organic compounds
7-Benzyl-3-methyl-6-phenylimidazo[2,1-b][1,3]thiazol-7-ium chloride 0.75-hydrate
aSchool of Chemistry and Chemical Engineering, Yunnan Normal University, Knuming 650050, People's Republic of China
*Correspondence e-mail: hgli2005@126.com
Theasymmetric unit of the title salt, C19H17N2S+·Cl−·0.75H2O, contains two symmetrically independent formula units of the carbenium salt along with three water molecules. The water molecules are only 50% occupated, and one of them is positioned in a hydrophobic pocket not forming any hydrogen bonds. The conformation of the independent cations is very similar, with dihedral angles of 61.0 (2) and 61.5 (3)° between the benzene rings. They form quasi-centrosymmetric couples via π–π stacking interactions between the benzene and imidazo[2,1-b]thiazole rings [centroid–centroid distances = 3.718 (3) and 3.663 (3) Å]. In the crystal, O—H⋯Cl hydrogen bonds lead to the formation of a helical anion–water chain along the c-axis direction. The cations connect to the anion–water chain through C—H⋯Cl interactions, generating a three-dimensional supramolecular network. O—H⋯S hydrogen bonds and C—H⋯O interactions also occur.
Related literature
For applications in catalysis of abnormal N-heterocyclic see: Mattson et al. (2006); Liu et al. (2008); Padmanaban et al. (2011). For related structures, see: Huang et al. (2011); Akkurt et al. (2011, 2007); Song et al. (2008).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536813018795/ld2101sup1.cif
contains datablocks I, New_Global_Publ_Block. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813018795/ld2101Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813018795/ld2101Isup3.tif
Supporting information file. DOI: 10.1107/S1600536813018795/ld2101Isup4.tif
Supporting information file. DOI: 10.1107/S1600536813018795/ld2101Isup5.tif
A mixture of 3-methyl-6-phenylimidazo[2,1-b]thiazole (1.071 g, 5.0 mmol) and benzyl chorlide (0.759 g, 6.0 mmol,1.2 equiv) was dissolved in CH3CN, and stirred under reflux for 12 h. The solvent was then removed under vacuum. The white solids obtained were washed with diethyl ether and the crude product was re-crystallized from chloroform / toluene. The yield was 1.45 g, 85%. 1H NMR (δ, 300 MHz, CDCl3): 8.35 (s, 1H), 7.71–7.68 (m, 2H), 7.54–7.52 (m, 3H), 7.41–7.29 (m, 6H), 5.53 (s, 2H), 2.64 (d, J = 1.2 Hz, 3H); 13 C NMR (δ, 75 MHz, CDCl3) 146.9, 140.3, 131.0, 130.8, 130.7, 130.1, 129.8, 129.4, 129.3, 129.1, 125.2, 114.4, 112.3, 51.5, 13.0.
All H atoms attached to carbons were geometrically fixed and allowed to ride on the corresponding non-H atom with C—H = 0.96 Å, and Uiso(H) = 1.5Ueq(C) of the attached C atom for methyl H atoms and 1.2Ueq(C) for other H atoms. Positions of the methyl atoms were optimized rotationally. The water H atoms were located from a Fourier map and their distances were constrained to 0.86 Å and the Uiso(H) = 1.5Ueq(O).
Data collection: SMART (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I), with atom labels and 30% probability displacement ellipsoids. | |
Fig. 2. The pi···pi stacking between two symmetrically independent cations. | |
Fig. 3. The hydrogen bonded helical anion-water chain and the hydrogen bonding between Cl- ion and the cations. |
C19H17N2S+·Cl−·0.75H2O | Dx = 1.195 Mg m−3 |
Mr = 354.37 | Mo Kα radiation, λ = 0.71073 Å |
Trigonal, P32 | Cell parameters from 25 reflections |
Hall symbol: P 32 | θ = 1.8–26.0° |
a = 13.211 (1) Å | µ = 0.31 mm−1 |
c = 19.555 (3) Å | T = 291 K |
V = 2955.7 (6) Å3 | Block, colourless |
Z = 6 | 0.28 × 0.24 × 0.22 mm |
F(000) = 1113 |
Bruker SMART APEX CCD diffractometer | 6594 independent reflections |
Radiation source: fine-focus sealed tube | 4827 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.053 |
phi and ω scans | θmax = 26.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −16→13 |
Tmin = 0.919, Tmax = 0.936 | k = −14→16 |
16250 measured reflections | l = −24→16 |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.060 | w = 1/[σ2(Fo2) + (0.0606P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.123 | (Δ/σ)max < 0.001 |
S = 1.00 | Δρmax = 0.30 e Å−3 |
6594 reflections | Δρmin = −0.28 e Å−3 |
476 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
15 restraints | Extinction coefficient: 0.0045 (7) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983) |
Secondary atom site location: difference Fourier map | Absolute structure parameter: 0.04 (7) |
C19H17N2S+·Cl−·0.75H2O | Z = 6 |
Mr = 354.37 | Mo Kα radiation |
Trigonal, P32 | µ = 0.31 mm−1 |
a = 13.211 (1) Å | T = 291 K |
c = 19.555 (3) Å | 0.28 × 0.24 × 0.22 mm |
V = 2955.7 (6) Å3 |
Bruker SMART APEX CCD diffractometer | 6594 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | 4827 reflections with I > 2σ(I) |
Tmin = 0.919, Tmax = 0.936 | Rint = 0.053 |
16250 measured reflections |
R[F2 > 2σ(F2)] = 0.060 | H-atom parameters constrained |
wR(F2) = 0.123 | Δρmax = 0.30 e Å−3 |
S = 1.00 | Δρmin = −0.28 e Å−3 |
6594 reflections | Absolute structure: Flack (1983) |
476 parameters | Absolute structure parameter: 0.04 (7) |
15 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.4467 (3) | 0.4753 (4) | 0.1467 (2) | 0.0415 (10) | |
C2 | 0.4721 (4) | 0.4083 (4) | 0.1030 (3) | 0.0456 (11) | |
H2 | 0.5182 | 0.3774 | 0.1174 | 0.09 (2)* | |
C3 | 0.4258 (4) | 0.3880 (4) | 0.0358 (3) | 0.0523 (12) | |
H3 | 0.4434 | 0.3455 | 0.0049 | 0.068 (17)* | |
C4 | 0.3542 (4) | 0.4317 (4) | 0.0161 (3) | 0.0517 (12) | |
H4 | 0.3223 | 0.4168 | −0.0276 | 0.035 (11)* | |
C5 | 0.3301 (4) | 0.4974 (4) | 0.0613 (2) | 0.0464 (11) | |
H5 | 0.2827 | 0.5270 | 0.0474 | 0.039 (12)* | |
C6 | 0.3763 (3) | 0.5200 (4) | 0.1282 (2) | 0.0437 (10) | |
H6 | 0.3597 | 0.5636 | 0.1588 | 0.073 (17)* | |
C7 | 0.4878 (4) | 0.4879 (4) | 0.2189 (2) | 0.0454 (11) | |
C8 | 0.4919 (4) | 0.4010 (4) | 0.2554 (3) | 0.0457 (11) | |
H8 | 0.4673 | 0.3255 | 0.2403 | 0.040 (12)* | |
C9 | 0.5679 (4) | 0.4122 (4) | 0.3779 (3) | 0.0441 (10) | |
C10 | 0.6201 (4) | 0.5055 (4) | 0.4246 (3) | 0.0436 (10) | |
H10 | 0.6468 | 0.4985 | 0.4674 | 0.08 (2)* | |
C11 | 0.5674 (4) | 0.5640 (4) | 0.3202 (3) | 0.0527 (12) | |
C12 | 0.5438 (4) | 0.2894 (4) | 0.3879 (3) | 0.0521 (12) | |
H12A | 0.4609 | 0.2366 | 0.3882 | 0.069 (17)* | |
H12B | 0.5765 | 0.2840 | 0.4307 | 0.047 (13)* | |
H12C | 0.5787 | 0.2690 | 0.3513 | 0.12 (3)* | |
C13 | 0.5599 (4) | 0.7050 (4) | 0.2358 (3) | 0.0517 (13) | |
H13A | 0.5181 | 0.7308 | 0.2653 | 0.051 (14)* | |
H13B | 0.5305 | 0.6991 | 0.1897 | 0.057 (15)* | |
C14 | 0.6892 (4) | 0.7956 (4) | 0.2372 (2) | 0.0466 (11) | |
C15 | 0.7271 (4) | 0.8950 (4) | 0.2777 (3) | 0.0501 (12) | |
H15 | 0.6742 | 0.9077 | 0.3022 | 0.075 (18)* | |
C16 | 0.8460 (4) | 0.9743 (4) | 0.2803 (3) | 0.0566 (14) | |
H16 | 0.8730 | 1.0408 | 0.3073 | 0.068 (17)* | |
C17 | 0.9239 (4) | 0.9570 (4) | 0.2442 (3) | 0.0577 (13) | |
H17 | 1.0033 | 1.0116 | 0.2460 | 0.077 (18)* | |
C18 | 0.8834 (5) | 0.8563 (5) | 0.2042 (3) | 0.0560 (13) | |
H18 | 0.9361 | 0.8432 | 0.1795 | 0.10 (2)* | |
C19 | 0.7675 (4) | 0.7778 (4) | 0.2014 (2) | 0.0510 (11) | |
H19 | 0.7411 | 0.7110 | 0.1747 | 0.043 (12)* | |
C20 | 0.2128 (4) | 0.2665 (4) | 0.3611 (2) | 0.0458 (10) | |
H20 | 0.1764 | 0.1878 | 0.3495 | 0.072 (17)* | |
C21 | 0.2639 (4) | 0.3027 (4) | 0.4241 (3) | 0.0495 (11) | |
H21 | 0.2614 | 0.2479 | 0.4549 | 0.046 (13)* | |
C22 | 0.3199 (4) | 0.4213 (4) | 0.4430 (2) | 0.0425 (10) | |
H22 | 0.3551 | 0.4450 | 0.4857 | 0.078 (19)* | |
C23 | 0.3219 (3) | 0.5016 (4) | 0.3973 (2) | 0.0393 (9) | |
H23 | 0.3570 | 0.5800 | 0.4096 | 0.072 (17)* | |
C24 | 0.2720 (4) | 0.4666 (4) | 0.3328 (2) | 0.0456 (11) | |
H24 | 0.2763 | 0.5222 | 0.3020 | 0.044 (13)* | |
C25 | 0.2153 (3) | 0.3487 (3) | 0.3139 (2) | 0.0399 (9) | |
C26 | 0.1701 (4) | 0.3145 (4) | 0.2445 (2) | 0.0413 (10) | |
C27 | 0.1880 (3) | 0.2417 (4) | 0.2030 (2) | 0.0403 (10) | |
H27 | 0.2297 | 0.2044 | 0.2139 | 0.056 (15)* | |
C28 | 0.1186 (4) | 0.1747 (4) | 0.0804 (2) | 0.0423 (10) | |
C29 | 0.0565 (4) | 0.2059 (4) | 0.0319 (2) | 0.0423 (10) | |
H29 | 0.0403 | 0.1797 | −0.0130 | 0.054 (14)* | |
C30 | 0.0853 (3) | 0.3017 (4) | 0.1444 (2) | 0.0378 (7) | |
C31 | 0.1685 (4) | 0.0966 (4) | 0.0659 (3) | 0.0487 (11) | |
H31A | 0.2388 | 0.1226 | 0.0920 | 0.073* | |
H31B | 0.1860 | 0.0996 | 0.0181 | 0.073* | |
H31C | 0.1126 | 0.0178 | 0.0785 | 0.073* | |
C32 | 0.0523 (4) | 0.4200 (4) | 0.2318 (3) | 0.0473 (12) | |
H32A | 0.0913 | 0.4940 | 0.2076 | 0.09 (2)* | |
H32B | 0.0730 | 0.4372 | 0.2797 | 0.069 (17)* | |
C33 | −0.0755 (4) | 0.3745 (4) | 0.2263 (3) | 0.0472 (11) | |
C34 | −0.1550 (4) | 0.2597 (4) | 0.2394 (2) | 0.0462 (11) | |
H34 | −0.1282 | 0.2097 | 0.2530 | 0.040 (12)* | |
C35 | −0.2734 (4) | 0.2163 (4) | 0.2330 (3) | 0.0538 (13) | |
H35 | −0.3259 | 0.1375 | 0.2404 | 0.064 (16)* | |
C36 | −0.3133 (4) | 0.2921 (4) | 0.2153 (3) | 0.0510 (12) | |
H36 | −0.3932 | 0.2651 | 0.2137 | 0.056 (15)* | |
C37 | −0.2339 (4) | 0.4087 (4) | 0.1998 (3) | 0.0505 (12) | |
H37 | −0.2602 | 0.4586 | 0.1854 | 0.040 (12)* | |
C38 | −0.1169 (4) | 0.4485 (4) | 0.2061 (3) | 0.0542 (13) | |
H38 | −0.0638 | 0.5265 | 0.1968 | 0.060 (15)* | |
Cl1 | 0.34178 (9) | 0.08248 (9) | 0.23677 (6) | 0.0415 (2) | |
Cl2 | 0.50410 (9) | 0.85717 (10) | 0.41839 (6) | 0.0492 (3) | |
N1 | 0.5403 (3) | 0.4474 (3) | 0.3202 (2) | 0.0499 (9) | |
N2 | 0.5361 (3) | 0.5880 (3) | 0.2585 (2) | 0.0486 (10) | |
N3 | 0.1327 (3) | 0.2340 (3) | 0.14208 (19) | 0.0392 (8) | |
N4 | 0.1037 (3) | 0.3502 (3) | 0.20746 (19) | 0.0383 (6) | |
O1W | 0.4476 (5) | 0.9150 (5) | 0.2668 (3) | 0.0474 (15) | 0.50 |
H1WA | 0.4076 | 0.9367 | 0.2979 | 0.057* | 0.50 |
H1WB | 0.4754 | 0.8780 | 0.2884 | 0.057* | 0.50 |
O2W | 0.7938 (8) | 0.2009 (7) | 0.4080 (5) | 0.072 (2) | 0.50 |
H2WA | 0.8587 | 0.2262 | 0.3857 | 0.087* | 0.50 |
H2WB | 0.7494 | 0.2272 | 0.3924 | 0.087* | 0.50 |
O3W | 0.1192 (8) | 0.8296 (9) | 0.1880 (6) | 0.100 (3) | 0.50 |
H3WA | 0.1196 | 0.7654 | 0.1890 | 0.121* | 0.50 |
H3WB | 0.1634 | 0.8744 | 0.2194 | 0.121* | 0.50 |
S1 | 0.63072 (10) | 0.63434 (11) | 0.39577 (6) | 0.0498 (3) | |
S2 | 0.01587 (10) | 0.30059 (9) | 0.07018 (6) | 0.0448 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.032 (2) | 0.037 (2) | 0.043 (2) | 0.0083 (18) | 0.0137 (18) | 0.0120 (18) |
C2 | 0.038 (2) | 0.044 (2) | 0.049 (3) | 0.016 (2) | 0.0088 (19) | 0.022 (2) |
C3 | 0.048 (3) | 0.040 (2) | 0.049 (3) | 0.008 (2) | 0.026 (2) | 0.015 (2) |
C4 | 0.041 (2) | 0.044 (2) | 0.046 (3) | 0.004 (2) | 0.018 (2) | 0.016 (2) |
C5 | 0.043 (2) | 0.040 (2) | 0.043 (3) | 0.0101 (19) | 0.011 (2) | 0.024 (2) |
C6 | 0.0264 (19) | 0.035 (2) | 0.052 (3) | 0.0021 (17) | 0.0154 (19) | 0.007 (2) |
C7 | 0.031 (2) | 0.037 (2) | 0.047 (3) | 0.0011 (17) | 0.0121 (19) | −0.0010 (19) |
C8 | 0.041 (2) | 0.042 (2) | 0.050 (3) | 0.018 (2) | −0.012 (2) | −0.009 (2) |
C9 | 0.035 (2) | 0.041 (2) | 0.056 (3) | 0.0188 (18) | −0.007 (2) | 0.012 (2) |
C10 | 0.033 (2) | 0.036 (2) | 0.048 (3) | 0.0079 (18) | 0.0031 (19) | 0.0041 (19) |
C11 | 0.039 (2) | 0.047 (3) | 0.069 (3) | 0.019 (2) | −0.014 (2) | −0.010 (2) |
C12 | 0.051 (3) | 0.036 (2) | 0.043 (3) | 0.002 (2) | 0.016 (2) | 0.007 (2) |
C13 | 0.051 (3) | 0.028 (2) | 0.068 (4) | 0.014 (2) | 0.016 (2) | 0.020 (2) |
C14 | 0.041 (2) | 0.035 (2) | 0.051 (3) | 0.0094 (19) | −0.002 (2) | 0.011 (2) |
C15 | 0.042 (2) | 0.051 (3) | 0.047 (3) | 0.015 (2) | 0.006 (2) | 0.020 (2) |
C16 | 0.048 (3) | 0.042 (3) | 0.059 (3) | 0.008 (2) | −0.028 (2) | −0.002 (2) |
C17 | 0.035 (2) | 0.055 (3) | 0.063 (3) | 0.007 (2) | 0.007 (2) | 0.023 (3) |
C18 | 0.053 (3) | 0.067 (3) | 0.051 (3) | 0.032 (3) | 0.000 (2) | 0.002 (2) |
C19 | 0.052 (3) | 0.053 (3) | 0.037 (3) | 0.017 (2) | −0.002 (2) | −0.005 (2) |
C20 | 0.034 (2) | 0.043 (2) | 0.050 (3) | 0.0107 (18) | −0.0118 (19) | −0.0110 (19) |
C21 | 0.054 (3) | 0.040 (2) | 0.042 (3) | 0.015 (2) | −0.001 (2) | 0.005 (2) |
C22 | 0.041 (2) | 0.040 (2) | 0.041 (3) | 0.0166 (18) | −0.0011 (19) | 0.0033 (18) |
C23 | 0.032 (2) | 0.037 (2) | 0.041 (2) | 0.0120 (18) | −0.0115 (18) | −0.0145 (18) |
C24 | 0.040 (2) | 0.033 (2) | 0.046 (3) | 0.0052 (18) | 0.0034 (19) | −0.0038 (19) |
C25 | 0.034 (2) | 0.034 (2) | 0.044 (2) | 0.0115 (17) | 0.0133 (18) | 0.0089 (17) |
C26 | 0.038 (2) | 0.034 (2) | 0.040 (2) | 0.0092 (18) | −0.0019 (18) | 0.0015 (18) |
C27 | 0.0193 (17) | 0.048 (2) | 0.039 (2) | 0.0055 (17) | 0.0006 (16) | −0.0057 (19) |
C28 | 0.049 (2) | 0.042 (2) | 0.033 (2) | 0.0211 (19) | 0.0004 (19) | 0.0074 (18) |
C29 | 0.040 (2) | 0.041 (2) | 0.038 (2) | 0.0144 (18) | −0.0121 (18) | −0.0122 (18) |
C30 | 0.0324 (14) | 0.0343 (14) | 0.0412 (16) | 0.0124 (12) | −0.0032 (13) | 0.0015 (12) |
C31 | 0.053 (3) | 0.051 (3) | 0.044 (3) | 0.028 (2) | −0.012 (2) | −0.013 (2) |
C32 | 0.035 (2) | 0.055 (3) | 0.055 (3) | 0.025 (2) | −0.019 (2) | −0.027 (2) |
C33 | 0.043 (2) | 0.041 (2) | 0.056 (3) | 0.020 (2) | −0.024 (2) | −0.018 (2) |
C34 | 0.047 (3) | 0.031 (2) | 0.056 (3) | 0.0168 (19) | −0.017 (2) | −0.011 (2) |
C35 | 0.048 (3) | 0.047 (3) | 0.048 (3) | 0.010 (2) | −0.008 (2) | −0.016 (2) |
C36 | 0.048 (3) | 0.043 (2) | 0.055 (3) | 0.018 (2) | −0.006 (2) | −0.020 (2) |
C37 | 0.047 (3) | 0.054 (3) | 0.050 (3) | 0.025 (2) | −0.014 (2) | −0.011 (2) |
C38 | 0.051 (3) | 0.045 (3) | 0.058 (3) | 0.018 (2) | −0.016 (2) | −0.018 (2) |
Cl1 | 0.0466 (6) | 0.0407 (5) | 0.0405 (5) | 0.0243 (5) | 0.0168 (4) | 0.0141 (4) |
Cl2 | 0.0390 (5) | 0.0467 (6) | 0.0495 (7) | 0.0121 (5) | −0.0010 (5) | 0.0196 (5) |
N1 | 0.046 (2) | 0.046 (2) | 0.048 (2) | 0.0151 (17) | 0.0070 (17) | 0.0076 (17) |
N2 | 0.0363 (19) | 0.0349 (19) | 0.066 (3) | 0.0113 (16) | −0.0117 (18) | −0.0056 (18) |
N3 | 0.0315 (17) | 0.0290 (16) | 0.048 (2) | 0.0081 (14) | 0.0022 (14) | −0.0012 (15) |
N4 | 0.0330 (13) | 0.0344 (14) | 0.0434 (15) | 0.0137 (11) | −0.0028 (12) | −0.0029 (11) |
O1W | 0.055 (4) | 0.043 (3) | 0.046 (4) | 0.026 (3) | 0.011 (3) | 0.001 (3) |
O2W | 0.092 (6) | 0.058 (4) | 0.078 (6) | 0.045 (4) | −0.012 (5) | −0.007 (4) |
O3W | 0.069 (5) | 0.114 (7) | 0.138 (9) | 0.060 (6) | 0.011 (5) | −0.027 (7) |
S1 | 0.0370 (6) | 0.0464 (6) | 0.0500 (7) | 0.0089 (5) | 0.0067 (5) | 0.0070 (5) |
S2 | 0.0416 (6) | 0.0377 (5) | 0.0446 (6) | 0.0119 (5) | −0.0134 (5) | −0.0021 (5) |
C1—C6 | 1.376 (7) | C21—C22 | 1.406 (6) |
C1—C2 | 1.387 (7) | C21—H21 | 0.9300 |
C1—C7 | 1.493 (6) | C22—C23 | 1.378 (6) |
C2—C3 | 1.417 (7) | C22—H22 | 0.9300 |
C2—H2 | 0.9300 | C23—C24 | 1.389 (6) |
C3—C4 | 1.385 (7) | C23—H23 | 0.9300 |
C3—H3 | 0.9300 | C24—C25 | 1.399 (6) |
C4—C5 | 1.383 (7) | C24—H24 | 0.9300 |
C4—H4 | 0.9300 | C25—C26 | 1.460 (6) |
C5—C6 | 1.411 (7) | C26—C27 | 1.365 (6) |
C5—H5 | 0.9300 | C26—N4 | 1.390 (6) |
C6—H6 | 0.9300 | C27—N3 | 1.374 (6) |
C7—C8 | 1.376 (7) | C27—H27 | 0.9300 |
C7—N2 | 1.382 (6) | C28—N3 | 1.399 (6) |
C8—N1 | 1.413 (6) | C28—C29 | 1.441 (6) |
C8—H8 | 0.9300 | C28—C31 | 1.504 (7) |
C9—N1 | 1.339 (6) | C29—S2 | 1.756 (5) |
C9—C10 | 1.407 (7) | C29—H29 | 0.9300 |
C9—C12 | 1.502 (6) | C30—N3 | 1.324 (5) |
C10—S1 | 1.731 (5) | C30—N4 | 1.354 (6) |
C10—H10 | 0.9300 | C30—S2 | 1.713 (4) |
C11—N2 | 1.363 (7) | C31—H31A | 0.9600 |
C11—N1 | 1.395 (6) | C31—H31B | 0.9600 |
C11—S1 | 1.723 (5) | C31—H31C | 0.9600 |
C12—H12A | 0.9600 | C32—N4 | 1.471 (5) |
C12—H12B | 0.9600 | C32—C33 | 1.486 (6) |
C12—H12C | 0.9600 | C32—H32A | 0.9700 |
C13—N2 | 1.483 (6) | C32—H32B | 0.9700 |
C13—C14 | 1.519 (6) | C33—C34 | 1.370 (6) |
C13—H13A | 0.9700 | C33—C38 | 1.393 (7) |
C13—H13B | 0.9700 | C34—C35 | 1.377 (7) |
C14—C19 | 1.362 (7) | C34—H34 | 0.9300 |
C14—C15 | 1.396 (7) | C35—C36 | 1.388 (8) |
C15—C16 | 1.386 (7) | C35—H35 | 0.9300 |
C15—H15 | 0.9300 | C36—C37 | 1.396 (7) |
C16—C17 | 1.358 (8) | C36—H36 | 0.9300 |
C16—H16 | 0.9300 | C37—C38 | 1.367 (7) |
C17—C18 | 1.399 (8) | C37—H37 | 0.9300 |
C17—H17 | 0.9300 | C38—H38 | 0.9300 |
C18—C19 | 1.355 (7) | O1W—H1WA | 0.9407 |
C18—H18 | 0.9300 | O1W—H1WB | 0.8555 |
C19—H19 | 0.9300 | O2W—H2WA | 0.8657 |
C20—C21 | 1.370 (6) | O2W—H2WB | 0.8731 |
C20—C25 | 1.414 (6) | O3W—H3WA | 0.8501 |
C20—H20 | 0.9300 | O3W—H3WB | 0.8502 |
C6—C1—C2 | 122.9 (4) | C22—C23—C24 | 120.6 (4) |
C6—C1—C7 | 119.1 (4) | C22—C23—H23 | 119.7 |
C2—C1—C7 | 117.7 (4) | C24—C23—H23 | 119.7 |
C1—C2—C3 | 118.2 (4) | C23—C24—C25 | 120.8 (4) |
C1—C2—H2 | 120.9 | C23—C24—H24 | 119.6 |
C3—C2—H2 | 120.9 | C25—C24—H24 | 119.6 |
C4—C3—C2 | 119.9 (5) | C24—C25—C20 | 118.4 (4) |
C4—C3—H3 | 120.1 | C24—C25—C26 | 120.0 (4) |
C2—C3—H3 | 120.1 | C20—C25—C26 | 121.3 (4) |
C5—C4—C3 | 120.3 (5) | C27—C26—N4 | 106.9 (4) |
C5—C4—H4 | 119.9 | C27—C26—C25 | 125.7 (4) |
C3—C4—H4 | 119.9 | N4—C26—C25 | 127.5 (4) |
C4—C5—C6 | 120.9 (5) | C26—C27—N3 | 107.2 (4) |
C4—C5—H5 | 119.5 | C26—C27—H27 | 126.4 |
C6—C5—H5 | 119.5 | N3—C27—H27 | 126.4 |
C1—C6—C5 | 117.8 (5) | N3—C28—C29 | 110.0 (4) |
C1—C6—H6 | 121.1 | N3—C28—C31 | 124.4 (4) |
C5—C6—H6 | 121.1 | C29—C28—C31 | 125.5 (4) |
C8—C7—N2 | 108.4 (4) | C28—C29—S2 | 110.1 (3) |
C8—C7—C1 | 124.2 (4) | C28—C29—H29 | 124.9 |
N2—C7—C1 | 127.3 (4) | S2—C29—H29 | 124.9 |
C7—C8—N1 | 107.5 (4) | N3—C30—N4 | 108.5 (4) |
C7—C8—H8 | 126.2 | N3—C30—S2 | 113.4 (3) |
N1—C8—H8 | 126.2 | N4—C30—S2 | 138.1 (3) |
N1—C9—C10 | 110.0 (4) | C28—C31—H31A | 109.5 |
N1—C9—C12 | 122.6 (4) | C28—C31—H31B | 109.5 |
C10—C9—C12 | 127.4 (4) | H31A—C31—H31B | 109.5 |
C9—C10—S1 | 114.4 (4) | C28—C31—H31C | 109.5 |
C9—C10—H10 | 122.8 | H31A—C31—H31C | 109.5 |
S1—C10—H10 | 122.8 | H31B—C31—H31C | 109.5 |
N2—C11—N1 | 108.4 (4) | N4—C32—C33 | 120.7 (4) |
N2—C11—S1 | 139.0 (4) | N4—C32—H32A | 107.2 |
N1—C11—S1 | 112.5 (4) | C33—C32—H32A | 107.2 |
C9—C12—H12A | 109.5 | N4—C32—H32B | 107.2 |
C9—C12—H12B | 109.5 | C33—C32—H32B | 107.2 |
H12A—C12—H12B | 109.5 | H32A—C32—H32B | 106.8 |
C9—C12—H12C | 109.5 | C34—C33—C38 | 118.5 (4) |
H12A—C12—H12C | 109.5 | C34—C33—C32 | 121.4 (4) |
H12B—C12—H12C | 109.5 | C38—C33—C32 | 120.1 (4) |
N2—C13—C14 | 112.6 (4) | C33—C34—C35 | 121.7 (5) |
N2—C13—H13A | 109.1 | C33—C34—H34 | 119.2 |
C14—C13—H13A | 109.1 | C35—C34—H34 | 119.2 |
N2—C13—H13B | 109.1 | C34—C35—C36 | 119.0 (5) |
C14—C13—H13B | 109.1 | C34—C35—H35 | 120.5 |
H13A—C13—H13B | 107.8 | C36—C35—H35 | 120.5 |
C19—C14—C15 | 120.5 (4) | C35—C36—C37 | 120.2 (5) |
C19—C14—C13 | 120.5 (4) | C35—C36—H36 | 119.9 |
C15—C14—C13 | 118.9 (4) | C37—C36—H36 | 119.9 |
C16—C15—C14 | 118.0 (5) | C38—C37—C36 | 119.1 (5) |
C16—C15—H15 | 121.0 | C38—C37—H37 | 120.5 |
C14—C15—H15 | 121.0 | C36—C37—H37 | 120.5 |
C17—C16—C15 | 121.4 (5) | C37—C38—C33 | 121.4 (5) |
C17—C16—H16 | 119.3 | C37—C38—H38 | 119.3 |
C15—C16—H16 | 119.3 | C33—C38—H38 | 119.3 |
C16—C17—C18 | 119.3 (5) | C9—N1—C11 | 114.8 (4) |
C16—C17—H17 | 120.3 | C9—N1—C8 | 138.3 (4) |
C18—C17—H17 | 120.3 | C11—N1—C8 | 106.9 (4) |
C19—C18—C17 | 119.9 (5) | C11—N2—C7 | 108.8 (4) |
C19—C18—H18 | 120.0 | C11—N2—C13 | 125.2 (4) |
C17—C18—H18 | 120.0 | C7—N2—C13 | 125.8 (4) |
C18—C19—C14 | 120.8 (5) | C30—N3—C27 | 109.5 (4) |
C18—C19—H19 | 119.6 | C30—N3—C28 | 115.6 (4) |
C14—C19—H19 | 119.6 | C27—N3—C28 | 134.9 (4) |
C21—C20—C25 | 120.1 (4) | C30—N4—C26 | 107.9 (3) |
C21—C20—H20 | 120.0 | C30—N4—C32 | 124.2 (4) |
C25—C20—H20 | 120.0 | C26—N4—C32 | 127.7 (4) |
C20—C21—C22 | 121.2 (4) | H1WA—O1W—H1WB | 108.8 |
C20—C21—H21 | 119.4 | H2WA—O2W—H2WB | 113.8 |
C22—C21—H21 | 119.4 | H3WA—O3W—H3WB | 109.5 |
C23—C22—C21 | 118.9 (4) | C11—S1—C10 | 88.3 (2) |
C23—C22—H22 | 120.5 | C30—S2—C29 | 90.8 (2) |
C21—C22—H22 | 120.5 | ||
C6—C1—C2—C3 | 1.9 (6) | C36—C37—C38—C33 | 1.3 (8) |
C7—C1—C2—C3 | 175.1 (3) | C34—C33—C38—C37 | 0.4 (8) |
C1—C2—C3—C4 | −2.1 (6) | C32—C33—C38—C37 | 179.2 (5) |
C2—C3—C4—C5 | 1.6 (6) | C10—C9—N1—C11 | −0.8 (6) |
C3—C4—C5—C6 | −0.8 (6) | C12—C9—N1—C11 | 179.1 (4) |
C2—C1—C6—C5 | −1.1 (6) | C10—C9—N1—C8 | 177.4 (5) |
C7—C1—C6—C5 | −174.2 (3) | C12—C9—N1—C8 | −2.7 (9) |
C4—C5—C6—C1 | 0.5 (6) | N2—C11—N1—C9 | 179.3 (4) |
C6—C1—C7—C8 | 138.1 (5) | S1—C11—N1—C9 | 0.0 (5) |
C2—C1—C7—C8 | −35.4 (6) | N2—C11—N1—C8 | 0.6 (5) |
C6—C1—C7—N2 | −47.5 (6) | S1—C11—N1—C8 | −178.7 (3) |
C2—C1—C7—N2 | 138.9 (5) | C7—C8—N1—C9 | −179.9 (5) |
N2—C7—C8—N1 | 2.0 (5) | C7—C8—N1—C11 | −1.6 (5) |
C1—C7—C8—N1 | 177.3 (4) | N1—C11—N2—C7 | 0.7 (5) |
N1—C9—C10—S1 | 1.3 (5) | S1—C11—N2—C7 | 179.6 (5) |
C12—C9—C10—S1 | −178.6 (4) | N1—C11—N2—C13 | −174.3 (4) |
N2—C13—C14—C19 | 56.6 (6) | S1—C11—N2—C13 | 4.6 (9) |
N2—C13—C14—C15 | −120.9 (5) | C8—C7—N2—C11 | −1.7 (5) |
C19—C14—C15—C16 | 0.0 (7) | C1—C7—N2—C11 | −176.8 (4) |
C13—C14—C15—C16 | 177.5 (4) | C8—C7—N2—C13 | 173.3 (4) |
C14—C15—C16—C17 | 0.6 (7) | C1—C7—N2—C13 | −1.8 (7) |
C15—C16—C17—C18 | −0.9 (8) | C14—C13—N2—C11 | 57.4 (6) |
C16—C17—C18—C19 | 0.6 (8) | C14—C13—N2—C7 | −116.8 (5) |
C17—C18—C19—C14 | 0.0 (8) | N4—C30—N3—C27 | −2.9 (4) |
C15—C14—C19—C18 | −0.3 (8) | S2—C30—N3—C27 | 179.0 (3) |
C13—C14—C19—C18 | −177.7 (5) | N4—C30—N3—C28 | 178.4 (3) |
C25—C20—C21—C22 | −0.3 (7) | S2—C30—N3—C28 | 0.3 (5) |
C20—C21—C22—C23 | 0.7 (7) | C26—C27—N3—C30 | 1.9 (4) |
C21—C22—C23—C24 | −1.6 (7) | C26—C27—N3—C28 | −179.8 (4) |
C22—C23—C24—C25 | 2.1 (7) | C29—C28—N3—C30 | 1.7 (5) |
C23—C24—C25—C20 | −1.7 (6) | C31—C28—N3—C30 | 177.9 (4) |
C23—C24—C25—C26 | −176.0 (4) | C29—C28—N3—C27 | −176.5 (4) |
C21—C20—C25—C24 | 0.8 (7) | C31—C28—N3—C27 | −0.3 (7) |
C21—C20—C25—C26 | 175.0 (4) | N3—C30—N4—C26 | 2.8 (4) |
C24—C25—C26—C27 | 131.4 (4) | S2—C30—N4—C26 | −179.8 (4) |
C20—C25—C26—C27 | −42.8 (6) | N3—C30—N4—C32 | −172.8 (4) |
C24—C25—C26—N4 | −47.3 (6) | S2—C30—N4—C32 | 4.6 (7) |
C20—C25—C26—N4 | 138.6 (4) | C27—C26—N4—C30 | −1.6 (4) |
N4—C26—C27—N3 | −0.1 (4) | C25—C26—N4—C30 | 177.2 (4) |
C25—C26—C27—N3 | −179.0 (4) | C27—C26—N4—C32 | 173.7 (4) |
N3—C28—C29—S2 | −2.9 (4) | C25—C26—N4—C32 | −7.4 (7) |
C31—C28—C29—S2 | −179.1 (4) | C33—C32—N4—C30 | 51.6 (7) |
N4—C32—C33—C34 | 40.2 (7) | C33—C32—N4—C26 | −123.1 (5) |
N4—C32—C33—C38 | −138.5 (5) | N2—C11—S1—C10 | −178.3 (6) |
C38—C33—C34—C35 | 0.2 (7) | N1—C11—S1—C10 | 0.6 (4) |
C32—C33—C34—C35 | −178.6 (5) | C9—C10—S1—C11 | −1.0 (4) |
C33—C34—C35—C36 | −2.5 (7) | N3—C30—S2—C29 | −1.8 (3) |
C34—C35—C36—C37 | 4.2 (7) | N4—C30—S2—C29 | −179.1 (5) |
C35—C36—C37—C38 | −3.7 (7) | C28—C29—S2—C30 | 2.7 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···Cl1i | 0.94 | 2.75 | 3.208 (6) | 111 |
O1W—H1WA···S2ii | 0.94 | 2.88 | 3.819 (6) | 174 |
O1W—H1WB···Cl2 | 0.86 | 2.61 | 3.240 (7) | 132 |
O3W—H3WA···Cl2iii | 0.85 | 2.68 | 3.275 (10) | 129 |
O3W—H3WB···Cl1i | 0.85 | 2.60 | 3.301 (10) | 141 |
C8—H8···Cl1 | 0.93 | 2.78 | 3.664 (5) | 159 |
C10—H10···Cl1iv | 0.93 | 2.72 | 3.390 (5) | 130 |
C18—H18···O3Wv | 0.93 | 2.52 | 3.320 (9) | 144 |
C27—H27···Cl1 | 0.93 | 2.72 | 3.642 (5) | 175 |
Symmetry codes: (i) x, y+1, z; (ii) −x+y, −x+1, z+1/3; (iii) −y+1, x−y+1, z−1/3; (iv) −x+y+1, −x+1, z+1/3; (v) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C19H17N2S+·Cl−·0.75H2O |
Mr | 354.37 |
Crystal system, space group | Trigonal, P32 |
Temperature (K) | 291 |
a, c (Å) | 13.211 (1), 19.555 (3) |
V (Å3) | 2955.7 (6) |
Z | 6 |
Radiation type | Mo Kα |
µ (mm−1) | 0.31 |
Crystal size (mm) | 0.28 × 0.24 × 0.22 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2008) |
Tmin, Tmax | 0.919, 0.936 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16250, 6594, 4827 |
Rint | 0.053 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.060, 0.123, 1.00 |
No. of reflections | 6594 |
No. of parameters | 476 |
No. of restraints | 15 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.30, −0.28 |
Absolute structure | Flack (1983) |
Absolute structure parameter | 0.04 (7) |
Computer programs: SMART (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···Cl1i | 0.94 | 2.75 | 3.208 (6) | 110.8 |
O1W—H1WA···S2ii | 0.94 | 2.88 | 3.819 (6) | 173.7 |
O1W—H1WB···Cl2 | 0.86 | 2.61 | 3.240 (7) | 132.0 |
O3W—H3WA···Cl2iii | 0.85 | 2.68 | 3.275 (10) | 128.7 |
O3W—H3WB···Cl1i | 0.85 | 2.60 | 3.301 (10) | 140.9 |
C8—H8···Cl1 | 0.93 | 2.78 | 3.664 (5) | 158.9 |
C10—H10···Cl1iv | 0.93 | 2.72 | 3.390 (5) | 129.5 |
C18—H18···O3Wv | 0.93 | 2.52 | 3.320 (9) | 144.4 |
C27—H27···Cl1 | 0.93 | 2.72 | 3.642 (5) | 175.1 |
Symmetry codes: (i) x, y+1, z; (ii) −x+y, −x+1, z+1/3; (iii) −y+1, x−y+1, z−1/3; (iv) −x+y+1, −x+1, z+1/3; (v) x+1, y, z. |
Acknowledgements
The authors thank the Scientific Researching Fund Projects of Yunnan Educational Department (grant No. 22012Z017) and the Youth Scientific Fund Projects of Yunnan Normal University for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
N-Heterocyclic carbenes (NHCs) have become ubiquitous ligands in organometallic chemistry and also serve as excellent organocatalysts primarily due to their inherent strong σ-donor ability and nucleophilicity. Recently, Mattson et al. (2006), Liu et al. (2008), Padmanaban et al. (2011) and other researchers have designed new abnormal NHCs compounds and used them as organocatalysts to catalyze umpolung reactions. According to the reports on the synthesis of imidazo[2,1-b]thiazoles (Akkurt et al. (2011, 2007), Huang et al. (2011), Song et al. (2008)), herein we report the synthesis and structure of the title compound. The molecular structure of the title compound is depicted in Fig. 1. The crystallographic asymmetric unit of I, contains two 7-benzyl-3-methyl-6-phenyl-imidazo[2,1-b]thiazol-7-ium cation, two chlorine anion and three water molecule. As shown in Fig.2, the dihedral angle between benzene ring A and B is 60.85, while C and D is 61.66, indicating the two cations in the unit cell are not equivalent. The two symmetrically independent cations are stabilized by π–π stacking interactions, with a separation of 3.718 and 3.663 Å between the centroids of the benzene and thiazole rings. Another interesting part of the structure of title compound is the helical chain (Cl1—O3w—Cl2—O1w) formed entirely by the O—H···Cl hydrogen-bonding interactions (Fig.3 & Fig.4) hydrogen-bonding interactions along c axis in this molecule. O(3w) and O(1w) atoms bridges Cl(1) and Cl(2) atoms with the bond distances of O(3w)···Cl(1) 3.300 (2) Å, O(3w)···Cl(2) 3.275 (1) Å, O(1w)···Cl(1) 3.203 (6) Å, O(1w)···Cl(2) 3.236 (6) Å, while O(2w) doesn't involve in the formation of the helical chain. Probably because O2W water molecules is disordered and isolated, lead to some OH groups without acceptor and can't form hydrogen bonds. The cations connect to the anion-water chain through C—H···Cl hydrogen bonds, and each chloride ion binds to four cations with the average bond distances of 3.389 Å. Thus in the solid-state of title compound, the cation binds to the helical anion-water chain linked by intermolecular hydrogen bonds of O—H···Cl, generating a three-dimensional supramolecular network, and the space between them are occupied by some lattice water molecules.