organic compounds
6-Hydroxy-5-[(2-hydroxy-4,4-dimethyl-6-oxocyclohex-1-enyl)(4-nitrophenyl)methyl]-1,3-dimethylpyrimidine-2,4(1H,3H)-dione
aDepartment of Chemistry, Annamalai University, Annamalai Nagar 608 002, Tamil Nadu, India
*Correspondence e-mail: saisukanyashri@gmail.com
In the title compound, C21H23N3O7, the pyrimidinedione ring adopts a screw-boat conformation, whereas the cyclohexenone ring adopts an with the C atom bearing the methyl groups as the flap atom. The dihedral angle between the mean planes of the pyrimidinedione and cyclohexenone rings is 58.78 (2)°. The pyrimidinedione and cyclohexenone rings form dihedral angles of 59.94 (3) and 54.73 (2)°, respectively, with the 4-nitrophenyl ring. Relatively strong intramolecular O—H⋯O hydrogen bonds are observed. In the crystal, molecules are linked by C—H⋯O hydrogen bonds, forming a chain along the c-axis direction.
CCDC reference: 937357
Related literature
For related syntheses, see: Horning & Horning (1946); Kaupp et al. (2003). For biological and pharmaceutical properties of pyrimidine derivatives, see: Ibrahim & El-Metwally (2010); Kappe (1993); Campbell et al. (1988); Elinson et al. (2006); Sun et al. (2006). For bond-length data, see: Allen et al. (1987). For the of a related bisdimedone derivative, see: Sughanya & Sureshbabu (2012). For the assignment of ring conformations, see: Cremer & Pople (1975).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97.
Supporting information
CCDC reference: 937357
10.1107/S1600536813028584/is5316sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813028584/is5316Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813028584/is5316Isup3.cml
The title compound was prepared in a single stage (Horning & Horning, 1946; Kaupp et al., 2003). A mixture of 4-nitrobenzaldehyde (1.51 g, 10 mmol), 5,5-dimethylcyclohexane-1,3-dione (1.40 g, 8 mmol), 1,3-dimethyl-2,4,6(1H,3H,5H)pyrimidinetrione (1.56 g, 10 mmol) and 20 ml of ethanol was heated to 70 °C for about 10 minutes. The reaction mixture was allowed to cool to room temperature and the resulting title compound was filtered and dried. The yellow crystal used for data collection was obtained by crystallization from ethanol at room temperature,(m.p. 446 K; yield 3.69 g, 86%).
All hydrogen atoms were identified from difference in electron density peaks and subsequently treated as riding atoms with d(Csp2—H) = 0.93 Å, d(Cmethyl—H) = 0.96 Å, d(Cmethylene—H) = 0.97 Å, d(Cmethine—H) = 0.98 Å, d(O—H) = 0.82 Å, and Uiso(H) = xUeq(C,O), where x = 1.5 for methyl H and 1.2 for all other H atoms.
Data collection: APEX2 (Bruker, 2004); cell
APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C21H23N3O7 | F(000) = 904 |
Mr = 429.42 | Dx = 1.373 Mg m−3 |
Monoclinic, P21/c | Melting point: 446 K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 12.7470 (2) Å | Cell parameters from 6971 reflections |
b = 14.0577 (3) Å | θ = 2.3–31.1° |
c = 11.7639 (2) Å | µ = 0.10 mm−1 |
β = 99.752 (1)° | T = 296 K |
V = 2077.55 (7) Å3 | Block, yellow |
Z = 4 | 0.30 × 0.20 × 0.20 mm |
Bruker Kappa APEXII CCD diffractometer | 3655 independent reflections |
Radiation source: fine-focus sealed tube | 2930 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ω and ϕ scan | θmax = 25.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −15→15 |
Tmin = 0.953, Tmax = 0.996 | k = −16→16 |
19038 measured reflections | l = −13→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.111 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0532P)2 + 0.7319P] where P = (Fo2 + 2Fc2)/3 |
3655 reflections | (Δ/σ)max < 0.001 |
284 parameters | Δρmax = 0.20 e Å−3 |
0 restraints | Δρmin = −0.17 e Å−3 |
C21H23N3O7 | V = 2077.55 (7) Å3 |
Mr = 429.42 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.7470 (2) Å | µ = 0.10 mm−1 |
b = 14.0577 (3) Å | T = 296 K |
c = 11.7639 (2) Å | 0.30 × 0.20 × 0.20 mm |
β = 99.752 (1)° |
Bruker Kappa APEXII CCD diffractometer | 3655 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 2930 reflections with I > 2σ(I) |
Tmin = 0.953, Tmax = 0.996 | Rint = 0.026 |
19038 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.111 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.20 e Å−3 |
3655 reflections | Δρmin = −0.17 e Å−3 |
284 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.43994 (13) | 0.52617 (14) | 0.32945 (15) | 0.0463 (4) | |
C3 | 0.31661 (13) | 0.58663 (12) | 0.44572 (15) | 0.0405 (4) | |
C4 | 0.28899 (12) | 0.49692 (12) | 0.47480 (14) | 0.0379 (4) | |
C5 | 0.34740 (13) | 0.41934 (12) | 0.44258 (14) | 0.0393 (4) | |
C7 | 0.47199 (16) | 0.35565 (15) | 0.32496 (18) | 0.0574 (5) | |
H7A | 0.4211 | 0.3198 | 0.2725 | 0.086* | |
H7B | 0.5024 | 0.3158 | 0.3883 | 0.086* | |
H7C | 0.5273 | 0.3781 | 0.2855 | 0.086* | |
C8 | 0.41348 (18) | 0.69691 (15) | 0.3370 (2) | 0.0674 (6) | |
H8A | 0.4819 | 0.6971 | 0.3132 | 0.101* | |
H8B | 0.4142 | 0.7405 | 0.4000 | 0.101* | |
H8C | 0.3600 | 0.7161 | 0.2736 | 0.101* | |
C9 | 0.19863 (12) | 0.48072 (12) | 0.54145 (14) | 0.0367 (4) | |
H9 | 0.1586 | 0.5406 | 0.5336 | 0.044* | |
C10 | 0.23508 (12) | 0.46936 (12) | 0.67044 (14) | 0.0372 (4) | |
C11 | 0.25023 (13) | 0.55493 (12) | 0.73689 (15) | 0.0400 (4) | |
C12 | 0.28119 (16) | 0.55040 (13) | 0.86545 (16) | 0.0503 (5) | |
H12A | 0.2477 | 0.6030 | 0.8990 | 0.060* | |
H12B | 0.3576 | 0.5589 | 0.8853 | 0.060* | |
C13 | 0.25105 (16) | 0.45824 (14) | 0.91944 (16) | 0.0518 (5) | |
C14 | 0.29180 (17) | 0.37709 (14) | 0.85299 (16) | 0.0541 (5) | |
H14A | 0.3685 | 0.3730 | 0.8756 | 0.065* | |
H14B | 0.2617 | 0.3180 | 0.8753 | 0.065* | |
C15 | 0.26648 (13) | 0.38623 (12) | 0.72543 (15) | 0.0419 (4) | |
C16 | 0.3044 (2) | 0.45346 (18) | 1.04585 (18) | 0.0775 (7) | |
H16A | 0.3802 | 0.4564 | 1.0507 | 0.116* | |
H16B | 0.2854 | 0.3949 | 1.0791 | 0.116* | |
H16C | 0.2809 | 0.5061 | 1.0871 | 0.116* | |
C17 | 0.13041 (19) | 0.45314 (18) | 0.9135 (2) | 0.0700 (6) | |
H17A | 0.1071 | 0.5066 | 0.9533 | 0.105* | |
H17B | 0.1123 | 0.3953 | 0.9490 | 0.105* | |
H17C | 0.0961 | 0.4543 | 0.8343 | 0.105* | |
C18 | 0.11860 (12) | 0.40589 (12) | 0.48585 (14) | 0.0368 (4) | |
C19 | 0.05242 (13) | 0.35990 (13) | 0.54975 (14) | 0.0419 (4) | |
H19 | 0.0575 | 0.3744 | 0.6276 | 0.050* | |
C20 | −0.02105 (13) | 0.29298 (13) | 0.50096 (14) | 0.0410 (4) | |
H20 | −0.0648 | 0.2624 | 0.5452 | 0.049* | |
C21 | −0.02800 (12) | 0.27259 (12) | 0.38590 (14) | 0.0391 (4) | |
C22 | 0.03304 (15) | 0.31929 (15) | 0.31838 (15) | 0.0527 (5) | |
H22 | 0.0258 | 0.3061 | 0.2400 | 0.063* | |
C23 | 0.10532 (15) | 0.38612 (15) | 0.36873 (15) | 0.0514 (5) | |
H23 | 0.1462 | 0.4188 | 0.3231 | 0.062* | |
N1 | −0.10298 (12) | 0.19886 (11) | 0.33551 (13) | 0.0476 (4) | |
N2 | 0.41894 (11) | 0.43692 (11) | 0.36855 (13) | 0.0441 (4) | |
N3 | 0.38954 (11) | 0.60059 (11) | 0.37410 (13) | 0.0464 (4) | |
O1 | 0.50086 (11) | 0.53864 (11) | 0.26191 (12) | 0.0635 (4) | |
O2 | 0.27934 (10) | 0.66554 (8) | 0.48297 (11) | 0.0500 (3) | |
H2 | 0.2621 | 0.6561 | 0.5461 | 0.075* | |
O3 | 0.33804 (10) | 0.33569 (9) | 0.47517 (11) | 0.0483 (3) | |
O4 | 0.24328 (10) | 0.63529 (9) | 0.69037 (11) | 0.0494 (3) | |
O5 | 0.27781 (11) | 0.30563 (9) | 0.67125 (11) | 0.0527 (3) | |
H5 | 0.2868 | 0.3171 | 0.6052 | 0.079* | |
O6 | −0.16084 (13) | 0.16313 (11) | 0.39533 (12) | 0.0695 (4) | |
O7 | −0.10407 (13) | 0.17628 (13) | 0.23596 (13) | 0.0773 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0342 (9) | 0.0604 (12) | 0.0431 (10) | −0.0059 (8) | 0.0029 (8) | 0.0007 (9) |
C3 | 0.0339 (8) | 0.0411 (10) | 0.0448 (9) | 0.0020 (7) | 0.0013 (7) | 0.0043 (8) |
C4 | 0.0329 (8) | 0.0388 (9) | 0.0410 (9) | −0.0012 (7) | 0.0038 (7) | 0.0008 (7) |
C5 | 0.0344 (8) | 0.0411 (10) | 0.0408 (9) | −0.0026 (7) | 0.0022 (7) | −0.0040 (8) |
C7 | 0.0478 (11) | 0.0640 (13) | 0.0630 (12) | 0.0038 (9) | 0.0168 (9) | −0.0149 (10) |
C8 | 0.0674 (14) | 0.0561 (13) | 0.0821 (15) | −0.0027 (11) | 0.0222 (12) | 0.0254 (11) |
C9 | 0.0333 (8) | 0.0342 (8) | 0.0422 (9) | 0.0034 (7) | 0.0047 (7) | 0.0004 (7) |
C10 | 0.0318 (8) | 0.0374 (9) | 0.0418 (9) | 0.0005 (7) | 0.0044 (7) | −0.0016 (7) |
C11 | 0.0331 (8) | 0.0383 (10) | 0.0477 (10) | 0.0015 (7) | 0.0044 (7) | −0.0010 (8) |
C12 | 0.0535 (11) | 0.0468 (11) | 0.0480 (10) | −0.0034 (9) | 0.0015 (9) | −0.0074 (8) |
C13 | 0.0624 (12) | 0.0499 (11) | 0.0417 (10) | −0.0017 (9) | 0.0050 (9) | −0.0013 (8) |
C14 | 0.0667 (12) | 0.0450 (11) | 0.0481 (11) | 0.0050 (9) | 0.0024 (9) | 0.0051 (9) |
C15 | 0.0404 (9) | 0.0384 (10) | 0.0460 (10) | 0.0021 (7) | 0.0044 (7) | −0.0012 (8) |
C16 | 0.109 (2) | 0.0723 (16) | 0.0466 (12) | 0.0021 (14) | −0.0003 (12) | −0.0014 (11) |
C17 | 0.0708 (14) | 0.0786 (16) | 0.0646 (14) | −0.0145 (12) | 0.0228 (11) | −0.0096 (12) |
C18 | 0.0305 (8) | 0.0409 (9) | 0.0383 (9) | 0.0023 (7) | 0.0036 (7) | 0.0014 (7) |
C19 | 0.0383 (9) | 0.0539 (11) | 0.0343 (8) | −0.0025 (8) | 0.0085 (7) | −0.0039 (8) |
C20 | 0.0361 (9) | 0.0491 (10) | 0.0391 (9) | −0.0044 (7) | 0.0097 (7) | 0.0024 (8) |
C21 | 0.0322 (8) | 0.0447 (10) | 0.0398 (9) | −0.0003 (7) | 0.0045 (7) | −0.0011 (7) |
C22 | 0.0469 (10) | 0.0786 (14) | 0.0331 (9) | −0.0154 (10) | 0.0080 (8) | −0.0053 (9) |
C23 | 0.0448 (10) | 0.0719 (13) | 0.0382 (10) | −0.0171 (9) | 0.0090 (8) | 0.0042 (9) |
N1 | 0.0424 (8) | 0.0535 (9) | 0.0461 (9) | −0.0038 (7) | 0.0055 (7) | −0.0050 (7) |
N2 | 0.0367 (8) | 0.0493 (9) | 0.0472 (8) | −0.0011 (6) | 0.0099 (6) | −0.0063 (7) |
N3 | 0.0399 (8) | 0.0475 (9) | 0.0522 (9) | −0.0033 (7) | 0.0092 (7) | 0.0095 (7) |
O1 | 0.0520 (8) | 0.0836 (11) | 0.0597 (8) | −0.0101 (7) | 0.0235 (7) | 0.0018 (7) |
O2 | 0.0524 (7) | 0.0388 (7) | 0.0599 (8) | 0.0050 (6) | 0.0123 (6) | 0.0063 (6) |
O3 | 0.0532 (7) | 0.0369 (7) | 0.0564 (8) | 0.0026 (6) | 0.0136 (6) | −0.0042 (6) |
O4 | 0.0564 (8) | 0.0358 (7) | 0.0542 (8) | 0.0024 (6) | 0.0040 (6) | −0.0025 (6) |
O5 | 0.0673 (9) | 0.0386 (7) | 0.0513 (7) | 0.0102 (6) | 0.0072 (6) | −0.0010 (6) |
O6 | 0.0794 (10) | 0.0691 (10) | 0.0623 (9) | −0.0344 (8) | 0.0185 (8) | −0.0005 (7) |
O7 | 0.0736 (10) | 0.1064 (13) | 0.0537 (9) | −0.0336 (9) | 0.0157 (7) | −0.0312 (9) |
C1—O1 | 1.214 (2) | C13—C14 | 1.523 (3) |
C1—N3 | 1.377 (2) | C13—C16 | 1.528 (3) |
C1—N2 | 1.378 (2) | C13—C17 | 1.529 (3) |
C3—O2 | 1.311 (2) | C14—C15 | 1.486 (2) |
C3—C4 | 1.368 (2) | C14—H14A | 0.9700 |
C3—N3 | 1.370 (2) | C14—H14B | 0.9700 |
C4—C5 | 1.408 (2) | C15—O5 | 1.320 (2) |
C4—C9 | 1.516 (2) | C16—H16A | 0.9600 |
C5—O3 | 1.249 (2) | C16—H16B | 0.9600 |
C5—N2 | 1.386 (2) | C16—H16C | 0.9600 |
C7—N2 | 1.464 (2) | C17—H17A | 0.9600 |
C7—H7A | 0.9600 | C17—H17B | 0.9600 |
C7—H7B | 0.9600 | C17—H17C | 0.9600 |
C7—H7C | 0.9600 | C18—C19 | 1.382 (2) |
C8—N3 | 1.470 (2) | C18—C23 | 1.387 (2) |
C8—H8A | 0.9600 | C19—C20 | 1.382 (2) |
C8—H8B | 0.9600 | C19—H19 | 0.9300 |
C8—H8C | 0.9600 | C20—C21 | 1.372 (2) |
C9—C10 | 1.518 (2) | C20—H20 | 0.9300 |
C9—C18 | 1.533 (2) | C21—C22 | 1.370 (2) |
C9—H9 | 0.9800 | C21—N1 | 1.465 (2) |
C10—C15 | 1.363 (2) | C22—C23 | 1.378 (3) |
C10—C11 | 1.430 (2) | C22—H22 | 0.9300 |
C11—O4 | 1.252 (2) | C23—H23 | 0.9300 |
C11—C12 | 1.498 (2) | N1—O7 | 1.2112 (19) |
C12—C13 | 1.520 (3) | N1—O6 | 1.211 (2) |
C12—H12A | 0.9700 | O2—H2 | 0.8200 |
C12—H12B | 0.9700 | O5—H5 | 0.8200 |
O1—C1—N3 | 122.09 (18) | C15—C14—H14A | 108.6 |
O1—C1—N2 | 122.13 (18) | C13—C14—H14A | 108.6 |
N3—C1—N2 | 115.77 (15) | C15—C14—H14B | 108.6 |
O2—C3—C4 | 124.97 (16) | C13—C14—H14B | 108.6 |
O2—C3—N3 | 113.98 (15) | H14A—C14—H14B | 107.6 |
C4—C3—N3 | 121.04 (16) | O5—C15—C10 | 123.67 (16) |
C3—C4—C5 | 118.45 (15) | O5—C15—C14 | 112.99 (15) |
C3—C4—C9 | 121.19 (15) | C10—C15—C14 | 123.34 (16) |
C5—C4—C9 | 120.36 (15) | C13—C16—H16A | 109.5 |
O3—C5—N2 | 117.92 (15) | C13—C16—H16B | 109.5 |
O3—C5—C4 | 124.36 (16) | H16A—C16—H16B | 109.5 |
N2—C5—C4 | 117.72 (15) | C13—C16—H16C | 109.5 |
N2—C7—H7A | 109.5 | H16A—C16—H16C | 109.5 |
N2—C7—H7B | 109.5 | H16B—C16—H16C | 109.5 |
H7A—C7—H7B | 109.5 | C13—C17—H17A | 109.5 |
N2—C7—H7C | 109.5 | C13—C17—H17B | 109.5 |
H7A—C7—H7C | 109.5 | H17A—C17—H17B | 109.5 |
H7B—C7—H7C | 109.5 | C13—C17—H17C | 109.5 |
N3—C8—H8A | 109.5 | H17A—C17—H17C | 109.5 |
N3—C8—H8B | 109.5 | H17B—C17—H17C | 109.5 |
H8A—C8—H8B | 109.5 | C19—C18—C23 | 117.61 (15) |
N3—C8—H8C | 109.5 | C19—C18—C9 | 120.83 (14) |
H8A—C8—H8C | 109.5 | C23—C18—C9 | 121.44 (15) |
H8B—C8—H8C | 109.5 | C18—C19—C20 | 121.72 (15) |
C4—C9—C10 | 113.70 (13) | C18—C19—H19 | 119.1 |
C4—C9—C18 | 113.04 (13) | C20—C19—H19 | 119.1 |
C10—C9—C18 | 115.04 (13) | C21—C20—C19 | 118.56 (15) |
C4—C9—H9 | 104.5 | C21—C20—H20 | 120.7 |
C10—C9—H9 | 104.5 | C19—C20—H20 | 120.7 |
C18—C9—H9 | 104.5 | C22—C21—C20 | 121.60 (16) |
C15—C10—C11 | 117.41 (15) | C22—C21—N1 | 120.00 (15) |
C15—C10—C9 | 125.47 (15) | C20—C21—N1 | 118.40 (15) |
C11—C10—C9 | 116.62 (14) | C21—C22—C23 | 118.80 (16) |
O4—C11—C10 | 121.82 (16) | C21—C22—H22 | 120.6 |
O4—C11—C12 | 117.81 (15) | C23—C22—H22 | 120.6 |
C10—C11—C12 | 120.28 (15) | C22—C23—C18 | 121.59 (16) |
C11—C12—C13 | 114.57 (15) | C22—C23—H23 | 119.2 |
C11—C12—H12A | 108.6 | C18—C23—H23 | 119.2 |
C13—C12—H12A | 108.6 | O7—N1—O6 | 123.01 (16) |
C11—C12—H12B | 108.6 | O7—N1—C21 | 118.45 (15) |
C13—C12—H12B | 108.6 | O6—N1—C21 | 118.55 (15) |
H12A—C12—H12B | 107.6 | C1—N2—C5 | 123.91 (15) |
C12—C13—C14 | 106.95 (16) | C1—N2—C7 | 117.79 (15) |
C12—C13—C16 | 109.98 (17) | C5—N2—C7 | 118.24 (15) |
C14—C13—C16 | 109.41 (17) | C3—N3—C1 | 122.31 (15) |
C12—C13—C17 | 110.12 (17) | C3—N3—C8 | 120.72 (16) |
C14—C13—C17 | 111.65 (17) | C1—N3—C8 | 116.91 (16) |
C16—C13—C17 | 108.70 (18) | C3—O2—H2 | 109.5 |
C15—C14—C13 | 114.76 (15) | C15—O5—H5 | 109.5 |
O2—C3—C4—C5 | −170.34 (15) | C4—C9—C18—C19 | 159.10 (15) |
N3—C3—C4—C5 | 8.5 (2) | C10—C9—C18—C19 | 26.2 (2) |
O2—C3—C4—C9 | 8.9 (3) | C4—C9—C18—C23 | −24.9 (2) |
N3—C3—C4—C9 | −172.22 (15) | C10—C9—C18—C23 | −157.83 (16) |
C3—C4—C5—O3 | 171.47 (16) | C23—C18—C19—C20 | 3.2 (3) |
C9—C4—C5—O3 | −7.8 (2) | C9—C18—C19—C20 | 179.29 (15) |
C3—C4—C5—N2 | −9.4 (2) | C18—C19—C20—C21 | −0.3 (3) |
C9—C4—C5—N2 | 171.30 (14) | C19—C20—C21—C22 | −2.4 (3) |
C3—C4—C9—C10 | −96.64 (18) | C19—C20—C21—N1 | 177.59 (15) |
C5—C4—C9—C10 | 82.59 (19) | C20—C21—C22—C23 | 2.1 (3) |
C3—C4—C9—C18 | 129.82 (16) | N1—C21—C22—C23 | −177.94 (17) |
C5—C4—C9—C18 | −51.0 (2) | C21—C22—C23—C18 | 1.0 (3) |
C4—C9—C10—C15 | −86.4 (2) | C19—C18—C23—C22 | −3.5 (3) |
C18—C9—C10—C15 | 46.2 (2) | C9—C18—C23—C22 | −179.63 (18) |
C4—C9—C10—C11 | 85.25 (17) | C22—C21—N1—O7 | 4.9 (3) |
C18—C9—C10—C11 | −142.16 (15) | C20—C21—N1—O7 | −175.09 (18) |
C15—C10—C11—O4 | 166.07 (16) | C22—C21—N1—O6 | −175.25 (18) |
C9—C10—C11—O4 | −6.3 (2) | C20—C21—N1—O6 | 4.7 (2) |
C15—C10—C11—C12 | −10.5 (2) | O1—C1—N2—C5 | −177.80 (16) |
C9—C10—C11—C12 | 177.14 (14) | N3—C1—N2—C5 | 3.8 (2) |
O4—C11—C12—C13 | 159.47 (16) | O1—C1—N2—C7 | −0.6 (3) |
C10—C11—C12—C13 | −23.8 (2) | N3—C1—N2—C7 | −179.05 (15) |
C11—C12—C13—C14 | 50.5 (2) | O3—C5—N2—C1 | −177.50 (15) |
C11—C12—C13—C16 | 169.25 (18) | C4—C5—N2—C1 | 3.4 (2) |
C11—C12—C13—C17 | −71.0 (2) | O3—C5—N2—C7 | 5.4 (2) |
C12—C13—C14—C15 | −47.2 (2) | C4—C5—N2—C7 | −173.79 (15) |
C16—C13—C14—C15 | −166.26 (18) | O2—C3—N3—C1 | 177.86 (15) |
C17—C13—C14—C15 | 73.4 (2) | C4—C3—N3—C1 | −1.1 (2) |
C11—C10—C15—O5 | −165.52 (16) | O2—C3—N3—C8 | −5.1 (2) |
C9—C10—C15—O5 | 6.1 (3) | C4—C3—N3—C8 | 175.86 (17) |
C11—C10—C15—C14 | 14.3 (3) | O1—C1—N3—C3 | 176.59 (16) |
C9—C10—C15—C14 | −174.07 (16) | N2—C1—N3—C3 | −5.0 (2) |
C13—C14—C15—O5 | −163.61 (17) | O1—C1—N3—C8 | −0.5 (3) |
C13—C14—C15—C10 | 16.5 (3) | N2—C1—N3—C8 | 177.89 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
C14—H14B···O3i | 0.97 | 2.57 | 3.328 (2) | 135 |
C20—H20···O7i | 0.93 | 2.53 | 3.153 (2) | 125 |
O2—H2···O4 | 0.82 | 1.78 | 2.5932 (18) | 172 |
O5—H5···O3 | 0.82 | 1.78 | 2.5863 (18) | 167 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C14—H14B···O3i | 0.97 | 2.57 | 3.328 (2) | 135 |
C20—H20···O7i | 0.93 | 2.53 | 3.153 (2) | 125 |
O2—H2···O4 | 0.82 | 1.78 | 2.5932 (18) | 172 |
O5—H5···O3 | 0.82 | 1.78 | 2.5863 (18) | 167 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
Acknowledgements
The authors thank Dr Babu Varghese and the SAIF, IIT Madras, for the data collection.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Organic compounds containing pyrimidine scaffold as a core unit are important targets and are known to exhibit various biological and pharmaceutical activities (Kappe, 1993; Ibrahim & El-Metwally, 2010). Dihydropyridine derivatives are particularly well known in pharmacology as L-type calcium channel blockers (Campbell et al., 1988; Elinson et al., 2006; Sun et al., 2006).
In the title compound, the bond lengths (Allen et al., 1987) and angles are generally within normal ranges. The pyrimidinedione ring P(N2/C1/N3/C3/C4/C5) and the cyclohexenone ring Q(C10–C15) are not planar with total puckering amplitude Q(T) of 0.0868 (18) Å (for P) and 0.4810 (2) Å (for Q). The pyrimidinedione ring (P) adopts a screw-boat conformation, whereas the cyclohexenone ring (Q) adopts an envelope conformation and atom C13 is described as the flap atom being away from the plane of the ring with deviation 0.334 (2) Å. These conformations can be rationalized by the respective puckering parameters (Cremer & Pople, 1975) ϕ = 248.7 (12)°, θ = 76.6 (12)° (for P) and ϕ = -4.90 (3)°, θ = 115.1 (2)° (for Q). The dihedral angle between the mean palnes of the pyrimidinedione ring P and the cyclohexenone plane Q is 58.78 (2)°. The ring P and the plane Q form dihedral angles of 59.94 (3) and 54.73 (2)°, respectively, with the 4-nitrophenyl ring. The hydroxy and carbonyl oxygen atoms face each other and are oriented to allow for the formation of two intramolecular O—H···O hydrogen bonds (Table 1 and Fig. 2) typical for bisdimedone derivatives (Sughanya & Sureshbabu, 2012).