metal-organic compounds
Dichloridobis(pyridine-2-selenolato-κ2N,Se)tin(IV)
aBaku State University, Z. Khalilov Street 23, Baku AZ-1148, Azerbaijan, bR. E. Alekseev Nizhny Novgorod State Technical University, 24 Minin Street, Nizhny Novgorod 603950, Russian Federation, and cX-Ray Structural Centre, A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Street, B-334 Moscow 119991, Russian Federation
*Correspondence e-mail: isheydi02@gmail.com
The title compound, [SnCl2(C5H4NSe)2], is the product of a reaction of 2,2′-dipyridyl diselenide with tin tetrachloride. The molecule is located about a twofold rotation axis. The coordination environment of the SnIV atom is a distorted octahedron, with two bidentate 2-pyridineselenolate ligands inclined to each other at an angle of 83.96 (7)°. The two Sn—Cl and two Sn—N bonds are in cis configurations, while the two Sn—Se bonds of 2.5917 (3) Å are in a trans configuration, with an Se—Sn—Se angle of 157.988 (15)°. In the crystal, π–π interactions between the pyridine rings [centroid-to-centroid distance of 3.758 (3) Å] and weak intermolecular C—H⋯Cl hydrogen bonds link the molecules into chains along the c axis.
Related literature
For metal complexes with 2,2′-dipyridyl dichalcogenides, see: Kadooka et al. (1976a,b); Cheng et al. (1996); Kienitz et al. (1996); Bell et al. (2000); Kita et al. (2001); Kedarnath et al. (2009). For syntheses and structures of related tin(IV) compounds, see: Masaki & Matsunami (1976); Masaki et al. (1978); Labisbal et al. (1993); Chopra et al. (1996); Ismaylova et al. (2012).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536813014657/cv5413sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536813014657/cv5413Isup2.hkl
A solution of SnCl4 (0.042 g, 0.16 mmol) in CH2Cl2 (25 ml) was added to a solution of 2,2'-dipyridyl diselenide (0.10 g, 0.32 mmol) in CH2Cl2 (25 ml) with stirring at room temperature. After 48 h, the reaction mixture was concentrated in vacuo to a volume of about 15–20 ml, and the powder of compound I was separated by filtration. The solid was re-crystallized from CH2Cl2 to give I as yellow crystals. Yield is 25%. m.p. = 456–458 K. 1H NMR (DMSO-d6, 300 MHz, 302 K): δ = 8.53 (d, 2H, H6, J = 4.4 Hz), 7.80 (t, 2H, H4, J = 7.3 Hz), 7.64 (d, 2H, H3, J = 7.3 Hz), 7.35 (dd, 2H, H5, J = 7.3 Hz, J = 4.4 Hz). Analysis, calculated for C10H8Cl2N2Se2Sn: C 23.72, H 1.57, N 5.51%; found: C 23.84, H 1.60, N 5.56%.
The H atoms were placed in calculated positions with C—H = 0.95 Å and refined in the riding model with fixed isotropic displacement parameters [Uiso(H) = 1.2Ueq(C)].
The coordination chemistry of 2,2'-dipyridyl dichalcogenides to metal ions is a topic of current research interest owing to the application of these complexes as potential precursors for the generation of semiconducting materials (Kadooka et al., 1976a,b; Cheng et al., 1996; Kienitz et al., 1996; Bell et al., 2000; Kita et al., 2001; Kedarnath et al., 2009).
This article describes dichloridobis(pyridine-2-selenolato-k2N,Se)-tin(IV), C10H8Cl2N2Se2Sn (I), which was obtained by the reaction of 2,2'-dipyridyl diselenide with tin tetrachloride (Fig. 1). Compound I is isostructural with the monoclinic modification of the related thio-analogue reported by us very recently (Ismaylova et al., 2012). For the synthesis and structure of the triclinic modification of this thio-analogue, see: Masaki & Matsunami (1976) and Masaki et al. (1978).
The molecule of I possesses overall intrinsic C2 symmetry and occupies a special position on the twofold axis. The Sn atom adopts a distorted octahedral geometry, with the two bidentate 2-pyridineselenolate ligands forming two planar four-membered chelate rings (Fig. 2). The two Sn—Cl, two Sn—N and two Sn—Se bonds are in cis, cis and trans configurations, respectively. The lengths of the two covalent Sn—Se bonds [2.5917 (3) Å] are in good accordance with those in the previously studied analogous octahedral tin(IV) complexes (Labisbal et al., 1993; Chopra et al., 1996).
In the crystal, π–π interactions between the pyridine rings [centroid-to-centroid distance of 3.758 (3) Å] and weak intermolecular C4—H4···Cl1 hydrogen bonds (Fig. 3, Table 1) link the molecules of I into chains along the c axis. The crystal packing of the chains is stacking along the a axis.
For metal complexes with 2,2'-dipyridyl dichalcogenides, see: Kadooka et al. (1976a,b); Cheng et al. (1996); Kienitz et al. (1996); Bell et al. (2000); Kita et al. (2001); Kedarnath et al. (2009). For syntheses and structures of related tin(IV) compounds, see: Masaki & Matsunami (1976); Masaki et al. (1978); Labisbal et al. (1993); Chopra et al. (1996); Ismaylova et al. (2012).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[SnCl2(C5H4NSe)2] | F(000) = 936 |
Mr = 503.69 | Dx = 2.438 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 4192 reflections |
a = 6.5174 (4) Å | θ = 2.5–32.4° |
b = 13.1221 (8) Å | µ = 7.53 mm−1 |
c = 16.3066 (9) Å | T = 100 K |
β = 100.194 (1)° | Prism, yellow |
V = 1372.56 (14) Å3 | 0.18 × 0.15 × 0.15 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 2464 independent reflections |
Radiation source: fine-focus sealed tube | 2149 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
φ and ω scans | θmax = 32.5°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −9→9 |
Tmin = 0.344, Tmax = 0.398 | k = −19→19 |
9918 measured reflections | l = −24→24 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.026 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.063 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.037P)2] where P = (Fo2 + 2Fc2)/3 |
2464 reflections | (Δ/σ)max = 0.001 |
78 parameters | Δρmax = 0.79 e Å−3 |
0 restraints | Δρmin = −0.87 e Å−3 |
[SnCl2(C5H4NSe)2] | V = 1372.56 (14) Å3 |
Mr = 503.69 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 6.5174 (4) Å | µ = 7.53 mm−1 |
b = 13.1221 (8) Å | T = 100 K |
c = 16.3066 (9) Å | 0.18 × 0.15 × 0.15 mm |
β = 100.194 (1)° |
Bruker APEXII CCD diffractometer | 2464 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 2149 reflections with I > 2σ(I) |
Tmin = 0.344, Tmax = 0.398 | Rint = 0.031 |
9918 measured reflections |
R[F2 > 2σ(F2)] = 0.026 | 0 restraints |
wR(F2) = 0.063 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.79 e Å−3 |
2464 reflections | Δρmin = −0.87 e Å−3 |
78 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Sn1 | 0.5000 | 0.622617 (17) | 0.2500 | 0.01852 (6) | |
Se1 | 0.16999 (4) | 0.584912 (19) | 0.140130 (15) | 0.02190 (7) | |
Cl1 | 0.67676 (9) | 0.74412 (5) | 0.17723 (4) | 0.02544 (12) | |
N1 | 0.5494 (3) | 0.49464 (16) | 0.16204 (12) | 0.0204 (4) | |
C2 | 0.3618 (4) | 0.48906 (18) | 0.11081 (14) | 0.0209 (4) | |
C3 | 0.3249 (4) | 0.41919 (19) | 0.04601 (16) | 0.0237 (5) | |
H3 | 0.1933 | 0.4158 | 0.0101 | 0.028* | |
C4 | 0.4867 (4) | 0.35439 (19) | 0.03530 (16) | 0.0263 (5) | |
H4 | 0.4663 | 0.3060 | −0.0087 | 0.032* | |
C5 | 0.6780 (4) | 0.35981 (19) | 0.08840 (17) | 0.0257 (5) | |
H5 | 0.7885 | 0.3153 | 0.0814 | 0.031* | |
C6 | 0.7045 (4) | 0.4308 (2) | 0.15137 (16) | 0.0235 (5) | |
H6 | 0.8348 | 0.4350 | 0.1881 | 0.028* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Sn1 | 0.01985 (11) | 0.01864 (11) | 0.01647 (10) | 0.000 | 0.00155 (8) | 0.000 |
Se1 | 0.01990 (12) | 0.02333 (13) | 0.02113 (12) | 0.00098 (8) | −0.00005 (9) | −0.00003 (8) |
Cl1 | 0.0290 (3) | 0.0255 (3) | 0.0217 (3) | −0.0056 (2) | 0.0040 (2) | 0.0025 (2) |
N1 | 0.0221 (9) | 0.0210 (9) | 0.0176 (9) | −0.0009 (7) | 0.0018 (7) | 0.0003 (7) |
C2 | 0.0218 (10) | 0.0201 (10) | 0.0203 (10) | −0.0017 (8) | 0.0026 (8) | 0.0022 (8) |
C3 | 0.0270 (11) | 0.0237 (11) | 0.0191 (11) | −0.0029 (9) | 0.0001 (9) | 0.0003 (8) |
C4 | 0.0353 (13) | 0.0206 (11) | 0.0231 (11) | −0.0035 (9) | 0.0055 (10) | −0.0029 (9) |
C5 | 0.0317 (12) | 0.0215 (11) | 0.0247 (12) | 0.0035 (9) | 0.0074 (10) | 0.0004 (9) |
C6 | 0.0245 (11) | 0.0239 (11) | 0.0227 (11) | 0.0007 (9) | 0.0054 (9) | 0.0033 (9) |
Sn1—N1 | 2.268 (2) | C3—C4 | 1.389 (4) |
Sn1—Cl1 | 2.4002 (6) | C3—H3 | 0.9500 |
Sn1—Se1 | 2.5917 (3) | C4—C5 | 1.388 (4) |
Se1—C2 | 1.893 (2) | C4—H4 | 0.9500 |
N1—C6 | 1.348 (3) | C5—C6 | 1.375 (4) |
N1—C2 | 1.355 (3) | C5—H5 | 0.9500 |
C2—C3 | 1.388 (3) | C6—H6 | 0.9500 |
N1—Sn1—N1i | 84.47 (10) | N1—C2—Se1 | 111.86 (17) |
N1—Sn1—Cl1 | 92.57 (5) | C3—C2—Se1 | 126.74 (19) |
N1i—Sn1—Cl1 | 159.83 (5) | C2—C3—C4 | 117.9 (2) |
Cl1—Sn1—Cl1i | 96.75 (3) | C2—C3—H3 | 121.1 |
N1—Sn1—Se1 | 67.34 (5) | C4—C3—H3 | 121.1 |
N1i—Sn1—Se1 | 95.89 (5) | C5—C4—C3 | 120.5 (2) |
Cl1—Sn1—Se1 | 101.376 (16) | C5—C4—H4 | 119.7 |
Cl1i—Sn1—Se1 | 93.231 (16) | C3—C4—H4 | 119.7 |
N1—Sn1—Se1i | 95.89 (5) | C6—C5—C4 | 118.8 (2) |
Se1—Sn1—Se1i | 157.988 (15) | C6—C5—H5 | 120.6 |
C2—Se1—Sn1 | 78.30 (7) | C4—C5—H5 | 120.6 |
C6—N1—C2 | 120.2 (2) | N1—C6—C5 | 121.3 (2) |
C6—N1—Sn1 | 137.34 (17) | N1—C6—H6 | 119.4 |
C2—N1—Sn1 | 102.49 (15) | C5—C6—H6 | 119.4 |
N1—C2—C3 | 121.4 (2) | ||
N1—Sn1—Se1—C2 | −0.40 (9) | Se1i—Sn1—N1—C2 | 165.79 (14) |
N1i—Sn1—Se1—C2 | −81.89 (9) | C6—N1—C2—C3 | −0.8 (3) |
Cl1—Sn1—Se1—C2 | 87.63 (7) | Sn1—N1—C2—C3 | 179.55 (19) |
Cl1i—Sn1—Se1—C2 | −174.81 (7) | C6—N1—C2—Se1 | 178.91 (17) |
Se1i—Sn1—Se1—C2 | −43.00 (7) | Sn1—N1—C2—Se1 | −0.77 (17) |
N1i—Sn1—N1—C6 | −80.3 (2) | Sn1—Se1—C2—N1 | 0.67 (15) |
Cl1—Sn1—N1—C6 | 79.7 (2) | Sn1—Se1—C2—C3 | −179.7 (2) |
Cl1i—Sn1—N1—C6 | −162.64 (17) | N1—C2—C3—C4 | 0.3 (4) |
Se1—Sn1—N1—C6 | −179.0 (3) | Se1—C2—C3—C4 | −179.38 (18) |
Se1i—Sn1—N1—C6 | −13.8 (2) | C2—C3—C4—C5 | 0.3 (4) |
N1i—Sn1—N1—C2 | 99.31 (15) | C3—C4—C5—C6 | −0.4 (4) |
Cl1—Sn1—N1—C2 | −100.69 (14) | C2—N1—C6—C5 | 0.7 (4) |
Cl1i—Sn1—N1—C2 | 16.9 (3) | Sn1—N1—C6—C5 | −179.76 (18) |
Se1—Sn1—N1—C2 | 0.56 (12) | C4—C5—C6—N1 | −0.1 (4) |
Symmetry code: (i) −x+1, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···Cl1ii | 0.95 | 2.82 | 3.675 (3) | 151 |
Symmetry code: (ii) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [SnCl2(C5H4NSe)2] |
Mr | 503.69 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 6.5174 (4), 13.1221 (8), 16.3066 (9) |
β (°) | 100.194 (1) |
V (Å3) | 1372.56 (14) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 7.53 |
Crystal size (mm) | 0.18 × 0.15 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.344, 0.398 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9918, 2464, 2149 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.755 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.026, 0.063, 1.00 |
No. of reflections | 2464 |
No. of parameters | 78 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.79, −0.87 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2001), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···Cl1i | 0.95 | 2.82 | 3.675 (3) | 151 |
Symmetry code: (i) −x+1, −y+1, −z. |
Acknowledgements
The authors thank Professor Abel M. Maharramov for fruitful discussions and help in this work.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The coordination chemistry of 2,2'-dipyridyl dichalcogenides to metal ions is a topic of current research interest owing to the application of these complexes as potential precursors for the generation of semiconducting materials (Kadooka et al., 1976a,b; Cheng et al., 1996; Kienitz et al., 1996; Bell et al., 2000; Kita et al., 2001; Kedarnath et al., 2009).
This article describes dichloridobis(pyridine-2-selenolato-k2N,Se)-tin(IV), C10H8Cl2N2Se2Sn (I), which was obtained by the reaction of 2,2'-dipyridyl diselenide with tin tetrachloride (Fig. 1). Compound I is isostructural with the monoclinic modification of the related thio-analogue reported by us very recently (Ismaylova et al., 2012). For the synthesis and structure of the triclinic modification of this thio-analogue, see: Masaki & Matsunami (1976) and Masaki et al. (1978).
The molecule of I possesses overall intrinsic C2 symmetry and occupies a special position on the twofold axis. The Sn atom adopts a distorted octahedral geometry, with the two bidentate 2-pyridineselenolate ligands forming two planar four-membered chelate rings (Fig. 2). The two Sn—Cl, two Sn—N and two Sn—Se bonds are in cis, cis and trans configurations, respectively. The lengths of the two covalent Sn—Se bonds [2.5917 (3) Å] are in good accordance with those in the previously studied analogous octahedral tin(IV) complexes (Labisbal et al., 1993; Chopra et al., 1996).
In the crystal, π–π interactions between the pyridine rings [centroid-to-centroid distance of 3.758 (3) Å] and weak intermolecular C4—H4···Cl1 hydrogen bonds (Fig. 3, Table 1) link the molecules of I into chains along the c axis. The crystal packing of the chains is stacking along the a axis.