organic compounds
(−)-Norfluorocurarine ethanol monosolvate
aS.Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of Uzbekistan, Mirzo Ulugbek Str., 77, Tashkent 100170, Uzbekistan, bInstitute of Bioorganic Chemistry, Academy of Sciences of Uzbekistan, Mirzo Ulugbek Str., 83, Tashkent 100125, Uzbekistan, and cTashkent Institute of Irrigation and Melioration, Kori-Niyoziy Str., 39, Tashkent, 100000, Uzbekistan
*Correspondence e-mail: adizovshahobiddin@yahoo.com
The title compound, C19H20N2O·C2H5OH, is an ethanol solvate of an indol alkaloid which was extracted from the plant Vinca erecta. The fused piperidine ring adopts an approximate boat conformation and the pyrrolidine ring an with one of the methylene C atoms at the flap. An intramolecular N—H⋯O hydrogen bond forms an S6 ring motif. In the crystal, norfulorocurarine and ethanol molecules are linked into a chain along the c-axis direction through N—H⋯O and O—H⋯N hydrogen bonds.
Related literature
For the biological activity of plants containing norfluorocurarine class ). For the isolation of norfluorocurarine from the plant Vinca erecta, see: Yunusov & Yuldashev (1952, 1957). For the physical properties and crystal structures of several norfluorocurarine solvates, see: Tashkhodjaev et al. (2011).
see: Lavrenova & Lavrenov (1997Experimental
Crystal data
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Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXS97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536813015365/is5277sup1.cif
contains datablocks I, GLOBAL. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536813015365/is5277Isup2.hkl
The title compound was isolated from the chloroform fraction of the plant Vinca erecta by a known method (Yunusov et al., 1957). Norflurocurarine was dissolved in ethanol and evaporated in room temperature and obtained suitable for X-ray crystals. Since the crystal was unstable in air, we covered it with epoxide glue.
The H atoms bonded to N1 and O2 were located in a difference Fourier map and refined isotropically. The H atoms bonded to C atoms were placed geometrically (with C—H distances of 0.98 Å for CH, 0.97 Å for CH2, 0.96 Å for CH3 and 0.93 Å for Car) and included in the
in a riding motion approximation with Uiso(H) = 1.2Ueq(C) [Uiso(H) = 1.5Ueq(C) for methyl H atoms].Because of possessing high biological activity, plants containing norfluorocurarine class
have been widely used in traditional medicine. A number of plants as Vinca major L. and Vinca herbacea Waldst. et Kit. are examples which are used as a healing agent in traditional medicine (Lavrenova et al., 1997). Norfluorocurarine for the first time was extracted from the root of Vinca erecta and called vincanine (Yunusov & Yuldashev, 1952). Later the alkaloid was extraxted from the upper parts of the same plant (Yunusov & Yuldashev, 1957).Earlier unsolvated crystal form of (-)-norfluorocurarine was obtained from acetone and stereochemistry studied by Tashkhodjaev et al. (2011). When we used ethanol as a solvent, XRD experiments showed the solvated structure in the molar ratio 1:1. Crystals which were obtained in acetone and in ethanol showed the same
of alkaloid molecule. But the crystal packing and intermolecular bonds are quite different.In the molecule, the carbonyl group is oriented to N1—H group. The torsion angle of C2═C16—C17═O1 atoms is -11.7 (5)°. Therefore, the carbonyl group and N1—H group form an intramolecular hydrogen bond N1—H···O1═ C17 (Table 1). In the crystal, the hydroxyl group of solvated ethanol molecules forms intermolecular hydrogen bonds with norfluorocurarine N1 and N4 atoms (Table 1). The hydrogen bonds links the norfluorocurarine and ethanol molecules along the c axis.
For the biological activity of plants containing norfluorocurarine class
see: Lavrenova & Lavrenov (1997). For the isolation of norfluorocurarine from the plant Vinca erecta, see: Yunusov & Yuldashev (1952, 1957). For the physical properties and crystal structures of several norfluorocurarine solvates, see: Tashkhodjaev et al. (2011).Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXS97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound, showing the atomic numbering scheme and displacement ellipsoids drawn at the 30% probability level. |
C19H20N2O·C2H6O | F(000) = 728 |
Mr = 338.44 | Dx = 1.208 Mg m−3 |
Orthorhombic, P212121 | Cu Kα radiation, λ = 1.54184 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 1783 reflections |
a = 7.0138 (5) Å | θ = 3.8–75.7° |
b = 16.090 (1) Å | µ = 0.62 mm−1 |
c = 16.490 (2) Å | T = 293 K |
V = 1860.9 (3) Å3 | Prysmatic, orange |
Z = 4 | 0.60 × 0.30 × 0.20 mm |
Oxford Xcalibur, Ruby diffractometer | 3178 independent reflections |
Radiation source: fine-focus sealed tube | 2393 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
Detector resolution: 10.2576 pixels mm-1 | θmax = 70.0°, θmin = 3.8° |
ω–scan | h = −8→7 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | k = −19→17 |
Tmin = 0.801, Tmax = 0.884 | l = −18→20 |
5608 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.051 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.142 | w = 1/[σ2(Fo2) + (0.0858P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.99 | (Δ/σ)max < 0.001 |
3178 reflections | Δρmax = 0.33 e Å−3 |
237 parameters | Δρmin = −0.19 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0029 (5) |
C19H20N2O·C2H6O | V = 1860.9 (3) Å3 |
Mr = 338.44 | Z = 4 |
Orthorhombic, P212121 | Cu Kα radiation |
a = 7.0138 (5) Å | µ = 0.62 mm−1 |
b = 16.090 (1) Å | T = 293 K |
c = 16.490 (2) Å | 0.60 × 0.30 × 0.20 mm |
Oxford Xcalibur, Ruby diffractometer | 3178 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | 2393 reflections with I > 2σ(I) |
Tmin = 0.801, Tmax = 0.884 | Rint = 0.027 |
5608 measured reflections |
R[F2 > 2σ(F2)] = 0.051 | 0 restraints |
wR(F2) = 0.142 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.99 | Δρmax = 0.33 e Å−3 |
3178 reflections | Δρmin = −0.19 e Å−3 |
237 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.3603 (4) | 0.42899 (18) | 0.25960 (15) | 0.0803 (8) | |
N1 | 0.3795 (4) | 0.54279 (16) | 0.38661 (17) | 0.0502 (6) | |
C2 | 0.2579 (4) | 0.48488 (18) | 0.41767 (17) | 0.0449 (6) | |
C3 | 0.1580 (4) | 0.44089 (18) | 0.56238 (18) | 0.0480 (7) | |
H3A | 0.2381 | 0.4495 | 0.6103 | 0.058* | |
N4 | −0.0460 (3) | 0.44531 (15) | 0.58692 (15) | 0.0497 (6) | |
C5 | −0.1003 (4) | 0.53164 (17) | 0.57301 (18) | 0.0502 (7) | |
H5A | −0.0557 | 0.5667 | 0.6169 | 0.060* | |
H5B | −0.2378 | 0.5368 | 0.5690 | 0.060* | |
C6 | −0.0061 (4) | 0.55619 (17) | 0.49369 (18) | 0.0458 (7) | |
H6A | 0.0052 | 0.6161 | 0.4890 | 0.055* | |
H6B | −0.0769 | 0.5350 | 0.4475 | 0.055* | |
C7 | 0.1943 (4) | 0.51410 (16) | 0.50026 (16) | 0.0415 (6) | |
C8 | 0.3434 (4) | 0.57872 (15) | 0.51991 (17) | 0.0429 (6) | |
C9 | 0.3820 (4) | 0.62291 (17) | 0.58936 (18) | 0.0483 (7) | |
H9A | 0.3178 | 0.6114 | 0.6374 | 0.058* | |
C10 | 0.5188 (5) | 0.68503 (18) | 0.5862 (2) | 0.0548 (8) | |
H10A | 0.5490 | 0.7144 | 0.6330 | 0.066* | |
C11 | 0.6111 (4) | 0.70392 (17) | 0.5142 (2) | 0.0545 (8) | |
H11A | 0.7014 | 0.7463 | 0.5134 | 0.065* | |
C12 | 0.5718 (4) | 0.66105 (18) | 0.4433 (2) | 0.0519 (8) | |
H12A | 0.6323 | 0.6740 | 0.3948 | 0.062* | |
C13 | 0.4380 (4) | 0.59779 (17) | 0.44827 (19) | 0.0451 (6) | |
C14 | 0.2033 (5) | 0.35663 (17) | 0.5262 (2) | 0.0561 (8) | |
H14A | 0.1569 | 0.3129 | 0.5615 | 0.067* | |
H14B | 0.3401 | 0.3502 | 0.5203 | 0.067* | |
C15 | 0.1066 (5) | 0.35033 (17) | 0.4430 (2) | 0.0542 (8) | |
H15A | 0.1239 | 0.2937 | 0.4224 | 0.065* | |
C16 | 0.2053 (4) | 0.41012 (19) | 0.3855 (2) | 0.0507 (7) | |
C17 | 0.2757 (5) | 0.3843 (2) | 0.3081 (2) | 0.0644 (9) | |
H17A | 0.2557 | 0.3293 | 0.2932 | 0.077* | |
C18 | −0.2094 (6) | 0.3305 (2) | 0.3113 (2) | 0.0717 (10) | |
H18A | −0.3063 | 0.2909 | 0.2970 | 0.108* | |
H18B | −0.0862 | 0.3049 | 0.3064 | 0.108* | |
H18C | −0.2167 | 0.3774 | 0.2755 | 0.108* | |
C19 | −0.2388 (5) | 0.35864 (19) | 0.3968 (2) | 0.0591 (8) | |
H19A | −0.3632 | 0.3725 | 0.4110 | 0.071* | |
C20 | −0.1099 (5) | 0.36621 (16) | 0.4544 (2) | 0.0519 (7) | |
C21 | −0.1658 (4) | 0.3855 (2) | 0.5405 (2) | 0.0578 (8) | |
H21A | −0.2951 | 0.4069 | 0.5398 | 0.069* | |
H21B | −0.1682 | 0.3336 | 0.5703 | 0.069* | |
O2 | 0.6272 (5) | 0.5922 (2) | 0.2494 (2) | 0.0966 (10) | |
C22 | 0.8184 (10) | 0.5554 (3) | 0.2572 (3) | 0.122 (2) | |
H22A | 0.8317 | 0.5300 | 0.3102 | 0.146* | |
H22B | 0.8352 | 0.5125 | 0.2165 | 0.146* | |
C23 | 0.9609 (10) | 0.6183 (5) | 0.2469 (4) | 0.142 (2) | |
H23A | 1.0852 | 0.5935 | 0.2498 | 0.213* | |
H23B | 0.9482 | 0.6591 | 0.2890 | 0.213* | |
H23C | 0.9449 | 0.6445 | 0.1951 | 0.213* | |
H1 | 0.428 (5) | 0.544 (2) | 0.338 (2) | 0.073 (12)* | |
H2 | 0.599 (8) | 0.585 (3) | 0.193 (3) | 0.125 (19)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0735 (16) | 0.1134 (19) | 0.0539 (16) | −0.0183 (17) | 0.0078 (14) | −0.0189 (14) |
N1 | 0.0464 (13) | 0.0663 (14) | 0.0377 (15) | −0.0053 (12) | 0.0064 (12) | 0.0009 (11) |
C2 | 0.0343 (13) | 0.0568 (14) | 0.0435 (17) | 0.0022 (13) | −0.0031 (12) | 0.0060 (12) |
C3 | 0.0483 (15) | 0.0554 (15) | 0.0403 (17) | −0.0032 (13) | −0.0033 (13) | 0.0104 (12) |
N4 | 0.0471 (13) | 0.0575 (13) | 0.0446 (15) | −0.0064 (11) | 0.0011 (11) | 0.0065 (11) |
C5 | 0.0431 (15) | 0.0573 (16) | 0.0503 (19) | 0.0014 (13) | 0.0048 (13) | 0.0017 (13) |
C6 | 0.0386 (13) | 0.0491 (14) | 0.0496 (19) | 0.0003 (12) | −0.0025 (13) | 0.0056 (13) |
C7 | 0.0421 (14) | 0.0448 (12) | 0.0374 (16) | 0.0035 (11) | 0.0002 (12) | 0.0046 (11) |
C8 | 0.0391 (14) | 0.0467 (14) | 0.0429 (16) | 0.0034 (12) | 0.0034 (12) | 0.0068 (11) |
C9 | 0.0463 (15) | 0.0536 (15) | 0.0452 (17) | 0.0026 (14) | 0.0017 (14) | −0.0012 (12) |
C10 | 0.0530 (18) | 0.0528 (16) | 0.059 (2) | 0.0033 (14) | −0.0081 (16) | −0.0091 (15) |
C11 | 0.0400 (15) | 0.0482 (14) | 0.075 (2) | −0.0026 (13) | −0.0006 (16) | 0.0034 (14) |
C12 | 0.0408 (15) | 0.0559 (16) | 0.059 (2) | −0.0014 (13) | 0.0056 (15) | 0.0046 (14) |
C13 | 0.0402 (13) | 0.0517 (14) | 0.0433 (17) | 0.0034 (12) | 0.0011 (13) | 0.0033 (12) |
C14 | 0.0549 (18) | 0.0500 (15) | 0.063 (2) | 0.0010 (14) | −0.0056 (16) | 0.0103 (14) |
C15 | 0.0532 (17) | 0.0443 (13) | 0.065 (2) | 0.0029 (13) | −0.0015 (17) | −0.0026 (13) |
C16 | 0.0426 (14) | 0.0571 (16) | 0.0523 (18) | 0.0017 (13) | −0.0007 (14) | −0.0054 (14) |
C17 | 0.0554 (18) | 0.074 (2) | 0.063 (2) | −0.0033 (18) | −0.0025 (18) | −0.0231 (17) |
C18 | 0.067 (2) | 0.074 (2) | 0.074 (3) | −0.0043 (19) | −0.007 (2) | −0.0130 (18) |
C19 | 0.0529 (18) | 0.0570 (16) | 0.067 (2) | −0.0049 (15) | 0.0005 (17) | −0.0034 (15) |
C20 | 0.0522 (17) | 0.0448 (14) | 0.059 (2) | −0.0074 (13) | 0.0003 (16) | 0.0029 (13) |
C21 | 0.0508 (17) | 0.0622 (17) | 0.061 (2) | −0.0128 (14) | 0.0042 (16) | 0.0074 (15) |
O2 | 0.0799 (19) | 0.159 (3) | 0.0515 (18) | −0.028 (2) | 0.0055 (16) | −0.0156 (18) |
C22 | 0.194 (6) | 0.102 (3) | 0.068 (3) | −0.011 (4) | −0.040 (4) | 0.007 (3) |
C23 | 0.128 (5) | 0.167 (6) | 0.132 (5) | −0.044 (4) | 0.007 (4) | −0.002 (5) |
O1—C17 | 1.228 (4) | C12—C13 | 1.387 (4) |
N1—C2 | 1.363 (4) | C12—H12A | 0.9300 |
N1—C13 | 1.409 (4) | C14—C15 | 1.533 (5) |
N1—H1 | 0.87 (4) | C14—H14A | 0.9700 |
C2—C16 | 1.365 (4) | C14—H14B | 0.9700 |
C2—C7 | 1.508 (4) | C15—C16 | 1.518 (4) |
C3—N4 | 1.489 (4) | C15—C20 | 1.551 (5) |
C3—C14 | 1.515 (4) | C15—H15A | 0.9800 |
C3—C7 | 1.582 (3) | C16—C17 | 1.431 (5) |
C3—H3A | 0.9800 | C17—H17A | 0.9300 |
N4—C5 | 1.459 (4) | C18—C19 | 1.496 (5) |
N4—C21 | 1.489 (4) | C18—H18A | 0.9600 |
C5—C6 | 1.518 (4) | C18—H18B | 0.9600 |
C5—H5A | 0.9700 | C18—H18C | 0.9600 |
C5—H5B | 0.9700 | C19—C20 | 1.317 (5) |
C6—C7 | 1.564 (4) | C19—H19A | 0.9300 |
C6—H6A | 0.9700 | C20—C21 | 1.505 (5) |
C6—H6B | 0.9700 | C21—H21A | 0.9700 |
C7—C8 | 1.509 (4) | C21—H21B | 0.9700 |
C8—C9 | 1.375 (4) | O2—C22 | 1.471 (7) |
C8—C13 | 1.389 (4) | O2—H2 | 0.95 (5) |
C9—C10 | 1.387 (4) | C22—C23 | 1.433 (8) |
C9—H9A | 0.9300 | C22—H22A | 0.9700 |
C10—C11 | 1.386 (4) | C22—H22B | 0.9700 |
C10—H10A | 0.9300 | C23—H23A | 0.9600 |
C11—C12 | 1.384 (4) | C23—H23B | 0.9600 |
C11—H11A | 0.9300 | C23—H23C | 0.9600 |
C2—N1—C13 | 109.9 (3) | C8—C13—N1 | 109.6 (2) |
C2—N1—H1 | 128 (2) | C3—C14—C15 | 108.6 (2) |
C13—N1—H1 | 122 (2) | C3—C14—H14A | 110.0 |
N1—C2—C16 | 128.7 (3) | C15—C14—H14A | 110.0 |
N1—C2—C7 | 108.1 (2) | C3—C14—H14B | 110.0 |
C16—C2—C7 | 123.0 (3) | C15—C14—H14B | 110.0 |
N4—C3—C14 | 110.6 (2) | H14A—C14—H14B | 108.4 |
N4—C3—C7 | 107.2 (2) | C16—C15—C14 | 108.3 (3) |
C14—C3—C7 | 112.2 (2) | C16—C15—C20 | 114.7 (2) |
N4—C3—H3A | 109.0 | C14—C15—C20 | 108.3 (3) |
C14—C3—H3A | 109.0 | C16—C15—H15A | 108.4 |
C7—C3—H3A | 109.0 | C14—C15—H15A | 108.4 |
C5—N4—C3 | 104.7 (2) | C20—C15—H15A | 108.4 |
C5—N4—C21 | 112.8 (2) | C2—C16—C17 | 120.6 (3) |
C3—N4—C21 | 111.8 (2) | C2—C16—C15 | 116.1 (3) |
N4—C5—C6 | 105.6 (2) | C17—C16—C15 | 122.1 (3) |
N4—C5—H5A | 110.6 | O1—C17—C16 | 125.3 (3) |
C6—C5—H5A | 110.6 | O1—C17—H17A | 117.3 |
N4—C5—H5B | 110.6 | C16—C17—H17A | 117.3 |
C6—C5—H5B | 110.6 | C19—C18—H18A | 109.5 |
H5A—C5—H5B | 108.7 | C19—C18—H18B | 109.5 |
C5—C6—C7 | 102.6 (2) | H18A—C18—H18B | 109.5 |
C5—C6—H6A | 111.2 | C19—C18—H18C | 109.5 |
C7—C6—H6A | 111.2 | H18A—C18—H18C | 109.5 |
C5—C6—H6B | 111.2 | H18B—C18—H18C | 109.5 |
C7—C6—H6B | 111.2 | C20—C19—C18 | 127.8 (3) |
H6A—C6—H6B | 109.2 | C20—C19—H19A | 116.1 |
C2—C7—C8 | 101.8 (2) | C18—C19—H19A | 116.1 |
C2—C7—C6 | 109.8 (2) | C19—C20—C21 | 121.4 (3) |
C8—C7—C6 | 109.8 (2) | C19—C20—C15 | 124.7 (3) |
C2—C7—C3 | 113.6 (2) | C21—C20—C15 | 113.7 (3) |
C8—C7—C3 | 119.0 (2) | N4—C21—C20 | 118.1 (2) |
C6—C7—C3 | 102.9 (2) | N4—C21—H21A | 107.8 |
C9—C8—C13 | 120.0 (3) | C20—C21—H21A | 107.8 |
C9—C8—C7 | 132.2 (3) | N4—C21—H21B | 107.8 |
C13—C8—C7 | 107.5 (2) | C20—C21—H21B | 107.8 |
C8—C9—C10 | 118.5 (3) | H21A—C21—H21B | 107.1 |
C8—C9—H9A | 120.7 | C22—O2—H2 | 103 (3) |
C10—C9—H9A | 120.7 | C23—C22—O2 | 110.0 (5) |
C11—C10—C9 | 120.9 (3) | C23—C22—H22A | 109.7 |
C11—C10—H10A | 119.5 | O2—C22—H22A | 109.7 |
C9—C10—H10A | 119.5 | C23—C22—H22B | 109.7 |
C12—C11—C10 | 121.3 (3) | O2—C22—H22B | 109.7 |
C12—C11—H11A | 119.3 | H22A—C22—H22B | 108.2 |
C10—C11—H11A | 119.3 | C22—C23—H23A | 109.5 |
C11—C12—C13 | 116.8 (3) | C22—C23—H23B | 109.5 |
C11—C12—H12A | 121.6 | H23A—C23—H23B | 109.5 |
C13—C12—H12A | 121.6 | C22—C23—H23C | 109.5 |
C12—C13—C8 | 122.4 (3) | H23A—C23—H23C | 109.5 |
C12—C13—N1 | 128.0 (3) | H23B—C23—H23C | 109.5 |
C13—N1—C2—C16 | −162.4 (3) | C10—C11—C12—C13 | −0.9 (4) |
C13—N1—C2—C7 | 13.9 (3) | C11—C12—C13—C8 | 1.4 (4) |
C14—C3—N4—C5 | −146.6 (2) | C11—C12—C13—N1 | −176.8 (3) |
C7—C3—N4—C5 | −24.0 (3) | C9—C8—C13—C12 | −0.4 (4) |
C14—C3—N4—C21 | −24.2 (3) | C7—C8—C13—C12 | 173.6 (2) |
C7—C3—N4—C21 | 98.4 (3) | C9—C8—C13—N1 | 178.1 (2) |
C3—N4—C5—C6 | 40.5 (3) | C7—C8—C13—N1 | −7.9 (3) |
C21—N4—C5—C6 | −81.3 (3) | C2—N1—C13—C12 | 174.5 (3) |
N4—C5—C6—C7 | −40.3 (3) | C2—N1—C13—C8 | −3.9 (3) |
N1—C2—C7—C8 | −17.6 (3) | N4—C3—C14—C15 | 70.8 (3) |
C16—C2—C7—C8 | 159.0 (3) | C7—C3—C14—C15 | −48.7 (3) |
N1—C2—C7—C6 | 98.7 (3) | C3—C14—C15—C16 | 68.8 (3) |
C16—C2—C7—C6 | −84.7 (3) | C3—C14—C15—C20 | −56.2 (3) |
N1—C2—C7—C3 | −146.8 (2) | N1—C2—C16—C17 | −1.8 (5) |
C16—C2—C7—C3 | 29.8 (4) | C7—C2—C16—C17 | −177.7 (3) |
C5—C6—C7—C2 | 145.0 (2) | N1—C2—C16—C15 | 165.5 (3) |
C5—C6—C7—C8 | −104.0 (2) | C7—C2—C16—C15 | −10.3 (4) |
C5—C6—C7—C3 | 23.7 (3) | C14—C15—C16—C2 | −38.9 (4) |
N4—C3—C7—C2 | −119.1 (3) | C20—C15—C16—C2 | 82.2 (3) |
C14—C3—C7—C2 | 2.4 (3) | C14—C15—C16—C17 | 128.2 (3) |
N4—C3—C7—C8 | 121.1 (3) | C20—C15—C16—C17 | −110.7 (3) |
C14—C3—C7—C8 | −117.4 (3) | C2—C16—C17—O1 | −11.7 (5) |
N4—C3—C7—C6 | −0.6 (3) | C15—C16—C17—O1 | −178.3 (3) |
C14—C3—C7—C6 | 120.9 (3) | C18—C19—C20—C21 | −172.5 (3) |
C2—C7—C8—C9 | −171.9 (3) | C18—C19—C20—C15 | 2.8 (5) |
C6—C7—C8—C9 | 71.9 (4) | C16—C15—C20—C19 | 64.9 (4) |
C3—C7—C8—C9 | −46.2 (4) | C14—C15—C20—C19 | −173.9 (3) |
C2—C7—C8—C13 | 15.1 (3) | C16—C15—C20—C21 | −119.4 (3) |
C6—C7—C8—C13 | −101.1 (3) | C14—C15—C20—C21 | 1.7 (3) |
C3—C7—C8—C13 | 140.8 (3) | C5—N4—C21—C20 | 85.3 (3) |
C13—C8—C9—C10 | −1.2 (4) | C3—N4—C21—C20 | −32.3 (4) |
C7—C8—C9—C10 | −173.5 (3) | C19—C20—C21—N4 | −139.5 (3) |
C8—C9—C10—C11 | 1.8 (4) | C15—C20—C21—N4 | 44.7 (4) |
C9—C10—C11—C12 | −0.7 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.87 (3) | 2.31 (3) | 2.785 (4) | 115 (3) |
N1—H1···O2 | 0.87 (3) | 2.17 (3) | 2.961 (4) | 152 (3) |
O2—H2···N4i | 0.96 (5) | 1.85 (5) | 2.805 (4) | 172 (5) |
Symmetry code: (i) −x+1/2, −y+1, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C19H20N2O·C2H6O |
Mr | 338.44 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 293 |
a, b, c (Å) | 7.0138 (5), 16.090 (1), 16.490 (2) |
V (Å3) | 1860.9 (3) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 0.62 |
Crystal size (mm) | 0.60 × 0.30 × 0.20 |
Data collection | |
Diffractometer | Oxford Xcalibur, Ruby |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.801, 0.884 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5608, 3178, 2393 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.609 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.142, 0.99 |
No. of reflections | 3178 |
No. of parameters | 237 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.33, −0.19 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.87 (3) | 2.31 (3) | 2.785 (4) | 115 (3) |
N1—H1···O2 | 0.87 (3) | 2.17 (3) | 2.961 (4) | 152 (3) |
O2—H2···N4i | 0.96 (5) | 1.85 (5) | 2.805 (4) | 172 (5) |
Symmetry code: (i) −x+1/2, −y+1, z−1/2. |
Acknowledgements
We thank the Academy of Sciences of the Republic of Uzbekistan for supporting this study (grant No. FA-F7-T185)
References
Lavrenova, G. V. & Lavrenov, V. K. (1997). Entsiklopedia lekarstvennykh rastenii, Vol. 1. Ukraine: Donnechina. Google Scholar
Oxford Diffraction (2009). CrysAlis PRO. Oxford Diffraction Ltd, Abingdon, Oxfordshire, England. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Tashkhodjaev, B., Turgunov, K. K., Yuldashev, P. Kh. & Mirzaeva, M. M. (2011). Chem. Nat. Compd. 47, 531–535. Google Scholar
Yunusov, S. Yu. & Yuldashev, P. Kh. (1952). Dokl. Akad. Nauk Uzbekiskoi SSR, 12, 24–27. Google Scholar
Yunusov, S. Yu. & Yuldashev, P. Kh. (1957). Zh. Obshch. Khim. 27, 2015–2018. CAS Google Scholar
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Because of possessing high biological activity, plants containing norfluorocurarine class alkaloids have been widely used in traditional medicine. A number of plants as Vinca major L. and Vinca herbacea Waldst. et Kit. are examples which are used as a healing agent in traditional medicine (Lavrenova et al., 1997). Norfluorocurarine for the first time was extracted from the root of Vinca erecta and called vincanine (Yunusov & Yuldashev, 1952). Later the alkaloid was extraxted from the upper parts of the same plant (Yunusov & Yuldashev, 1957).
Earlier unsolvated crystal form of (-)-norfluorocurarine was obtained from acetone and stereochemistry studied by Tashkhodjaev et al. (2011). When we used ethanol as a solvent, XRD experiments showed the solvated structure in the molar ratio 1:1. Crystals which were obtained in acetone and in ethanol showed the same absolute configuration of alkaloid molecule. But the crystal packing and intermolecular bonds are quite different.
In the molecule, the carbonyl group is oriented to N1—H group. The torsion angle of C2═C16—C17═O1 atoms is -11.7 (5)°. Therefore, the carbonyl group and N1—H group form an intramolecular hydrogen bond N1—H···O1═ C17 (Table 1). In the crystal, the hydroxyl group of solvated ethanol molecules forms intermolecular hydrogen bonds with norfluorocurarine N1 and N4 atoms (Table 1). The hydrogen bonds links the norfluorocurarine and ethanol molecules along the c axis.