organic compounds
5-Fluoro-3-phenyl-N′-(4-propylcyclohexylidene)-1H-indole-2-carbohydrazide
aDepartment of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey, bDepartment of Pharmaceutical Chemistry, Faculty of Pharmacy, Istanbul University, 34116 Beyazit, Istanbul, Turkey, and cDepartment of Physics, Faculty of Arts and Sciences, Ondokuz Mayıs University, 55139 Samsun, Turkey
*Correspondence e-mail: akkurt@erciyes.edu.tr
In the title compound, C24H26FN3O, the cyclohexane ring adopts a chair conformation; the propyl substituent is in an equatorial orientation and the bond-angle sum at the C atom bonded to the carbohydrazide N atom is 360.0°. The dihedral angle between the 1H-indole ring system and the phenyl ring is 82.77 (13)°. A weak intramolecular C—H⋯π contact occurs. In the crystal, pairs of molecules related by a crystallographic twofold axis are linked by bifurcated N—H⋯(O,N) hydrogen bonds; a C—H⋯O interaction occurs between the same pair. The dimers are linked by C—H⋯F and C—H⋯π interactions, generating a three-dimensional network.
Related literature
For the design and synthesis of indolylhydrazones and their et al. (2010, 2013); Cihan-Üstündağ & Çapan (2012). For puckering parameters, see: Cremer & Pople (1975).
products, spirothiazolidinones, as potential antituberculosis and anticancer agents, see: AkkurtExperimental
Crystal data
|
Data collection: X-AREA (Stoe & Cie, 2002); cell X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).
Supporting information
10.1107/S1600536813018333/hb7101sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813018333/hb7101Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813018333/hb7101Isup3.cml
A mixture of 5-fluoro-3-phenyl-1H-indole-2-carbohydrazide (0.005 mol) and 4-propyl cyclohexanone (0.007 mol) was refluxed in 15 ml ethanol for 5 h. The precipitate obtained was purified by recrystallization from an ethanol-water mixture to yield colourless prisms.
Yield: 78%, mp.: 446–447.5 K. IR(KBr): υmax 3366, 3243 (N—H), 1690 (C=O) cm-1. 1H-NMR (DMSO-d6/500 MHz): δ 0.78–0.88 (m and t, 4H, J= 7.3 Hz, 4-CH2CH2CH3, CH/CH2-cyc.*), 1.04–1.07 (m, 1H, CH/CH2-cyc.), 1.15 (br. d, 2H, J=6.3 Hz, 4-CH2CH2CH3-cyc.), 1.27 (br. quin, 2H, 4-CH2CH2CH3-cyc.), 1.47 (br. d, 2H,J=14.9 Hz, CH/CH2-cyc.), 1.59 (d, 1H, J=12.7 Hz, CH/CH2-cyc.), 1.70–1.88 (m, 2H, CH/CH2-cyc.), 2.13 (s, 1H, CH/CH2-cyc.), 2.30 (s, 1H, CH/CH2-cyc.), 7.12 (br. t, 2H, J=8.8 Hz, H4, H6-ind.), 7.42–7.50 (m, 6H, H7, 3-C6H5-ind.), 9.44 (s, 1H, CONH), 12.02 (s, 1H, NH) p.p.m.. 13C-NMR (Proton decoupled, DMSO-d6/100 MHz): δ 14.61 (4-CH2CH2CH3-cyc.), 20.05 (4-CH2CH2CH3-cyc.), 25.83 (CH2-cyc.), 32.00 (CH2-cyc.), 33.03 (CH2-cyc.), 34.43 (CH2-cyc.), 35.91 (CH-cyc.), 38.18 (4-CH2CH2CH3-cyc.), 105.02 (d, J=23.7 Hz, C4-ind.), 113.17 (d, J=26.0 Hz, C6-ind.), 114.28 (C7-ind.), 117.96 (C3-ind.), 127.36 (d, C3a-ind.), 127.89 (3-C6H5(C4)-ind.), 129.46 (3-C6H5(C3,C5)-ind.), 129.99 (C2-ind.), 130.53 (3-C6H5(C2,C6)-ind.), 132.79** (C7a-ind.), 133.72** (3-C6H5(C1)-ind.), 158.03 (C=N), 158.08 (d, J=233.6 Hz, C5-ind.), 161.94 (C=O) p.p.m.. MS (APCI+) m/z(%) 392 (MH+, 90). Analysis calculated for C24H26FN3O : C, 73.63; H, 6.69; N, 10.73%. Found: C, 73.43; H, 6.62; N, 10.51%.(*cyc.=cyclohexylidene, br.=broad, quin.=quintet, ind.=indole, ** interchangeable).
H atoms bonded to C atoms and the H atom (N1)H1 of the one of the two amide groups were positioned geometrically with C—H = 0.93 - 0.98 Å, and N—H = 0.86 Å and refined using a riding model with Uiso(H) = 1.2 or 1.5Ueq(C,N). The H atom (N2)H2A of the second groups were found in a difference Fourier map, restrained with N—H = 0.86 (2) Å and refined with Uiso = 1.2Ueq(N). The
was indeterminate in the present experiment.Data collection: X-AREA (Stoe & Cie, 2002); cell
X-AREA (Stoe & Cie, 2002); data reduction: X-RED32 (Stoe & Cie, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).Fig. 1. The molecular structure of (I) with displacement ellipsoids for non-H atoms drawn at the 30% probability level. | |
Fig. 2. View of the packing and hydrogen bondings of the title compound, down the [001]-axis. H atoms not participating in hydrogen bonding have been omitted for clarity. |
C24H26FN3O | Dx = 1.195 Mg m−3 |
Mr = 391.48 | Mo Kα radiation, λ = 0.71073 Å |
Tetragonal, I4 | Cell parameters from 20884 reflections |
Hall symbol: I -4 | θ = 2.5–27.4° |
a = 22.6986 (11) Å | µ = 0.08 mm−1 |
c = 8.4480 (5) Å | T = 296 K |
V = 4352.6 (5) Å3 | Prism, colourless |
Z = 8 | 0.63 × 0.46 × 0.28 mm |
F(000) = 1664 |
Stoe IPDS 2 diffractometer | 4531 independent reflections |
Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus | 3430 reflections with I > 2σ(I) |
Plane graphite monochromator | Rint = 0.066 |
Detector resolution: 6.67 pixels mm-1 | θmax = 26.5°, θmin = 2.5° |
ω–scans | h = −28→27 |
Absorption correction: integration (Stoe & Cie, 2002) | k = −28→28 |
Tmin = 0.957, Tmax = 0.978 | l = −10→10 |
15640 measured reflections |
Refinement on F2 | 2 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.092 | W = 1/[Σ2(FO2) + (0.0396P)2 + 0.3772P] WHERE P = (FO2 + 2FC2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
4531 reflections | Δρmax = 0.13 e Å−3 |
267 parameters | Δρmin = −0.11 e Å−3 |
C24H26FN3O | Z = 8 |
Mr = 391.48 | Mo Kα radiation |
Tetragonal, I4 | µ = 0.08 mm−1 |
a = 22.6986 (11) Å | T = 296 K |
c = 8.4480 (5) Å | 0.63 × 0.46 × 0.28 mm |
V = 4352.6 (5) Å3 |
Stoe IPDS 2 diffractometer | 4531 independent reflections |
Absorption correction: integration (Stoe & Cie, 2002) | 3430 reflections with I > 2σ(I) |
Tmin = 0.957, Tmax = 0.978 | Rint = 0.066 |
15640 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 2 restraints |
wR(F2) = 0.092 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.13 e Å−3 |
4531 reflections | Δρmin = −0.11 e Å−3 |
267 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | 0.95641 (9) | 0.05822 (8) | 0.6774 (3) | 0.0742 (7) | |
O1 | 0.77085 (10) | 0.26762 (14) | 0.0944 (4) | 0.1013 (11) | |
N1 | 0.80598 (10) | 0.18855 (10) | 0.3230 (3) | 0.0513 (8) | |
N2 | 0.84810 (11) | 0.24602 (12) | −0.0590 (3) | 0.0588 (9) | |
N3 | 0.83121 (11) | 0.28546 (12) | −0.1750 (3) | 0.0608 (9) | |
C1 | 0.83656 (11) | 0.15385 (12) | 0.4270 (4) | 0.0476 (9) | |
C2 | 0.82036 (14) | 0.13032 (13) | 0.5733 (4) | 0.0587 (10) | |
C3 | 0.86172 (14) | 0.09835 (13) | 0.6542 (4) | 0.0605 (11) | |
C4 | 0.91761 (14) | 0.09077 (12) | 0.5911 (4) | 0.0559 (10) | |
C5 | 0.93519 (12) | 0.11312 (12) | 0.4498 (4) | 0.0507 (9) | |
C6 | 0.89358 (11) | 0.14621 (11) | 0.3643 (3) | 0.0432 (8) | |
C7 | 0.89623 (11) | 0.17781 (11) | 0.2192 (3) | 0.0428 (8) | |
C8 | 0.94986 (11) | 0.18498 (11) | 0.1185 (3) | 0.0443 (9) | |
C9 | 0.96716 (13) | 0.14270 (14) | 0.0110 (4) | 0.0584 (11) | |
C10 | 1.01697 (14) | 0.15077 (16) | −0.0816 (4) | 0.0665 (11) | |
C11 | 1.05025 (13) | 0.20044 (16) | −0.0662 (4) | 0.0667 (11) | |
C12 | 1.03435 (15) | 0.24189 (17) | 0.0407 (5) | 0.0777 (14) | |
C13 | 0.98449 (13) | 0.23467 (14) | 0.1336 (4) | 0.0634 (11) | |
C14 | 0.84140 (11) | 0.20304 (11) | 0.1986 (3) | 0.0465 (9) | |
C15 | 0.81674 (12) | 0.24211 (14) | 0.0752 (4) | 0.0566 (10) | |
C16 | 0.86492 (14) | 0.29068 (14) | −0.2948 (4) | 0.0592 (11) | |
C17 | 0.92192 (15) | 0.26047 (14) | −0.3283 (4) | 0.0687 (11) | |
C18 | 0.97104 (15) | 0.30538 (16) | −0.3529 (4) | 0.0723 (12) | |
C19 | 0.95600 (16) | 0.35201 (15) | −0.4750 (4) | 0.0673 (11) | |
C20 | 0.89727 (17) | 0.38012 (17) | −0.4386 (5) | 0.0780 (12) | |
C21 | 0.84788 (16) | 0.33486 (19) | −0.4175 (5) | 0.0830 (14) | |
C22 | 1.0046 (2) | 0.3974 (2) | −0.4948 (5) | 0.0937 (16) | |
C23 | 1.0627 (2) | 0.3747 (3) | −0.5558 (8) | 0.131 (3) | |
C24 | 1.1078 (3) | 0.4215 (4) | −0.5818 (8) | 0.169 (4) | |
H1 | 0.77000 | 0.19950 | 0.33440 | 0.0620* | |
H2 | 0.78280 | 0.13620 | 0.61440 | 0.0700* | |
H2A | 0.8751 (11) | 0.2227 (12) | −0.060 (3) | 0.060 (9)* | |
H3 | 0.85230 | 0.08170 | 0.75150 | 0.0730* | |
H5 | 0.97300 | 0.10680 | 0.41120 | 0.0610* | |
H9 | 0.94520 | 0.10830 | 0.00050 | 0.0700* | |
H10 | 1.02770 | 0.12210 | −0.15470 | 0.0800* | |
H11 | 1.08360 | 0.20580 | −0.12860 | 0.0800* | |
H12 | 1.05710 | 0.27570 | 0.05200 | 0.0930* | |
H13 | 0.97430 | 0.26350 | 0.20680 | 0.0760* | |
H17A | 0.91790 | 0.23630 | −0.42240 | 0.0830* | |
H17B | 0.93190 | 0.23480 | −0.24040 | 0.0830* | |
H18A | 0.97950 | 0.32450 | −0.25280 | 0.0870* | |
H18B | 1.00640 | 0.28490 | −0.38620 | 0.0870* | |
H19 | 0.95180 | 0.33180 | −0.57680 | 0.0810* | |
H20A | 0.88690 | 0.40670 | −0.52400 | 0.0930* | |
H20B | 0.90080 | 0.40320 | −0.34250 | 0.0930* | |
H21A | 0.81190 | 0.35470 | −0.38560 | 0.1000* | |
H21B | 0.84050 | 0.31500 | −0.51730 | 0.1000* | |
H22A | 0.99070 | 0.42770 | −0.56670 | 0.1130* | |
H22B | 1.01140 | 0.41600 | −0.39310 | 0.1130* | |
H23A | 1.07820 | 0.34630 | −0.48090 | 0.1570* | |
H23B | 1.05600 | 0.35430 | −0.65500 | 0.1570* | |
H24A | 1.11610 | 0.44090 | −0.48330 | 0.2030* | |
H24B | 1.09310 | 0.44970 | −0.65680 | 0.2030* | |
H24C | 1.14330 | 0.40400 | −0.62200 | 0.2030* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0820 (13) | 0.0652 (11) | 0.0755 (13) | 0.0059 (9) | −0.0167 (10) | 0.0183 (10) |
O1 | 0.0639 (15) | 0.135 (2) | 0.105 (2) | 0.0507 (15) | 0.0263 (15) | 0.0539 (19) |
N1 | 0.0347 (11) | 0.0569 (14) | 0.0623 (15) | 0.0076 (10) | 0.0116 (11) | 0.0062 (12) |
N2 | 0.0488 (14) | 0.0670 (16) | 0.0605 (16) | 0.0165 (13) | −0.0026 (13) | 0.0149 (14) |
N3 | 0.0486 (13) | 0.0740 (17) | 0.0599 (16) | 0.0073 (12) | −0.0061 (14) | 0.0195 (14) |
C1 | 0.0434 (14) | 0.0435 (14) | 0.0558 (17) | 0.0010 (11) | 0.0067 (14) | −0.0004 (14) |
C2 | 0.0553 (17) | 0.0578 (17) | 0.0630 (19) | 0.0022 (14) | 0.0196 (16) | 0.0060 (16) |
C3 | 0.074 (2) | 0.0535 (17) | 0.0540 (18) | −0.0014 (15) | 0.0104 (17) | 0.0073 (15) |
C4 | 0.0631 (19) | 0.0438 (16) | 0.0609 (19) | 0.0019 (13) | −0.0076 (16) | 0.0050 (15) |
C5 | 0.0426 (14) | 0.0480 (15) | 0.0616 (18) | 0.0028 (12) | −0.0002 (14) | 0.0011 (14) |
C6 | 0.0405 (14) | 0.0390 (13) | 0.0502 (15) | 0.0013 (11) | 0.0035 (12) | −0.0029 (12) |
C7 | 0.0364 (13) | 0.0437 (14) | 0.0483 (16) | 0.0026 (11) | 0.0025 (12) | −0.0005 (12) |
C8 | 0.0336 (13) | 0.0507 (15) | 0.0487 (17) | 0.0053 (11) | −0.0003 (12) | 0.0087 (13) |
C9 | 0.0444 (16) | 0.0658 (19) | 0.065 (2) | −0.0009 (14) | 0.0054 (15) | −0.0084 (16) |
C10 | 0.0536 (18) | 0.084 (2) | 0.062 (2) | 0.0113 (16) | 0.0098 (16) | −0.0081 (18) |
C11 | 0.0432 (16) | 0.087 (2) | 0.070 (2) | 0.0038 (16) | 0.0174 (16) | 0.014 (2) |
C12 | 0.060 (2) | 0.066 (2) | 0.107 (3) | −0.0134 (17) | 0.020 (2) | 0.013 (2) |
C13 | 0.0551 (18) | 0.0540 (17) | 0.081 (2) | −0.0016 (14) | 0.0174 (17) | −0.0034 (16) |
C14 | 0.0390 (14) | 0.0482 (15) | 0.0523 (16) | 0.0023 (12) | 0.0038 (13) | 0.0020 (13) |
C15 | 0.0379 (14) | 0.0648 (18) | 0.067 (2) | 0.0075 (13) | 0.0065 (15) | 0.0128 (16) |
C16 | 0.0519 (17) | 0.0660 (19) | 0.0596 (19) | −0.0019 (15) | −0.0097 (16) | 0.0107 (16) |
C17 | 0.078 (2) | 0.0631 (19) | 0.065 (2) | 0.0053 (16) | 0.0121 (18) | 0.0046 (18) |
C18 | 0.060 (2) | 0.088 (2) | 0.069 (2) | 0.0106 (17) | 0.0040 (18) | 0.015 (2) |
C19 | 0.070 (2) | 0.075 (2) | 0.0570 (19) | −0.0035 (17) | 0.0010 (16) | 0.0060 (17) |
C20 | 0.085 (2) | 0.079 (2) | 0.070 (2) | 0.0109 (19) | 0.002 (2) | 0.024 (2) |
C21 | 0.064 (2) | 0.109 (3) | 0.076 (2) | 0.0032 (19) | −0.0066 (19) | 0.034 (2) |
C22 | 0.095 (3) | 0.109 (3) | 0.077 (2) | −0.022 (2) | −0.005 (2) | 0.022 (2) |
C23 | 0.084 (3) | 0.169 (5) | 0.139 (5) | −0.026 (3) | 0.007 (3) | 0.047 (4) |
C24 | 0.113 (4) | 0.272 (9) | 0.122 (5) | −0.080 (5) | −0.013 (4) | 0.074 (5) |
F1—C4 | 1.361 (4) | C19—C22 | 1.519 (6) |
O1—C15 | 1.203 (4) | C19—C20 | 1.510 (5) |
N1—C1 | 1.369 (4) | C20—C21 | 1.531 (6) |
N1—C14 | 1.364 (4) | C22—C23 | 1.507 (7) |
N2—N3 | 1.382 (4) | C23—C24 | 1.492 (10) |
N2—C15 | 1.342 (4) | C2—H2 | 0.9300 |
N3—C16 | 1.274 (4) | C3—H3 | 0.9300 |
N1—H1 | 0.8600 | C5—H5 | 0.9300 |
N2—H2A | 0.81 (3) | C9—H9 | 0.9300 |
C1—C2 | 1.396 (5) | C10—H10 | 0.9300 |
C1—C6 | 1.409 (4) | C11—H11 | 0.9300 |
C2—C3 | 1.369 (4) | C12—H12 | 0.9300 |
C3—C4 | 1.387 (5) | C13—H13 | 0.9300 |
C4—C5 | 1.357 (5) | C17—H17A | 0.9700 |
C5—C6 | 1.406 (4) | C17—H17B | 0.9700 |
C6—C7 | 1.422 (4) | C18—H18A | 0.9700 |
C7—C8 | 1.494 (4) | C18—H18B | 0.9700 |
C7—C14 | 1.381 (4) | C19—H19 | 0.9800 |
C8—C9 | 1.378 (4) | C20—H20A | 0.9700 |
C8—C13 | 1.381 (4) | C20—H20B | 0.9700 |
C9—C10 | 1.387 (4) | C21—H21A | 0.9700 |
C10—C11 | 1.363 (5) | C21—H21B | 0.9700 |
C11—C12 | 1.353 (5) | C22—H22A | 0.9700 |
C12—C13 | 1.387 (5) | C22—H22B | 0.9700 |
C14—C15 | 1.479 (4) | C23—H23A | 0.9700 |
C16—C21 | 1.493 (5) | C23—H23B | 0.9700 |
C16—C17 | 1.491 (5) | C24—H24A | 0.9600 |
C17—C18 | 1.525 (5) | C24—H24B | 0.9600 |
C18—C19 | 1.517 (5) | C24—H24C | 0.9600 |
C1—N1—C14 | 109.5 (2) | C4—C5—H5 | 122.00 |
N3—N2—C15 | 119.7 (3) | C6—C5—H5 | 121.00 |
N2—N3—C16 | 117.2 (3) | C8—C9—H9 | 120.00 |
C1—N1—H1 | 125.00 | C10—C9—H9 | 120.00 |
C14—N1—H1 | 125.00 | C9—C10—H10 | 120.00 |
N3—N2—H2A | 128.8 (18) | C11—C10—H10 | 120.00 |
C15—N2—H2A | 111.5 (18) | C10—C11—H11 | 120.00 |
N1—C1—C6 | 107.2 (3) | C12—C11—H11 | 120.00 |
C2—C1—C6 | 121.9 (3) | C11—C12—H12 | 120.00 |
N1—C1—C2 | 130.9 (3) | C13—C12—H12 | 120.00 |
C1—C2—C3 | 117.7 (3) | C8—C13—H13 | 120.00 |
C2—C3—C4 | 120.1 (3) | C12—C13—H13 | 120.00 |
F1—C4—C3 | 117.0 (3) | C16—C17—H17A | 110.00 |
C3—C4—C5 | 124.1 (3) | C16—C17—H17B | 109.00 |
F1—C4—C5 | 118.9 (3) | C18—C17—H17A | 110.00 |
C4—C5—C6 | 117.0 (3) | C18—C17—H17B | 110.00 |
C1—C6—C5 | 119.3 (3) | H17A—C17—H17B | 108.00 |
C5—C6—C7 | 133.2 (2) | C17—C18—H18A | 109.00 |
C1—C6—C7 | 107.5 (2) | C17—C18—H18B | 109.00 |
C6—C7—C14 | 106.3 (2) | C19—C18—H18A | 109.00 |
C8—C7—C14 | 128.1 (2) | C19—C18—H18B | 109.00 |
C6—C7—C8 | 125.5 (2) | H18A—C18—H18B | 108.00 |
C7—C8—C13 | 120.0 (2) | C18—C19—H19 | 107.00 |
C9—C8—C13 | 117.9 (3) | C20—C19—H19 | 107.00 |
C7—C8—C9 | 122.1 (2) | C22—C19—H19 | 107.00 |
C8—C9—C10 | 120.8 (3) | C19—C20—H20A | 109.00 |
C9—C10—C11 | 120.5 (3) | C19—C20—H20B | 109.00 |
C10—C11—C12 | 119.4 (3) | C21—C20—H20A | 109.00 |
C11—C12—C13 | 120.9 (3) | C21—C20—H20B | 109.00 |
C8—C13—C12 | 120.6 (3) | H20A—C20—H20B | 108.00 |
N1—C14—C15 | 117.7 (2) | C16—C21—H21A | 110.00 |
C7—C14—C15 | 132.7 (2) | C16—C21—H21B | 110.00 |
N1—C14—C7 | 109.5 (2) | C20—C21—H21A | 110.00 |
N2—C15—C14 | 115.8 (2) | C20—C21—H21B | 110.00 |
O1—C15—N2 | 122.8 (3) | H21A—C21—H21B | 108.00 |
O1—C15—C14 | 121.4 (3) | C19—C22—H22A | 108.00 |
N3—C16—C21 | 117.3 (3) | C19—C22—H22B | 108.00 |
C17—C16—C21 | 113.7 (3) | C23—C22—H22A | 108.00 |
N3—C16—C17 | 129.0 (3) | C23—C22—H22B | 108.00 |
C16—C17—C18 | 110.7 (3) | H22A—C22—H22B | 107.00 |
C17—C18—C19 | 113.2 (3) | C22—C23—H23A | 109.00 |
C18—C19—C20 | 110.8 (3) | C22—C23—H23B | 109.00 |
C18—C19—C22 | 112.6 (3) | C24—C23—H23A | 109.00 |
C20—C19—C22 | 112.2 (3) | C24—C23—H23B | 109.00 |
C19—C20—C21 | 112.8 (3) | H23A—C23—H23B | 108.00 |
C16—C21—C20 | 110.0 (3) | C23—C24—H24A | 109.00 |
C19—C22—C23 | 116.2 (4) | C23—C24—H24B | 109.00 |
C22—C23—C24 | 114.1 (6) | C23—C24—H24C | 109.00 |
C1—C2—H2 | 121.00 | H24A—C24—H24B | 110.00 |
C3—C2—H2 | 121.00 | H24A—C24—H24C | 109.00 |
C2—C3—H3 | 120.00 | H24B—C24—H24C | 110.00 |
C4—C3—H3 | 120.00 | ||
C1—N1—C14—C15 | −178.2 (2) | C14—C7—C8—C13 | 79.6 (4) |
C14—N1—C1—C2 | 176.9 (3) | C14—C7—C8—C9 | −101.6 (3) |
C14—N1—C1—C6 | −0.2 (3) | C8—C7—C14—C15 | 2.2 (5) |
C1—N1—C14—C7 | 0.0 (3) | C6—C7—C8—C13 | −95.4 (3) |
C15—N2—N3—C16 | 174.8 (3) | C9—C8—C13—C12 | 1.3 (5) |
N3—N2—C15—O1 | 7.1 (5) | C7—C8—C13—C12 | −179.9 (3) |
N3—N2—C15—C14 | −174.2 (2) | C7—C8—C9—C10 | 179.6 (3) |
N2—N3—C16—C21 | −177.8 (3) | C13—C8—C9—C10 | −1.6 (4) |
N2—N3—C16—C17 | −1.1 (5) | C8—C9—C10—C11 | 1.0 (5) |
C2—C1—C6—C7 | −177.2 (3) | C9—C10—C11—C12 | 0.2 (5) |
N1—C1—C2—C3 | −177.8 (3) | C10—C11—C12—C13 | −0.5 (5) |
C6—C1—C2—C3 | −1.0 (4) | C11—C12—C13—C8 | −0.2 (5) |
N1—C1—C6—C7 | 0.3 (3) | N1—C14—C15—N2 | −167.4 (3) |
C2—C1—C6—C5 | 1.1 (4) | C7—C14—C15—O1 | −166.4 (3) |
N1—C1—C6—C5 | 178.6 (2) | C7—C14—C15—N2 | 14.9 (5) |
C1—C2—C3—C4 | 0.6 (4) | N1—C14—C15—O1 | 11.3 (4) |
C2—C3—C4—F1 | −179.6 (3) | N3—C16—C17—C18 | −122.2 (4) |
C2—C3—C4—C5 | −0.3 (5) | C21—C16—C17—C18 | 54.6 (4) |
C3—C4—C5—C6 | 0.4 (4) | N3—C16—C21—C20 | 121.6 (3) |
F1—C4—C5—C6 | 179.7 (2) | C17—C16—C21—C20 | −55.6 (4) |
C4—C5—C6—C7 | 177.0 (3) | C16—C17—C18—C19 | −52.3 (4) |
C4—C5—C6—C1 | −0.8 (4) | C17—C18—C19—C20 | 51.8 (4) |
C5—C6—C7—C8 | −2.3 (5) | C17—C18—C19—C22 | 178.4 (3) |
C1—C6—C7—C14 | −0.2 (3) | C18—C19—C20—C21 | −52.9 (4) |
C5—C6—C7—C14 | −178.2 (3) | C22—C19—C20—C21 | −179.7 (3) |
C1—C6—C7—C8 | 175.7 (2) | C18—C19—C22—C23 | 63.2 (5) |
C6—C7—C14—N1 | 0.1 (3) | C20—C19—C22—C23 | −170.9 (4) |
C6—C7—C8—C9 | 83.4 (4) | C19—C20—C21—C16 | 54.5 (4) |
C6—C7—C14—C15 | 178.0 (3) | C19—C22—C23—C24 | 176.7 (5) |
C8—C7—C14—N1 | −175.6 (2) |
Cg1, Cg2 and Cg3 are the centroids of the 1H-pyrrole (N1/C1/C6/C7/C14), benzene (C1–C6) and phenyl (C8–C13) rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.86 | 2.50 | 3.048 (4) | 123 |
N1—H1···N3i | 0.86 | 2.32 | 3.170 (3) | 168 |
C2—H2···O1i | 0.93 | 2.51 | 3.112 (4) | 123 |
C5—H5···F1ii | 0.93 | 2.52 | 3.383 (3) | 154 |
C3—H3···Cg3iii | 0.93 | 2.82 | 3.708 (3) | 160 |
C11—H11···Cg1iv | 0.93 | 2.89 | 3.683 (3) | 144 |
C17—H17A···Cg2v | 0.97 | 2.81 | 3.571 (3) | 136 |
C17—H17B···Cg3 | 0.97 | 2.90 | 3.810 (4) | 157 |
Symmetry codes: (i) −x+3/2, −y+1/2, z+1/2; (ii) y+1, −x+1, −z+1; (iii) −y+1, x−1, −z+1; (iv) y+1, −x+1, −z; (v) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | C24H26FN3O |
Mr | 391.48 |
Crystal system, space group | Tetragonal, I4 |
Temperature (K) | 296 |
a, c (Å) | 22.6986 (11), 8.4480 (5) |
V (Å3) | 4352.6 (5) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.63 × 0.46 × 0.28 |
Data collection | |
Diffractometer | Stoe IPDS 2 diffractometer |
Absorption correction | Integration (Stoe & Cie, 2002) |
Tmin, Tmax | 0.957, 0.978 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15640, 4531, 3430 |
Rint | 0.066 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.092, 1.03 |
No. of reflections | 4531 |
No. of parameters | 267 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.13, −0.11 |
Computer programs: X-AREA (Stoe & Cie, 2002), X-RED32 (Stoe & Cie, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), WinGX (Farrugia, 2012).
Cg1, Cg2 and Cg3 are the centroids of the 1H-pyrrole (N1/C1/C6/C7/C14), benzene (C1–C6) and phenyl (C8–C13) rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.86 | 2.50 | 3.048 (4) | 123 |
N1—H1···N3i | 0.86 | 2.32 | 3.170 (3) | 168 |
C2—H2···O1i | 0.93 | 2.51 | 3.112 (4) | 123 |
C5—H5···F1ii | 0.93 | 2.52 | 3.383 (3) | 154 |
C3—H3···Cg3iii | 0.93 | 2.82 | 3.708 (3) | 160 |
C11—H11···Cg1iv | 0.93 | 2.89 | 3.683 (3) | 144 |
C17—H17A···Cg2v | 0.97 | 2.81 | 3.571 (3) | 136 |
C17—H17B···Cg3 | 0.97 | 2.90 | 3.810 (4) | 157 |
Symmetry codes: (i) −x+3/2, −y+1/2, z+1/2; (ii) y+1, −x+1, −z+1; (iii) −y+1, x−1, −z+1; (iv) y+1, −x+1, −z; (v) x, y, z−1. |
Acknowledgements
The authors acknowledge the Faculty of Arts and Sciences, Ondokuz Mayıs University, Turkey, for the use of the Stoe IPDS 2 diffractometer (purchased under grant F.279 of the University Research Fund). This work was supported by the Scientific Research Projects Unit of İstanbul University (project No. T-471/25062004).
References
Akkurt, M., Çelik, Í., Cihan, G., Çapan, G. & Büyükgüngör, O. (2010). Acta Cryst. E66, o830. Web of Science CSD CrossRef IUCr Journals Google Scholar
Akkurt, M., Zopun, M., Çapan, G. & Büyükgüngör, O. (2013). Acta Cryst. E69, o1137. CSD CrossRef IUCr Journals Google Scholar
Cihan-Üstündağ, G. & Çapan, G. (2012). Mol. Divers. 16, 525–539. Web of Science PubMed Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Stoe & Cie (2002). X-AREA and X-RED32. Stoe & Cie, Darmstadt, Germany. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Recently our work has been focused on the design and synthesis of novel indolylhydrazones and their cyclization products spirothiazolidinones as potential antituberculosis and anticancer agents (Akkurt et al., 2010, 2013; Cihan-Üstündağ & Çapan, 2012). Within this context, we here report the synthesis and crystal structure of the title compound.
As shown in Fig. 1, the (C16–C21) cyclohexane ring of the title compound adopts a chair conformation with the puckering parameters of Q(T) = 0.540 (4) Å, θ = 176.6 (4) ° and ϕ = 129 (12) °. The 1H-indole ring system makes a dihedral angle of 82.77 (13) ° with the C8–C13 phenyl ring. The N1–C14–C15–O1, N1–C14–C15–N2, C14–C15–N2–N3, C15–N2–N3–C16, N2–N3–C16–C17 and C19–C22–C23–C24 torsion angles are 11.3 (4), -167.4 (3), 174.2 (2), 174.8 (3), -1.1 (5) and 176.7 (5) °, respectively.
In the crystal, molecules are linked by N—H···O, N—H···N, C—H···O, C—H···F hydrogen bonds, forming layers parallel to the (110) plane (Table 1, Fig. 2). In addition, C—H···π interactions also contribute to the cohesion of the crystal packing.