Experimental
Crystal data
C21H15Cl2NO2 Mr = 384.26 Monoclinic, P 21 /c a = 16.286 (7) Å b = 8.910 (6) Å c = 12.008 (9) Å β = 102.65 (4)° V = 1700.2 (19) Å3 Z = 4 Mo Kα radiation μ = 0.40 mm−1 T = 100 K 0.37 × 0.37 × 0.28 mm
|
Data collection
Rigaku AFC7R diffractometer 4657 measured reflections 3875 independent reflections 3367 reflections with F2 > 2.0σ(F2) Rint = 0.083 3 standard reflections every 150 reflections intensity decay: −0.4%
|
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A | | N1—H6⋯O2 | 0.88 | 2.18 | 2.794 (2) | 126 | | N1—H6⋯O2i | 0.88 | 2.54 | 3.306 (3) | 146 | | C1—H2A⋯O2ii | 0.99 | 2.52 | 3.472 (3) | 160 | | C15—H11⋯Cg2iii | 0.95 | 2.77 | 3.682 (3) | 160 | Symmetry codes: (i) -x+1, -y+1, -z+1; (ii) ; (iii) -x+1, -y+2, -z+1. | |
Data collection: WinAFC (Rigaku, 1999
); cell refinement: WinAFC; data reduction: WinAFC; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008
); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008
); molecular graphics: CrystalStructure (Rigaku, 2010
); software used to prepare material for publication: CrystalStructure.
Supporting information
1-Naphthylmethylamine (5.0 mmol), 6,8-dichloro-3-formylchromone (5.0 mmol) and 2-picoline borane (5.0 mmol) were dissolved in a mixture of MeOH-AcOH (10:1, 60 ml), and stirred overnight at room temperature. Hydrochloric acid (1 M, 20 ml) was added to the reaction mixture, which was then stirred for 30 min. After neutralization with saturated NaHCO3, the mixture was extracted with methylene chloride. The extract was washed with brine, dried over anhydrous Na2SO4 and purified by column chromatography on silica gel (n-hexane: ethyl acetate = 9: 1). The eluted fractions were concentrated and filtered off. Layering n-hexane on the filtrate gave single crystals suitable for X-ray diffraction (yield 19%).
The carbon-bound hydrogen atoms were placed in geometrical positions [C–H 0.95 to 0.99 Å, Uiso(H) = 1.2Ueq(C)], and refined using a riding model. The hydrogen atom of the OH group was located near N1 of the imine in a difference Fourier map, and refined with distance constraint [N–H 0.88 Å, Uiso(H) = 1.2Ueq(N)].
Data collection: WinAFC (Rigaku, 1999); cell refinement: WinAFC (Rigaku, 1999); data reduction: WinAFC (Rigaku, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: CrystalStructure (Rigaku, 2010); software used to prepare material for publication: CrystalStructure (Rigaku, 2010).
(
E)-6,8-Dichloro-3-{[(naphthalen-1-ylmethyl)iminio]methyl}-2
H-chromen-4-olate
top Crystal data top | C21H15Cl2NO2 | F(000) = 792.00 |
| Mr = 384.26 | Dx = 1.501 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71069 Å |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| a = 16.286 (7) Å | θ = 15.7–17.5° |
| b = 8.910 (6) Å | µ = 0.40 mm−1 |
| c = 12.008 (9) Å | T = 100 K |
| β = 102.65 (4)° | Block, yellow |
| V = 1700.2 (19) Å3 | 0.37 × 0.37 × 0.28 mm |
| Z = 4 | |
Data collection top Rigaku AFC7R diffractometer | θmax = 27.6° |
| ω–2θ scans | h = −20→21 |
| 4657 measured reflections | k = 0→11 |
| 3875 independent reflections | l = −15→8 |
| 3367 reflections with F2 > 2.0σ(F2) | 3 standard reflections every 150 reflections |
| Rint = 0.083 | intensity decay: −0.4% |
Refinement top | Refinement on F2 | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.083 | H-atom parameters constrained |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0433P)2 + 0.7479P] where P = (Fo2 + 2Fc2)/3 |
| 3875 reflections | (Δ/σ)max = 0.001 |
| 235 parameters | Δρmax = 0.49 e Å−3 |
| 0 restraints | Δρmin = −0.53 e Å−3 |
| Primary atom site location: structure-invariant direct methods | |
Crystal data top | C21H15Cl2NO2 | V = 1700.2 (19) Å3 |
| Mr = 384.26 | Z = 4 |
| Monoclinic, P21/c | Mo Kα radiation |
| a = 16.286 (7) Å | µ = 0.40 mm−1 |
| b = 8.910 (6) Å | T = 100 K |
| c = 12.008 (9) Å | 0.37 × 0.37 × 0.28 mm |
| β = 102.65 (4)° | |
Data collection top Rigaku AFC7R diffractometer | Rint = 0.083 |
| 4657 measured reflections | 3 standard reflections every 150 reflections |
| 3875 independent reflections | intensity decay: −0.4% |
| 3367 reflections with F2 > 2.0σ(F2) | |
Refinement top | R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
| wR(F2) = 0.083 | H-atom parameters constrained |
| S = 1.04 | Δρmax = 0.49 e Å−3 |
| 3875 reflections | Δρmin = −0.53 e Å−3 |
| 235 parameters | |
Special details top Refinement. Refinement was performed using all reflections. The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt). |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| Cl1 | 0.10099 (2) | 0.41074 (4) | 0.50407 (3) | 0.02134 (10) | |
| Cl2 | 0.17147 (2) | 0.84582 (4) | 0.82092 (3) | 0.01871 (10) | |
| O1 | 0.34501 (6) | 0.79385 (11) | 0.80754 (9) | 0.0176 (2) | |
| O2 | 0.43015 (6) | 0.52671 (12) | 0.57813 (9) | 0.0194 (2) | |
| N1 | 0.58885 (7) | 0.64807 (13) | 0.66903 (11) | 0.0178 (3) | |
| C1 | 0.42933 (8) | 0.73258 (16) | 0.84317 (12) | 0.0173 (3) | |
| C2 | 0.46328 (8) | 0.67928 (15) | 0.74377 (12) | 0.0163 (3) | |
| C3 | 0.40821 (8) | 0.59345 (15) | 0.65803 (12) | 0.0153 (3) | |
| C4 | 0.25901 (8) | 0.50521 (16) | 0.59487 (11) | 0.0149 (3) | |
| C5 | 0.17435 (8) | 0.52122 (16) | 0.59411 (11) | 0.0156 (3) | |
| C6 | 0.14631 (8) | 0.62656 (15) | 0.66285 (11) | 0.0152 (3) | |
| C7 | 0.20515 (8) | 0.71380 (15) | 0.73498 (11) | 0.0141 (3) | |
| C8 | 0.29135 (8) | 0.69931 (15) | 0.73910 (11) | 0.0142 (3) | |
| C9 | 0.31801 (8) | 0.59510 (15) | 0.66686 (11) | 0.0148 (3) | |
| C10 | 0.54680 (8) | 0.70260 (15) | 0.74329 (12) | 0.0166 (3) | |
| C11 | 0.67892 (8) | 0.67249 (16) | 0.68340 (12) | 0.0174 (3) | |
| C12 | 0.70249 (8) | 0.80052 (15) | 0.61334 (11) | 0.0140 (3) | |
| C13 | 0.64295 (9) | 0.87459 (16) | 0.53406 (12) | 0.0176 (3) | |
| C14 | 0.66574 (9) | 0.99175 (17) | 0.46685 (12) | 0.0208 (3) | |
| C15 | 0.74839 (10) | 1.03185 (17) | 0.47995 (12) | 0.0210 (3) | |
| C16 | 0.89800 (9) | 0.99932 (17) | 0.57563 (13) | 0.0212 (3) | |
| C17 | 0.95874 (9) | 0.93028 (17) | 0.65587 (13) | 0.0219 (3) | |
| C18 | 0.93670 (9) | 0.81701 (16) | 0.72581 (12) | 0.0193 (3) | |
| C19 | 0.85400 (8) | 0.77372 (15) | 0.71310 (12) | 0.0157 (3) | |
| C20 | 0.78937 (8) | 0.84224 (14) | 0.63022 (11) | 0.0133 (3) | |
| C21 | 0.81193 (9) | 0.95853 (16) | 0.56097 (12) | 0.0170 (3) | |
| H1B | 0.4283 | 0.6476 | 0.8960 | 0.0207* | |
| H2A | 0.4672 | 0.8106 | 0.8850 | 0.0207* | |
| H3 | 0.2769 | 0.4334 | 0.5466 | 0.0179* | |
| H4 | 0.0879 | 0.6382 | 0.6603 | 0.0182* | |
| H5 | 0.5777 | 0.7643 | 0.8024 | 0.0199* | |
| H6 | 0.5617 | 0.5962 | 0.6100 | 0.0213* | |
| H7A | 0.7048 | 0.5791 | 0.6626 | 0.0209* | |
| H8B | 0.7033 | 0.6925 | 0.7651 | 0.0209* | |
| H9 | 0.5855 | 0.8470 | 0.5240 | 0.0211* | |
| H10 | 0.6236 | 1.0424 | 0.4127 | 0.0249* | |
| H11 | 0.7633 | 1.1098 | 0.4341 | 0.0252* | |
| H12 | 0.9135 | 1.0757 | 0.5290 | 0.0255* | |
| H13 | 1.0160 | 0.9588 | 0.6645 | 0.0263* | |
| H14 | 0.9791 | 0.7702 | 0.7820 | 0.0231* | |
| H15 | 0.8400 | 0.6968 | 0.7605 | 0.0188* | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| Cl1 | 0.01563 (16) | 0.0285 (2) | 0.01929 (17) | −0.00243 (13) | 0.00266 (12) | −0.00941 (13) |
| Cl2 | 0.01504 (16) | 0.01710 (17) | 0.02549 (18) | −0.00033 (12) | 0.00772 (12) | −0.00669 (13) |
| O1 | 0.0124 (5) | 0.0160 (5) | 0.0241 (5) | 0.0000 (4) | 0.0036 (4) | −0.0044 (4) |
| O2 | 0.0161 (5) | 0.0212 (5) | 0.0225 (5) | 0.0025 (4) | 0.0078 (4) | −0.0020 (4) |
| N1 | 0.0120 (6) | 0.0189 (6) | 0.0228 (6) | −0.0021 (5) | 0.0046 (5) | −0.0003 (5) |
| C1 | 0.0116 (6) | 0.0192 (7) | 0.0204 (7) | 0.0005 (5) | 0.0020 (5) | −0.0002 (6) |
| C2 | 0.0139 (6) | 0.0148 (7) | 0.0210 (7) | 0.0018 (5) | 0.0053 (5) | 0.0031 (6) |
| C3 | 0.0138 (6) | 0.0135 (6) | 0.0197 (7) | 0.0027 (5) | 0.0061 (5) | 0.0043 (5) |
| C4 | 0.0160 (6) | 0.0162 (6) | 0.0134 (6) | 0.0024 (5) | 0.0048 (5) | 0.0004 (5) |
| C5 | 0.0155 (7) | 0.0170 (7) | 0.0141 (6) | −0.0015 (5) | 0.0024 (5) | 0.0006 (5) |
| C6 | 0.0125 (6) | 0.0174 (7) | 0.0165 (6) | 0.0008 (5) | 0.0051 (5) | 0.0021 (5) |
| C7 | 0.0155 (6) | 0.0118 (6) | 0.0164 (6) | 0.0024 (5) | 0.0068 (5) | 0.0007 (5) |
| C8 | 0.0137 (6) | 0.0128 (6) | 0.0162 (6) | −0.0001 (5) | 0.0039 (5) | 0.0022 (5) |
| C9 | 0.0138 (6) | 0.0150 (7) | 0.0165 (6) | 0.0018 (5) | 0.0053 (5) | 0.0033 (5) |
| C10 | 0.0146 (6) | 0.0142 (6) | 0.0206 (7) | 0.0000 (5) | 0.0032 (5) | 0.0037 (6) |
| C11 | 0.0110 (6) | 0.0173 (7) | 0.0245 (7) | 0.0012 (5) | 0.0050 (5) | 0.0044 (6) |
| C12 | 0.0140 (6) | 0.0132 (6) | 0.0155 (6) | 0.0001 (5) | 0.0051 (5) | −0.0018 (5) |
| C13 | 0.0162 (7) | 0.0183 (7) | 0.0177 (7) | 0.0011 (5) | 0.0021 (5) | −0.0014 (6) |
| C14 | 0.0244 (7) | 0.0205 (7) | 0.0157 (7) | 0.0033 (6) | 0.0003 (6) | 0.0017 (6) |
| C15 | 0.0282 (8) | 0.0187 (7) | 0.0172 (7) | −0.0015 (6) | 0.0072 (6) | 0.0027 (6) |
| C16 | 0.0231 (8) | 0.0187 (7) | 0.0246 (7) | −0.0042 (6) | 0.0110 (6) | 0.0001 (6) |
| C17 | 0.0153 (7) | 0.0224 (8) | 0.0298 (8) | −0.0038 (6) | 0.0089 (6) | −0.0056 (6) |
| C18 | 0.0150 (7) | 0.0206 (7) | 0.0219 (7) | 0.0030 (6) | 0.0035 (6) | −0.0033 (6) |
| C19 | 0.0161 (6) | 0.0143 (6) | 0.0173 (7) | 0.0004 (5) | 0.0050 (5) | −0.0017 (5) |
| C20 | 0.0144 (6) | 0.0127 (6) | 0.0137 (6) | −0.0000 (5) | 0.0050 (5) | −0.0029 (5) |
| C21 | 0.0199 (7) | 0.0157 (7) | 0.0169 (7) | −0.0008 (6) | 0.0072 (5) | −0.0021 (6) |
Geometric parameters (Å, º) top | Cl1—C5 | 1.7319 (15) | C15—C21 | 1.415 (2) |
| Cl2—C7 | 1.7313 (17) | C16—C17 | 1.367 (2) |
| O1—C1 | 1.4524 (17) | C16—C21 | 1.421 (3) |
| O1—C8 | 1.3543 (17) | C17—C18 | 1.409 (3) |
| O2—C3 | 1.246 (2) | C18—C19 | 1.377 (2) |
| N1—C10 | 1.330 (3) | C19—C20 | 1.4185 (19) |
| N1—C11 | 1.4554 (19) | C20—C21 | 1.426 (3) |
| C1—C2 | 1.498 (3) | N1—H6 | 0.880 |
| C2—C3 | 1.430 (2) | C1—H1B | 0.990 |
| C2—C10 | 1.377 (2) | C1—H2A | 0.990 |
| C3—C9 | 1.496 (2) | C4—H3 | 0.950 |
| C4—C5 | 1.384 (2) | C6—H4 | 0.950 |
| C4—C9 | 1.3958 (19) | C10—H5 | 0.950 |
| C5—C6 | 1.391 (2) | C11—H7A | 0.990 |
| C6—C7 | 1.3817 (19) | C11—H8B | 0.990 |
| C7—C8 | 1.400 (2) | C13—H9 | 0.950 |
| C8—C9 | 1.403 (2) | C14—H10 | 0.950 |
| C11—C12 | 1.516 (3) | C15—H11 | 0.950 |
| C12—C13 | 1.3703 (19) | C16—H12 | 0.950 |
| C12—C20 | 1.434 (2) | C17—H13 | 0.950 |
| C13—C14 | 1.418 (3) | C18—H14 | 0.950 |
| C14—C15 | 1.368 (3) | C19—H15 | 0.950 |
| | | |
| Cl2···O1 | 2.9030 (16) | C2···H9iv | 3.5215 |
| O1···C3 | 2.878 (3) | C2···H10vi | 3.2427 |
| O2···N1 | 2.7938 (19) | C2···H10iv | 3.5375 |
| O2···C4 | 2.844 (2) | C3···H2Aii | 3.3458 |
| O2···C10 | 2.889 (2) | C3···H5ii | 2.9718 |
| N1···C3 | 2.956 (2) | C3···H10vi | 3.3648 |
| N1···C13 | 2.846 (3) | C4···H5ii | 3.4301 |
| C1···C9 | 2.755 (3) | C4···H7Aiii | 3.3561 |
| C2···C8 | 2.794 (3) | C4···H8Bii | 3.2427 |
| C4···C7 | 2.775 (3) | C4···H11vi | 3.4591 |
| C5···C8 | 2.780 (3) | C5···H11vi | 3.4793 |
| C6···C9 | 2.800 (3) | C5···H15ii | 3.4109 |
| C10···C12 | 3.370 (3) | C6···H11vi | 3.1293 |
| C10···C13 | 3.583 (3) | C6···H12vi | 3.5089 |
| C11···C19 | 2.937 (3) | C6···H14viii | 3.5789 |
| C12···C15 | 2.810 (3) | C7···H11vi | 2.7047 |
| C13···C21 | 2.801 (3) | C8···H7Av | 3.5798 |
| C14···C20 | 2.819 (3) | C8···H10vi | 3.4120 |
| C16···C19 | 2.792 (3) | C8···H11vi | 2.6837 |
| C17···C20 | 2.819 (3) | C9···H5ii | 3.3815 |
| C18···C21 | 2.806 (3) | C9···H10vi | 3.5560 |
| Cl1···Cl2i | 3.4590 (17) | C9···H11vi | 3.0717 |
| Cl1···C18ii | 3.531 (3) | C10···H9iv | 3.3197 |
| Cl1···C18iii | 3.372 (3) | C10···H10iv | 3.0585 |
| Cl1···C19ii | 3.531 (3) | C11···H3iii | 3.1482 |
| Cl1···C19iii | 3.298 (3) | C12···H3iii | 2.9038 |
| Cl1···C20iii | 3.483 (2) | C13···H1Bv | 2.8981 |
| Cl2···Cl1iv | 3.4590 (17) | C13···H1Bi | 3.5306 |
| Cl2···C4iv | 3.544 (3) | C13···H2Ai | 3.4463 |
| Cl2···C5iv | 3.478 (3) | C13···H3iii | 3.2759 |
| O1···N1v | 3.327 (3) | C13···H5i | 3.0174 |
| O1···C11v | 3.401 (3) | C14···H1Bv | 2.8448 |
| O2···O2iii | 3.285 (3) | C14···H5i | 3.1497 |
| O2···N1iii | 3.306 (3) | C14···H8Bi | 3.0966 |
| O2···C1ii | 3.472 (3) | C15···H8Bi | 3.2195 |
| O2···C1i | 3.542 (3) | C16···H4v | 3.3653 |
| O2···C10ii | 3.567 (3) | C16···H13ix | 3.4908 |
| N1···O1ii | 3.327 (3) | C16···H14x | 3.3549 |
| N1···O2iii | 3.306 (3) | C17···H4xi | 3.3395 |
| C1···O2v | 3.472 (3) | C17···H4v | 3.1019 |
| C1···O2iv | 3.542 (3) | C17···H12ix | 3.3585 |
| C4···Cl2i | 3.544 (3) | C17···H14x | 3.2288 |
| C5···Cl2i | 3.478 (3) | C18···H4xi | 3.1738 |
| C5···C19ii | 3.302 (3) | C18···H4v | 3.2351 |
| C6···C16ii | 3.558 (3) | C18···H13xii | 3.4745 |
| C6···C17ii | 3.515 (3) | C20···H3iii | 3.2717 |
| C6···C18ii | 3.466 (3) | H1B···C13ii | 2.8981 |
| C6···C19ii | 3.479 (3) | H1B···C13iv | 3.5306 |
| C6···C20ii | 3.542 (3) | H1B···C14ii | 2.8448 |
| C6···C21ii | 3.566 (3) | H1B···H9ii | 2.8715 |
| C7···C21ii | 3.399 (3) | H1B···H9iv | 2.6810 |
| C8···C15vi | 3.511 (3) | H1B···H10ii | 2.7785 |
| C10···O2v | 3.567 (3) | H1B···H10iv | 3.5696 |
| C10···C13iv | 3.567 (3) | H2A···O2v | 2.5248 |
| C10···C14iv | 3.418 (3) | H2A···O2iv | 2.9081 |
| C11···O1ii | 3.401 (3) | H2A···N1v | 3.1678 |
| C13···C10i | 3.567 (3) | H2A···N1iv | 3.5686 |
| C14···C10i | 3.418 (3) | H2A···C3v | 3.3458 |
| C15···C8vi | 3.511 (3) | H2A···C13iv | 3.4463 |
| C16···C6v | 3.558 (3) | H2A···H6v | 2.5906 |
| C17···C6v | 3.515 (3) | H2A···H6iv | 2.9221 |
| C18···Cl1v | 3.531 (3) | H2A···H9iv | 2.6567 |
| C18···Cl1iii | 3.372 (3) | H3···Cl2i | 3.4819 |
| C18···C6v | 3.466 (3) | H3···C11iii | 3.1482 |
| C19···Cl1v | 3.531 (3) | H3···C12iii | 2.9038 |
| C19···Cl1iii | 3.298 (3) | H3···C13iii | 3.2759 |
| C19···C5v | 3.302 (3) | H3···C20iii | 3.2717 |
| C19···C6v | 3.479 (3) | H3···H5ii | 3.0475 |
| C20···Cl1iii | 3.483 (2) | H3···H6iii | 3.5623 |
| C20···C6v | 3.542 (3) | H3···H7Aiii | 2.5963 |
| C21···C6v | 3.566 (3) | H3···H8Bii | 3.0827 |
| C21···C7v | 3.399 (3) | H3···H9iii | 3.5808 |
| Cl1···H3 | 2.8044 | H4···Cl1vii | 3.3003 |
| Cl1···H4 | 2.8011 | H4···C16ii | 3.3653 |
| Cl2···H4 | 2.8007 | H4···C17viii | 3.3395 |
| O2···H3 | 2.5793 | H4···C17ii | 3.1019 |
| O2···H6 | 2.1816 | H4···C18viii | 3.1738 |
| N1···H9 | 2.4771 | H4···C18ii | 3.2351 |
| C1···H5 | 2.5838 | H4···H12vi | 3.4114 |
| C2···H6 | 2.6121 | H4···H13viii | 3.0915 |
| C3···H1B | 2.8456 | H4···H13ii | 3.3779 |
| C3···H2A | 3.3086 | H4···H14viii | 2.7925 |
| C3···H3 | 2.6730 | H4···H14ii | 3.5715 |
| C3···H5 | 3.2932 | H5···O2v | 2.7607 |
| C3···H6 | 2.6854 | H5···C3v | 2.9718 |
| C4···H4 | 3.2775 | H5···C4v | 3.4301 |
| C6···H3 | 3.2754 | H5···C9v | 3.3815 |
| C8···H1B | 2.6266 | H5···C13iv | 3.0174 |
| C8···H2A | 3.1711 | H5···C14iv | 3.1497 |
| C8···H3 | 3.2817 | H5···H3v | 3.0475 |
| C8···H4 | 3.2853 | H5···H9iv | 2.8161 |
| C9···H1B | 2.9757 | H5···H10iv | 3.0576 |
| C10···H1B | 2.9791 | H6···O1ii | 3.1444 |
| C10···H2A | 2.5432 | H6···O2iii | 2.5402 |
| C10···H7A | 3.1414 | H6···C1ii | 3.2859 |
| C10···H8B | 2.5054 | H6···H2Aii | 2.5906 |
| C10···H9 | 3.1166 | H6···H2Ai | 2.9221 |
| C11···H5 | 2.5417 | H6···H3iii | 3.5623 |
| C11···H9 | 2.6689 | H6···H6iii | 3.4103 |
| C11···H15 | 2.5932 | H7A···Cl2ii | 2.8708 |
| C12···H5 | 3.3778 | H7A···O1ii | 2.7154 |
| C12···H6 | 2.9216 | H7A···O2iii | 3.3604 |
| C12···H10 | 3.2782 | H7A···C4iii | 3.3561 |
| C12···H15 | 2.6946 | H7A···C8ii | 3.5798 |
| C13···H6 | 3.0440 | H7A···H3iii | 2.5963 |
| C13···H7A | 3.1064 | H8B···C4v | 3.2427 |
| C13···H8B | 3.1775 | H8B···C14iv | 3.0966 |
| C13···H11 | 3.2717 | H8B···C15iv | 3.2195 |
| C15···H9 | 3.2633 | H8B···H3v | 3.0827 |
| C15···H12 | 2.6531 | H8B···H10iv | 3.1963 |
| C16···H11 | 2.6523 | H8B···H11iv | 3.3862 |
| C16···H14 | 3.2588 | H9···O2iii | 3.5379 |
| C17···H15 | 3.2725 | H9···C1i | 3.0434 |
| C18···H12 | 3.2633 | H9···C2i | 3.5215 |
| C19···H7A | 2.9380 | H9···C10i | 3.3197 |
| C19···H8B | 2.7588 | H9···H1Bv | 2.8715 |
| C19···H13 | 3.2701 | H9···H1Bi | 2.6810 |
| C20···H7A | 2.7891 | H9···H2Ai | 2.6567 |
| C20···H8B | 2.7134 | H9···H3iii | 3.5808 |
| C20···H9 | 3.2869 | H9···H5i | 2.8161 |
| C20···H11 | 3.3119 | H10···O1vi | 3.1583 |
| C20···H12 | 3.3119 | H10···N1i | 3.3222 |
| C20···H14 | 3.2890 | H10···C2vi | 3.2427 |
| C21···H10 | 3.2781 | H10···C2i | 3.5375 |
| C21···H13 | 3.2836 | H10···C3vi | 3.3648 |
| C21···H15 | 3.3029 | H10···C8vi | 3.4120 |
| H1B···H5 | 3.0755 | H10···C9vi | 3.5560 |
| H2A···H5 | 2.2747 | H10···C10i | 3.0585 |
| H5···H6 | 2.7173 | H10···H1Bv | 2.7785 |
| H5···H7A | 3.3695 | H10···H1Bi | 3.5696 |
| H5···H8B | 2.2788 | H10···H5i | 3.0576 |
| H5···H9 | 3.4527 | H10···H8Bi | 3.1963 |
| H6···H7A | 2.2832 | H11···Cl2v | 3.5822 |
| H6···H8B | 2.7639 | H11···Cl2vi | 3.4771 |
| H6···H9 | 2.5271 | H11···O1vi | 3.1669 |
| H7A···H9 | 3.2912 | H11···C4vi | 3.4591 |
| H7A···H15 | 2.4895 | H11···C5vi | 3.4793 |
| H8B···H9 | 3.3945 | H11···C6vi | 3.1293 |
| H8B···H15 | 2.2403 | H11···C7vi | 2.7047 |
| H9···H10 | 2.3596 | H11···C8vi | 2.6837 |
| H10···H11 | 2.3125 | H11···C9vi | 3.0717 |
| H11···H12 | 2.4808 | H11···H8Bi | 3.3862 |
| H12···H13 | 2.3085 | H12···Cl2v | 3.4716 |
| H13···H14 | 2.3547 | H12···C6vi | 3.5089 |
| H14···H15 | 2.3174 | H12···C17ix | 3.3585 |
| Cl1···H4vii | 3.3003 | H12···H4vi | 3.4114 |
| Cl1···H14ii | 3.3665 | H12···H12ix | 3.3307 |
| Cl1···H15ii | 3.3698 | H12···H13ix | 2.8245 |
| Cl2···H3iv | 3.4819 | H12···H14x | 3.0781 |
| Cl2···H7Av | 2.8708 | H13···Cl2xi | 2.9779 |
| Cl2···H11ii | 3.5822 | H13···C16ix | 3.4908 |
| Cl2···H11vi | 3.4771 | H13···C18x | 3.4745 |
| Cl2···H12ii | 3.4716 | H13···H4xi | 3.0915 |
| Cl2···H13viii | 2.9779 | H13···H4v | 3.3779 |
| Cl2···H14viii | 3.1376 | H13···H12ix | 2.8245 |
| Cl2···H15v | 3.2700 | H13···H14x | 2.8458 |
| O1···H6v | 3.1444 | H13···H15x | 3.1438 |
| O1···H7Av | 2.7154 | H14···Cl1v | 3.3665 |
| O1···H10vi | 3.1583 | H14···Cl2xi | 3.1376 |
| O1···H11vi | 3.1669 | H14···C6xi | 3.5789 |
| O2···H2Aii | 2.5248 | H14···C16xii | 3.3549 |
| O2···H2Ai | 2.9081 | H14···C17xii | 3.2288 |
| O2···H5ii | 2.7607 | H14···H4xi | 2.7925 |
| O2···H6iii | 2.5402 | H14···H4v | 3.5715 |
| O2···H7Aiii | 3.3604 | H14···H12xii | 3.0781 |
| O2···H9iii | 3.5379 | H14···H13xii | 2.8458 |
| N1···H2Aii | 3.1678 | H15···Cl1v | 3.3698 |
| N1···H2Ai | 3.5686 | H15···Cl2ii | 3.2700 |
| N1···H10iv | 3.3222 | H15···C5v | 3.4109 |
| C1···H6v | 3.2859 | H15···H13xii | 3.1438 |
| C1···H9iv | 3.0434 | | |
| | | |
| C1—O1—C8 | 112.82 (12) | C19—C20—C21 | 118.39 (13) |
| C10—N1—C11 | 121.31 (12) | C15—C21—C16 | 121.33 (15) |
| O1—C1—C2 | 112.00 (12) | C15—C21—C20 | 119.55 (14) |
| C1—C2—C3 | 117.41 (13) | C16—C21—C20 | 119.12 (13) |
| C1—C2—C10 | 119.51 (12) | C10—N1—H6 | 119.342 |
| C3—C2—C10 | 122.82 (14) | C11—N1—H6 | 119.346 |
| O2—C3—C2 | 124.70 (13) | O1—C1—H1B | 109.210 |
| O2—C3—C9 | 120.73 (12) | O1—C1—H2A | 109.215 |
| C2—C3—C9 | 114.49 (13) | C2—C1—H1B | 109.214 |
| C5—C4—C9 | 119.64 (14) | C2—C1—H2A | 109.212 |
| Cl1—C5—C4 | 119.70 (12) | H1B—C1—H2A | 107.905 |
| Cl1—C5—C6 | 118.85 (11) | C5—C4—H3 | 120.177 |
| C4—C5—C6 | 121.43 (12) | C9—C4—H3 | 120.180 |
| C5—C6—C7 | 118.60 (13) | C5—C6—H4 | 120.699 |
| Cl2—C7—C6 | 119.28 (11) | C7—C6—H4 | 120.701 |
| Cl2—C7—C8 | 119.20 (10) | N1—C10—H5 | 116.499 |
| C6—C7—C8 | 121.52 (13) | C2—C10—H5 | 116.493 |
| O1—C8—C7 | 118.23 (13) | N1—C11—H7A | 108.592 |
| O1—C8—C9 | 122.75 (13) | N1—C11—H8B | 108.590 |
| C7—C8—C9 | 118.88 (12) | C12—C11—H7A | 108.590 |
| C3—C9—C4 | 120.27 (13) | C12—C11—H8B | 108.589 |
| C3—C9—C8 | 119.48 (12) | H7A—C11—H8B | 107.556 |
| C4—C9—C8 | 119.90 (13) | C12—C13—H9 | 119.454 |
| N1—C10—C2 | 127.01 (13) | C14—C13—H9 | 119.453 |
| N1—C11—C12 | 114.70 (11) | C13—C14—H10 | 119.980 |
| C11—C12—C13 | 121.42 (13) | C15—C14—H10 | 119.986 |
| C11—C12—C20 | 118.60 (11) | C14—C15—H11 | 119.628 |
| C13—C12—C20 | 119.98 (14) | C21—C15—H11 | 119.617 |
| C12—C13—C14 | 121.09 (14) | C17—C16—H12 | 119.532 |
| C13—C14—C15 | 120.03 (13) | C21—C16—H12 | 119.524 |
| C14—C15—C21 | 120.75 (15) | C16—C17—H13 | 119.901 |
| C17—C16—C21 | 120.94 (15) | C18—C17—H13 | 119.892 |
| C16—C17—C18 | 120.21 (14) | C17—C18—H14 | 119.822 |
| C17—C18—C19 | 120.35 (13) | C19—C18—H14 | 119.826 |
| C18—C19—C20 | 120.98 (14) | C18—C19—H15 | 119.511 |
| C12—C20—C19 | 123.04 (13) | C20—C19—H15 | 119.512 |
| C12—C20—C21 | 118.57 (12) | | |
| | | |
| C1—O1—C8—C7 | 155.30 (11) | O1—C8—C9—C4 | −177.29 (11) |
| C1—O1—C8—C9 | −29.15 (17) | C7—C8—C9—C3 | 171.33 (11) |
| C8—O1—C1—C2 | 52.17 (15) | C7—C8—C9—C4 | −1.77 (19) |
| C8—O1—C1—H1B | −68.9 | N1—C11—C12—C13 | −6.86 (19) |
| C8—O1—C1—H2A | 173.3 | N1—C11—C12—C20 | 174.05 (11) |
| C10—N1—C11—C12 | −98.17 (16) | H7A—C11—C12—C13 | 114.8 |
| C10—N1—C11—H7A | 140.2 | H7A—C11—C12—C20 | −64.3 |
| C10—N1—C11—H8B | 23.5 | H8B—C11—C12—C13 | −128.5 |
| C11—N1—C10—C2 | −175.34 (12) | H8B—C11—C12—C20 | 52.4 |
| C11—N1—C10—H5 | 4.7 | C11—C12—C13—C14 | −178.41 (12) |
| H6—N1—C10—C2 | 4.7 | C11—C12—C13—H9 | 1.6 |
| H6—N1—C10—H5 | −175.3 | C11—C12—C20—C19 | −2.90 (19) |
| H6—N1—C11—C12 | 81.8 | C11—C12—C20—C21 | 177.44 (11) |
| H6—N1—C11—H7A | −39.8 | C13—C12—C20—C19 | 178.00 (12) |
| H6—N1—C11—H8B | −156.5 | C13—C12—C20—C21 | −1.66 (19) |
| O1—C1—C2—C3 | −44.51 (16) | C20—C12—C13—C14 | 0.7 (2) |
| O1—C1—C2—C10 | 141.16 (11) | C20—C12—C13—H9 | −179.3 |
| H1B—C1—C2—C3 | 76.6 | C12—C13—C14—C15 | 0.5 (3) |
| H1B—C1—C2—C10 | −97.7 | C12—C13—C14—H10 | −179.5 |
| H2A—C1—C2—C3 | −165.6 | H9—C13—C14—C15 | −179.5 |
| H2A—C1—C2—C10 | 20.1 | H9—C13—C14—H10 | 0.5 |
| C1—C2—C3—O2 | −171.00 (12) | C13—C14—C15—C21 | −0.6 (3) |
| C1—C2—C3—C9 | 12.11 (17) | C13—C14—C15—H11 | 179.4 |
| C1—C2—C10—N1 | 171.75 (12) | H10—C14—C15—C21 | 179.4 |
| C1—C2—C10—H5 | −8.3 | H10—C14—C15—H11 | −0.6 |
| C3—C2—C10—N1 | −2.3 (3) | C14—C15—C21—C16 | −179.85 (13) |
| C3—C2—C10—H5 | 177.7 | C14—C15—C21—C20 | −0.4 (3) |
| C10—C2—C3—O2 | 3.1 (3) | H11—C15—C21—C16 | 0.1 |
| C10—C2—C3—C9 | −173.76 (12) | H11—C15—C21—C20 | 179.6 |
| O2—C3—C9—C4 | 8.74 (19) | C17—C16—C21—C15 | 178.49 (13) |
| O2—C3—C9—C8 | −164.33 (12) | C17—C16—C21—C20 | −0.9 (3) |
| C2—C3—C9—C4 | −174.23 (11) | C21—C16—C17—C18 | −0.1 (3) |
| C2—C3—C9—C8 | 12.69 (17) | C21—C16—C17—H13 | 179.9 |
| C5—C4—C9—C3 | −172.09 (11) | H12—C16—C17—C18 | 179.9 |
| C5—C4—C9—C8 | 1.0 (2) | H12—C16—C17—H13 | −0.1 |
| C9—C4—C5—Cl1 | 179.53 (11) | H12—C16—C21—C15 | −1.5 |
| C9—C4—C5—C6 | 0.7 (2) | H12—C16—C21—C20 | 179.1 |
| H3—C4—C5—Cl1 | −0.5 | C16—C17—C18—C19 | 0.7 (3) |
| H3—C4—C5—C6 | −179.3 | C16—C17—C18—H14 | −179.3 |
| H3—C4—C9—C3 | 7.9 | H13—C17—C18—C19 | −179.3 |
| H3—C4—C9—C8 | −179.0 | H13—C17—C18—H14 | 0.7 |
| Cl1—C5—C6—C7 | 179.64 (9) | C17—C18—C19—C20 | −0.3 (3) |
| Cl1—C5—C6—H4 | −0.4 | C17—C18—C19—H15 | 179.7 |
| C4—C5—C6—C7 | −1.6 (2) | H14—C18—C19—C20 | 179.7 |
| C4—C5—C6—H4 | 178.4 | H14—C18—C19—H15 | −0.3 |
| C5—C6—C7—Cl2 | 179.84 (11) | C18—C19—C20—C12 | 179.65 (12) |
| C5—C6—C7—C8 | 0.70 (19) | C18—C19—C20—C21 | −0.7 (2) |
| H4—C6—C7—Cl2 | −0.2 | H15—C19—C20—C12 | −0.3 |
| H4—C6—C7—C8 | −179.3 | H15—C19—C20—C21 | 179.3 |
| Cl2—C7—C8—O1 | −2.47 (17) | C12—C20—C21—C15 | 1.54 (19) |
| Cl2—C7—C8—C9 | −178.20 (8) | C12—C20—C21—C16 | −179.02 (11) |
| C6—C7—C8—O1 | 176.67 (12) | C19—C20—C21—C15 | −178.13 (12) |
| C6—C7—C8—C9 | 0.94 (19) | C19—C20—C21—C16 | 1.30 (19) |
| O1—C8—C9—C3 | −4.19 (19) | | |
| Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x+1, y−1/2, −z+3/2; (iii) −x+1, −y+1, −z+1; (iv) x, −y+3/2, z+1/2; (v) −x+1, y+1/2, −z+3/2; (vi) −x+1, −y+2, −z+1; (vii) −x, −y+1, −z+1; (viii) x−1, y, z; (ix) −x+2, −y+2, −z+1; (x) −x+2, y+1/2, −z+3/2; (xi) x+1, y, z; (xii) −x+2, y−1/2, −z+3/2. |
Hydrogen-bond geometry (Å, º) top| Cg2 is the centroid of the C4–C9 ring. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H6···O2 | 0.88 | 2.18 | 2.794 (2) | 126 |
| N1—H6···O2iii | 0.88 | 2.54 | 3.306 (3) | 146 |
| C1—H2A···O2v | 0.99 | 2.52 | 3.472 (3) | 160 |
| C15—H11···Cg2vi | 0.95 | 2.77 | 3.682 (3) | 160 |
| Symmetry codes: (iii) −x+1, −y+1, −z+1; (v) −x+1, y+1/2, −z+3/2; (vi) −x+1, −y+2, −z+1. |
Experimental details
| Crystal data |
| Chemical formula | C21H15Cl2NO2 |
| Mr | 384.26 |
| Crystal system, space group | Monoclinic, P21/c |
| Temperature (K) | 100 |
| a, b, c (Å) | 16.286 (7), 8.910 (6), 12.008 (9) |
| β (°) | 102.65 (4) |
| V (Å3) | 1700.2 (19) |
| Z | 4 |
| Radiation type | Mo Kα |
| µ (mm−1) | 0.40 |
| Crystal size (mm) | 0.37 × 0.37 × 0.28 |
| |
| Data collection |
| Diffractometer | Rigaku AFC7R diffractometer |
| Absorption correction | – |
No. of measured, independent and observed [F2 > 2.0σ(F2)] reflections | 4657, 3875, 3367 |
| Rint | 0.083 |
| (sin θ/λ)max (Å−1) | 0.651 |
| |
| Refinement |
| R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.083, 1.04 |
| No. of reflections | 3875 |
| No. of parameters | 235 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.49, −0.53 |
Hydrogen-bond geometry (Å, º) top| Cg2 is the centroid of the C4–C9 ring. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H6···O2 | 0.88 | 2.18 | 2.794 (2) | 126 |
| N1—H6···O2i | 0.88 | 2.54 | 3.306 (3) | 146 |
| C1—H2A···O2ii | 0.99 | 2.52 | 3.472 (3) | 160 |
| C15—H11···Cg2iii | 0.95 | 2.77 | 3.682 (3) | 160 |
| Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, y+1/2, −z+3/2; (iii) −x+1, −y+2, −z+1. |
Acknowledgements
We acknowledge the University of Shizuoka for supporting this study.
References
Benaouida, M. A., Chetioui, S. & Bouaoud, S. E. (2013). Acta Cryst. E69, o867–o868. CSD CrossRef CAS IUCr Journals Google Scholar
Khan, K. M., Ambreen, N., Hussain, S., Perveen, S. & Choudhary, M. I. (2009). Bioorg. Med. Chem. 17, 2983–2988. Web of Science CrossRef PubMed CAS Google Scholar
Małecka, M. & Budzisz, E. (2006). Acta Cryst. E62, o5058–o5060. Web of Science CSD CrossRef IUCr Journals Google Scholar
Rigaku (1999). WinAFC Diffractometer Control Software. Rigaku Corporation, Tokyo, Japan. Google Scholar
Rigaku (2010). CrystalStructure. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Tu, Q. D., Li, D., Sun, Y., Han, X. Y., Yi, F., Sha, Y., Ren, Y. L., Ding, M. W., Feng, L. L. & Wan, J. (2013). Bioorg. Med. Chem. 21, 2826–2831. Web of Science CrossRef CAS PubMed Google Scholar
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Schiff bases of 3-formyl chromones have attracted much attention due to their biological functions such as enzyme inhibition (Khan et al. 2009; Tu et al. 2013). Here we report the crystal structure of the title compound, which was obtained from the condensation reaction of 6,8-dichloro-3-formylchromone with 1-naphthylmethylamine and successive reduction with 2-picoline borane. The structure shows that the H atom of the –OH group is transferred to the N1 atom of the imine, thus forming a zwitterion. As a result, an intramolecular O···H–N [O2···N1 = 2.795 (2) Å], rather than O–H···N, hydrogen bond is formed. The bond distances O2–C3 [1.245 (3) Å], C3–C2 [1.431 (3) Å], C2–C10 [1.377 (3) Å] and C10–N1 [1.329 (3) Å] and torsion angles O2–C3–C2–C10 [3.2 (3)°] and C3–C2–C10–N1 [–2.4 (3)°] in the six-membered ring indicate charge delocalization among the atoms. This effect might be responsible for the preferential reduction of the α,β-unsaturated carbonyl of the synthetic intermediate, rather than reduction of the imine. The dihedral angle between the naphthalene ring and the benzene part of the 2H-chromen ring is 87.41 (4)°. In the crystal, the molecules are packed through intermolecular N–H···O, as shown in Figure 2, π···π, C-Cl···π, C-H···π and C-H···O interactions.