organic compounds
(1S,3S,8R,10R,11R)-3,7,7,10-Tetramethyltricyclo[6.4.0.01,3]dodecan-11-ol
aLaboratoire de Chimie Biomoléculaires, Substances Naturelles et Réactivité, URAC16, Faculté des Sciences, Semlalia, BP 2390 Bd My Abdellah, 40000 Marrakech, Morocco, bLaboratoire de Chimie du Solide Appliquée, Faculté des Sciences, Université MohammedV-Agdal, Avenue Ibn Battouta, BP 1014, Rabat, Morocco, and cLaboratoire de Chimie des Substances Naturelles `Unité Associé au CNRST (URAC16)', Faculté des Sciences Semlalia, BP 2390 Bd My Abdellah, 40000 Marrakech, Morocco
*Correspondence e-mail: berraho@uca.ma
The title compound, C16H28O, was synthesized by three steps from β-himachalene (3,5,5,9-tetramethyl-2,4a,5,6,7,8-hexahydro-1H-benzocycloheptene), which was isolated from the essential oil of the Atlas cedar (Cedrus atlantica). The molecule is built up from fused six- and seven-membered rings and an appended three-membered ring. The six-membered ring has twist-boat conformation, whereas the seven-membered ring displays a chair conformation. In the crystal, molecules are linked into chains propagating along the a-axis direction by O—H⋯O hydrogen bonds.
Related literature
For the reactivity and biological properties of β-himachalene, see: Auhmani et al.(2002); El Jamili et al. (2002); Daoubi et al. (2004). For related structures, see: Ourhriss et al. (2013); Benharref et al. (2013). For puckering parameters, see: Cremer & Pople (1975).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 2012).
Supporting information
10.1107/S1600536813020576/bt6923sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813020576/bt6923Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813020576/bt6923Isup3.cml
In a three-necked flask equipped with a dropping funnel, a condenser and a magnetic stirrer, maintained at 0°C, 2 g (6.6 mmol) of (1S,3R,8R) - 2,2-Dichloro-3,7,7,10-tetramethyltricyclo-[6.4.0.01,3] dodec-9-en-11-one (Auhmani et al., 2002) were introduced in 50 ml of ether. Then, 2 g of sodium were added by small portions during one hour, and dropwise 65 ml of a methanol solution 2.5% of water. The reaction mixture was stirred for 12 h. After hydrolysis with 20 mL of water, the two phases were separated and the aqueous phase was extracted three times with 20 ml of ether. The organic phases were combined and dried over sodium sulfate and concentrated. The residue obtained was chromatographed on a silica column with hexane and ethyl acetate(95/5) as
to give the sesquiterpene alcohol (1S, 3S,8R, 10R, 11R)-3,7,7,10- tetramethyltricyclo[6.4.0.01,3]dodec-11-ol with a yield of 97% (1.5 g; 6.4 mmol). The title compound was recrystallized from n-pentane.All H atoms were fixed geometrically and treated as riding with C—H = 0.96 Å (methyl), 0.97 Å (methylene), 0.98 Å (methine) and 0.82 Å (O–H) with Uiso(H) = 1.2Ueq (methylene, methine) or Uiso(H) = 1.5Ueq (methyl and OH). The methyl groups and the hydroxyl group were allowed to rotate but not to tip. In the absence of significant
the could not be reliably determined and thus Friedel pairs were merged and any references to the were removed.Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 2012).C16H28O | F(000) = 528 |
Mr = 236.38 | Dx = 1.091 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 1724 reflections |
a = 5.8796 (2) Å | θ = 2.7–26.4° |
b = 12.7822 (4) Å | µ = 0.07 mm−1 |
c = 19.1496 (7) Å | T = 298 K |
V = 1439.17 (8) Å3 | Prism, colourless |
Z = 4 | 0.25 × 0.15 × 0.10 mm |
Bruker APEXII CCD diffractometer | 1485 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.030 |
Graphite monochromator | θmax = 26.4°, θmin = 2.7° |
ω and ϕ scans | h = −7→6 |
8482 measured reflections | k = −15→15 |
1724 independent reflections | l = −23→23 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
wR(F2) = 0.102 | w = 1/[σ2(Fo2) + (0.0536P)2 + 0.1784P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
1724 reflections | Δρmax = 0.15 e Å−3 |
160 parameters | Δρmin = −0.12 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.012 (3) |
C16H28O | V = 1439.17 (8) Å3 |
Mr = 236.38 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 5.8796 (2) Å | µ = 0.07 mm−1 |
b = 12.7822 (4) Å | T = 298 K |
c = 19.1496 (7) Å | 0.25 × 0.15 × 0.10 mm |
Bruker APEXII CCD diffractometer | 1485 reflections with I > 2σ(I) |
8482 measured reflections | Rint = 0.030 |
1724 independent reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.15 e Å−3 |
1724 reflections | Δρmin = −0.12 e Å−3 |
160 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.8389 (3) | 1.04007 (14) | 0.11966 (10) | 0.0381 (4) | |
C2 | 0.9711 (4) | 1.13257 (15) | 0.14824 (11) | 0.0510 (5) | |
H2A | 1.1339 | 1.1244 | 0.1544 | 0.061* | |
H2B | 0.9231 | 1.2021 | 0.1342 | 0.061* | |
C3 | 0.8171 (4) | 1.07206 (16) | 0.19602 (11) | 0.0467 (5) | |
C4 | 0.9300 (4) | 1.00520 (18) | 0.25137 (11) | 0.0585 (6) | |
H4A | 0.9184 | 1.0411 | 0.2958 | 0.070* | |
H4B | 1.0904 | 0.9991 | 0.2402 | 0.070* | |
C5 | 0.8329 (5) | 0.89612 (19) | 0.25971 (11) | 0.0612 (6) | |
H5A | 0.6687 | 0.8995 | 0.2553 | 0.073* | |
H5B | 0.8678 | 0.8707 | 0.3062 | 0.073* | |
C6 | 0.9253 (4) | 0.81891 (16) | 0.20627 (10) | 0.0551 (6) | |
H6A | 0.8718 | 0.7499 | 0.2194 | 0.066* | |
H6B | 1.0896 | 0.8183 | 0.2108 | 0.066* | |
C7 | 0.8694 (3) | 0.83462 (15) | 0.12864 (10) | 0.0413 (5) | |
C8 | 0.9669 (3) | 0.93978 (13) | 0.09937 (9) | 0.0352 (4) | |
H8 | 1.1210 | 0.9467 | 0.1183 | 0.042* | |
C9 | 0.9916 (4) | 0.93761 (14) | 0.01895 (9) | 0.0439 (4) | |
H9A | 1.1288 | 0.8996 | 0.0068 | 0.053* | |
H9B | 0.8634 | 0.9003 | −0.0009 | 0.053* | |
C10 | 1.0027 (4) | 1.04668 (16) | −0.01305 (10) | 0.0489 (5) | |
H10 | 1.1151 | 1.0873 | 0.0133 | 0.059* | |
C11 | 0.7729 (4) | 1.09873 (15) | −0.00364 (12) | 0.0528 (6) | |
H11 | 0.6729 | 1.0760 | −0.0417 | 0.063* | |
C12 | 0.6602 (4) | 1.06999 (15) | 0.06595 (11) | 0.0464 (5) | |
H12A | 0.5728 | 1.1291 | 0.0830 | 0.056* | |
H12B | 0.5567 | 1.0118 | 0.0590 | 0.056* | |
C13 | 0.5996 (5) | 1.1233 (2) | 0.22183 (14) | 0.0690 (7) | |
H13A | 0.6296 | 1.1599 | 0.2646 | 0.104* | |
H13B | 0.4863 | 1.0706 | 0.2298 | 0.104* | |
H13C | 0.5456 | 1.1719 | 0.1874 | 0.104* | |
C14 | 0.6117 (4) | 0.82570 (18) | 0.11891 (13) | 0.0562 (6) | |
H14A | 0.5752 | 0.8317 | 0.0702 | 0.084* | |
H14B | 0.5375 | 0.8807 | 0.1443 | 0.084* | |
H14C | 0.5607 | 0.7591 | 0.1361 | 0.084* | |
C15 | 0.9811 (5) | 0.74201 (14) | 0.09077 (12) | 0.0563 (6) | |
H15A | 0.9325 | 0.6777 | 0.1119 | 0.084* | |
H15B | 1.1435 | 0.7478 | 0.0942 | 0.084* | |
H15C | 0.9371 | 0.7426 | 0.0425 | 0.084* | |
C16 | 1.0780 (6) | 1.0442 (2) | −0.08917 (12) | 0.0769 (8) | |
H16A | 1.2321 | 1.0197 | −0.0919 | 0.115* | |
H16B | 1.0686 | 1.1134 | −0.1085 | 0.115* | |
H16C | 0.9807 | 0.9980 | −0.1150 | 0.115* | |
O1 | 0.8089 (4) | 1.20972 (12) | −0.01013 (12) | 0.0789 (6) | |
H1 | 0.6857 | 1.2396 | −0.0120 | 0.118* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0310 (9) | 0.0379 (9) | 0.0454 (10) | −0.0016 (8) | −0.0027 (9) | −0.0033 (8) |
C2 | 0.0448 (12) | 0.0457 (10) | 0.0625 (13) | −0.0076 (10) | −0.0022 (11) | −0.0117 (9) |
C3 | 0.0404 (11) | 0.0495 (11) | 0.0502 (11) | −0.0040 (10) | 0.0018 (10) | −0.0143 (9) |
C4 | 0.0555 (14) | 0.0780 (15) | 0.0419 (11) | −0.0040 (12) | −0.0058 (11) | −0.0128 (10) |
C5 | 0.0680 (15) | 0.0762 (15) | 0.0394 (11) | −0.0016 (14) | 0.0003 (12) | 0.0067 (10) |
C6 | 0.0609 (14) | 0.0566 (12) | 0.0478 (11) | 0.0041 (11) | −0.0034 (11) | 0.0126 (10) |
C7 | 0.0406 (11) | 0.0402 (9) | 0.0431 (10) | −0.0007 (9) | −0.0014 (9) | 0.0032 (8) |
C8 | 0.0285 (9) | 0.0394 (9) | 0.0378 (9) | −0.0005 (8) | −0.0029 (8) | 0.0002 (7) |
C9 | 0.0476 (11) | 0.0420 (9) | 0.0419 (10) | 0.0026 (9) | 0.0028 (9) | −0.0010 (8) |
C10 | 0.0540 (12) | 0.0490 (11) | 0.0435 (10) | −0.0043 (11) | −0.0007 (10) | 0.0056 (9) |
C11 | 0.0549 (13) | 0.0448 (11) | 0.0586 (12) | −0.0005 (10) | −0.0141 (11) | 0.0099 (10) |
C12 | 0.0375 (10) | 0.0416 (10) | 0.0603 (12) | 0.0045 (9) | −0.0077 (10) | 0.0004 (9) |
C13 | 0.0592 (15) | 0.0730 (16) | 0.0748 (16) | 0.0046 (14) | 0.0130 (13) | −0.0234 (13) |
C14 | 0.0478 (12) | 0.0572 (13) | 0.0635 (13) | −0.0135 (11) | −0.0021 (11) | 0.0105 (11) |
C15 | 0.0687 (16) | 0.0371 (10) | 0.0632 (13) | 0.0014 (11) | 0.0020 (13) | 0.0016 (9) |
C16 | 0.100 (2) | 0.0785 (16) | 0.0527 (13) | 0.0024 (17) | 0.0111 (15) | 0.0157 (12) |
O1 | 0.0872 (13) | 0.0459 (8) | 0.1035 (14) | 0.0081 (9) | 0.0012 (13) | 0.0243 (9) |
C1—C2 | 1.517 (3) | C9—H9A | 0.9700 |
C1—C12 | 1.519 (3) | C9—H9B | 0.9700 |
C1—C3 | 1.524 (3) | C10—C11 | 1.517 (3) |
C1—C8 | 1.536 (2) | C10—C16 | 1.524 (3) |
C2—C3 | 1.502 (3) | C10—H10 | 0.9800 |
C2—H2A | 0.9700 | C11—O1 | 1.440 (2) |
C2—H2B | 0.9700 | C11—C12 | 1.533 (3) |
C3—C4 | 1.515 (3) | C11—H11 | 0.9800 |
C3—C13 | 1.520 (3) | C12—H12A | 0.9700 |
C4—C5 | 1.515 (3) | C12—H12B | 0.9700 |
C4—H4A | 0.9700 | C13—H13A | 0.9600 |
C4—H4B | 0.9700 | C13—H13B | 0.9600 |
C5—C6 | 1.522 (3) | C13—H13C | 0.9600 |
C5—H5A | 0.9700 | C14—H14A | 0.9600 |
C5—H5B | 0.9700 | C14—H14B | 0.9600 |
C6—C7 | 1.536 (3) | C14—H14C | 0.9600 |
C6—H6A | 0.9700 | C15—H15A | 0.9600 |
C6—H6B | 0.9700 | C15—H15B | 0.9600 |
C7—C14 | 1.531 (3) | C15—H15C | 0.9600 |
C7—C15 | 1.536 (3) | C16—H16A | 0.9600 |
C7—C8 | 1.565 (2) | C16—H16B | 0.9600 |
C8—C9 | 1.547 (2) | C16—H16C | 0.9600 |
C8—H8 | 0.9800 | O1—H1 | 0.8200 |
C9—C10 | 1.524 (3) | ||
C2—C1—C12 | 113.73 (16) | C10—C9—H9A | 109.0 |
C2—C1—C3 | 59.18 (13) | C8—C9—H9A | 109.0 |
C12—C1—C3 | 121.59 (17) | C10—C9—H9B | 109.0 |
C2—C1—C8 | 119.38 (16) | C8—C9—H9B | 109.0 |
C12—C1—C8 | 112.19 (15) | H9A—C9—H9B | 107.8 |
C3—C1—C8 | 120.51 (16) | C11—C10—C16 | 112.4 (2) |
C3—C2—C1 | 60.63 (13) | C11—C10—C9 | 108.36 (18) |
C3—C2—H2A | 117.7 | C16—C10—C9 | 112.22 (18) |
C1—C2—H2A | 117.7 | C11—C10—H10 | 107.9 |
C3—C2—H2B | 117.7 | C16—C10—H10 | 107.9 |
C1—C2—H2B | 117.7 | C9—C10—H10 | 107.9 |
H2A—C2—H2B | 114.8 | O1—C11—C10 | 106.89 (19) |
C2—C3—C4 | 116.9 (2) | O1—C11—C12 | 112.0 (2) |
C2—C3—C13 | 118.91 (19) | C10—C11—C12 | 112.53 (17) |
C4—C3—C13 | 112.6 (2) | O1—C11—H11 | 108.4 |
C2—C3—C1 | 60.18 (12) | C10—C11—H11 | 108.4 |
C4—C3—C1 | 118.90 (17) | C12—C11—H11 | 108.4 |
C13—C3—C1 | 119.91 (19) | C1—C12—C11 | 110.48 (17) |
C3—C4—C5 | 115.3 (2) | C1—C12—H12A | 109.6 |
C3—C4—H4A | 108.4 | C11—C12—H12A | 109.6 |
C5—C4—H4A | 108.4 | C1—C12—H12B | 109.6 |
C3—C4—H4B | 108.4 | C11—C12—H12B | 109.6 |
C5—C4—H4B | 108.4 | H12A—C12—H12B | 108.1 |
H4A—C4—H4B | 107.5 | C3—C13—H13A | 109.5 |
C4—C5—C6 | 113.0 (2) | C3—C13—H13B | 109.5 |
C4—C5—H5A | 109.0 | H13A—C13—H13B | 109.5 |
C6—C5—H5A | 109.0 | C3—C13—H13C | 109.5 |
C4—C5—H5B | 109.0 | H13A—C13—H13C | 109.5 |
C6—C5—H5B | 109.0 | H13B—C13—H13C | 109.5 |
H5A—C5—H5B | 107.8 | C7—C14—H14A | 109.5 |
C5—C6—C7 | 119.33 (18) | C7—C14—H14B | 109.5 |
C5—C6—H6A | 107.5 | H14A—C14—H14B | 109.5 |
C7—C6—H6A | 107.5 | C7—C14—H14C | 109.5 |
C5—C6—H6B | 107.5 | H14A—C14—H14C | 109.5 |
C7—C6—H6B | 107.5 | H14B—C14—H14C | 109.5 |
H6A—C6—H6B | 107.0 | C7—C15—H15A | 109.5 |
C14—C7—C6 | 108.64 (19) | C7—C15—H15B | 109.5 |
C14—C7—C15 | 108.0 (2) | H15A—C15—H15B | 109.5 |
C6—C7—C15 | 105.37 (16) | C7—C15—H15C | 109.5 |
C14—C7—C8 | 112.51 (17) | H15A—C15—H15C | 109.5 |
C6—C7—C8 | 112.38 (16) | H15B—C15—H15C | 109.5 |
C15—C7—C8 | 109.65 (16) | C10—C16—H16A | 109.5 |
C1—C8—C9 | 108.22 (15) | C10—C16—H16B | 109.5 |
C1—C8—C7 | 116.53 (15) | H16A—C16—H16B | 109.5 |
C9—C8—C7 | 112.05 (14) | C10—C16—H16C | 109.5 |
C1—C8—H8 | 106.5 | H16A—C16—H16C | 109.5 |
C9—C8—H8 | 106.5 | H16B—C16—H16C | 109.5 |
C7—C8—H8 | 106.5 | C11—O1—H1 | 109.5 |
C10—C9—C8 | 112.81 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O1i | 0.82 | 2.35 | 3.139 (3) | 163 |
Symmetry code: (i) x−1/2, −y+5/2, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O1i | 0.82 | 2.35 | 3.139 (3) | 163 |
Symmetry code: (i) x−1/2, −y+5/2, −z. |
Acknowledgements
We thank the National Center of Scientific and Technological Research (CNRST) which supports our scientific research.
References
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The essential oil of the Atlas cedar (Cedrus atlantica) consists mainly (50%) of a bicyclic hydrocarbon sesquiterpene called β-himachalene (El Jamili et al., 2002). The reactivity of this terpene and its derivatives has been studied extensively by our team in order to prepare new products having biological properties (Daoubi et al., 2004; Benharref et al. 2013; Ourhriss et al., 2013). In this work, We present the crystal structure of (1S, 3S,8R, 10R, 11R)-3,7,7,10-tetramethyltricyclo[6.4.0.01,3] dodec-11-ol. The molecule is built up from two fused six- and seven-membered rings and an additional three-membered ring (Fig. 1). The six-membered ring has a twist-boat conformation, as indicated by the total puckering amplitude QT = 0.783 (2) Å and spherical polar angle θ = 90.98 (15)° with ϕ = 334.28 (16)°, whereas the seven-membered ring displays a chair conformation with QT = 0.7646 (22) Å, θ2 = 32.19 (19), ϕ2 = 128.95 (34) and ϕ3 = 101.54 (20)° (Cremer & Pople, 1975). In the crystal structure, molecules are linked into chains (Fig. 2) running along the a axis by intermolecular O–H···O hydrogen bonds (Table 1).