metal-organic compounds
Hexakis(dimethyl sulfoxide-κO)zinc(II) polyiodide
aDepartamento de Química, Universidad Nacional de Colombia, Ciudad Universitaria, Bogotá Kr 30 No 45-03, Colombia, and bDepartment of Chemistry, Purdue University, W. Lafayette, IN 47907, USA
*Correspondence e-mail: aduarter@unal.edu.co
The title compound, [Zn{(CH3)2SO}6]I4, is a one-dimensional supramolecular polymer along a threefold rotation axis of the It is built up from discrete [Zn{(CH3)2SO}6]2+ units connected through non-classical hydrogen bonds to linear I42− polyiodide anions (C—H⋯I = 3.168 Å). The ZnII ion in the cation has an octahedral coordination geometry, with all six Zn—O bond lengths being equivalent, at 2.111 (4) Å. The linear polyiodide anion contains a neutral I2 molecule weakly coordinated to two iodide ions.
CCDC reference: 966631
Related literature
For related structures, see Garzón-Tovar et al. (2013); Long et al. (1999); Tkachev et al. (1994). For supramolecular polymers formed by non-classical hydrogen bonds, see: Fromm (2001); Huang & Scherman (2012); Youm et al. (2006). For polyiodide compounds, see: Svensson & Kloo (2003).
Experimental
Crystal data
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Data collection: COLLECT (Nonius, 1998); cell DENZO/SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).
Supporting information
CCDC reference: 966631
10.1107/S1600536813028377/fj2643sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813028377/fj2643Isup2.hkl
Zinc (II) chloride (1.1404 g, 8.3659 mmol) was added to a DMSO (16.506 g, 211.26 mmol) and distilled water (0.199 g, 11.1 mmol) solution. After colorless mixture was ultrasonicated for 20 min, CH3I (3.420 g, 24.09 mmol) was added, and ultrasonication was continued for an additional 20 min. The resulting yellow solution was kept at 20°C for 8 d, with continuous agitation. The mixture was filtered, and the filtrate was refrigerated at 4°C for 30 d, after which blue crystals with a metallic luster formed. The crystals of [Zn{(CH3)2SO}6]I4 were filtered and dried under vacuum. The yield obtained was 0.3231 g.
Data collection: COLLECT (Nonius, 1998); cell
DENZO/SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO/SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).[Zn(C2H6OS)6]I4 | Dx = 2.169 Mg m−3 |
Mr = 1041.79 | Mo Kα radiation, λ = 0.71073 Å |
Trigonal, R3 | Cell parameters from 3127 reflections |
Hall symbol: -R 3 | θ = 3–30° |
a = 11.8399 (7) Å | µ = 5.06 mm−1 |
c = 19.7110 (12) Å | T = 298 K |
V = 2393.0 (2) Å3 | Plate, 1orange |
Z = 3 | 0.60 × 0.40 × 0.40 mm |
F(000) = 1482 |
Nonius KappaCCD diffractometer | 1251 reflections with > 2.0σ(I) |
Graphite 002 monochromator | Rint = 0.036 |
ω scans | θmax = 30.0°, θmin = 2.9° |
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997) | h = 0→16 |
Tmin = 0.126, Tmax = 0.132 | k = −14→0 |
3127 measured reflections | l = −27→27 |
1512 independent reflections |
Refinement on F2 | H-atom parameters constrained |
Least-squares matrix: full | 1/[σ2(Fo2) + (0.P)2 + 55.1589P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.047 | (Δ/σ)max < 0.001 |
wR(F2) = 0.104 | Δρmax = 1.00 e Å−3 |
S = 1.17 | Δρmin = −1.23 e Å−3 |
1512 reflections | Extinction correction: SHELXL97 (Sheldrick, 2008) |
48 parameters | Extinction coefficient: 0.30E-02 |
0 restraints |
[Zn(C2H6OS)6]I4 | Z = 3 |
Mr = 1041.79 | Mo Kα radiation |
Trigonal, R3 | µ = 5.06 mm−1 |
a = 11.8399 (7) Å | T = 298 K |
c = 19.7110 (12) Å | 0.60 × 0.40 × 0.40 mm |
V = 2393.0 (2) Å3 |
Nonius KappaCCD diffractometer | 1512 independent reflections |
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997) | 1251 reflections with > 2.0σ(I) |
Tmin = 0.126, Tmax = 0.132 | Rint = 0.036 |
3127 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 1.17 | 1/[σ2(Fo2) + (0.P)2 + 55.1589P] where P = (Fo2 + 2Fc2)/3 |
1512 reflections | Δρmax = 1.00 e Å−3 |
48 parameters | Δρmin = −1.23 e Å−3 |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Outlier data were removed using a local program based on the method of Prince and Nicholson. Refinement on F2 for ALL reflections except for 0 with very negative F2 or flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating R_factor_obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
I1 | 0.6667 | 0.3333 | 0.59206 (4) | 0.0430 (3) | |
I2 | 0.0000 | 0.0000 | 0.42791 (5) | 0.0466 (3) | |
Zn1 | 0.6667 | 0.3333 | 0.3333 | 0.0258 (3) | |
S1 | 0.62508 (13) | 0.54407 (13) | 0.40794 (8) | 0.0316 (3) | |
O1 | 0.7243 (4) | 0.5025 (4) | 0.3922 (2) | 0.0324 (9) | |
C1 | 0.6592 (7) | 0.6747 (6) | 0.3515 (4) | 0.0423 (15) | |
C2 | 0.6825 (8) | 0.6355 (7) | 0.4845 (3) | 0.0478 (16) | |
H1A | 0.7491 | 0.7411 | 0.3559 | 0.063* | |
H1B | 0.6045 | 0.7105 | 0.3625 | 0.063* | |
H1C | 0.6425 | 0.6428 | 0.3057 | 0.063* | |
H2A | 0.6836 | 0.5804 | 0.5199 | 0.072* | |
H2B | 0.6256 | 0.6680 | 0.4972 | 0.072* | |
H2C | 0.7691 | 0.7074 | 0.4776 | 0.072* |
U11 | U22 | U33 | U12 | U13 | U23 | |
I1 | 0.0445 (3) | 0.0445 (3) | 0.0400 (4) | 0.02223 (15) | 0.0000 | 0.0000 |
I2 | 0.0356 (3) | 0.0356 (3) | 0.0688 (6) | 0.01778 (14) | 0.0000 | 0.0000 |
Zn1 | 0.0221 (4) | 0.0221 (4) | 0.0331 (8) | 0.0111 (2) | 0.0000 | 0.0000 |
S1 | 0.0264 (6) | 0.0250 (6) | 0.0409 (8) | 0.0110 (5) | 0.0057 (5) | −0.0013 (5) |
O1 | 0.033 (2) | 0.0274 (18) | 0.040 (2) | 0.0174 (16) | 0.0017 (17) | −0.0037 (16) |
C1 | 0.049 (4) | 0.038 (3) | 0.049 (4) | 0.028 (3) | 0.005 (3) | 0.008 (3) |
C2 | 0.066 (5) | 0.044 (4) | 0.037 (3) | 0.030 (4) | 0.003 (3) | −0.009 (3) |
I2—I2i | 2.8417 (18) | S1—C1 | 1.780 (6) |
Zn1—O1ii | 2.111 (4) | S1—C2 | 1.782 (7) |
Zn1—O1iii | 2.111 (4) | C1—H1A | 0.9600 |
Zn1—O1iv | 2.111 (4) | C1—H1B | 0.9600 |
Zn1—O1 | 2.111 (4) | C1—H1C | 0.9600 |
Zn1—O1v | 2.111 (4) | C2—H2A | 0.9600 |
Zn1—O1vi | 2.111 (4) | C2—H2B | 0.9600 |
S1—O1 | 1.515 (4) | C2—H2C | 0.9600 |
O1ii—Zn1—O1iii | 179.9980 (10) | O1—S1—C2 | 104.4 (3) |
O1ii—Zn1—O1iv | 87.29 (16) | C1—S1—C2 | 98.6 (3) |
O1iii—Zn1—O1iv | 92.71 (16) | S1—O1—Zn1 | 119.0 (2) |
O1ii—Zn1—O1 | 87.29 (16) | S1—C1—H1A | 109.50 |
O1iii—Zn1—O1 | 92.71 (16) | S1—C1—H1B | 109.50 |
O1iv—Zn1—O1 | 92.71 (16) | H1A—C1—H1B | 109.50 |
O1ii—Zn1—O1v | 92.71 (16) | S1—C1—H1C | 109.50 |
O1iii—Zn1—O1v | 87.29 (16) | H1A—C1—H1C | 109.50 |
O1iv—Zn1—O1v | 179.9980 (10) | H1B—C1—H1C | 109.50 |
O1—Zn1—O1v | 87.29 (16) | S1—C2—H2A | 109.50 |
O1ii—Zn1—O1vi | 92.71 (16) | S1—C2—H2B | 109.50 |
O1iii—Zn1—O1vi | 87.29 (16) | H2A—C2—H2B | 109.50 |
O1iv—Zn1—O1vi | 87.29 (16) | S1—C2—H2C | 109.50 |
O1—Zn1—O1vi | 180.00 | H2A—C2—H2C | 109.50 |
O1v—Zn1—O1vi | 92.71 (15) | H2B—C2—H2C | 109.50 |
O1—S1—C1 | 106.1 (3) | ||
C1—S1—O1—Zn1 | −101.8 (3) | O1iv—Zn1—O1—S1 | −48.4 (3) |
C2—S1—O1—Zn1 | 154.6 (3) | O1v—Zn1—O1—S1 | 131.6 (3) |
O1ii—Zn1—O1—S1 | 38.74 (19) | O1vi—Zn1—O1—S1 | 112 (10) |
O1iii—Zn1—O1—S1 | −141.26 (19) |
Symmetry codes: (i) −x, −y, −z+1; (ii) x−y+1/3, x−1/3, −z+2/3; (iii) −x+y+1, −x+1, z; (iv) −y+1, x−y, z; (v) y+1/3, −x+y+2/3, −z+2/3; (vi) −x+4/3, −y+2/3, −z+2/3. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C2H6OS)6]I4 |
Mr | 1041.79 |
Crystal system, space group | Trigonal, R3 |
Temperature (K) | 298 |
a, c (Å) | 11.8399 (7), 19.7110 (12) |
V (Å3) | 2393.0 (2) |
Z | 3 |
Radiation type | Mo Kα |
µ (mm−1) | 5.06 |
Crystal size (mm) | 0.60 × 0.40 × 0.40 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | Multi-scan (SCALEPACK; Otwinowski & Minor, 1997) |
Tmin, Tmax | 0.126, 0.132 |
No. of measured, independent and observed [ > 2.0σ(I)] reflections | 3127, 1512, 1251 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.104, 1.17 |
No. of reflections | 1512 |
No. of parameters | 48 |
H-atom treatment | H-atom parameters constrained |
1/[σ2(Fo2) + (0.P)2 + 55.1589P] where P = (Fo2 + 2Fc2)/3 | |
Δρmax, Δρmin (e Å−3) | 1.00, −1.23 |
Computer programs: COLLECT (Nonius, 1998), DENZO/SCALEPACK (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 2008), Mercury (Macrae et al., 2008), SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).
Acknowledgements
We would like to acknowledge the financial support given by the Universidad Nacional de Colombia, Bogotá.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Supramolecular polymers are defined as polymeric systems that extend beyond the molecule by a process of self-assembly between monomer units directed by noncovalent interactions (Huang & Scherman, 2012). These noncovalent forces, such as hydrogen bonding, coordination bonds, π–π stacking and electrostatic forces act as driving forces to construct a well defined supramolecular architectures (Fromm, 2001); however, there are a few examples where non-classical hydrogen bonds such as C—H···I are used to construct these structures (Youm et al., 2006). Previous studies have suggested that a coordination complex with DMSO such as [Cu(DMSO)6]2+ acts as monomeric units connected through a self-assembly process with tetraiodide ions driven by weak non-classical hydrogen bonds C—H···I to form a one-dimensional supramolecular polymer (Garzón-Tovar et al., 2013). Herein we report the synthesis and structural characterization of a new supramolecular polymer.
In the title compound, [Zn{(CH3)2SO}6]I4, the Zn(II) ion is located on a 3-fold inversion axis being coordinated by six equidistant oxygen-bonded dimethyl sulfoxide ligands (Fig. 1). The Zn—O bond distances in the [Zn(DMSO)6]2+ complex are 2.111 (4) Å and 87.28 (16), 92.71 (16) ° bond angles. The linear tetraiodide chain presents a neutral I—I molecule with bond distance of 2.8417 (18) Å, weakly coordinated with two iodide (I-) anions (bond distance 3.335 (1) Å). This result is in agreement with other studies, where the I42- correspond to interaction of two I- anions with one I2 molecule (Iδ-(I—I)Iδ-) (Long et al.,1999). The two end-iodide anions build up three weak hydrogen bonds to the hydrogen atoms of the methyl groups with distances of 3.167 Å (Fig. 2) to form a one-dimensional supramolecular polymer.