organic compounds
1,2:5,6-Di-O-isopropylidene-3-C-methyl-α-D-allofuranose
aDepartamento de Química Orgânica, Instituto de Química, Universidade Federal Fluminense, Niterói – RJ, CEP 24020-150, Brazil, and bDepartamento de Química Inorgânica, Instituto de Química, Universidade Federal Fluminense, Niterói – RJ, CEP 24020-150, Brazil
*Correspondence e-mail: fernand@vm.uff.br
The title carbohydrate, C13H22O6, is a derivative of D-glycose, in which the furanosidic and isopropylidene rings are in twisted conformations. The mean plane of the furanosidic ring makes a dihedral angle of 70.32 (18)° with the mean plane of the fused isopropylidene ring. The methyl groups in the other isopropylidene ring are disordered over two sets of sites, with an occupancy ratio of 0.74 (6):0.26 (6). In the crystal, molecules are linked by O—H⋯O hydrogen bonds into chains with graph-set notation C(5) along [100]. Weak C—H⋯O interactions also occur.
Related literature
For background information on this class of compound, see: Bio et al. (2004); Canuto et al. (2007); Mane et al. (2008); Yoneda et al. (2011). For details of ring-puckering calculations, see: Cremer & Pople (1975). Graph-set notation for the description of hydrogen-bonding motifs is given by Bernstein et al. (1995).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: COLLECT (Nonius, 2004); cell DIRAX/LSQ (Duisenberg, 1992); data reduction: EVALCCD (Duisenberg et al., 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2013); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).
Supporting information
10.1107/S1600536813022447/pk2484sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813022447/pk2484Isup2.hkl
The reaction for obtaining the title compound was taken under nitrogen in a tritubulate vessel. To it, 2.64 ml (3.95 mmol) of methyl magnesium bromide 3 M diluted in THF (7.9 mmol, 2 eq) was added. Then, under vigorous stirring and in a ice bath, 3.96 mmol (1.02 g) diluted in dry THF was poured into the solution. The reaction took place for 5 h in room temperature. After finishing the reaction, it was slowly added dropwise 10 ml of distilled water and 1 g of Celite, filtering the resultant product in a Celite layer. The THF solvent was removed by heat. The aqueous phase was extracted with CH2Cl2 (3 × 30 ml) and the product washed with distilled water (3 × 20 ml), dried with MgSO4 anhydrous and the solvent eliminated on a vacuum rotator evaporator apparatus. The solid was recrystallized in hexane and the yellow solid product was obtained with 72% yield. (m.p. = 104–105°C) (Bio et al., 2004).
The H atoms were placed at calculated idealized positions and refined using a riding model with individual displacement parameters Uiso(H) = 1.2Ueq (Csp2) or 1.5Ueq (methyl and hydroxyl groups).
Data collection: COLLECT (Nonius, 2004); cell
DIRAX/LSQ (Duisenberg, 1992); data reduction: EVALCCD (Duisenberg et al., 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2013); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).C13H22O6 | Z = 1 |
Mr = 274.3 | F(000) = 148 |
Triclinic, P1 | Dx = 1.192 Mg m−3 |
Hall symbol: P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.503 (4) Å | Cell parameters from 3284 reflections |
b = 8.113 (1) Å | θ = 3.1–27.5° |
c = 9.122 (2) Å | µ = 0.09 mm−1 |
α = 99.65 (2)° | T = 293 K |
β = 103.69 (3)° | Prism, colourless |
γ = 98.86 (2)° | 0.14 × 0.11 × 0.08 mm |
V = 382.0 (3) Å3 |
Nonius KappaCCD diffractometer | 2107 reflections with I > 2σ(I) |
Radiation source: Enraf–Nonius FR590 | Rint = 0.043 |
Graphite monochromator | θmax = 25.7°, θmin = 3.1° |
Detector resolution: 9 pixels mm-1 | h = −6→6 |
CCD rotation images, thick slices scans | k = −9→9 |
9589 measured reflections | l = −11→11 |
2758 independent reflections |
Refinement on F2 | H-atom parameters constrained |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0729P)2 + 0.0707P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.046 | (Δ/σ)max < 0.001 |
wR(F2) = 0.130 | Δρmax = 0.21 e Å−3 |
S = 1.04 | Δρmin = −0.24 e Å−3 |
2758 reflections | Extinction correction: SHELXL2013 (Sheldrick, 2013) |
181 parameters | Extinction coefficient: 0.20 (3) |
8 restraints | Absolute structure: Flack x calculated using 872 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons & Flack, 2004). There is insufficient information present to define handedness. |
Hydrogen site location: inferred from neighbouring sites | Absolute structure parameter: −0.2 (5) |
C13H22O6 | γ = 98.86 (2)° |
Mr = 274.3 | V = 382.0 (3) Å3 |
Triclinic, P1 | Z = 1 |
a = 5.503 (4) Å | Mo Kα radiation |
b = 8.113 (1) Å | µ = 0.09 mm−1 |
c = 9.122 (2) Å | T = 293 K |
α = 99.65 (2)° | 0.14 × 0.11 × 0.08 mm |
β = 103.69 (3)° |
Nonius KappaCCD diffractometer | 2107 reflections with I > 2σ(I) |
9589 measured reflections | Rint = 0.043 |
2758 independent reflections |
R[F2 > 2σ(F2)] = 0.046 | H-atom parameters constrained |
wR(F2) = 0.130 | Δρmax = 0.21 e Å−3 |
S = 1.04 | Δρmin = −0.24 e Å−3 |
2758 reflections | Absolute structure: Flack x calculated using 872 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons & Flack, 2004). There is insufficient information present to define handedness. |
181 parameters | Absolute structure parameter: −0.2 (5) |
8 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.2339 (6) | −0.0979 (4) | 0.6028 (5) | 0.0646 (10) | |
O2 | −0.0659 (5) | 0.0519 (3) | 0.6425 (3) | 0.0456 (8) | |
O3 | −0.0994 (5) | 0.3540 (4) | 0.5720 (3) | 0.0434 (7) | |
H3 | −0.2119 | 0.2677 | 0.5383 | 0.065* | |
O4 | 0.3788 (5) | 0.1260 (4) | 0.4944 (3) | 0.0446 (7) | |
O5 | 0.0585 (6) | 0.3883 (5) | 0.2656 (4) | 0.0633 (10) | |
O6 | 0.2663 (8) | 0.3148 (8) | 0.0861 (5) | 0.1016 (17) | |
C1 | 0.3517 (7) | 0.0751 (5) | 0.6312 (5) | 0.0394 (9) | |
H1 | 0.5169 | 0.0992 | 0.7088 | 0.047* | |
C2 | 0.1689 (7) | 0.1724 (5) | 0.6883 (4) | 0.0357 (9) | |
H2 | 0.2256 | 0.2197 | 0.7997 | 0.054* | |
C3 | 0.1409 (6) | 0.3087 (5) | 0.5930 (4) | 0.0327 (9) | |
C4 | 0.1819 (7) | 0.2156 (5) | 0.4429 (5) | 0.0397 (9) | |
H4 | 0.0255 | 0.1324 | 0.3853 | 0.048* | |
C5 | 0.2672 (8) | 0.3188 (6) | 0.3367 (5) | 0.0486 (11) | |
H5 | 0.4124 | 0.411 | 0.3948 | 0.058* | |
C6 | 0.3295 (12) | 0.2203 (10) | 0.2017 (6) | 0.0787 (18) | |
H6A | 0.5092 | 0.2151 | 0.2255 | 0.094* | |
H6B | 0.2282 | 0.1051 | 0.1701 | 0.094* | |
C7 | 0.0949 (10) | 0.4150 (9) | 0.1214 (6) | 0.0727 (17) | |
C71A | 0.222 (7) | 0.598 (3) | 0.144 (3) | 0.149 (7) | 0.74 (6) |
H71A | 0.0946 | 0.6662 | 0.1244 | 0.223* | 0.74 (6) |
H71C | 0.3259 | 0.6077 | 0.0732 | 0.223* | 0.74 (6) |
H71B | 0.3279 | 0.6382 | 0.2478 | 0.223* | 0.74 (6) |
C72A | −0.147 (3) | 0.345 (4) | −0.0032 (17) | 0.116 (6) | 0.74 (6) |
H72A | −0.1074 | 0.3085 | −0.099 | 0.174* | 0.74 (6) |
H72B | −0.2456 | 0.4326 | −0.0132 | 0.174* | 0.74 (6) |
H72C | −0.2427 | 0.2503 | 0.0222 | 0.174* | 0.74 (6) |
C71B | 0.204 (18) | 0.595 (8) | 0.107 (11) | 0.149 (7) | 0.26 (6) |
H71D | 0.1085 | 0.6732 | 0.145 | 0.223* | 0.26 (6) |
H71E | 0.1935 | 0.5954 | 0.0005 | 0.223* | 0.26 (6) |
H71F | 0.3798 | 0.6279 | 0.1663 | 0.223* | 0.26 (6) |
C72B | −0.180 (6) | 0.404 (11) | 0.027 (6) | 0.116 (6) | 0.26 (6) |
H72D | −0.1971 | 0.3568 | −0.0794 | 0.174* | 0.26 (6) |
H72E | −0.2186 | 0.5155 | 0.0375 | 0.174* | 0.26 (6) |
H72F | −0.2952 | 0.3311 | 0.0647 | 0.174* | 0.26 (6) |
C8 | −0.0148 (8) | −0.1149 (6) | 0.6267 (6) | 0.0517 (12) | |
C81 | −0.2032 (11) | −0.2263 (8) | 0.4845 (8) | 0.0820 (17) | |
H81A | −0.1132 | −0.2828 | 0.4198 | 0.123* | |
H81B | −0.3017 | −0.1573 | 0.429 | 0.123* | |
H81C | −0.3152 | −0.31 | 0.5137 | 0.123* | |
C82 | −0.0177 (13) | −0.1798 (8) | 0.7692 (8) | 0.0823 (18) | |
H82A | 0.1478 | −0.2012 | 0.8139 | 0.123* | |
H82C | −0.1428 | −0.2839 | 0.7441 | 0.123* | |
H82B | −0.0598 | −0.0963 | 0.8418 | 0.123* | |
C9 | 0.3413 (8) | 0.4681 (5) | 0.6694 (5) | 0.0454 (10) | |
H9C | 0.3209 | 0.5524 | 0.6076 | 0.068* | |
H9B | 0.5079 | 0.4417 | 0.6796 | 0.068* | |
H9A | 0.3227 | 0.5117 | 0.7699 | 0.068* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0496 (18) | 0.0411 (18) | 0.120 (3) | 0.0181 (14) | 0.0450 (19) | 0.0236 (18) |
O2 | 0.0326 (14) | 0.0361 (15) | 0.079 (2) | 0.0128 (12) | 0.0242 (13) | 0.0242 (14) |
O3 | 0.0304 (14) | 0.0420 (16) | 0.0656 (19) | 0.0149 (12) | 0.0176 (13) | 0.0193 (14) |
O4 | 0.0368 (14) | 0.0536 (17) | 0.0531 (17) | 0.0194 (13) | 0.0218 (12) | 0.0149 (14) |
O5 | 0.066 (2) | 0.102 (3) | 0.0433 (17) | 0.0418 (19) | 0.0250 (15) | 0.0373 (17) |
O6 | 0.079 (3) | 0.203 (5) | 0.059 (2) | 0.070 (3) | 0.039 (2) | 0.056 (3) |
C1 | 0.031 (2) | 0.043 (2) | 0.052 (2) | 0.0133 (17) | 0.0156 (17) | 0.0175 (19) |
C2 | 0.0308 (19) | 0.041 (2) | 0.040 (2) | 0.0105 (16) | 0.0139 (16) | 0.0117 (17) |
C3 | 0.0270 (18) | 0.037 (2) | 0.038 (2) | 0.0114 (16) | 0.0119 (15) | 0.0107 (17) |
C4 | 0.0302 (19) | 0.048 (2) | 0.041 (2) | 0.0087 (17) | 0.0079 (16) | 0.0101 (18) |
C5 | 0.039 (2) | 0.070 (3) | 0.042 (2) | 0.014 (2) | 0.0138 (19) | 0.021 (2) |
C6 | 0.078 (4) | 0.122 (5) | 0.061 (3) | 0.045 (4) | 0.038 (3) | 0.037 (3) |
C7 | 0.055 (3) | 0.132 (5) | 0.045 (3) | 0.030 (3) | 0.019 (2) | 0.037 (3) |
C71A | 0.239 (13) | 0.140 (8) | 0.076 (15) | 0.001 (8) | 0.059 (11) | 0.059 (8) |
C72A | 0.057 (5) | 0.26 (2) | 0.048 (6) | 0.069 (7) | 0.023 (4) | 0.033 (8) |
C71B | 0.239 (13) | 0.140 (8) | 0.076 (15) | 0.001 (8) | 0.059 (11) | 0.059 (8) |
C72B | 0.057 (5) | 0.26 (2) | 0.048 (6) | 0.069 (7) | 0.023 (4) | 0.033 (8) |
C8 | 0.043 (2) | 0.041 (2) | 0.083 (3) | 0.017 (2) | 0.031 (2) | 0.021 (2) |
C81 | 0.066 (4) | 0.056 (3) | 0.115 (5) | 0.002 (3) | 0.025 (3) | 0.005 (3) |
C82 | 0.097 (4) | 0.073 (4) | 0.112 (5) | 0.041 (3) | 0.055 (4) | 0.056 (4) |
C9 | 0.043 (2) | 0.038 (2) | 0.056 (2) | 0.0101 (18) | 0.0146 (18) | 0.0080 (18) |
O1—C1 | 1.405 (5) | C7—C71B | 1.53 (3) |
O1—C8 | 1.426 (5) | C7—C72B | 1.53 (2) |
O2—C8 | 1.415 (5) | C71A—H71A | 0.96 |
O2—C2 | 1.421 (5) | C71A—H71C | 0.96 |
O3—C3 | 1.405 (4) | C71A—H71B | 0.96 |
O3—H3 | 0.82 | C72A—H72A | 0.96 |
O4—C1 | 1.412 (5) | C72A—H72B | 0.96 |
O4—C4 | 1.428 (5) | C72A—H72C | 0.96 |
O5—C7 | 1.422 (6) | C71B—H71D | 0.96 |
O5—C5 | 1.423 (5) | C71B—H71E | 0.96 |
O6—C7 | 1.395 (8) | C71B—H71F | 0.96 |
O6—C6 | 1.415 (8) | C72B—H72D | 0.96 |
C1—C2 | 1.504 (5) | C72B—H72E | 0.96 |
C1—H1 | 0.98 | C72B—H72F | 0.96 |
C2—C3 | 1.521 (5) | C8—C82 | 1.485 (8) |
C2—H2 | 0.98 | C8—C81 | 1.503 (8) |
C3—C9 | 1.506 (6) | C81—H81A | 0.96 |
C3—C4 | 1.532 (6) | C81—H81B | 0.96 |
C4—C5 | 1.493 (5) | C81—H81C | 0.96 |
C4—H4 | 0.98 | C82—H82A | 0.96 |
C5—C6 | 1.492 (7) | C82—H82C | 0.96 |
C5—H5 | 0.98 | C82—H82B | 0.96 |
C6—H6A | 0.97 | C9—H9C | 0.96 |
C6—H6B | 0.97 | C9—H9B | 0.96 |
C7—C72A | 1.489 (12) | C9—H9A | 0.96 |
C7—C71A | 1.502 (16) | ||
C1—O1—C8 | 110.7 (3) | O5—C7—C72B | 102 (2) |
C8—O2—C2 | 109.1 (3) | C71B—C7—C72B | 97 (2) |
C3—O3—H3 | 109.5 | C7—C71A—H71A | 109.5 |
C1—O4—C4 | 109.0 (3) | C7—C71A—H71C | 109.5 |
C7—O5—C5 | 106.9 (4) | H71A—C71A—H71C | 109.5 |
C7—O6—C6 | 109.5 (4) | C7—C71A—H71B | 109.5 |
O1—C1—O4 | 111.8 (4) | H71A—C71A—H71B | 109.5 |
O1—C1—C2 | 105.2 (3) | H71C—C71A—H71B | 109.5 |
O4—C1—C2 | 106.8 (3) | C7—C72A—H72A | 109.5 |
O1—C1—H1 | 110.9 | C7—C72A—H72B | 109.5 |
O4—C1—H1 | 110.9 | H72A—C72A—H72B | 109.5 |
C2—C1—H1 | 110.9 | C7—C72A—H72C | 109.5 |
O2—C2—C1 | 104.0 (3) | H72A—C72A—H72C | 109.5 |
O2—C2—C3 | 108.0 (3) | H72B—C72A—H72C | 109.5 |
C1—C2—C3 | 105.1 (3) | C7—C71B—H71D | 109.5 |
O2—C2—H2 | 113 | C7—C71B—H71E | 109.5 |
C1—C2—H2 | 113 | H71D—C71B—H71E | 109.5 |
C3—C2—H2 | 113 | C7—C71B—H71F | 109.5 |
O3—C3—C9 | 107.8 (3) | H71D—C71B—H71F | 109.5 |
O3—C3—C2 | 112.6 (3) | H71E—C71B—H71F | 109.5 |
C9—C3—C2 | 110.7 (3) | C7—C72B—H72D | 109.5 |
O3—C3—C4 | 112.9 (3) | C7—C72B—H72E | 109.5 |
C9—C3—C4 | 112.8 (3) | H72D—C72B—H72E | 109.5 |
C2—C3—C4 | 100.0 (3) | C7—C72B—H72F | 109.5 |
O4—C4—C5 | 107.2 (3) | H72D—C72B—H72F | 109.5 |
O4—C4—C3 | 103.8 (3) | H72E—C72B—H72F | 109.5 |
C5—C4—C3 | 118.7 (3) | O2—C8—O1 | 105.1 (3) |
O4—C4—H4 | 108.9 | O2—C8—C82 | 110.5 (4) |
C5—C4—H4 | 108.9 | O1—C8—C82 | 110.4 (4) |
C3—C4—H4 | 108.9 | O2—C8—C81 | 108.5 (4) |
O5—C5—C6 | 102.8 (4) | O1—C8—C81 | 108.6 (4) |
O5—C5—C4 | 108.1 (3) | C82—C8—C81 | 113.3 (5) |
C6—C5—C4 | 115.4 (4) | C8—C81—H81A | 109.5 |
O5—C5—H5 | 110.1 | C8—C81—H81B | 109.5 |
C6—C5—H5 | 110.1 | H81A—C81—H81B | 109.5 |
C4—C5—H5 | 110.1 | C8—C81—H81C | 109.5 |
O6—C6—C5 | 103.3 (5) | H81A—C81—H81C | 109.5 |
O6—C6—H6A | 111.1 | H81B—C81—H81C | 109.5 |
C5—C6—H6A | 111.1 | C8—C82—H82A | 109.5 |
O6—C6—H6B | 111.1 | C8—C82—H82C | 109.5 |
C5—C6—H6B | 111.1 | H82A—C82—H82C | 109.5 |
H6A—C6—H6B | 109.1 | C8—C82—H82B | 109.5 |
O6—C7—O5 | 106.7 (4) | H82A—C82—H82B | 109.5 |
O6—C7—C72A | 105.2 (14) | H82C—C82—H82B | 109.5 |
O5—C7—C72A | 110.0 (8) | C3—C9—H9C | 109.5 |
O6—C7—C71A | 107.4 (16) | C3—C9—H9B | 109.5 |
O5—C7—C71A | 107.9 (12) | H9C—C9—H9B | 109.5 |
C72A—C7—C71A | 118.9 (19) | C3—C9—H9A | 109.5 |
O6—C7—C71B | 106 (5) | H9C—C9—H9A | 109.5 |
O5—C7—C71B | 119 (4) | H9B—C9—H9A | 109.5 |
O6—C7—C72B | 127 (3) | ||
C8—O1—C1—O4 | −111.3 (4) | C7—O5—C5—C4 | −153.6 (4) |
C8—O1—C1—C2 | 4.3 (5) | O4—C4—C5—O5 | 171.2 (4) |
C4—O4—C1—O1 | 100.8 (3) | C3—C4—C5—O5 | −71.9 (4) |
C4—O4—C1—C2 | −13.8 (4) | O4—C4—C5—C6 | 56.8 (5) |
C8—O2—C2—C1 | 24.8 (4) | C3—C4—C5—C6 | 173.7 (4) |
C8—O2—C2—C3 | 136.1 (3) | C7—O6—C6—C5 | −21.4 (7) |
O1—C1—C2—O2 | −17.4 (4) | O5—C5—C6—O6 | 31.7 (6) |
O4—C1—C2—O2 | 101.6 (3) | C4—C5—C6—O6 | 149.1 (4) |
O1—C1—C2—C3 | −130.8 (3) | C6—O6—C7—O5 | 2.5 (7) |
O4—C1—C2—C3 | −11.8 (4) | C6—O6—C7—C72A | −114.4 (10) |
O2—C2—C3—O3 | 39.9 (4) | C6—O6—C7—C71A | 118.0 (13) |
C1—C2—C3—O3 | 150.4 (3) | C6—O6—C7—C71B | 130 (3) |
O2—C2—C3—C9 | 160.6 (3) | C6—O6—C7—C72B | −117 (3) |
C1—C2—C3—C9 | −88.8 (4) | C5—O5—C7—O6 | 18.7 (6) |
O2—C2—C3—C4 | −80.2 (3) | C5—O5—C7—C72A | 132.4 (15) |
C1—C2—C3—C4 | 30.3 (4) | C5—O5—C7—C71A | −96.4 (17) |
C1—O4—C4—C5 | 160.1 (3) | C5—O5—C7—C71B | −101 (5) |
C1—O4—C4—C3 | 33.7 (4) | C5—O5—C7—C72B | 154 (3) |
O3—C3—C4—O4 | −158.5 (3) | C2—O2—C8—O1 | −22.4 (5) |
C9—C3—C4—O4 | 78.9 (4) | C2—O2—C8—C82 | 96.6 (5) |
C2—C3—C4—O4 | −38.6 (3) | C2—O2—C8—C81 | −138.5 (4) |
O3—C3—C4—C5 | 82.7 (4) | C1—O1—C8—O2 | 10.6 (5) |
C9—C3—C4—C5 | −39.8 (4) | C1—O1—C8—C82 | −108.5 (5) |
C2—C3—C4—C5 | −157.4 (3) | C1—O1—C8—C81 | 126.6 (4) |
C7—O5—C5—C6 | −31.1 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O4i | 0.82 | 2.28 | 3.022 (4) | 152 |
C1—H1···O2ii | 0.98 | 2.58 | 3.218 (5) | 123 |
C2—H2···O6iii | 0.98 | 2.54 | 3.504 (5) | 167 |
Symmetry codes: (i) x−1, y, z; (ii) x+1, y, z; (iii) x, y, z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O4i | 0.82 | 2.28 | 3.022 (4) | 151.6 |
C1—H1···O2ii | 0.98 | 2.58 | 3.218 (5) | 123.1 |
C2—H2···O6iii | 0.98 | 2.54 | 3.504 (5) | 166.8 |
Symmetry codes: (i) x−1, y, z; (ii) x+1, y, z; (iii) x, y, z+1. |
Acknowledgements
This work was supported by the Brazilian agencies FAPERJ, CAPES and CNPq, and by the X-ray diffraction laboratory LDRX-UFF for the data collection.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The structural modification of carbohydrates has been extensively explored for improvement of their pharmacology properties (Bio et al., 2004; Canuto et al. (2007); Mane et al. 2008; Yoneda et al. 2011). As ongoing research in developing potentially new drugs, we report here the structure of 1,2:5,6-Di-O-isopropylidene-3-C-methyl-α-D-allofuranose.
In the title molecule (Fig. 1), the torsion angle formed by atoms O4, C1, C2, O2 is 101.6 (3)° and that formed by O1, C1, C2, C3, is -130.8 (3)°.
The structure exhibits disorder in a isopropylidene group (atoms C71A, C72A, C71B and C72B) over two positions. Rings A (O1,C1,C2,O2,C8) and B (C1,C2,C3,C4,O4) adopt a twisted conformation, with ring-puckering parameters q2 = 0.223 (5) Å, ϕ2 = 277 (1)°; q2 = 0.376 (5) Å, ϕ2 = 89.8 (6)°, respectively. Ring C (O5,C5,C6,O6,C7) also shows a twist conformation, with ring-puckering parameters q2 = 0.404 (3) Å, ϕ2 = 196.021 (1)° (Cremer & Pople, 1975).
In the crystal packing, molecules are linked by O—H···O hydrogen bonds into chains with graph-set notation C(5) along [100] (Bernstein et al., 1995). There are also short C—H···O interactions that form a C(7) chain motif along [001] direction (Fig. 2).