organic compounds
6,8-Dichloro-4-oxochromene-3-carbaldehyde
aSchool of Pharmaceutical Sciences, University of Shizuoka, 52-1 Yada, Suruga-ku, Shizuoka 422-8526, Japan
*Correspondence e-mail: ishi206@u-shizuoka-ken.ac.jp
The 10H4Cl2O3, contain two essentially planar independent molecules (mean atomic deviations from the corresponding least-square planes are 0.041 and 0.045 Å for molecules 1 and 2, respectively). In the crystal, molecules are linked through a pair of halogen bonds [Cl⋯O separations are 3.044 (5) and 3.033 (6) Å, C—Cl⋯O angles are 160.4 (3) and 162.8 (3)°, and C=O⋯Cl angles are 138.7 (4) and 139.6 (4)°, respectively, in molecules 1 and 2] and C—H⋯O hydrogen bonds into slightly folded bands [the dihedral angle between the planes of neighboring molecules is 8.6 (2)°] along the c-axis direction.
of the title compound, CRelated literature
For the biological activity of the title and related compounds, see: Shim et al. (2003); Kawase et al. (2007); Dückert et al. (2012). For related structures, see: Ishikawa et al. (2013a,b). For halogen bonding, see: Auffinger et al. (2004); Metrangolo et al. (2005); Wilcken et al. (2013).
Experimental
Crystal data
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Data collection: WinAFC (Rigaku, 1999); cell WinAFC; data reduction: WinAFC; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: CrystalStructure (Rigaku, 2010); software used to prepare material for publication: CrystalStructure.
Supporting information
10.1107/S1600536813022228/ld2111sup1.cif
contains datablocks General, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813022228/ld2111Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813022228/ld2111Isup3.cml
Single crystals suitable for X-ray diffraction were obtained by slow evaporation of a 2-butanone solution of commercially available 6,8-dichloro-3-formylchromone at room temperature.
The C(sp2)-bound hydrogen atoms were placed in geometrical positions [C–H 0.95 Å, Uiso(H) = 1.2Ueq(C)], and refined using a riding model.
Data collection: WinAFC (Rigaku, 1999); cell
WinAFC (Rigaku, 1999); data reduction: WinAFC (Rigaku, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: CrystalStructure (Rigaku, 2010); software used to prepare material for publication: CrystalStructure (Rigaku, 2010).C10H4Cl2O3 | Z = 4 |
Mr = 243.05 | F(000) = 488.00 |
Triclinic, P1 | Dx = 1.760 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71069 Å |
a = 8.288 (8) Å | Cell parameters from 23 reflections |
b = 8.325 (7) Å | θ = 15.2–17.4° |
c = 13.706 (7) Å | µ = 0.68 mm−1 |
α = 96.55 (6)° | T = 100 K |
β = 92.23 (7)° | Prismatic, colourless |
γ = 101.98 (7)° | 0.42 × 0.22 × 0.08 mm |
V = 917.2 (13) Å3 |
Rigaku AFC-7R diffractometer | Rint = 0.057 |
ω–2θ scans | θmax = 27.5° |
Absorption correction: ψ scan (North et al., 1968) | h = −10→6 |
Tmin = 0.841, Tmax = 0.947 | k = −10→10 |
5130 measured reflections | l = −17→17 |
4203 independent reflections | 3 standard reflections every 150 reflections |
2596 reflections with F2 > 2σ(F2) | intensity decay: 4.9% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.076 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.212 | H-atom parameters constrained |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0531P)2 + 6.620P] where P = (Fo2 + 2Fc2)/3 |
4203 reflections | (Δ/σ)max < 0.001 |
271 parameters | Δρmax = 0.70 e Å−3 |
0 restraints | Δρmin = −0.79 e Å−3 |
Primary atom site location: structure-invariant direct methods |
C10H4Cl2O3 | γ = 101.98 (7)° |
Mr = 243.05 | V = 917.2 (13) Å3 |
Triclinic, P1 | Z = 4 |
a = 8.288 (8) Å | Mo Kα radiation |
b = 8.325 (7) Å | µ = 0.68 mm−1 |
c = 13.706 (7) Å | T = 100 K |
α = 96.55 (6)° | 0.42 × 0.22 × 0.08 mm |
β = 92.23 (7)° |
Rigaku AFC-7R diffractometer | 2596 reflections with F2 > 2σ(F2) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.057 |
Tmin = 0.841, Tmax = 0.947 | 3 standard reflections every 150 reflections |
5130 measured reflections | intensity decay: 4.9% |
4203 independent reflections |
R[F2 > 2σ(F2)] = 0.076 | 0 restraints |
wR(F2) = 0.212 | H-atom parameters constrained |
S = 1.10 | Δρmax = 0.70 e Å−3 |
4203 reflections | Δρmin = −0.79 e Å−3 |
271 parameters |
Refinement. Refinement was performed using all reflections. The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt). |
x | y | z | Uiso*/Ueq | ||
Cl1a | 0.9284 (2) | 0.7180 (2) | −0.05206 (12) | 0.0275 (4) | |
Cl2a | 0.8997 (2) | 0.60177 (19) | 0.32529 (11) | 0.0243 (4) | |
Cl1b | 0.8654 (3) | 1.0637 (2) | 0.20783 (12) | 0.0293 (4) | |
Cl2b | 0.7665 (2) | 1.01839 (19) | 0.59010 (11) | 0.0246 (4) | |
O1a | 0.6255 (6) | 0.3339 (5) | 0.2521 (3) | 0.0218 (10) | |
O2a | 0.4506 (6) | 0.1743 (6) | −0.0336 (4) | 0.0277 (11) | |
O3a | 0.2398 (7) | −0.0767 (6) | 0.1869 (4) | 0.0319 (12) | |
O1b | 0.4940 (6) | 0.7493 (6) | 0.5162 (3) | 0.0219 (10) | |
O2b | 0.3559 (6) | 0.5491 (6) | 0.2305 (3) | 0.0291 (11) | |
O3b | 0.1021 (7) | 0.3424 (6) | 0.4522 (4) | 0.0326 (12) | |
C1a | 0.4980 (8) | 0.2042 (8) | 0.2288 (5) | 0.0221 (13) | |
C2a | 0.4342 (8) | 0.1454 (8) | 0.1358 (5) | 0.0197 (13) | |
C3a | 0.5023 (8) | 0.2255 (8) | 0.0520 (5) | 0.0217 (13) | |
C4a | 0.7126 (9) | 0.4638 (8) | 0.0063 (5) | 0.0242 (14) | |
C5a | 0.8382 (8) | 0.5956 (8) | 0.0344 (5) | 0.0201 (13) | |
C6a | 0.9020 (8) | 0.6399 (8) | 0.1321 (5) | 0.0202 (13) | |
C7a | 0.8290 (8) | 0.5497 (8) | 0.2026 (5) | 0.0197 (13) | |
C8a | 0.6945 (8) | 0.4171 (8) | 0.1770 (5) | 0.0202 (13) | |
C9a | 0.6370 (9) | 0.3695 (8) | 0.0784 (5) | 0.0207 (13) | |
C10a | 0.2954 (9) | −0.0026 (8) | 0.1204 (5) | 0.0250 (14) | |
C1b | 0.3630 (8) | 0.6197 (8) | 0.4918 (5) | 0.0220 (13) | |
C2b | 0.3130 (8) | 0.5479 (8) | 0.4003 (5) | 0.0217 (13) | |
C3b | 0.3958 (8) | 0.6127 (8) | 0.3161 (5) | 0.0214 (13) | |
C4b | 0.6216 (8) | 0.8361 (8) | 0.2689 (5) | 0.0220 (13) | |
C5b | 0.7526 (8) | 0.9654 (8) | 0.2961 (5) | 0.0227 (14) | |
C6b | 0.8016 (9) | 1.0234 (8) | 0.3958 (5) | 0.0234 (14) | |
C7b | 0.7127 (8) | 0.9495 (8) | 0.4674 (5) | 0.0217 (13) | |
C8b | 0.5792 (8) | 0.8170 (8) | 0.4411 (5) | 0.0188 (13) | |
C9b | 0.5333 (8) | 0.7557 (8) | 0.3414 (5) | 0.0190 (13) | |
C10b | 0.1768 (9) | 0.4034 (8) | 0.3852 (5) | 0.0238 (14) | |
H1a | 0.4491 | 0.1499 | 0.2811 | 0.0265* | |
H2a | 0.6755 | 0.4349 | −0.0611 | 0.0290* | |
H3a | 0.9933 | 0.7302 | 0.1493 | 0.0243* | |
H4a | 0.2484 | −0.0406 | 0.0555 | 0.0300* | |
H1b | 0.3024 | 0.5769 | 0.5440 | 0.0264* | |
H2b | 0.5904 | 0.8006 | 0.2012 | 0.0264* | |
H3b | 0.8945 | 1.1120 | 0.4131 | 0.0281* | |
H4b | 0.1440 | 0.3536 | 0.3196 | 0.0286* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1a | 0.0338 (9) | 0.0277 (9) | 0.0216 (8) | 0.0044 (7) | 0.0053 (7) | 0.0088 (6) |
Cl2a | 0.0312 (9) | 0.0231 (8) | 0.0166 (7) | 0.0037 (7) | −0.0028 (6) | −0.0007 (6) |
Cl1b | 0.0345 (10) | 0.0287 (9) | 0.0246 (8) | 0.0034 (8) | 0.0082 (7) | 0.0071 (7) |
Cl2b | 0.0311 (9) | 0.0232 (8) | 0.0171 (7) | 0.0031 (7) | −0.0008 (6) | −0.0016 (6) |
O1a | 0.034 (3) | 0.019 (3) | 0.012 (2) | 0.0034 (19) | 0.0043 (18) | 0.0014 (16) |
O2a | 0.035 (3) | 0.032 (3) | 0.014 (3) | 0.005 (3) | −0.0023 (19) | −0.0005 (18) |
O3a | 0.037 (3) | 0.030 (3) | 0.023 (3) | −0.005 (3) | 0.006 (2) | 0.002 (2) |
O1b | 0.029 (3) | 0.021 (3) | 0.014 (2) | 0.0013 (19) | 0.0014 (18) | 0.0028 (17) |
O2b | 0.035 (3) | 0.035 (3) | 0.014 (3) | 0.003 (3) | −0.0017 (19) | −0.0023 (19) |
O3b | 0.036 (3) | 0.032 (3) | 0.025 (3) | −0.007 (3) | −0.002 (3) | 0.005 (2) |
C1a | 0.025 (4) | 0.022 (4) | 0.020 (3) | 0.006 (3) | 0.001 (3) | 0.004 (3) |
C2a | 0.020 (4) | 0.021 (3) | 0.018 (3) | 0.005 (3) | 0.003 (3) | 0.001 (3) |
C3a | 0.026 (4) | 0.020 (3) | 0.019 (3) | 0.007 (3) | −0.001 (3) | −0.001 (3) |
C4a | 0.033 (4) | 0.025 (4) | 0.013 (3) | 0.003 (3) | 0.003 (3) | 0.004 (3) |
C5a | 0.028 (4) | 0.019 (3) | 0.017 (3) | 0.010 (3) | 0.007 (3) | 0.006 (3) |
C6a | 0.025 (4) | 0.017 (3) | 0.019 (3) | 0.004 (3) | 0.003 (3) | 0.002 (3) |
C7a | 0.025 (4) | 0.020 (3) | 0.014 (3) | 0.006 (3) | −0.001 (3) | −0.001 (3) |
C8a | 0.024 (4) | 0.019 (3) | 0.017 (3) | 0.004 (3) | 0.002 (3) | 0.004 (3) |
C9a | 0.030 (4) | 0.018 (3) | 0.015 (3) | 0.009 (3) | 0.002 (3) | 0.001 (3) |
C10a | 0.030 (4) | 0.019 (3) | 0.024 (4) | 0.004 (3) | −0.002 (3) | −0.001 (3) |
C1b | 0.027 (4) | 0.019 (3) | 0.021 (3) | 0.006 (3) | 0.004 (3) | 0.002 (3) |
C2b | 0.023 (4) | 0.025 (4) | 0.018 (3) | 0.007 (3) | −0.001 (3) | 0.002 (3) |
C3b | 0.028 (4) | 0.022 (4) | 0.017 (3) | 0.011 (3) | −0.000 (3) | 0.002 (3) |
C4b | 0.027 (4) | 0.021 (3) | 0.018 (3) | 0.004 (3) | 0.004 (3) | 0.002 (3) |
C5b | 0.028 (4) | 0.023 (4) | 0.022 (4) | 0.012 (3) | 0.006 (3) | 0.008 (3) |
C6b | 0.027 (4) | 0.020 (4) | 0.022 (4) | 0.004 (3) | −0.003 (3) | 0.001 (3) |
C7b | 0.026 (4) | 0.024 (4) | 0.016 (3) | 0.010 (3) | −0.000 (3) | 0.001 (3) |
C8b | 0.023 (4) | 0.024 (4) | 0.014 (3) | 0.013 (3) | 0.005 (3) | 0.006 (3) |
C9b | 0.020 (3) | 0.023 (3) | 0.017 (3) | 0.013 (3) | 0.000 (3) | 0.003 (3) |
C10b | 0.031 (4) | 0.019 (3) | 0.020 (3) | 0.004 (3) | 0.004 (3) | 0.000 (3) |
Cl1a—C5a | 1.740 (7) | C7a—C8a | 1.398 (8) |
Cl2a—C7a | 1.735 (6) | C8a—C9a | 1.401 (9) |
Cl1b—C5b | 1.733 (7) | C1b—C2b | 1.338 (9) |
Cl2b—C7b | 1.723 (6) | C2b—C3b | 1.464 (9) |
O1a—C1a | 1.344 (7) | C2b—C10b | 1.458 (9) |
O1a—C8a | 1.381 (8) | C3b—C9b | 1.465 (8) |
O2a—C3a | 1.229 (8) | C4b—C5b | 1.367 (9) |
O3a—C10a | 1.210 (9) | C4b—C9b | 1.405 (9) |
O1b—C1b | 1.363 (7) | C5b—C6b | 1.411 (9) |
O1b—C8b | 1.379 (8) | C6b—C7b | 1.376 (10) |
O2b—C3b | 1.233 (7) | C7b—C8b | 1.393 (8) |
O3b—C10b | 1.227 (9) | C8b—C9b | 1.412 (8) |
C1a—C2a | 1.356 (9) | C1a—H1a | 0.950 |
C2a—C3a | 1.467 (9) | C4a—H2a | 0.950 |
C2a—C10a | 1.490 (9) | C6a—H3a | 0.950 |
C3a—C9a | 1.459 (9) | C10a—H4a | 0.950 |
C4a—C5a | 1.355 (9) | C1b—H1b | 0.950 |
C4a—C9a | 1.416 (9) | C4b—H2b | 0.950 |
C5a—C6a | 1.401 (9) | C6b—H3b | 0.950 |
C6a—C7a | 1.373 (9) | C10b—H4b | 0.950 |
C1a—O1a—C8a | 118.3 (5) | C5b—C4b—C9b | 119.9 (6) |
C1b—O1b—C8b | 118.1 (5) | Cl1b—C5b—C4b | 120.6 (5) |
O1a—C1a—C2a | 124.6 (6) | Cl1b—C5b—C6b | 117.6 (5) |
C1a—C2a—C3a | 120.4 (6) | C4b—C5b—C6b | 121.9 (6) |
C1a—C2a—C10a | 118.9 (6) | C5b—C6b—C7b | 118.9 (6) |
C3a—C2a—C10a | 120.7 (6) | Cl2b—C7b—C6b | 120.4 (5) |
O2a—C3a—C2a | 122.6 (6) | Cl2b—C7b—C8b | 119.6 (5) |
O2a—C3a—C9a | 122.9 (6) | C6b—C7b—C8b | 120.0 (6) |
C2a—C3a—C9a | 114.5 (5) | O1b—C8b—C7b | 117.3 (5) |
C5a—C4a—C9a | 119.4 (6) | O1b—C8b—C9b | 121.6 (5) |
Cl1a—C5a—C4a | 120.3 (5) | C7b—C8b—C9b | 121.1 (6) |
Cl1a—C5a—C6a | 117.0 (5) | C3b—C9b—C4b | 121.9 (6) |
C4a—C5a—C6a | 122.7 (6) | C3b—C9b—C8b | 119.8 (6) |
C5a—C6a—C7a | 118.3 (6) | C4b—C9b—C8b | 118.2 (5) |
Cl2a—C7a—C6a | 120.3 (5) | O3b—C10b—C2b | 123.8 (6) |
Cl2a—C7a—C8a | 119.0 (5) | O1a—C1a—H1a | 117.700 |
C6a—C7a—C8a | 120.6 (6) | C2a—C1a—H1a | 117.702 |
O1a—C8a—C7a | 117.4 (5) | C5a—C4a—H2a | 120.314 |
O1a—C8a—C9a | 122.2 (5) | C9a—C4a—H2a | 120.307 |
C7a—C8a—C9a | 120.4 (6) | C5a—C6a—H3a | 120.850 |
C3a—C9a—C4a | 121.6 (6) | C7a—C6a—H3a | 120.844 |
C3a—C9a—C8a | 119.9 (6) | O3a—C10a—H4a | 118.481 |
C4a—C9a—C8a | 118.5 (6) | C2a—C10a—H4a | 118.489 |
O3a—C10a—C2a | 123.0 (6) | O1b—C1b—H1b | 117.382 |
O1b—C1b—C2b | 125.2 (6) | C2b—C1b—H1b | 117.374 |
C1b—C2b—C3b | 120.2 (6) | C5b—C4b—H2b | 120.070 |
C1b—C2b—C10b | 119.4 (6) | C9b—C4b—H2b | 120.068 |
C3b—C2b—C10b | 120.3 (6) | C5b—C6b—H3b | 120.568 |
O2b—C3b—C2b | 122.6 (6) | C7b—C6b—H3b | 120.567 |
O2b—C3b—C9b | 122.5 (6) | O3b—C10b—H4b | 118.104 |
C2b—C3b—C9b | 114.9 (5) | C2b—C10b—H4b | 118.102 |
C1a—O1a—C8a—C7a | −178.8 (6) | O1a—C8a—C9a—C3a | −1.4 (10) |
C1a—O1a—C8a—C9a | −0.7 (9) | O1a—C8a—C9a—C4a | 178.7 (6) |
C8a—O1a—C1a—C2a | 1.9 (10) | C7a—C8a—C9a—C3a | 176.7 (6) |
C8a—O1a—C1a—H1a | −178.1 | C7a—C8a—C9a—C4a | −3.2 (10) |
C1b—O1b—C8b—C7b | 180.0 (6) | O1b—C1b—C2b—C3b | −2.9 (11) |
C1b—O1b—C8b—C9b | 0.3 (9) | O1b—C1b—C2b—C10b | 176.3 (6) |
C8b—O1b—C1b—C2b | 2.5 (10) | H1b—C1b—C2b—C3b | 177.1 |
C8b—O1b—C1b—H1b | −177.5 | H1b—C1b—C2b—C10b | −3.7 |
O1a—C1a—C2a—C3a | −1.0 (11) | C1b—C2b—C3b—O2b | 178.7 (7) |
O1a—C1a—C2a—C10a | 178.3 (6) | C1b—C2b—C3b—C9b | 0.7 (10) |
H1a—C1a—C2a—C3a | 179.0 | C1b—C2b—C10b—O3b | 0.7 (11) |
H1a—C1a—C2a—C10a | −1.7 | C1b—C2b—C10b—H4b | −179.3 |
C1a—C2a—C3a—O2a | 178.4 (7) | C3b—C2b—C10b—O3b | 179.9 (7) |
C1a—C2a—C3a—C9a | −1.1 (10) | C3b—C2b—C10b—H4b | −0.1 |
C1a—C2a—C10a—O3a | −2.4 (11) | C10b—C2b—C3b—O2b | −0.4 (11) |
C1a—C2a—C10a—H4a | 177.6 | C10b—C2b—C3b—C9b | −178.5 (6) |
C3a—C2a—C10a—O3a | 176.9 (7) | O2b—C3b—C9b—C4b | 4.2 (11) |
C3a—C2a—C10a—H4a | −3.1 | O2b—C3b—C9b—C8b | −176.2 (6) |
C10a—C2a—C3a—O2a | −0.9 (11) | C2b—C3b—C9b—C4b | −177.7 (6) |
C10a—C2a—C3a—C9a | 179.7 (6) | C2b—C3b—C9b—C8b | 1.8 (9) |
O2a—C3a—C9a—C4a | 2.6 (11) | C5b—C4b—C9b—C3b | −177.7 (6) |
O2a—C3a—C9a—C8a | −177.3 (6) | C5b—C4b—C9b—C8b | 2.7 (10) |
C2a—C3a—C9a—C4a | −178.0 (6) | C9b—C4b—C5b—Cl1b | 178.8 (6) |
C2a—C3a—C9a—C8a | 2.2 (10) | C9b—C4b—C5b—C6b | −0.9 (11) |
C5a—C4a—C9a—C3a | −179.4 (6) | H2b—C4b—C5b—Cl1b | −1.2 |
C5a—C4a—C9a—C8a | 0.5 (11) | H2b—C4b—C5b—C6b | 179.1 |
C9a—C4a—C5a—Cl1a | −177.7 (6) | H2b—C4b—C9b—C3b | 2.3 |
C9a—C4a—C5a—C6a | 2.5 (11) | H2b—C4b—C9b—C8b | −177.3 |
H2a—C4a—C5a—Cl1a | 2.3 | Cl1b—C5b—C6b—C7b | 179.0 (5) |
H2a—C4a—C5a—C6a | −177.5 | Cl1b—C5b—C6b—H3b | −1.0 |
H2a—C4a—C9a—C3a | 0.6 | C4b—C5b—C6b—C7b | −1.3 (11) |
H2a—C4a—C9a—C8a | −179.5 | C4b—C5b—C6b—H3b | 178.6 |
Cl1a—C5a—C6a—C7a | 177.5 (5) | C5b—C6b—C7b—Cl2b | −179.1 (6) |
Cl1a—C5a—C6a—H3a | −2.5 | C5b—C6b—C7b—C8b | 1.6 (11) |
C4a—C5a—C6a—C7a | −2.7 (11) | H3b—C6b—C7b—Cl2b | 0.9 |
C4a—C5a—C6a—H3a | 177.3 | H3b—C6b—C7b—C8b | −178.4 |
C5a—C6a—C7a—Cl2a | −178.6 (6) | Cl2b—C7b—C8b—O1b | 1.3 (9) |
C5a—C6a—C7a—C8a | −0.1 (10) | Cl2b—C7b—C8b—C9b | −179.0 (5) |
H3a—C6a—C7a—Cl2a | 1.4 | C6b—C7b—C8b—O1b | −179.3 (6) |
H3a—C6a—C7a—C8a | 179.9 | C6b—C7b—C8b—C9b | 0.3 (11) |
Cl2a—C7a—C8a—O1a | −0.3 (9) | O1b—C8b—C9b—C3b | −2.4 (10) |
Cl2a—C7a—C8a—C9a | −178.5 (5) | O1b—C8b—C9b—C4b | 177.2 (6) |
C6a—C7a—C8a—O1a | −178.8 (6) | C7b—C8b—C9b—C3b | 178.0 (6) |
C6a—C7a—C8a—C9a | 3.0 (10) | C7b—C8b—C9b—C4b | −2.5 (10) |
D—H···A | D—H | H···A | D···A | D—H···A |
C4bi—H2bi···O2a | 0.95 | 2.35 | 3.246 (8) | 157 |
C4a—H2a···O2bi | 0.95 | 2.35 | 3.259 (8) | 160 |
Symmetry code: (i) −x+1, −y+1, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4bi—H2bi···O2a | 0.95 | 2.349 | 3.246 (8) | 157 |
C4a—H2a···O2bi | 0.95 | 2.349 | 3.259 (8) | 160 |
Symmetry code: (i) −x+1, −y+1, −z. |
Acknowledgements
We acknowledge the University of Shizuoka for instrumental support.
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6,8-Dichloro-3-formylchromone shows many biological functions such as protein tyrosine phosphatase inhibitory (Shim et al. 2003), tumor cell-cytotoxic, anti-HIV, anti-Helicobacter pylori, and urease inhibitory activities (Kawase et al. 2007). In addition, it is used as a starting material for the synthesis of biologically relevant molecules (Dückert et al. 2012).
The title compound, C10H4Cl2O3, crystallizes with two independent molecules in the asymmetric unit (Fig. 1). The mean deviations from the least-square planes for all atoms of molecule 1 and 2 are 0.0410 Å and 0.0449 Å, respectively. In addition, the largest deviations of molecule 1 and 2 are 0.1512 (17) Å for Cl1a and -0.0973 Å for H4b, respectively. This means that all atoms of each molecule are essentially coplanar.
In the crystal, the molecules 1 and 2 are linked to each other through intermolecular interactions of the Cl atoms at the 8-position with the O atoms of the formyl groups [Cl2a···O3bi; 3.033 (6) Å, Cl2bi···O3a; 3.044 (5) Å, C7a–Cl2a···O3bi = 160.4 (3)°, C7bi–Cl2bi···O3a =162.8 (3)°, C10a–O3a···Cl2bi = 138.7 (4)°, C10bi–O3bi···Cl2a = 139.6 (4)° (i): -x + 1, -y + 1, -z + 1], and the carbonyl O atoms at the 4-position with the C–H atoms at the 5-position. The short contacts and the geometries involved in the Cl atoms fall into halogen bonding (Auffinger et al. 2004). Due to these halogen and hydrogen bonds, the molecules form wavy bands along c axis, as shown in Fig. 2.
Halogen bonds have been found to occur in organic, inorganic, and biological systems, and have recently attracted much attention in medicinal chemistry, chemical biology, and supramolecular chemistry (Auffinger et al. 2004, Metrangolo et al. 2005, Wilcken et al. 2013). Our analysis suggests that the strong inhibitory activity of the title compound against urease may be attributable to the halogen bond observed in the crystal, because 3-formylchromones without any halogen atom at the 8-position in the literature do not show the urease inhibitory activity (Kawase et al. 2007).