metal-organic compounds
Redetermination of bis(acetylacetonato-κ2O,O′)(1,10-phenanthroline-κ2N,N′)manganese(II)
aInstitut für Anorganische Chemie, Christian-Albrechts-Universität Kiel, Max-Eyth-Strasse 2, 24118 Kiel, Germany
*Correspondence e-mail: ssuckert@ac.uni-kiel.de
In the 5H7O2)2(C12H8N2)], the Mn2+ cation is coordinated by one bidentate 1,10-phenanthroline ligand and two acetylacetonate anions within a slightly distorted N2O4 octahedron. The consists of one Mn2+ cation situated on a twofold rotation axis, one half of a 1,10-phenanthroline ligand and one acetylacetonate anion. In comparison with the previous determination based on visually estimated intensities recorded on precession photographs, the current redetermination with image-plate data reveals bond lengths and angles with much higher precision.
of the title compound, [Mn(CCCDC reference: 967054
Experimental
Crystal data
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Data collection: X-AREA (Stoe & Cie, 2008); cell X-AREA; data reduction: X-AREA); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2011); software used to prepare material for publication: SHELXTL and publCIF (Westrip, 2010).
Supporting information
CCDC reference: 967054
10.1107/S1600536813028614/wm2774sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813028614/wm2774Isup2.hkl
Manganese(III) 2,4-pentadionate and 1,10-phenanthroline were purchased from Alfa Aesar. Potassium cyanate was purchased from Fluka. The title compound was obtained by the reaction of 70.5 mg Mn(III) 2,4-pentadionate (0.20 mmol), 48.7 mg potassium cyanate (0.6 mmol) and 144.32 mg 1,10-phenanthroline (0.8 mmol) in 1.5 ml acetonitrile at RT in a closed 3 ml snap cap vial. After three days brown crystals of the title compound, mostly in the form of needles, were obtained by slow evaporation of the solvent.
The aromatic hydrogen atoms were positioned with idealized geometry, methyl H atoms were allowed to rotate but not to tip, and were refined with Ueq(H) = 1.2 Ueq(C) for aromatic H atoms (1.5 for methyl H atoms) using a riding model with C—H = 0.95 Å (aromatic) and with C—H = 0.98 Å (methyl).
Data collection: X-AREA (Stoe & Cie, 2008); cell
X-AREA (Stoe & Cie, 2008); data reduction: X-AREA (Stoe & Cie, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2011); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and publCIF (Westrip, 2010).[Mn(C5H7O2)2(C12H8N2)] | F(000) = 900 |
Mr = 433.36 | Dx = 1.405 Mg m−3 |
Orthorhombic, Pbcn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2n 2ab | Cell parameters from 17733 reflections |
a = 15.8353 (7) Å | θ = 1.9–26.0° |
b = 10.2260 (4) Å | µ = 0.68 mm−1 |
c = 12.6532 (4) Å | T = 200 K |
V = 2048.96 (14) Å3 | Plate, brown |
Z = 4 | 0.31 × 0.19 × 0.08 mm |
Stoe IPDS-2 diffractometer | 1742 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.086 |
Graphite monochromator | θmax = 26.0°, θmin = 2.4° |
ω scans | h = −19→19 |
14233 measured reflections | k = −10→12 |
2007 independent reflections | l = −14→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.103 | H-atom parameters constrained |
S = 1.16 | w = 1/[σ2(Fo2) + (0.0406P)2 + 0.9028P] where P = (Fo2 + 2Fc2)/3 |
2007 reflections | (Δ/σ)max < 0.001 |
134 parameters | Δρmax = 0.26 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
[Mn(C5H7O2)2(C12H8N2)] | V = 2048.96 (14) Å3 |
Mr = 433.36 | Z = 4 |
Orthorhombic, Pbcn | Mo Kα radiation |
a = 15.8353 (7) Å | µ = 0.68 mm−1 |
b = 10.2260 (4) Å | T = 200 K |
c = 12.6532 (4) Å | 0.31 × 0.19 × 0.08 mm |
Stoe IPDS-2 diffractometer | 1742 reflections with I > 2σ(I) |
14233 measured reflections | Rint = 0.086 |
2007 independent reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.103 | H-atom parameters constrained |
S = 1.16 | Δρmax = 0.26 e Å−3 |
2007 reflections | Δρmin = −0.26 e Å−3 |
134 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Mn1 | 0.5000 | 0.52826 (5) | 0.7500 | 0.03271 (17) | |
C1 | 0.23055 (17) | 0.4974 (4) | 0.8396 (3) | 0.0658 (9) | |
H1A | 0.2197 | 0.4070 | 0.8179 | 0.099* | |
H1B | 0.1819 | 0.5521 | 0.8213 | 0.099* | |
H1C | 0.2398 | 0.5004 | 0.9162 | 0.099* | |
C2 | 0.30819 (15) | 0.5480 (3) | 0.7834 (2) | 0.0425 (6) | |
C3 | 0.29703 (16) | 0.6189 (3) | 0.6895 (2) | 0.0502 (7) | |
H3 | 0.2406 | 0.6335 | 0.6668 | 0.060* | |
C4 | 0.36143 (15) | 0.6699 (2) | 0.6268 (2) | 0.0432 (6) | |
C5 | 0.3379 (2) | 0.7457 (3) | 0.5282 (3) | 0.0675 (9) | |
H5A | 0.3697 | 0.8279 | 0.5261 | 0.101* | |
H5B | 0.2772 | 0.7648 | 0.5291 | 0.101* | |
H5C | 0.3515 | 0.6935 | 0.4655 | 0.101* | |
O1 | 0.37816 (10) | 0.52168 (17) | 0.82556 (13) | 0.0406 (4) | |
O2 | 0.43944 (10) | 0.65765 (17) | 0.64402 (14) | 0.0435 (4) | |
N11 | 0.53476 (11) | 0.34743 (18) | 0.84839 (14) | 0.0328 (4) | |
C11 | 0.56836 (14) | 0.3481 (2) | 0.94437 (18) | 0.0362 (5) | |
H11 | 0.5787 | 0.4300 | 0.9775 | 0.043* | |
C12 | 0.58922 (14) | 0.2340 (2) | 0.99889 (19) | 0.0386 (5) | |
H12 | 0.6137 | 0.2388 | 1.0673 | 0.046* | |
C13 | 0.57416 (14) | 0.1155 (2) | 0.95299 (18) | 0.0377 (5) | |
H13 | 0.5884 | 0.0371 | 0.9892 | 0.045* | |
C14 | 0.53730 (13) | 0.1099 (2) | 0.85136 (18) | 0.0341 (5) | |
C15 | 0.51892 (13) | 0.2298 (2) | 0.80233 (17) | 0.0315 (5) | |
C16 | 0.51771 (14) | −0.0106 (2) | 0.7983 (2) | 0.0378 (5) | |
H16 | 0.5300 | −0.0915 | 0.8319 | 0.045* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Mn1 | 0.0362 (3) | 0.0284 (3) | 0.0335 (3) | 0.000 | −0.00258 (19) | 0.000 |
C1 | 0.0468 (15) | 0.088 (3) | 0.063 (2) | −0.0034 (15) | 0.0073 (13) | 0.0081 (17) |
C2 | 0.0378 (12) | 0.0447 (14) | 0.0448 (14) | 0.0015 (10) | 0.0007 (10) | −0.0077 (11) |
C3 | 0.0371 (12) | 0.0531 (16) | 0.0603 (18) | 0.0019 (11) | −0.0077 (12) | 0.0058 (13) |
C4 | 0.0458 (13) | 0.0320 (12) | 0.0517 (15) | −0.0019 (10) | −0.0132 (11) | 0.0024 (11) |
C5 | 0.0617 (17) | 0.0625 (19) | 0.078 (2) | −0.0140 (15) | −0.0290 (16) | 0.0291 (17) |
O1 | 0.0387 (8) | 0.0461 (10) | 0.0370 (9) | 0.0003 (7) | 0.0000 (7) | −0.0026 (7) |
O2 | 0.0406 (8) | 0.0395 (9) | 0.0504 (10) | −0.0021 (7) | −0.0056 (8) | 0.0119 (8) |
N11 | 0.0391 (9) | 0.0296 (9) | 0.0297 (10) | −0.0001 (7) | −0.0014 (7) | −0.0005 (8) |
C11 | 0.0407 (11) | 0.0359 (12) | 0.0320 (12) | 0.0009 (9) | −0.0012 (9) | −0.0016 (10) |
C12 | 0.0422 (12) | 0.0417 (13) | 0.0320 (12) | 0.0024 (10) | −0.0046 (9) | 0.0014 (10) |
C13 | 0.0411 (12) | 0.0373 (13) | 0.0348 (12) | 0.0049 (10) | 0.0005 (9) | 0.0075 (10) |
C14 | 0.0374 (11) | 0.0330 (11) | 0.0320 (12) | 0.0028 (9) | 0.0026 (9) | 0.0021 (10) |
C15 | 0.0346 (10) | 0.0301 (11) | 0.0297 (12) | 0.0000 (8) | 0.0016 (8) | 0.0005 (9) |
C16 | 0.0419 (12) | 0.0289 (11) | 0.0426 (14) | 0.0024 (9) | 0.0049 (10) | 0.0051 (10) |
Mn1—O2i | 2.1139 (16) | C5—H5A | 0.9800 |
Mn1—O2 | 2.1139 (16) | C5—H5B | 0.9800 |
Mn1—O1i | 2.1543 (16) | C5—H5C | 0.9800 |
Mn1—O1 | 2.1543 (16) | N11—C11 | 1.326 (3) |
Mn1—N11i | 2.2962 (18) | N11—C15 | 1.360 (3) |
Mn1—N11 | 2.2962 (18) | C11—C12 | 1.395 (3) |
C1—C2 | 1.512 (4) | C11—H11 | 0.9500 |
C1—H1A | 0.9800 | C12—C13 | 1.366 (3) |
C1—H1B | 0.9800 | C12—H12 | 0.9500 |
C1—H1C | 0.9800 | C13—C14 | 1.413 (3) |
C2—O1 | 1.259 (3) | C13—H13 | 0.9500 |
C2—C3 | 1.403 (4) | C14—C15 | 1.405 (3) |
C3—C4 | 1.394 (4) | C14—C16 | 1.437 (3) |
C3—H3 | 0.9500 | C15—C15i | 1.453 (4) |
C4—O2 | 1.261 (3) | C16—C16i | 1.344 (5) |
C4—C5 | 1.515 (4) | C16—H16 | 0.9500 |
O2i—Mn1—O2 | 102.50 (10) | C4—C5—H5A | 109.5 |
O2i—Mn1—O1i | 83.96 (6) | C4—C5—H5B | 109.5 |
O2—Mn1—O1i | 98.30 (6) | H5A—C5—H5B | 109.5 |
O2i—Mn1—O1 | 98.30 (6) | C4—C5—H5C | 109.5 |
O2—Mn1—O1 | 83.96 (6) | H5A—C5—H5C | 109.5 |
O1i—Mn1—O1 | 176.42 (10) | H5B—C5—H5C | 109.5 |
O2i—Mn1—N11i | 163.09 (7) | C2—O1—Mn1 | 126.41 (16) |
O2—Mn1—N11i | 92.95 (7) | C4—O2—Mn1 | 128.08 (16) |
O1i—Mn1—N11i | 87.07 (6) | C11—N11—C15 | 118.14 (19) |
O1—Mn1—N11i | 90.04 (7) | C11—N11—Mn1 | 126.04 (15) |
O2i—Mn1—N11 | 92.95 (7) | C15—N11—Mn1 | 115.82 (14) |
O2—Mn1—N11 | 163.09 (7) | N11—C11—C12 | 122.9 (2) |
O1i—Mn1—N11 | 90.04 (6) | N11—C11—H11 | 118.5 |
O1—Mn1—N11 | 87.07 (6) | C12—C11—H11 | 118.5 |
N11i—Mn1—N11 | 72.71 (9) | C13—C12—C11 | 119.4 (2) |
C2—C1—H1A | 109.5 | C13—C12—H12 | 120.3 |
C2—C1—H1B | 109.5 | C11—C12—H12 | 120.3 |
H1A—C1—H1B | 109.5 | C12—C13—C14 | 119.7 (2) |
C2—C1—H1C | 109.5 | C12—C13—H13 | 120.2 |
H1A—C1—H1C | 109.5 | C14—C13—H13 | 120.2 |
H1B—C1—H1C | 109.5 | C15—C14—C13 | 116.9 (2) |
O1—C2—C3 | 125.5 (2) | C15—C14—C16 | 119.8 (2) |
O1—C2—C1 | 116.3 (2) | C13—C14—C16 | 123.3 (2) |
C3—C2—C1 | 118.2 (2) | N11—C15—C14 | 123.0 (2) |
C4—C3—C2 | 125.7 (2) | N11—C15—C15i | 117.82 (12) |
C4—C3—H3 | 117.1 | C14—C15—C15i | 119.19 (13) |
C2—C3—H3 | 117.1 | C16i—C16—C14 | 120.99 (13) |
O2—C4—C3 | 125.5 (2) | C16i—C16—H16 | 119.5 |
O2—C4—C5 | 115.8 (2) | C14—C16—H16 | 119.5 |
C3—C4—C5 | 118.7 (2) |
Symmetry code: (i) −x+1, y, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | [Mn(C5H7O2)2(C12H8N2)] |
Mr | 433.36 |
Crystal system, space group | Orthorhombic, Pbcn |
Temperature (K) | 200 |
a, b, c (Å) | 15.8353 (7), 10.2260 (4), 12.6532 (4) |
V (Å3) | 2048.96 (14) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.68 |
Crystal size (mm) | 0.31 × 0.19 × 0.08 |
Data collection | |
Diffractometer | Stoe IPDS2 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14233, 2007, 1742 |
Rint | 0.086 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.103, 1.16 |
No. of reflections | 2007 |
No. of parameters | 134 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.26, −0.26 |
Computer programs: X-AREA (Stoe & Cie, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), XP in SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2011), SHELXTL (Sheldrick, 2008) and publCIF (Westrip, 2010).
Acknowledgements
We gratefully acknowledge financial support by the DFG (project No. NA 720/3–1) and the State of Schleswig–Holstein. We thank Professor Dr Wolfgang Bensch for access to his experimental facilities.
References
Brandenburg, K. (2011). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Stephens, F. S. (1977). Acta Cryst. B33, 3492–3495. CSD CrossRef CAS IUCr Journals Web of Science Google Scholar
Stoe & Cie (2008). X-AREA. Stoe & Cie, Darmstadt, Germany. Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The title compound was serendipitously obtained within a project on the synthesis of manganese(III) coordination polymers containing cyanate anions and neutral N-donor co-ligands. Within this project manganese(III) acetylacetonate was reacted with 1,10-phenanthroline and potassium cyanate in acetonitrile leading to the formation of crystals of the title compound, the composition of which was determined by X-ray structure analysis. The crystal structure of this compound has already been reported by Stephens (1977) from visually estimated intensity data recorded on precession photographs. We decided to redetermine the structure on basis of image plate intensity data to achieve higher precision with respect to lattice parameters, atomic coordinates and resulting bond lengths and angles.
The manganese(II) cation is coordinated by two nitrogen atoms of the 1,10-phenanthroline ligand and four oxygen atoms of two symmetry-related acetylacetonate anions into discrete complexes that are located on twofold rotation axes (Fig. 1). The coordination polyhedron of the manganese(II) cation can be described as a slightly distorted MnN4O2 octahedron. Bond lengths and angles are comparable to those of the previous determination (Stephens, 1977), however with much higher precision, e.g. 2.2962 (18) Å for the Mn—N, and 2.1139 (16) and 2.1543 (16) Å for the two Mn—O bond lengths determined during the present redetermination versus 2.307 (5), 2.116 (5) and 2.152 (5) Å, respectively, of the previous determination.
Individual complex molecules are mainly held together by van der Waals forces. In the crystal structure, the discrete complexes are arranged in columns extending parallel to [001] (Fig. 2). Within these columns neighbouring complexes are related by centers of inversion.