organic compounds
Bis(2,3-dimethoxy-10-oxostrychnidinium) phthalate nonahydrate
aDepartment of Physics, Presidency College, Chennai 600 005, India, and bDepartment of Physics & Nano Technology, SRM University, SRM Nagar, Kattankulathur, Kancheepuram Dist., Chennai 603 203, Tamil Nadu, India
*Correspondence e-mail: phdguna@gmail.com, phdguna@gmail.com
The 23H27N2O4+·C8H4O42−·9H2O, contains a cation, an anionon a twofold axis and four and half molecules of water, one of which is located on the twofold axis. In the cation, both fused pyrrolidine rings exhibit twisted conformations, while the piperidine rings adopt screw–boat and boat conformations. In the crystal, the components are linked by N—H⋯O and O—H⋯O hydrogen bonds. The brucinium cations form typical undulating head-to-tail ribbon structuresalong the a-axis direction, which associate with the carboxy phthalate and the water molecules.
of the title compound 2CRelated literature
For general background to brucine derivatives, see: Smith et al. (2006) and for related structures, see: Smith et al. (2005, 2006).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S160053681301204X/rk2399sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681301204X/rk2399Isup2.hkl
The title compound was obtained by dissolving brucine (0.01 mol) in ethanol–water mixture of 50 ml and potassium hydrogen phthalate (0.01 mol) in 10 ml of water. The resulting solution mixed together and stirred well for 1 h. White precipitate has formed and further recrystalized in the mixture of ethanol–water, filtered off, and then allowed to evaporate at room temperature resulting in blocks of crystals within a week.
The C and N bounded H atoms were positioned geometrically and refined using riding model with C—H = 0.93Å and Uiso(H) = 1.2Ueq(C) for aromatic H, C—H = 0.98Å and Uiso(H) = 1.2Ueq(C) for methine H, C—H = 0.97Å and Uiso(H) = 1.2Ueq(C) for methylene H, C—H = 0.96Å and Uiso(H) = 1.5Ueq(C) for methyl H, N—H = 0.91Å and Uiso(H) = 1.5Ueq(N) for amino H. The water H atoms were located from difference Fourier map and refined with using DFIX instruction - O—H = 0.82Å and Uiso(H) = 1.5Ueq(O).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The molecular structure of title compound with the atom labels. Displacement ellipsoids are drawn at 30% probability level. H atoms are presented as a small spheres of arbitrary radius. |
2C23H27N2O4+·C8H4O42−·9H2O | F(000) = 1192 |
Mr = 1117.19 | Dx = 1.405 Mg m−3 |
Monoclinic, C2 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C 2y | Cell parameters from 5046 reflections |
a = 13.939 (5) Å | θ = 2.6–26.2° |
b = 12.370 (5) Å | µ = 0.11 mm−1 |
c = 15.321 (5) Å | T = 295 K |
β = 90.646 (5)° | Block, colourless |
V = 2641.6 (17) Å3 | 0.35 × 0.30 × 0.20 mm |
Z = 2 |
Bruker APEXII CCD diffractometer | 5094 independent reflections |
Radiation source: fine–focus sealed tube | 3854 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.038 |
Detector resolution: 0 pixels mm-1 | θmax = 26.2°, θmin = 2.6° |
ω– and ϕ–scans | h = −17→16 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | k = −14→15 |
Tmin = 0.963, Tmax = 0.979 | l = −19→18 |
12452 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.049 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.125 | w = 1/[σ2(Fo2) + (0.0613P)2 + 0.2749P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
5094 reflections | Δρmax = 0.25 e Å−3 |
385 parameters | Δρmin = −0.22 e Å−3 |
16 restraints | Absolute structure: Flack (1983), 8565 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0 (0) |
2C23H27N2O4+·C8H4O42−·9H2O | V = 2641.6 (17) Å3 |
Mr = 1117.19 | Z = 2 |
Monoclinic, C2 | Mo Kα radiation |
a = 13.939 (5) Å | µ = 0.11 mm−1 |
b = 12.370 (5) Å | T = 295 K |
c = 15.321 (5) Å | 0.35 × 0.30 × 0.20 mm |
β = 90.646 (5)° |
Bruker APEXII CCD diffractometer | 5094 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3854 reflections with I > 2σ(I) |
Tmin = 0.963, Tmax = 0.979 | Rint = 0.038 |
12452 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.125 | Δρmax = 0.25 e Å−3 |
S = 1.05 | Δρmin = −0.22 e Å−3 |
5094 reflections | Absolute structure: Flack (1983), 8565 Friedel pairs |
385 parameters | Absolute structure parameter: 0 (0) |
16 restraints |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R–factor wR and goodness of fit S are based on F2, conventional R–factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R–factors(gt) etc. and is not relevant to the choice of reflections for refinement. R–factors based on F2 are statistically about twice as large as those based on F, and R–factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.4573 (3) | 0.4377 (3) | 0.6912 (2) | 0.0557 (9) | |
H1A | 0.4806 | 0.4845 | 0.7367 | 0.084* | |
H1B | 0.5081 | 0.3909 | 0.6727 | 0.084* | |
H1C | 0.4052 | 0.3950 | 0.7128 | 0.084* | |
C2 | 0.3724 (3) | 0.6817 (3) | 0.4106 (2) | 0.0599 (10) | |
H2A | 0.3867 | 0.7556 | 0.4250 | 0.090* | |
H2B | 0.3083 | 0.6769 | 0.3874 | 0.090* | |
H2C | 0.4169 | 0.6564 | 0.3678 | 0.090* | |
C3 | 0.36214 (19) | 0.5095 (2) | 0.47760 (18) | 0.0345 (6) | |
C4 | 0.31895 (19) | 0.4632 (2) | 0.40565 (17) | 0.0334 (6) | |
H4 | 0.2979 | 0.5060 | 0.3593 | 0.040* | |
C5 | 0.30711 (18) | 0.3514 (2) | 0.40293 (16) | 0.0308 (6) | |
C6 | 0.33922 (18) | 0.2877 (2) | 0.47136 (16) | 0.0306 (6) | |
C7 | 0.37904 (18) | 0.3340 (3) | 0.54655 (18) | 0.0344 (7) | |
H7 | 0.3984 | 0.2912 | 0.5934 | 0.041* | |
C8 | 0.38888 (19) | 0.4445 (3) | 0.54950 (17) | 0.0354 (7) | |
C9 | 0.37303 (18) | 0.0925 (3) | 0.48887 (17) | 0.0353 (7) | |
C10 | 0.3762 (2) | −0.0096 (3) | 0.43528 (19) | 0.0389 (7) | |
H10A | 0.3199 | −0.0520 | 0.4493 | 0.047* | |
H10B | 0.4317 | −0.0508 | 0.4546 | 0.047* | |
C11 | 0.3806 (2) | −0.0001 (3) | 0.33534 (19) | 0.0410 (7) | |
H11 | 0.4427 | −0.0271 | 0.3154 | 0.049* | |
C12 | 0.3027 (3) | −0.0866 (3) | 0.2121 (2) | 0.0615 (10) | |
H12A | 0.2765 | −0.1576 | 0.1995 | 0.074* | |
H12B | 0.3672 | −0.0837 | 0.1890 | 0.074* | |
C13 | 0.2424 (3) | −0.0029 (3) | 0.1685 (2) | 0.0512 (9) | |
H13 | 0.1863 | −0.0247 | 0.1403 | 0.061* | |
C14 | 0.2645 (2) | 0.1004 (3) | 0.16783 (18) | 0.0437 (7) | |
C15 | 0.3573 (2) | 0.1421 (3) | 0.20946 (18) | 0.0413 (7) | |
H15 | 0.4118 | 0.1105 | 0.1786 | 0.050* | |
C16 | 0.36884 (19) | 0.1182 (3) | 0.30714 (17) | 0.0349 (6) | |
H16 | 0.4278 | 0.1551 | 0.3259 | 0.042* | |
C17 | 0.28898 (19) | 0.1669 (2) | 0.36045 (16) | 0.0317 (6) | |
H17 | 0.2336 | 0.1181 | 0.3599 | 0.038* | |
C18 | 0.25598 (19) | 0.2826 (2) | 0.33607 (16) | 0.0311 (6) | |
C19 | 0.2720 (2) | 0.3128 (3) | 0.24005 (17) | 0.0379 (7) | |
H19 | 0.2755 | 0.3917 | 0.2353 | 0.046* | |
N3 | 0.18192 (18) | 0.2734 (2) | 0.19153 (15) | 0.0424 (6) | |
H3 | 0.1573 | 0.3305 | 0.1612 | 0.051* | |
C21 | 0.2013 (2) | 0.1850 (3) | 0.1277 (2) | 0.0497 (8) | |
H21A | 0.2321 | 0.2149 | 0.0767 | 0.060* | |
H21B | 0.1411 | 0.1525 | 0.1091 | 0.060* | |
C22 | 0.3610 (2) | 0.2643 (3) | 0.19939 (18) | 0.0432 (7) | |
H22A | 0.4180 | 0.2926 | 0.2281 | 0.052* | |
H22B | 0.3635 | 0.2833 | 0.1380 | 0.052* | |
C23 | 0.1456 (2) | 0.2932 (3) | 0.34231 (19) | 0.0375 (7) | |
H23A | 0.1216 | 0.2552 | 0.3929 | 0.045* | |
H23B | 0.1264 | 0.3685 | 0.3455 | 0.045* | |
C24 | 0.5857 (2) | 0.9656 (3) | 0.0600 (2) | 0.0449 (8) | |
C25 | 0.5393 (2) | 1.0673 (3) | 0.02828 (18) | 0.0390 (7) | |
C26 | 0.5779 (2) | 1.1653 (3) | 0.0557 (2) | 0.0507 (8) | |
H26 | 0.6305 | 1.1656 | 0.0936 | 0.061* | |
C27 | 0.5394 (3) | 1.2624 (3) | 0.0275 (2) | 0.0566 (9) | |
H27 | 0.5666 | 1.3274 | 0.0455 | 0.068* | |
N2 | 0.32705 (15) | 0.1775 (2) | 0.45108 (13) | 0.0315 (5) | |
C20 | 0.1103 (2) | 0.2419 (3) | 0.2591 (2) | 0.0427 (7) | |
H20A | 0.1073 | 0.1640 | 0.2651 | 0.051* | |
H20B | 0.0469 | 0.2687 | 0.2435 | 0.051* | |
O1 | 0.42494 (14) | 0.50057 (18) | 0.61970 (13) | 0.0438 (5) | |
O2 | 0.38030 (15) | 0.61733 (18) | 0.48644 (14) | 0.0448 (5) | |
O3 | 0.40961 (14) | 0.09733 (18) | 0.56238 (12) | 0.0441 (5) | |
O4 | 0.30645 (17) | −0.07057 (18) | 0.30469 (13) | 0.0496 (6) | |
O5 | 0.5988 (2) | 0.9574 (2) | 0.14108 (16) | 0.0671 (7) | |
O6 | 0.6140 (2) | 0.8986 (2) | 0.00662 (17) | 0.0745 (8) | |
O7 | 0.3608 (3) | 0.1234 (3) | 0.73624 (18) | 0.0916 (10) | |
O8 | 0.1780 (3) | 0.0956 (3) | 0.8059 (2) | 0.1011 (11) | |
O9 | 0.0584 (3) | 0.2296 (3) | 0.8982 (2) | 0.0998 (11) | |
O10 | 0.1784 (2) | 0.9654 (4) | 0.9528 (2) | 0.1013 (11) | |
O11 | 0.0000 | 1.0515 (4) | 1.0000 | 0.138 (2) | |
H7A | 0.368 (5) | 0.125 (6) | 0.6833 (7) | 0.208* | |
H7B | 0.385 (5) | 0.068 (4) | 0.756 (4) | 0.208* | |
H9A | 0.086 (4) | 0.275 (4) | 0.928 (4) | 0.208* | |
H8B | 0.230 (2) | 0.115 (5) | 0.788 (4) | 0.208* | |
H8A | 0.156 (5) | 0.143 (3) | 0.838 (3) | 0.208* | |
H9B | 0.044 (6) | 0.178 (4) | 0.929 (4) | 0.208* | |
H10C | 0.2360 (12) | 0.966 (8) | 0.965 (5) | 0.208* | |
H10D | 0.170 (5) | 0.990 (6) | 0.904 (2) | 0.208* | |
H11A | 0.0337 (18) | 1.0130 (4) | 0.9694 (17) | 0.208* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.065 (2) | 0.060 (2) | 0.0419 (18) | 0.0067 (19) | −0.0164 (15) | −0.0125 (16) |
C2 | 0.089 (3) | 0.0374 (19) | 0.053 (2) | −0.006 (2) | 0.0058 (19) | −0.0007 (16) |
C3 | 0.0358 (14) | 0.0308 (16) | 0.0371 (15) | 0.0028 (13) | 0.0030 (12) | −0.0071 (12) |
C4 | 0.0394 (15) | 0.0308 (17) | 0.0299 (14) | 0.0006 (13) | 0.0000 (11) | 0.0018 (11) |
C5 | 0.0330 (13) | 0.0306 (15) | 0.0287 (14) | 0.0016 (13) | 0.0004 (11) | −0.0013 (11) |
C6 | 0.0313 (13) | 0.0328 (17) | 0.0277 (13) | 0.0010 (13) | 0.0040 (11) | 0.0015 (12) |
C7 | 0.0354 (14) | 0.0371 (18) | 0.0307 (15) | 0.0050 (13) | −0.0027 (11) | −0.0011 (11) |
C8 | 0.0314 (14) | 0.0403 (18) | 0.0343 (15) | 0.0024 (13) | −0.0007 (11) | −0.0090 (13) |
C9 | 0.0310 (14) | 0.0389 (18) | 0.0361 (15) | −0.0002 (14) | 0.0016 (11) | 0.0023 (13) |
C10 | 0.0379 (15) | 0.0357 (18) | 0.0431 (16) | 0.0052 (14) | −0.0037 (13) | 0.0009 (13) |
C11 | 0.0400 (15) | 0.0428 (18) | 0.0402 (16) | 0.0064 (15) | 0.0046 (13) | −0.0064 (14) |
C12 | 0.093 (3) | 0.041 (2) | 0.050 (2) | 0.003 (2) | −0.0130 (18) | −0.0142 (16) |
C13 | 0.066 (2) | 0.049 (2) | 0.0383 (17) | 0.0003 (18) | −0.0092 (15) | −0.0167 (15) |
C14 | 0.0534 (18) | 0.048 (2) | 0.0301 (15) | −0.0033 (16) | 0.0000 (12) | −0.0068 (13) |
C15 | 0.0461 (16) | 0.049 (2) | 0.0291 (15) | −0.0006 (15) | 0.0088 (12) | −0.0031 (13) |
C16 | 0.0349 (14) | 0.0387 (17) | 0.0310 (14) | −0.0025 (14) | 0.0003 (11) | −0.0061 (12) |
C17 | 0.0343 (13) | 0.0313 (16) | 0.0296 (14) | −0.0032 (13) | −0.0020 (11) | −0.0010 (11) |
C18 | 0.0371 (14) | 0.0296 (16) | 0.0266 (13) | 0.0032 (13) | 0.0018 (10) | 0.0024 (11) |
C19 | 0.0493 (16) | 0.0354 (16) | 0.0291 (14) | −0.0076 (14) | −0.0004 (12) | 0.0024 (12) |
N3 | 0.0557 (15) | 0.0387 (15) | 0.0325 (12) | −0.0011 (13) | −0.0103 (11) | 0.0007 (11) |
C21 | 0.063 (2) | 0.050 (2) | 0.0353 (16) | −0.0042 (17) | −0.0089 (14) | −0.0039 (14) |
C22 | 0.0520 (17) | 0.050 (2) | 0.0275 (14) | −0.0095 (16) | 0.0071 (13) | 0.0009 (13) |
C23 | 0.0403 (15) | 0.0302 (16) | 0.0419 (16) | 0.0044 (14) | −0.0023 (12) | 0.0040 (13) |
C24 | 0.0468 (18) | 0.043 (2) | 0.0445 (18) | −0.0048 (16) | −0.0063 (14) | 0.0070 (15) |
C25 | 0.0453 (15) | 0.0420 (18) | 0.0296 (14) | −0.0038 (15) | 0.0002 (11) | 0.0031 (13) |
C26 | 0.0595 (19) | 0.053 (2) | 0.0395 (17) | −0.0143 (18) | −0.0048 (14) | 0.0007 (15) |
C27 | 0.079 (2) | 0.043 (2) | 0.0478 (19) | −0.013 (2) | 0.0030 (16) | −0.0017 (15) |
N2 | 0.0364 (12) | 0.0309 (13) | 0.0271 (11) | 0.0016 (11) | −0.0013 (9) | −0.0001 (9) |
C20 | 0.0411 (16) | 0.0421 (19) | 0.0449 (17) | −0.0026 (15) | −0.0062 (13) | 0.0058 (13) |
O1 | 0.0488 (11) | 0.0422 (12) | 0.0403 (11) | 0.0083 (11) | −0.0124 (9) | −0.0118 (9) |
O2 | 0.0557 (13) | 0.0271 (12) | 0.0516 (13) | −0.0005 (10) | −0.0033 (10) | −0.0082 (9) |
O3 | 0.0534 (12) | 0.0436 (13) | 0.0350 (11) | 0.0076 (11) | −0.0064 (9) | 0.0019 (9) |
O4 | 0.0709 (15) | 0.0335 (12) | 0.0441 (12) | −0.0035 (11) | −0.0092 (10) | −0.0074 (9) |
O5 | 0.0979 (19) | 0.0529 (15) | 0.0500 (14) | 0.0047 (15) | −0.0229 (13) | 0.0063 (12) |
O6 | 0.100 (2) | 0.0614 (17) | 0.0619 (16) | 0.0274 (16) | 0.0006 (14) | −0.0066 (14) |
O7 | 0.123 (2) | 0.107 (3) | 0.0452 (15) | 0.033 (2) | 0.0112 (16) | 0.0090 (15) |
O8 | 0.130 (3) | 0.090 (2) | 0.084 (2) | 0.011 (2) | 0.0156 (19) | −0.005 (2) |
O9 | 0.111 (3) | 0.095 (3) | 0.094 (2) | 0.023 (2) | −0.007 (2) | −0.0158 (19) |
O10 | 0.096 (2) | 0.118 (3) | 0.090 (2) | −0.008 (2) | 0.0084 (18) | 0.009 (2) |
O11 | 0.139 (5) | 0.079 (4) | 0.199 (7) | 0.000 | 0.076 (4) | 0.000 |
C1—O1 | 1.413 (4) | C16—C17 | 1.513 (4) |
C1—H1A | 0.9600 | C16—H16 | 0.9800 |
C1—H1B | 0.9600 | C17—N2 | 1.487 (3) |
C1—H1C | 0.9600 | C17—C18 | 1.548 (4) |
C2—O2 | 1.412 (4) | C17—H17 | 0.9800 |
C2—H2A | 0.9600 | C18—C19 | 1.537 (4) |
C2—H2B | 0.9600 | C18—C23 | 1.548 (4) |
C2—H2C | 0.9600 | C19—C22 | 1.517 (4) |
C3—O2 | 1.365 (4) | C19—N3 | 1.532 (4) |
C3—C4 | 1.375 (4) | C19—H19 | 0.9800 |
C3—C8 | 1.410 (4) | N3—C21 | 1.494 (4) |
C4—C5 | 1.393 (4) | N3—C20 | 1.498 (4) |
C4—H4 | 0.9300 | N3—H3 | 0.9100 |
C5—C6 | 1.382 (4) | C21—H21A | 0.9700 |
C5—C18 | 1.505 (4) | C21—H21B | 0.9700 |
C6—C7 | 1.396 (4) | C22—H22A | 0.9700 |
C6—N2 | 1.408 (4) | C22—H22B | 0.9700 |
C7—C8 | 1.374 (4) | C23—C20 | 1.502 (4) |
C7—H7 | 0.9300 | C23—H23A | 0.9700 |
C8—O1 | 1.371 (3) | C23—H23B | 0.9700 |
C9—O3 | 1.233 (3) | C24—O6 | 1.233 (4) |
C9—N2 | 1.358 (4) | C24—O5 | 1.258 (4) |
C9—C10 | 1.507 (4) | C24—C25 | 1.493 (4) |
C10—C11 | 1.538 (4) | C25—C25i | 1.388 (6) |
C10—H10A | 0.9700 | C25—C26 | 1.390 (4) |
C10—H10B | 0.9700 | C26—C27 | 1.383 (5) |
C11—O4 | 1.427 (4) | C26—H26 | 0.9300 |
C11—C16 | 1.535 (4) | C27—C27i | 1.376 (7) |
C11—H11 | 0.9800 | C27—H27 | 0.9300 |
C12—O4 | 1.433 (4) | C20—H20A | 0.9700 |
C12—C13 | 1.487 (5) | C20—H20B | 0.9700 |
C12—H12A | 0.9700 | O7—H7A | 0.8201 (11) |
C12—H12B | 0.9700 | O7—H7B | 0.8201 (11) |
C13—C14 | 1.313 (5) | O8—H8B | 0.8201 (11) |
C13—H13 | 0.9300 | O8—H8A | 0.8202 (11) |
C14—C21 | 1.496 (5) | O9—H9A | 0.8201 (11) |
C14—C15 | 1.526 (4) | O9—H9B | 0.8201 (11) |
C15—C22 | 1.520 (4) | O10—H10C | 0.8201 (15) |
C15—C16 | 1.532 (4) | O10—H10D | 0.8201 (11) |
C15—H15 | 0.9800 | O11—H11A | 0.8200 (11) |
O1—C1—H1A | 109.5 | N2—C17—C18 | 104.2 (2) |
O1—C1—H1B | 109.5 | C16—C17—C18 | 117.1 (2) |
H1A—C1—H1B | 109.5 | N2—C17—H17 | 109.6 |
O1—C1—H1C | 109.5 | C16—C17—H17 | 109.6 |
H1A—C1—H1C | 109.5 | C18—C17—H17 | 109.6 |
H1B—C1—H1C | 109.5 | C5—C18—C19 | 116.2 (2) |
O2—C2—H2A | 109.5 | C5—C18—C17 | 102.8 (2) |
O2—C2—H2B | 109.5 | C19—C18—C17 | 114.2 (2) |
H2A—C2—H2B | 109.5 | C5—C18—C23 | 111.9 (2) |
O2—C2—H2C | 109.5 | C19—C18—C23 | 101.2 (2) |
H2A—C2—H2C | 109.5 | C17—C18—C23 | 110.9 (2) |
H2B—C2—H2C | 109.5 | C22—C19—N3 | 110.2 (2) |
O2—C3—C4 | 124.5 (3) | C22—C19—C18 | 115.2 (2) |
O2—C3—C8 | 115.6 (2) | N3—C19—C18 | 105.1 (2) |
C4—C3—C8 | 119.9 (3) | C22—C19—H19 | 108.7 |
C3—C4—C5 | 119.2 (3) | N3—C19—H19 | 108.7 |
C3—C4—H4 | 120.4 | C18—C19—H19 | 108.7 |
C5—C4—H4 | 120.4 | C21—N3—C20 | 112.9 (2) |
C6—C5—C4 | 120.4 (2) | C21—N3—C19 | 113.4 (2) |
C6—C5—C18 | 109.9 (2) | C20—N3—C19 | 107.3 (2) |
C4—C5—C18 | 129.6 (2) | C21—N3—H3 | 107.7 |
C5—C6—C7 | 120.9 (3) | C20—N3—H3 | 107.7 |
C5—C6—N2 | 110.4 (2) | C19—N3—H3 | 107.7 |
C7—C6—N2 | 128.7 (2) | N3—C21—C14 | 110.7 (2) |
C8—C7—C6 | 118.3 (3) | N3—C21—H21A | 109.5 |
C8—C7—H7 | 120.9 | C14—C21—H21A | 109.5 |
C6—C7—H7 | 120.9 | N3—C21—H21B | 109.5 |
O1—C8—C7 | 124.4 (3) | C14—C21—H21B | 109.5 |
O1—C8—C3 | 114.6 (3) | H21A—C21—H21B | 108.1 |
C7—C8—C3 | 121.0 (2) | C19—C22—C15 | 108.8 (2) |
O3—C9—N2 | 122.7 (3) | C19—C22—H22A | 109.9 |
O3—C9—C10 | 121.6 (3) | C15—C22—H22A | 109.9 |
N2—C9—C10 | 115.7 (2) | C19—C22—H22B | 109.9 |
C9—C10—C11 | 118.7 (3) | C15—C22—H22B | 109.9 |
C9—C10—H10A | 107.6 | H22A—C22—H22B | 108.3 |
C11—C10—H10A | 107.6 | C20—C23—C18 | 103.2 (2) |
C9—C10—H10B | 107.6 | C20—C23—H23A | 111.1 |
C11—C10—H10B | 107.6 | C18—C23—H23A | 111.1 |
H10A—C10—H10B | 107.1 | C20—C23—H23B | 111.1 |
O4—C11—C16 | 114.5 (2) | C18—C23—H23B | 111.1 |
O4—C11—C10 | 104.2 (2) | H23A—C23—H23B | 109.1 |
C16—C11—C10 | 110.3 (2) | O6—C24—O5 | 123.8 (3) |
O4—C11—H11 | 109.2 | O6—C24—C25 | 119.5 (3) |
C16—C11—H11 | 109.2 | O5—C24—C25 | 116.6 (3) |
C10—C11—H11 | 109.2 | C25i—C25—C26 | 119.28 (18) |
O4—C12—C13 | 111.2 (3) | C25i—C25—C24 | 122.60 (16) |
O4—C12—H12A | 109.4 | C26—C25—C24 | 118.1 (3) |
C13—C12—H12A | 109.4 | C27—C26—C25 | 121.0 (3) |
O4—C12—H12B | 109.4 | C27—C26—H26 | 119.5 |
C13—C12—H12B | 109.4 | C25—C26—H26 | 119.5 |
H12A—C12—H12B | 108.0 | C27i—C27—C26 | 119.7 (2) |
C14—C13—C12 | 123.3 (3) | C27i—C27—H27 | 120.1 |
C14—C13—H13 | 118.3 | C26—C27—H27 | 120.1 |
C12—C13—H13 | 118.3 | C9—N2—C6 | 126.9 (2) |
C13—C14—C21 | 123.1 (3) | C9—N2—C17 | 119.5 (2) |
C13—C14—C15 | 121.6 (3) | C6—N2—C17 | 109.4 (2) |
C21—C14—C15 | 115.3 (3) | N3—C20—C23 | 105.2 (2) |
C22—C15—C14 | 108.9 (3) | N3—C20—H20A | 110.7 |
C22—C15—C16 | 106.7 (2) | C23—C20—H20A | 110.7 |
C14—C15—C16 | 114.9 (2) | N3—C20—H20B | 110.7 |
C22—C15—H15 | 108.7 | C23—C20—H20B | 110.7 |
C14—C15—H15 | 108.7 | H20A—C20—H20B | 108.8 |
C16—C15—H15 | 108.7 | C8—O1—C1 | 116.2 (3) |
C17—C16—C15 | 112.4 (2) | C3—O2—C2 | 117.2 (2) |
C17—C16—C11 | 107.7 (2) | C11—O4—C12 | 115.4 (2) |
C15—C16—C11 | 118.0 (2) | H7A—O7—H7B | 108.96 (19) |
C17—C16—H16 | 106.0 | H8B—O8—H8A | 109.0 (2) |
C15—C16—H16 | 106.0 | H9A—O9—H9B | 108.96 (19) |
C11—C16—H16 | 106.0 | H10C—O10—H10D | 109.0 (2) |
N2—C17—C16 | 106.4 (2) | ||
O2—C3—C4—C5 | 177.8 (3) | C5—C18—C19—C22 | 85.2 (3) |
C8—C3—C4—C5 | −3.6 (4) | C17—C18—C19—C22 | −34.2 (3) |
C3—C4—C5—C6 | −0.6 (4) | C23—C18—C19—C22 | −153.4 (2) |
C3—C4—C5—C18 | 174.7 (2) | C5—C18—C19—N3 | −153.4 (2) |
C4—C5—C6—C7 | 3.7 (4) | C17—C18—C19—N3 | 87.2 (3) |
C18—C5—C6—C7 | −172.4 (2) | C23—C18—C19—N3 | −32.0 (3) |
C4—C5—C6—N2 | −175.0 (2) | C22—C19—N3—C21 | 9.6 (3) |
C18—C5—C6—N2 | 8.9 (3) | C18—C19—N3—C21 | −115.0 (3) |
C5—C6—C7—C8 | −2.4 (4) | C22—C19—N3—C20 | 134.9 (3) |
N2—C6—C7—C8 | 176.0 (2) | C18—C19—N3—C20 | 10.3 (3) |
C6—C7—C8—O1 | 178.6 (2) | C20—N3—C21—C14 | −76.0 (3) |
C6—C7—C8—C3 | −1.8 (4) | C19—N3—C21—C14 | 46.3 (3) |
O2—C3—C8—O1 | 3.1 (3) | C13—C14—C21—N3 | 126.8 (3) |
C4—C3—C8—O1 | −175.6 (2) | C15—C14—C21—N3 | −52.6 (3) |
O2—C3—C8—C7 | −176.4 (2) | N3—C19—C22—C15 | −62.8 (3) |
C4—C3—C8—C7 | 4.9 (4) | C18—C19—C22—C15 | 55.8 (3) |
O3—C9—C10—C11 | −148.1 (3) | C14—C15—C22—C19 | 56.7 (3) |
N2—C9—C10—C11 | 32.3 (4) | C16—C15—C22—C19 | −67.9 (3) |
C9—C10—C11—O4 | −130.1 (3) | C5—C18—C23—C20 | 166.8 (2) |
C9—C10—C11—C16 | −6.7 (4) | C19—C18—C23—C20 | 42.5 (3) |
O4—C12—C13—C14 | 64.8 (5) | C17—C18—C23—C20 | −79.0 (3) |
C12—C13—C14—C21 | −176.9 (3) | O6—C24—C25—C25i | 54.8 (5) |
C12—C13—C14—C15 | 2.4 (5) | O5—C24—C25—C25i | −129.6 (4) |
C13—C14—C15—C22 | −178.9 (3) | O6—C24—C25—C26 | −124.0 (4) |
C21—C14—C15—C22 | 0.4 (3) | O5—C24—C25—C26 | 51.5 (4) |
C13—C14—C15—C16 | −59.3 (4) | C25i—C25—C26—C27 | 0.0 (5) |
C21—C14—C15—C16 | 120.1 (3) | C24—C25—C26—C27 | 178.8 (3) |
C22—C15—C16—C17 | 61.3 (3) | C25—C26—C27—C27i | 1.1 (6) |
C14—C15—C16—C17 | −59.5 (3) | O3—C9—N2—C6 | 22.6 (4) |
C22—C15—C16—C11 | −172.4 (3) | C10—C9—N2—C6 | −157.8 (2) |
C14—C15—C16—C11 | 66.8 (3) | O3—C9—N2—C17 | 177.0 (2) |
O4—C11—C16—C17 | 73.9 (3) | C10—C9—N2—C17 | −3.4 (3) |
C10—C11—C16—C17 | −43.2 (3) | C5—C6—N2—C9 | 159.8 (2) |
O4—C11—C16—C15 | −54.6 (3) | C7—C6—N2—C9 | −18.7 (4) |
C10—C11—C16—C15 | −171.7 (2) | C5—C6—N2—C17 | 3.3 (3) |
C15—C16—C17—N2 | −157.6 (2) | C7—C6—N2—C17 | −175.2 (2) |
C11—C16—C17—N2 | 70.8 (3) | C16—C17—N2—C9 | −47.6 (3) |
C15—C16—C17—C18 | −41.6 (3) | C18—C17—N2—C9 | −172.0 (2) |
C11—C16—C17—C18 | −173.2 (2) | C16—C17—N2—C6 | 110.9 (2) |
C6—C5—C18—C19 | −142.0 (2) | C18—C17—N2—C6 | −13.5 (3) |
C4—C5—C18—C19 | 42.3 (4) | C21—N3—C20—C23 | 142.2 (2) |
C6—C5—C18—C17 | −16.6 (3) | C19—N3—C20—C23 | 16.6 (3) |
C4—C5—C18—C17 | 167.7 (3) | C18—C23—C20—N3 | −36.9 (3) |
C6—C5—C18—C23 | 102.5 (3) | C7—C8—O1—C1 | 2.8 (4) |
C4—C5—C18—C23 | −73.2 (3) | C3—C8—O1—C1 | −176.7 (3) |
N2—C17—C18—C5 | 17.5 (2) | C4—C3—O2—C2 | −13.5 (4) |
C16—C17—C18—C5 | −99.7 (2) | C8—C3—O2—C2 | 167.8 (3) |
N2—C17—C18—C19 | 144.3 (2) | C16—C11—O4—C12 | 66.5 (3) |
C16—C17—C18—C19 | 27.1 (3) | C10—C11—O4—C12 | −172.8 (2) |
N2—C17—C18—C23 | −102.2 (2) | C13—C12—O4—C11 | −88.0 (4) |
C16—C17—C18—C23 | 140.6 (2) |
Symmetry code: (i) −x+1, y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3···O5ii | 0.91 | 1.79 | 2.665 (4) | 159 |
O7—H7A···O3 | 0.82 (1) | 1.98 (2) | 2.776 (3) | 165 (7) |
O7—H7B···O5iii | 0.82 (1) | 2.10 (4) | 2.836 (4) | 149 (7) |
O9—H9A···O6iv | 0.82 (1) | 1.98 (2) | 2.775 (5) | 164 (6) |
O8—H8B···O7 | 0.82 (1) | 1.99 (2) | 2.794 (5) | 165 (6) |
O8—H8A···O9 | 0.82 (1) | 1.97 (3) | 2.753 (5) | 158 (7) |
O9—H9B···O11v | 0.82 (1) | 2.01 (1) | 2.824 (6) | 176 (8) |
O10—H10C···O6vi | 0.82 (1) | 2.29 (3) | 3.066 (5) | 159 (9) |
O10—H10D···O8vii | 0.82 (1) | 1.99 (3) | 2.767 (5) | 158 (8) |
O11—H11A···O10 | 0.82 (1) | 2.12 (2) | 2.808 (4) | 142 (3) |
Symmetry codes: (ii) x−1/2, y−1/2, z; (iii) −x+1, y−1, −z+1; (iv) x−1/2, y−1/2, z+1; (v) x, y−1, z; (vi) −x+1, y, −z+1; (vii) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | 2C23H27N2O4+·C8H4O42−·9H2O |
Mr | 1117.19 |
Crystal system, space group | Monoclinic, C2 |
Temperature (K) | 295 |
a, b, c (Å) | 13.939 (5), 12.370 (5), 15.321 (5) |
β (°) | 90.646 (5) |
V (Å3) | 2641.6 (17) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.35 × 0.30 × 0.20 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.963, 0.979 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12452, 5094, 3854 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.620 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.125, 1.05 |
No. of reflections | 5094 |
No. of parameters | 385 |
No. of restraints | 16 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.25, −0.22 |
Absolute structure | Flack (1983), 8565 Friedel pairs |
Absolute structure parameter | 0 (0) |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3···O5i | 0.91 | 1.79 | 2.665 (4) | 159.1 |
O7—H7A···O3 | 0.8201 (11) | 1.975 (19) | 2.776 (3) | 165 (7) |
O7—H7B···O5ii | 0.8201 (11) | 2.10 (4) | 2.836 (4) | 149 (7) |
O9—H9A···O6iii | 0.8201 (11) | 1.978 (19) | 2.775 (5) | 164 (6) |
O8—H8B···O7 | 0.8201 (11) | 1.993 (16) | 2.794 (5) | 165 (6) |
O8—H8A···O9 | 0.8202 (11) | 1.97 (3) | 2.753 (5) | 158 (7) |
O9—H9B···O11iv | 0.8201 (11) | 2.005 (7) | 2.824 (6) | 176 (8) |
O10—H10C···O6v | 0.8201 (15) | 2.29 (3) | 3.066 (5) | 159 (9) |
O10—H10D···O8vi | 0.8201 (11) | 1.99 (3) | 2.767 (5) | 158 (8) |
O11—H11A···O10 | 0.8200 (11) | 2.12 (2) | 2.808 (4) | 142 (3) |
Symmetry codes: (i) x−1/2, y−1/2, z; (ii) −x+1, y−1, −z+1; (iii) x−1/2, y−1/2, z+1; (iv) x, y−1, z; (v) −x+1, y, −z+1; (vi) x, y+1, z. |
References
Bruker (2004). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Sheldrick, G. M. (1996). SADABS, University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Smith, G., Wermuth, U. D., Healy, P. C., Young, D. J. & White, J. M. (2005). Acta Cryst. E61, o2646–o2648. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Smith, G., Wermuth, U. D., Young, D. J. & White, J. M. (2006). Acta Cryst. E62, o1553–o1555. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The strychnos alkaloids, strychnine and brucine have mostly been used to resolve enantiomorphic mixtures of chiral compounds, and the number of crystal structures of both salts and adducts of strychnine (Smith et al., 2006).
The geometric parameters of the title molecule (Fig. 1) agree well with reported similar structure (Smith et al., 2005; 2006). Both fused pyrrolidine rings exhibit twisted conformations, while the piperidine rings adopt screw–boat and boat conformations. In title compound anion placed in special position - twofold axis. One of water molecules placed on twofold axis too. Other four water molecules placed in common positons.
The molecular structure of the compound is stabilized by classical intermolecular N—H···O, O—H···O hydrogen bonds - look Table 1.