological activites (He et al., 2003).
Pyrrolidine derivatives are found to have anticonvulsant, antimicrobial and antifungal activities against various pathogens (Amal Raj et al., 2003). Quinoxaline derivatives shown antibacterial, antiviral and anticancer properties (Zarranz et al., 2003). As spiro pyrrolidine compounds are of great medicinal properties, we have undertaken the three dimensional structure of the title compound. In view of these importance and continuation of our work on the crystal structure analyis of pyrrolidine and quinoxaline derivatives, the crystal structure of the title compound has been carried out and the results are presented here.
X-Ray analysis confirms the molecular structure and atom connectivity of the compound as illustrated in Fig. 1. The quinoxaline-indene systems (C1-C15/N1-N2) and pyrrolizine system (C15-C16/C34-C38/N4), are essentially planar, with maximum deviations from mean plane of -0.162 Å for C3 atom and -0.563 Å for C36 atom, respectively.
The pyrrolizine ring (C15-C16/C34-C38/N4) forms a dihedral angles of 88.53 (5) and 89.95 (6)° with quinoxaline-indene systems and indole ring (C16-C23/N3) respectively. This clearly shows that the quinoxaline-indene ring system and indole rings are almost perpendicular to the pyrrolizine ring. The central pyrrolidine ring (C15-C16/C34-C35/N4) is enveloped on C15 with the puckering parameters of q2 = 0.4478 (2) Å, ϕ = 246.90 (2)° (Cremer & Pople, 1975). The pyrrolidine (C16-C18/C23/N3) of indole ring adopts envelope conformation on C16 with the puckering parameters of q2 = 0.0729 (2) Å, ϕ = 243.08 (1)°. The five membered ring (C35-C38/N4) attached with the central pyrolidine ring adopts twisted conformation on C36-C37 with the puckering parameters of q2 = 0.3767 (2) Å, ϕ = 92.96 (3)°.
In the crystal intra and intermolcular O-H···O hydrogen bonds between water molecules and pyrrolizine fragment N and carbonyl group O atoms of organic compound together with C-H···O interactions result in one-dimensional supramolecular structure.