organic compounds
2,5-Bis{[(–)-(S)-1-(4-methylphenyl)ethyl]iminomethyl}thiophene
aDEP Facultad de Ciencias Químicas, UANL, Guerrero y Progreso S/N, Col. Treviño, 64570 Monterrey, NL, Mexico, bLaboratorio de Síntesis de Complejos, Facultad de Ciencias Químicas, Universidad Autónoma de Puebla, PO Box 156, 72001 Puebla, Pue., Mexico, and cIngeniería Bioquímica, Instituto Tecnológico Superior de Atlixco, 74218 Atlixco, Pue., Mexico
*Correspondence e-mail: sylvain_bernes@Hotmail.com
The title chiral bis-aldimine, C24H26N2S, was synthesized using a solvent-free Schiff condensation. The molecule displays crystallographic C2 symmetry, with the S atom lying on the twofold axis parallel to [100]. As a consequence of the (S,S) stereochemistry, the tolyl groups are oriented towards opposite faces of the thiophene core, giving a twisted conformation for the whole molecule. Molecules are arranged in the crystal in a herringbone-like pattern, without any significant intermolecular contacts.
Related literature
For the solvent-free approach in organic synthesis, see: Tanaka & Toda (2000). For the structure of a chiral bis-aldimine compound, see: Espinosa Leija et al. (2009). For structures of thiophenes substituted in positions 2 and 5 by imine functionalities, see: Skene & Dufresne (2006); Fridman & Kaftory (2007); de Lima et al. (2010); Kudyakova et al. (2011, 2012).
Experimental
Crystal data
|
Data collection: XSCANS (Siemens, 1996); cell XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXS2013 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL2013.
Supporting information
10.1107/S1600536813021685/nc2315sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813021685/nc2315Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813021685/nc2315Isup3.cml
Under solvent-free conditions, a mixture of 2,5-thiophenedicarboxaldehyde (100 mg, 0.71 mmol) and (S)-(–)-1-(4-methylphenyl)ethylamine (192 mg, 1.42 mmol) in a 1:2 molar ratio were mixed at room temperature, giving a brownish solid. The crude was recrystallized from CH2Cl2, affording colorless crystals of the title compound, in 91% yield. M.p. 150–152 °C. Spectroscopic data: [α]25D = +59.9 (c 1, CHCl3). IR (KBr): 1624 cm-1 (C═N). 1H-NMR (400 MHz, CDCl3/TMS, p.p.m.): δ = 1.54–1.55 (d, 6H, CHCH3), 2.33 (s, 6H, PhCH3), 4.46, 4.51 (q, 2H, CH), 7.13–7.29 (m, 10H, Ar), 8.34 (s, 2H, HC═N). 13C-NMR (100 MHz, CDCl3/TMS, p.p.m.): δ = 21.0 (CCH3), 30.9 (PhCH3), 69.0 (CHCH3), 126.5 (Ar), 129.0 (Ar), 129.7 (Ar), 136.4 (Ar), 141.9 (Ar), 145.1 (Ar), 152.2 (HC═N). MS—EI: m/z = 374 (M+).
All C-bonded H atoms were placed in idealized positions and refined as riding to their carrier C atoms, with bond lengths fixed to 0.93 (aromatic CH), 0.96 (methyl CH3), and 0.98 Å (methine CH). Isotropic displacement parameters were calculated as Uiso(H) = 1.5Ueq(C7, C14) for methyl groups and Uiso(H) = 1.2Ueq(carrier C) for other H atoms. The
was assigned from the known configuration of the chiral amine used as starting material. The was confirmed through the Parsons-Flack test (Parsons & Flack, 2004).Data collection: XSCANS (Siemens, 1996); cell
XSCANS (Siemens, 1996); data reduction: XSCANS (Siemens, 1996); program(s) used to solve structure: SHELXS2013 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL2013 (Sheldrick, 2008).C24H26N2S | Dx = 1.166 Mg m−3 |
Mr = 374.53 | Melting point: 423 K |
Orthorhombic, P22121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2bc 2 | Cell parameters from 71 reflections |
a = 6.278 (3) Å | θ = 4.2–12.3° |
b = 7.900 (3) Å | µ = 0.16 mm−1 |
c = 21.500 (7) Å | T = 298 K |
V = 1066.4 (7) Å3 | Plate, colourless |
Z = 2 | 0.50 × 0.32 × 0.10 mm |
F(000) = 400 |
Bruker P4 diffractometer | 1352 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.066 |
Graphite monochromator | θmax = 25.1°, θmin = 1.9° |
2θ/ω scans | h = −7→5 |
Absorption correction: ψ scan (XSCANS; Siemens, 1996) | k = −9→9 |
Tmin = 0.754, Tmax = 0.985 | l = −25→25 |
3046 measured reflections | 3 standard reflections every 97 reflections |
1767 independent reflections | intensity decay: 2.5% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.052 | H-atom parameters constrained |
wR(F2) = 0.155 | w = 1/[σ2(Fo2) + (0.0559P)2 + 0.760P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max < 0.001 |
1767 reflections | Δρmax = 0.22 e Å−3 |
125 parameters | Δρmin = −0.26 e Å−3 |
0 restraints | Absolute structure: Flack x determined using 412 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons & Flack, 2004) |
0 constraints | Absolute structure parameter: −0.08 (18) |
Primary atom site location: structure-invariant direct methods |
C24H26N2S | V = 1066.4 (7) Å3 |
Mr = 374.53 | Z = 2 |
Orthorhombic, P22121 | Mo Kα radiation |
a = 6.278 (3) Å | µ = 0.16 mm−1 |
b = 7.900 (3) Å | T = 298 K |
c = 21.500 (7) Å | 0.50 × 0.32 × 0.10 mm |
Bruker P4 diffractometer | 1352 reflections with I > 2σ(I) |
Absorption correction: ψ scan (XSCANS; Siemens, 1996) | Rint = 0.066 |
Tmin = 0.754, Tmax = 0.985 | 3 standard reflections every 97 reflections |
3046 measured reflections | intensity decay: 2.5% |
1767 independent reflections |
R[F2 > 2σ(F2)] = 0.052 | H-atom parameters constrained |
wR(F2) = 0.155 | Δρmax = 0.22 e Å−3 |
S = 1.06 | Δρmin = −0.26 e Å−3 |
1767 reflections | Absolute structure: Flack x determined using 412 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons & Flack, 2004) |
125 parameters | Absolute structure parameter: −0.08 (18) |
0 restraints |
x | y | z | Uiso*/Ueq | ||
S1 | 0.6440 (3) | 0.5000 | 1.0000 | 0.0580 (5) | |
C2 | 0.8347 (8) | 0.3700 (6) | 0.9686 (2) | 0.0536 (12) | |
C3 | 1.0327 (8) | 0.4251 (7) | 0.9825 (2) | 0.0645 (15) | |
H3B | 1.1562 | 0.3696 | 0.9701 | 0.077* | |
C4 | 0.7765 (9) | 0.2268 (7) | 0.9303 (2) | 0.0579 (13) | |
H4A | 0.8834 | 0.1535 | 0.9172 | 0.069* | |
N5 | 0.5897 (7) | 0.1971 (6) | 0.91410 (19) | 0.0578 (11) | |
C6 | 0.5569 (9) | 0.0468 (7) | 0.8745 (2) | 0.0651 (15) | |
H6B | 0.6951 | 0.0064 | 0.8594 | 0.078* | |
C7 | 0.4544 (14) | −0.0898 (8) | 0.9141 (3) | 0.099 (2) | |
H7B | 0.5485 | −0.1196 | 0.9476 | 0.148* | |
H7C | 0.4271 | −0.1879 | 0.8890 | 0.148* | |
H7D | 0.3226 | −0.0483 | 0.9309 | 0.148* | |
C8 | 0.4176 (8) | 0.0904 (6) | 0.8199 (2) | 0.0540 (12) | |
C9 | 0.2393 (8) | 0.1892 (7) | 0.8261 (2) | 0.0605 (14) | |
H9B | 0.2074 | 0.2369 | 0.8645 | 0.073* | |
C10 | 0.1074 (9) | 0.2188 (8) | 0.7765 (3) | 0.0665 (14) | |
H10A | −0.0132 | 0.2855 | 0.7822 | 0.080* | |
C11 | 0.1489 (9) | 0.1524 (7) | 0.7186 (3) | 0.0627 (13) | |
C12 | 0.3281 (10) | 0.0573 (7) | 0.7125 (2) | 0.0697 (15) | |
H12D | 0.3618 | 0.0133 | 0.6736 | 0.084* | |
C13 | 0.4616 (9) | 0.0235 (8) | 0.7617 (2) | 0.0657 (14) | |
H13D | 0.5812 | −0.0441 | 0.7559 | 0.079* | |
C14 | 0.0019 (11) | 0.1849 (9) | 0.6647 (3) | 0.091 (2) | |
H14A | 0.0789 | 0.1720 | 0.6265 | 0.136* | |
H14B | −0.0533 | 0.2980 | 0.6675 | 0.136* | |
H14C | −0.1138 | 0.1055 | 0.6659 | 0.136* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0456 (10) | 0.0627 (11) | 0.0658 (10) | 0.000 | 0.000 | −0.0035 (10) |
C2 | 0.051 (3) | 0.062 (3) | 0.048 (2) | 0.001 (3) | 0.001 (2) | −0.004 (2) |
C3 | 0.046 (3) | 0.085 (4) | 0.062 (3) | 0.005 (3) | 0.002 (2) | −0.018 (3) |
C4 | 0.056 (3) | 0.063 (3) | 0.055 (3) | 0.005 (3) | 0.002 (2) | −0.004 (3) |
N5 | 0.059 (3) | 0.057 (3) | 0.057 (2) | 0.002 (2) | −0.007 (2) | −0.006 (2) |
C6 | 0.068 (3) | 0.064 (4) | 0.064 (3) | 0.006 (3) | −0.017 (3) | −0.011 (3) |
C7 | 0.151 (7) | 0.063 (4) | 0.082 (4) | −0.013 (4) | −0.040 (5) | 0.012 (3) |
C8 | 0.055 (3) | 0.048 (3) | 0.059 (3) | 0.000 (2) | 0.001 (2) | −0.005 (2) |
C9 | 0.056 (3) | 0.068 (3) | 0.057 (3) | 0.004 (3) | 0.006 (2) | −0.009 (3) |
C10 | 0.056 (3) | 0.063 (3) | 0.080 (3) | 0.007 (3) | 0.000 (3) | −0.005 (3) |
C11 | 0.064 (3) | 0.055 (3) | 0.068 (3) | −0.009 (3) | −0.010 (3) | 0.000 (3) |
C12 | 0.080 (4) | 0.069 (4) | 0.059 (3) | 0.000 (3) | −0.002 (3) | −0.009 (3) |
C13 | 0.064 (3) | 0.066 (3) | 0.067 (3) | 0.015 (3) | −0.003 (2) | −0.018 (3) |
C14 | 0.098 (5) | 0.087 (5) | 0.088 (4) | −0.005 (4) | −0.032 (4) | 0.008 (4) |
S1—C2 | 1.716 (5) | C8—C9 | 1.371 (7) |
S1—C2i | 1.716 (5) | C8—C13 | 1.387 (7) |
C2—C3 | 1.350 (7) | C9—C10 | 1.370 (7) |
C2—C4 | 1.446 (7) | C9—H9B | 0.9300 |
C3—C3i | 1.403 (10) | C10—C11 | 1.377 (8) |
C3—H3B | 0.9300 | C10—H10A | 0.9300 |
C4—N5 | 1.246 (6) | C11—C12 | 1.359 (8) |
C4—H4A | 0.9300 | C11—C14 | 1.502 (8) |
N5—C6 | 1.475 (7) | C12—C13 | 1.374 (8) |
C6—C8 | 1.504 (7) | C12—H12D | 0.9300 |
C6—C7 | 1.518 (9) | C13—H13D | 0.9300 |
C6—H6B | 0.9800 | C14—H14A | 0.9600 |
C7—H7B | 0.9600 | C14—H14B | 0.9600 |
C7—H7C | 0.9600 | C14—H14C | 0.9600 |
C7—H7D | 0.9600 | ||
C2—S1—C2i | 91.5 (3) | C9—C8—C6 | 122.0 (5) |
C3—C2—C4 | 127.6 (5) | C13—C8—C6 | 120.1 (5) |
C3—C2—S1 | 111.2 (4) | C10—C9—C8 | 121.1 (5) |
C4—C2—S1 | 121.1 (4) | C10—C9—H9B | 119.5 |
C2—C3—C3i | 113.0 (3) | C8—C9—H9B | 119.5 |
C2—C3—H3B | 123.5 | C9—C10—C11 | 121.6 (5) |
C3i—C3—H3B | 123.5 | C9—C10—H10A | 119.2 |
N5—C4—C2 | 123.0 (5) | C11—C10—H10A | 119.2 |
N5—C4—H4A | 118.5 | C12—C11—C10 | 117.0 (5) |
C2—C4—H4A | 118.5 | C12—C11—C14 | 122.0 (6) |
C4—N5—C6 | 116.4 (4) | C10—C11—C14 | 121.0 (6) |
N5—C6—C8 | 110.3 (4) | C11—C12—C13 | 122.6 (5) |
N5—C6—C7 | 107.9 (4) | C11—C12—H12D | 118.7 |
C8—C6—C7 | 110.7 (5) | C13—C12—H12D | 118.7 |
N5—C6—H6B | 109.3 | C12—C13—C8 | 119.9 (5) |
C8—C6—H6B | 109.3 | C12—C13—H13D | 120.0 |
C7—C6—H6B | 109.3 | C8—C13—H13D | 120.0 |
C6—C7—H7B | 109.5 | C11—C14—H14A | 109.5 |
C6—C7—H7C | 109.5 | C11—C14—H14B | 109.5 |
H7B—C7—H7C | 109.5 | H14A—C14—H14B | 109.5 |
C6—C7—H7D | 109.5 | C11—C14—H14C | 109.5 |
H7B—C7—H7D | 109.5 | H14A—C14—H14C | 109.5 |
H7C—C7—H7D | 109.5 | H14B—C14—H14C | 109.5 |
C9—C8—C13 | 117.8 (5) | ||
C2i—S1—C2—C3 | 0.5 (3) | C7—C6—C8—C13 | −100.2 (6) |
C2i—S1—C2—C4 | −177.0 (5) | C13—C8—C9—C10 | 0.9 (8) |
C4—C2—C3—C3i | 176.0 (5) | C6—C8—C9—C10 | −175.9 (5) |
S1—C2—C3—C3i | −1.3 (7) | C8—C9—C10—C11 | −0.6 (9) |
C3—C2—C4—N5 | −171.3 (5) | C9—C10—C11—C12 | −0.7 (9) |
S1—C2—C4—N5 | 5.7 (7) | C9—C10—C11—C14 | 179.6 (6) |
C2—C4—N5—C6 | 179.4 (4) | C10—C11—C12—C13 | 1.6 (9) |
C4—N5—C6—C8 | −132.6 (5) | C14—C11—C12—C13 | −178.6 (6) |
C4—N5—C6—C7 | 106.3 (6) | C11—C12—C13—C8 | −1.4 (9) |
N5—C6—C8—C9 | −42.7 (7) | C9—C8—C13—C12 | 0.0 (8) |
C7—C6—C8—C9 | 76.6 (7) | C6—C8—C13—C12 | 176.9 (5) |
N5—C6—C8—C13 | 140.5 (5) |
Symmetry code: (i) x, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C24H26N2S |
Mr | 374.53 |
Crystal system, space group | Orthorhombic, P22121 |
Temperature (K) | 298 |
a, b, c (Å) | 6.278 (3), 7.900 (3), 21.500 (7) |
V (Å3) | 1066.4 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.16 |
Crystal size (mm) | 0.50 × 0.32 × 0.10 |
Data collection | |
Diffractometer | Bruker P4 diffractometer |
Absorption correction | ψ scan (XSCANS; Siemens, 1996) |
Tmin, Tmax | 0.754, 0.985 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3046, 1767, 1352 |
Rint | 0.066 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.155, 1.06 |
No. of reflections | 1767 |
No. of parameters | 125 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.22, −0.26 |
Absolute structure | Flack x determined using 412 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons & Flack, 2004) |
Absolute structure parameter | −0.08 (18) |
Computer programs: XSCANS (Siemens, 1996), SHELXS2013 (Sheldrick, 2008), SHELXL2013 (Sheldrick, 2008), Mercury (Macrae et al., 2008).
Acknowledgements
Support from VIEP-UAP (GUPJ-NAT12-G) is acknowledged.
References
Espinosa Leija, A., Bernès, S., Hernández, G., Sharma, P., Peña, U. & Gutiérrez, R. (2009). Acta Cryst. E65, o2317. Web of Science CSD CrossRef IUCr Journals Google Scholar
Fridman, N. & Kaftory, M. (2007). Pol. J. Chem. 81, 825–832. CAS Google Scholar
Kudyakova, Yu. S., Burgart, Ya. V. & Saloutin, V. I. (2011). Chem. Heterocycl. Compd, 47, 558–563. CrossRef CAS Google Scholar
Kudyakova, Y. S., Burgart, Y. V., Slepukhin, P. A. & Saloutin, V. I. (2012). Mendeleev Commun. 22, 284–286. Web of Science CSD CrossRef CAS Google Scholar
Lima, G. M. de, Harrison, W. T. A., Tiekink, E. R. T., Wardell, J. L. & Wardell, S. M. S. V. (2010). Acta Cryst. E66, o504–o505. Web of Science CSD CrossRef IUCr Journals Google Scholar
Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470. Web of Science CrossRef CAS IUCr Journals Google Scholar
Parsons, S. & Flack, H. (2004). Acta Cryst. A60, s61. CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Siemens (1996). XSCANS. Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA. Google Scholar
Skene, W. G. & Dufresne, S. (2006). Acta Cryst. E62, o1116–o1117. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Tanaka, K. & Toda, F. (2000). Chem. Rev. 100, 1025–1074. Web of Science CrossRef PubMed CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In the last few years, our attention has been focused on the synthesis and structure of chiral bis-imines (e.g. Espinosa Leija et al., 2009), mostly due to their versatile coordination behavior and interesting properties as ligands for building of chiral metal complexes. Along this line, the title compound was synthesized through a Schiff condensation between a low-melting point dialdehyde and a liquid amine having a high boiling-point (above 200 °C), which also serves as a solvent for the reaction. No other solvents were used for the reaction (Tanaka & Toda, 2000).
The crude compound crystallized from CH2Cl2, allowing to determine its chiral purity and crystal structure. The obtained bis-aldimine is the expected (S,S) diastereoisomer, with imine bonds in the common E configuration (Fig. 1). The molecule is placed on the 2-fold axis of space group P22121, with the S atom lying on the symmetry axis. The resulting molecular conformation displays the C2 symmetry, with imine arms oriented towards opposite sides of the central thiophene core ring. Other thiophenes substituted in positions 2 and 5 by imine groups have been characterized (e.g. Skene & Dufresne, 2006; Fridman & Kaftory, 2007; de Lima et al., 2010; Kudyakova et al., 2011, 2012). However, all were achiral compounds, and only one actually presented a crystallographic C2 symmetry (space group C2/c, Kudyakova et al., 2011), as in the title compound.
The molecules are arranged in the crystal in such a way they form a herringbone-like structure (Fig. 2). However, no actual supramolecular pattern is formed in the solid-state, since no intermolecular contacts of significant strength are present.