organic compounds
Methyl 2-[(tert-butoxycarbonyl)amino]-3-(4-hydroxyphenyl)propanoate
aCollege of Pharmacy, Henan University of Traditional Chinese Medicine, Zhengzhou 450046, People's Republic of China
*Correspondence e-mail: li96052122@126.com
In the title molecule, C15H21NO5, the dihedral angle between the mean plane of the –N—C(=O)—O– group [maximum deviation = 0.002 (1) Å for the C atom] and the benzene ring is 82.2 (2)°. In the crystal, O—H⋯O and N—H⋯O hydrogen bonds connect the molecules, forming a two-dimensional network parallel to (001).
Experimental
Crystal data
|
|
Data collection: APEX2 (Bruker, 2007); cell APEX2; data reduction: SAINT (Bruker, 2007)'; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL and publCIF (Westrip, 2010).
Supporting information
10.1107/S160053681301979X/lh5632sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681301979X/lh5632Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681301979X/lh5632Isup3.cml
The title compound (0.3 mmol, 88.5 mg) was dissolved in 10 ml of methanol solution. Colorless block-shaped crystals separated after 5 d.
H atoms were included in calculated positions and treated as riding atoms: C—H = 0.93, 0.96 and 0.98 Å for CH(aromatic), CH3 and CH(methine) H atoms, respectively, or N—H = 0.86 Å and O—H = 0.82 Å with Uiso(H)= kUeq(parent C-atom, N), where k = 1.5 for CH3 and hydroxyl H atoms and k = 1.2 for all other H atoms. The absolute congiuration could not be determined from the X-ray data. In the absence of anamolous dispersion effects Friedel pairs were merged.
Data collection: APEX2 (Bruker, 2007); cell
APEX2 (Bruker, 2007); data reduction: SAINT (Bruker, 2007)'; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and publCIF (Westrip, 2010).C15H21NO5 | F(000) = 632 |
Mr = 295.33 | Dx = 1.244 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 9371 reflections |
a = 8.7879 (8) Å | θ = 1.0–27.6° |
b = 9.4844 (9) Å | µ = 0.09 mm−1 |
c = 18.9207 (18) Å | T = 100 K |
V = 1577.0 (3) Å3 | Block, colourless |
Z = 4 | 0.55 × 0.49 × 0.45 mm |
Bruker APEXII CCD diffractometer | 3636 independent reflections |
Radiation source: fine-focus sealed tube | 3469 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.072 |
ϕ and ω scans | θmax = 27.6°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→9 |
Tmin = 0.962, Tmax = 0.989 | k = −12→8 |
9339 measured reflections | l = −24→24 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0581P)2 + 0.1712P] where P = (Fo2 + 2Fc2)/3 |
3636 reflections | (Δ/σ)max = 0.008 |
190 parameters | Δρmax = 0.32 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C15H21NO5 | V = 1577.0 (3) Å3 |
Mr = 295.33 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 8.7879 (8) Å | µ = 0.09 mm−1 |
b = 9.4844 (9) Å | T = 100 K |
c = 18.9207 (18) Å | 0.55 × 0.49 × 0.45 mm |
Bruker APEXII CCD diffractometer | 3636 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3469 reflections with I > 2σ(I) |
Tmin = 0.962, Tmax = 0.989 | Rint = 0.072 |
9339 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.32 e Å−3 |
3636 reflections | Δρmin = −0.20 e Å−3 |
190 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | −0.04196 (17) | 1.13511 (15) | 0.18071 (7) | 0.0216 (3) | |
H1A | −0.1123 | 1.1434 | 0.2172 | 0.026* | |
C2 | −0.03335 (16) | 1.01206 (15) | 0.14197 (7) | 0.0205 (3) | |
H2A | −0.0978 | 0.9376 | 0.1531 | 0.025* | |
C3 | 0.07017 (15) | 0.99675 (14) | 0.08627 (7) | 0.0172 (3) | |
C4 | 0.16908 (15) | 1.10800 (15) | 0.07254 (7) | 0.0192 (3) | |
H4A | 0.2409 | 1.0991 | 0.0367 | 0.023* | |
C5 | 0.16250 (16) | 1.23229 (15) | 0.11142 (7) | 0.0200 (3) | |
H5A | 0.2297 | 1.3055 | 0.1016 | 0.024* | |
C6 | 0.05528 (16) | 1.24689 (14) | 0.16488 (7) | 0.0184 (3) | |
C7 | 0.06700 (17) | 0.86702 (15) | 0.04022 (7) | 0.0188 (3) | |
H7A | 0.1336 | 0.8823 | 0.0001 | 0.023* | |
H7B | −0.0354 | 0.8547 | 0.0221 | 0.023* | |
C8 | 0.11575 (14) | 0.73007 (14) | 0.07772 (7) | 0.0166 (3) | |
H8A | 0.0573 | 0.7217 | 0.1216 | 0.020* | |
C9 | 0.33960 (15) | 0.64306 (14) | 0.13963 (7) | 0.0159 (3) | |
C10 | 0.59030 (15) | 0.56854 (15) | 0.18449 (7) | 0.0199 (3) | |
C11 | 0.5429 (2) | 0.5555 (2) | 0.26171 (8) | 0.0302 (3) | |
H11A | 0.5434 | 0.6471 | 0.2833 | 0.045* | |
H11B | 0.6131 | 0.4950 | 0.2861 | 0.045* | |
H11C | 0.4424 | 0.5161 | 0.2644 | 0.045* | |
C12 | 0.59178 (18) | 0.42703 (17) | 0.14678 (8) | 0.0280 (3) | |
H12A | 0.6225 | 0.4403 | 0.0985 | 0.042* | |
H12B | 0.4917 | 0.3866 | 0.1480 | 0.042* | |
H12C | 0.6621 | 0.3649 | 0.1699 | 0.042* | |
C13 | 0.74355 (17) | 0.64103 (19) | 0.17817 (9) | 0.0305 (3) | |
H13A | 0.7714 | 0.6480 | 0.1292 | 0.046* | |
H13B | 0.8190 | 0.5872 | 0.2030 | 0.046* | |
H13C | 0.7373 | 0.7338 | 0.1982 | 0.046* | |
C14 | 0.1469 (2) | 0.42237 (17) | −0.04498 (8) | 0.0292 (3) | |
H14A | 0.2370 | 0.3749 | −0.0609 | 0.044* | |
H14B | 0.0943 | 0.4618 | −0.0848 | 0.044* | |
H14C | 0.0816 | 0.3563 | −0.0213 | 0.044* | |
C15 | 0.07176 (16) | 0.60783 (14) | 0.02939 (7) | 0.0180 (3) | |
N1 | 0.27499 (13) | 0.73700 (12) | 0.09567 (6) | 0.0170 (2) | |
H1B | 0.3301 | 0.8029 | 0.0778 | 0.020* | |
O1 | 0.04029 (13) | 1.36708 (11) | 0.20398 (5) | 0.0247 (2) | |
H1C | 0.1090 | 1.4220 | 0.1939 | 0.037* | |
O2 | 0.18880 (11) | 0.53485 (11) | 0.00379 (5) | 0.0221 (2) | |
O3 | −0.05943 (13) | 0.58394 (11) | 0.01458 (6) | 0.0254 (2) | |
O4 | 0.48955 (11) | 0.66726 (10) | 0.14566 (5) | 0.0186 (2) | |
O5 | 0.27010 (12) | 0.54940 (10) | 0.16994 (5) | 0.0204 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0215 (7) | 0.0263 (7) | 0.0171 (6) | −0.0023 (6) | 0.0044 (5) | 0.0007 (5) |
C2 | 0.0205 (6) | 0.0205 (6) | 0.0206 (6) | −0.0054 (5) | 0.0015 (5) | 0.0015 (5) |
C3 | 0.0161 (6) | 0.0182 (6) | 0.0172 (6) | 0.0019 (5) | −0.0039 (5) | 0.0011 (5) |
C4 | 0.0145 (6) | 0.0235 (7) | 0.0195 (6) | 0.0009 (5) | 0.0020 (5) | 0.0009 (5) |
C5 | 0.0176 (6) | 0.0208 (6) | 0.0217 (6) | −0.0034 (5) | 0.0006 (5) | 0.0018 (5) |
C6 | 0.0200 (6) | 0.0185 (6) | 0.0167 (5) | −0.0002 (5) | −0.0023 (5) | 0.0006 (5) |
C7 | 0.0179 (6) | 0.0208 (6) | 0.0178 (6) | 0.0018 (5) | −0.0025 (5) | −0.0009 (5) |
C8 | 0.0116 (6) | 0.0203 (6) | 0.0178 (6) | −0.0004 (5) | −0.0014 (5) | −0.0005 (5) |
C9 | 0.0152 (6) | 0.0171 (6) | 0.0155 (5) | −0.0002 (5) | 0.0007 (5) | −0.0038 (5) |
C10 | 0.0145 (6) | 0.0248 (7) | 0.0206 (6) | 0.0027 (5) | −0.0050 (5) | 0.0017 (5) |
C11 | 0.0281 (8) | 0.0429 (9) | 0.0196 (6) | 0.0005 (7) | −0.0040 (6) | 0.0012 (6) |
C12 | 0.0281 (8) | 0.0264 (7) | 0.0296 (7) | 0.0064 (6) | −0.0033 (6) | 0.0000 (6) |
C13 | 0.0146 (7) | 0.0421 (9) | 0.0348 (8) | −0.0032 (6) | −0.0069 (6) | 0.0052 (7) |
C14 | 0.0364 (9) | 0.0281 (7) | 0.0232 (7) | −0.0031 (7) | 0.0026 (6) | −0.0084 (6) |
C15 | 0.0164 (6) | 0.0189 (6) | 0.0188 (6) | −0.0003 (5) | −0.0011 (5) | 0.0037 (5) |
N1 | 0.0129 (5) | 0.0185 (5) | 0.0196 (5) | −0.0023 (4) | −0.0008 (4) | 0.0012 (4) |
O1 | 0.0269 (5) | 0.0215 (5) | 0.0256 (5) | −0.0057 (4) | 0.0063 (4) | −0.0059 (4) |
O2 | 0.0191 (5) | 0.0249 (5) | 0.0224 (5) | −0.0012 (4) | 0.0020 (4) | −0.0060 (4) |
O3 | 0.0179 (5) | 0.0250 (5) | 0.0333 (5) | −0.0016 (4) | −0.0080 (4) | −0.0020 (4) |
O4 | 0.0123 (4) | 0.0210 (5) | 0.0223 (4) | −0.0010 (3) | −0.0038 (4) | 0.0031 (4) |
O5 | 0.0175 (5) | 0.0214 (5) | 0.0221 (4) | −0.0027 (4) | 0.0013 (4) | 0.0028 (4) |
C1—C2 | 1.380 (2) | C10—O4 | 1.4834 (16) |
C1—C6 | 1.3942 (19) | C10—C13 | 1.517 (2) |
C1—H1A | 0.9300 | C10—C12 | 1.520 (2) |
C2—C3 | 1.3997 (19) | C10—C11 | 1.524 (2) |
C2—H2A | 0.9300 | C11—H11A | 0.9600 |
C3—C4 | 1.3915 (19) | C11—H11B | 0.9600 |
C3—C7 | 1.5079 (18) | C11—H11C | 0.9600 |
C4—C5 | 1.391 (2) | C12—H12A | 0.9600 |
C4—H4A | 0.9300 | C12—H12B | 0.9600 |
C5—C6 | 1.3893 (19) | C12—H12C | 0.9600 |
C5—H5A | 0.9300 | C13—H13A | 0.9600 |
C6—O1 | 1.3653 (16) | C13—H13B | 0.9600 |
C7—C8 | 1.5408 (19) | C13—H13C | 0.9600 |
C7—H7A | 0.9700 | C14—O2 | 1.4578 (17) |
C7—H7B | 0.9700 | C14—H14A | 0.9600 |
C8—N1 | 1.4415 (16) | C14—H14B | 0.9600 |
C8—C15 | 1.5265 (18) | C14—H14C | 0.9600 |
C8—H8A | 0.9800 | C15—O3 | 1.2079 (18) |
C9—O5 | 1.2210 (17) | C15—O2 | 1.3309 (17) |
C9—O4 | 1.3424 (16) | N1—H1B | 0.8600 |
C9—N1 | 1.3447 (17) | O1—H1C | 0.8200 |
C2—C1—C6 | 119.69 (13) | O4—C10—C11 | 111.29 (12) |
C2—C1—H1A | 120.2 | C13—C10—C11 | 110.79 (12) |
C6—C1—H1A | 120.2 | C12—C10—C11 | 112.37 (13) |
C1—C2—C3 | 121.55 (13) | C10—C11—H11A | 109.5 |
C1—C2—H2A | 119.2 | C10—C11—H11B | 109.5 |
C3—C2—H2A | 119.2 | H11A—C11—H11B | 109.5 |
C4—C3—C2 | 117.90 (12) | C10—C11—H11C | 109.5 |
C4—C3—C7 | 121.49 (12) | H11A—C11—H11C | 109.5 |
C2—C3—C7 | 120.51 (12) | H11B—C11—H11C | 109.5 |
C5—C4—C3 | 121.20 (12) | C10—C12—H12A | 109.5 |
C5—C4—H4A | 119.4 | C10—C12—H12B | 109.5 |
C3—C4—H4A | 119.4 | H12A—C12—H12B | 109.5 |
C6—C5—C4 | 119.85 (12) | C10—C12—H12C | 109.5 |
C6—C5—H5A | 120.1 | H12A—C12—H12C | 109.5 |
C4—C5—H5A | 120.1 | H12B—C12—H12C | 109.5 |
O1—C6—C5 | 122.90 (12) | C10—C13—H13A | 109.5 |
O1—C6—C1 | 117.34 (12) | C10—C13—H13B | 109.5 |
C5—C6—C1 | 119.75 (12) | H13A—C13—H13B | 109.5 |
C3—C7—C8 | 114.62 (10) | C10—C13—H13C | 109.5 |
C3—C7—H7A | 108.6 | H13A—C13—H13C | 109.5 |
C8—C7—H7A | 108.6 | H13B—C13—H13C | 109.5 |
C3—C7—H7B | 108.6 | O2—C14—H14A | 109.5 |
C8—C7—H7B | 108.6 | O2—C14—H14B | 109.5 |
H7A—C7—H7B | 107.6 | H14A—C14—H14B | 109.5 |
N1—C8—C15 | 114.93 (11) | O2—C14—H14C | 109.5 |
N1—C8—C7 | 109.87 (11) | H14A—C14—H14C | 109.5 |
C15—C8—C7 | 107.10 (10) | H14B—C14—H14C | 109.5 |
N1—C8—H8A | 108.2 | O3—C15—O2 | 123.75 (13) |
C15—C8—H8A | 108.2 | O3—C15—C8 | 121.54 (12) |
C7—C8—H8A | 108.2 | O2—C15—C8 | 114.67 (11) |
O5—C9—O4 | 125.14 (13) | C9—N1—C8 | 121.70 (11) |
O5—C9—N1 | 124.15 (13) | C9—N1—H1B | 119.2 |
O4—C9—N1 | 110.71 (12) | C8—N1—H1B | 119.2 |
O4—C10—C13 | 101.82 (11) | C6—O1—H1C | 109.5 |
O4—C10—C12 | 109.26 (11) | C15—O2—C14 | 114.55 (12) |
C13—C10—C12 | 110.83 (13) | C9—O4—C10 | 121.33 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···O3i | 0.86 | 2.27 | 3.0583 (16) | 153 |
O1—H1C···O5ii | 0.82 | 1.92 | 2.7356 (15) | 180 |
Symmetry codes: (i) x+1/2, −y+3/2, −z; (ii) x, y+1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···O3i | 0.86 | 2.27 | 3.0583 (16) | 153 |
O1—H1C···O5ii | 0.82 | 1.92 | 2.7356 (15) | 180 |
Symmetry codes: (i) x+1/2, −y+3/2, −z; (ii) x, y+1, z. |
Acknowledgements
The author thanks Henan University of Traditional Chinese Medicine for supporting this study.
References
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sykes, B. M., Atwell, G. J., Hogg, A., Wilson, W. R., O'Connor, C. J. & Denny, W. A. (1999). J. Med. Chem. 42, 346-355. Web of Science CrossRef CAS PubMed Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Amide, ester and hydroxyl groups widely exist in many biologically active compounds or can be utilized in prodrugs (Sykes et al., 1999). Herein we report the crystal structure of the title compound. The dihedral angle between the mean-plane of the amide group (N1/C9/O5/O4) [a maximum deviation of 0.002 (1)° for C9) and the benzene ring (C1–C6) is 82.2 (2)°. In the crystal, O—H···O and N—H···O hydrogen bonds connect molecules forming a two-dimensional network parallel to (001) (Fig. 2).