organic compounds
2-Aminobenzoic acid–4-[2-(pyridin-4-yl)ethyl]pyridine (2/1)
aDepartment of Chemistry, The University of Texas at San Antonio, One UTSA Circle, San Antonio, Texas 78249-0698, USA, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
The 12H12N2·2C7H7NO2, comprises a centrosymmetric 4-[2-(pyridin-4-yl)ethyl]pyridine molecule and a 2-aminobenzoic acid molecule in a general position. The acid has a small twist between the carboxylic acid residue and the ring [dihedral angle = 7.13 (6)°] despite the presence of an intramolecular N—H⋯O(carbonyl) hydrogen bond. Three-molecule aggregates are formed via O—H⋯N(pyridyl) hydrogen bonds, and these are connected into supramolecular layers in the bc plane by N—H⋯O(carbonyl) hydrogen bonds and π–π interactions between pyridine and benzene rings [inter-centroid distance = 3.6332 (9) Å]. Layers are connected along the a axis by weak π–π interactions between benzene rings [3.9577 (10) Å].
of the title CCCDC reference: 964447
Related literature
For co-crystals of 2-aminobenzoic acid with pyridyl derivatives, see: Arman, Kaulgud et al. (2012); Arman, Miller et al. (2012). For the isostructural 4,4′-bipyridyl analogue, see: Arman & Tiekink (2013).
Experimental
Crystal data
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Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
CCDC reference: 964447
10.1107/S1600536813027128/xu5744sup1.cif
contains datablocks general, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813027128/xu5744Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536813027128/xu5744Isup3.cml
Crystals of (I) were obtained by the co-crystallization of 4,4'-bipyridylethane (Sigma Aldrich, 0.11 mmol) and anthranilic acid (Sigma-Aldrich, 0.22 mmol) in acetone solution. Crystals were obtained by slow evaporation. Melting point: 381–385 K. IR spectra(cm-1): 750(sh)(m), 830(s)(sh), 1016(w), 1063(w), 1153(m), 1238(m), 1295(s), 1413(m), 1607(m), 1661(m), 2922(br), 3342(m), 3449(m).
C-bound H-atoms were placed in calculated positions (C—H = 0.95-0.99 Å) and were included in the
in the riding model approximation with Uiso(H) set to 1.2Ueq(C). The O-bound and N-bound H-atoms were located in a difference Fourier map and were refined with a distance restraints of O—H = 0.84±0.01 Å and N—H = 0.88±0.01 Å, and with Uiso(H) = 1.2Ueq(N) and 1.5Ueq(O).Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell
CrystalClear (Molecular Structure Corporation & Rigaku, 2005); data reduction: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).C12H12N2·2C7H7NO2 | F(000) = 484 |
Mr = 458.51 | Dx = 1.372 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71069 Å |
Hall symbol: -P 2ybc | Cell parameters from 3826 reflections |
a = 11.305 (2) Å | θ = 2.6–40.2° |
b = 11.102 (2) Å | µ = 0.09 mm−1 |
c = 8.8737 (16) Å | T = 98 K |
β = 94.565 (5)° | Needle, gold |
V = 1110.2 (4) Å3 | 0.34 × 0.10 × 0.07 mm |
Z = 2 |
Rigaku AFC12K/SATURN724 diffractometer | 2545 independent reflections |
Radiation source: fine-focus sealed tube | 2386 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.039 |
ω scans | θmax = 27.5°, θmin = 2.6° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −14→14 |
Tmin = 0.864, Tmax = 1.000 | k = −14→14 |
8527 measured reflections | l = −9→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0469P)2 + 0.5018P] where P = (Fo2 + 2Fc2)/3 |
2545 reflections | (Δ/σ)max < 0.001 |
163 parameters | Δρmax = 0.36 e Å−3 |
3 restraints | Δρmin = −0.21 e Å−3 |
C12H12N2·2C7H7NO2 | V = 1110.2 (4) Å3 |
Mr = 458.51 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.305 (2) Å | µ = 0.09 mm−1 |
b = 11.102 (2) Å | T = 98 K |
c = 8.8737 (16) Å | 0.34 × 0.10 × 0.07 mm |
β = 94.565 (5)° |
Rigaku AFC12K/SATURN724 diffractometer | 2545 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 2386 reflections with I > 2σ(I) |
Tmin = 0.864, Tmax = 1.000 | Rint = 0.039 |
8527 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 3 restraints |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.36 e Å−3 |
2545 reflections | Δρmin = −0.21 e Å−3 |
163 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.23122 (9) | 0.08940 (8) | 0.22847 (10) | 0.0230 (2) | |
H1O | 0.2610 (14) | 0.0684 (16) | 0.3166 (13) | 0.035* | |
O2 | 0.24830 (8) | −0.11075 (8) | 0.19402 (10) | 0.0221 (2) | |
N1 | 0.18511 (11) | −0.19962 (10) | −0.08352 (12) | 0.0232 (3) | |
H1N | 0.2156 (13) | −0.2139 (15) | 0.0061 (12) | 0.028* | |
H2N | 0.1885 (14) | −0.2498 (12) | −0.1548 (14) | 0.028* | |
C1 | 0.15987 (10) | 0.01116 (10) | −0.00795 (13) | 0.0161 (2) | |
C2 | 0.15020 (10) | −0.08349 (11) | −0.11662 (13) | 0.0172 (2) | |
C3 | 0.10295 (11) | −0.05498 (11) | −0.26429 (13) | 0.0193 (3) | |
H3 | 0.0973 | −0.1160 | −0.3396 | 0.023* | |
C4 | 0.06456 (11) | 0.06078 (12) | −0.30126 (13) | 0.0208 (3) | |
H4 | 0.0332 | 0.0776 | −0.4016 | 0.025* | |
C5 | 0.07110 (11) | 0.15347 (11) | −0.19362 (14) | 0.0204 (3) | |
H5 | 0.0436 | 0.2322 | −0.2196 | 0.024* | |
C6 | 0.11832 (10) | 0.12773 (11) | −0.04894 (13) | 0.0181 (3) | |
H6 | 0.1230 | 0.1899 | 0.0249 | 0.022* | |
C7 | 0.21531 (10) | −0.01002 (11) | 0.14633 (13) | 0.0172 (2) | |
N2 | 0.32920 (9) | 0.04519 (10) | 0.50153 (11) | 0.0194 (2) | |
C8 | 0.36977 (11) | −0.06728 (11) | 0.53384 (13) | 0.0199 (3) | |
H8 | 0.3642 | −0.1262 | 0.4559 | 0.024* | |
C9 | 0.41896 (11) | −0.10008 (11) | 0.67537 (13) | 0.0195 (3) | |
H9 | 0.4450 | −0.1805 | 0.6939 | 0.023* | |
C10 | 0.43024 (10) | −0.01417 (11) | 0.79159 (13) | 0.0175 (3) | |
C11 | 0.38823 (11) | 0.10211 (11) | 0.75721 (13) | 0.0189 (3) | |
H11 | 0.3940 | 0.1633 | 0.8323 | 0.023* | |
C12 | 0.33799 (11) | 0.12738 (11) | 0.61248 (13) | 0.0197 (3) | |
H12 | 0.3087 | 0.2063 | 0.5914 | 0.024* | |
C13 | 0.48476 (11) | −0.05171 (11) | 0.94524 (13) | 0.0192 (3) | |
H13A | 0.5581 | −0.0978 | 0.9316 | 0.023* | |
H13B | 0.4289 | −0.1066 | 0.9916 | 0.023* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0346 (5) | 0.0189 (5) | 0.0145 (4) | 0.0008 (4) | −0.0047 (4) | −0.0020 (3) |
O2 | 0.0306 (5) | 0.0181 (4) | 0.0170 (4) | 0.0008 (3) | −0.0013 (3) | 0.0020 (3) |
N1 | 0.0359 (6) | 0.0157 (5) | 0.0175 (5) | 0.0027 (4) | −0.0014 (4) | −0.0031 (4) |
C1 | 0.0178 (5) | 0.0164 (6) | 0.0141 (5) | −0.0013 (4) | 0.0019 (4) | −0.0001 (4) |
C2 | 0.0176 (5) | 0.0167 (6) | 0.0174 (5) | −0.0014 (4) | 0.0023 (4) | 0.0005 (4) |
C3 | 0.0227 (6) | 0.0200 (6) | 0.0151 (5) | −0.0039 (5) | 0.0009 (4) | −0.0026 (4) |
C4 | 0.0219 (6) | 0.0244 (6) | 0.0156 (5) | −0.0023 (5) | −0.0015 (4) | 0.0027 (4) |
C5 | 0.0222 (6) | 0.0176 (6) | 0.0211 (6) | 0.0022 (5) | 0.0002 (4) | 0.0031 (5) |
C6 | 0.0205 (5) | 0.0168 (6) | 0.0171 (5) | −0.0005 (4) | 0.0022 (4) | −0.0005 (4) |
C7 | 0.0194 (5) | 0.0176 (6) | 0.0148 (5) | −0.0006 (4) | 0.0027 (4) | 0.0005 (4) |
N2 | 0.0201 (5) | 0.0232 (5) | 0.0146 (5) | −0.0025 (4) | −0.0002 (4) | −0.0002 (4) |
C8 | 0.0223 (6) | 0.0206 (6) | 0.0166 (5) | −0.0023 (5) | 0.0009 (4) | −0.0032 (4) |
C9 | 0.0208 (6) | 0.0191 (6) | 0.0184 (6) | 0.0005 (4) | −0.0002 (4) | −0.0012 (4) |
C10 | 0.0170 (5) | 0.0209 (6) | 0.0144 (5) | −0.0017 (4) | 0.0003 (4) | 0.0000 (4) |
C11 | 0.0201 (6) | 0.0198 (6) | 0.0166 (5) | −0.0025 (4) | 0.0002 (4) | −0.0028 (4) |
C12 | 0.0212 (6) | 0.0194 (6) | 0.0184 (6) | −0.0013 (4) | 0.0002 (4) | 0.0009 (4) |
C13 | 0.0213 (6) | 0.0201 (6) | 0.0156 (5) | 0.0001 (5) | −0.0017 (4) | 0.0002 (5) |
O1—C7 | 1.3271 (14) | C6—H6 | 0.9500 |
O1—H1O | 0.859 (9) | N2—C12 | 1.3402 (16) |
O2—C7 | 1.2425 (15) | N2—C8 | 1.3530 (16) |
N1—C2 | 1.3732 (16) | C8—C9 | 1.3813 (17) |
N1—H1N | 0.856 (9) | C8—H8 | 0.9500 |
N1—H2N | 0.845 (9) | C9—C10 | 1.4031 (16) |
C1—C6 | 1.4144 (16) | C9—H9 | 0.9500 |
C1—C2 | 1.4246 (16) | C10—C11 | 1.4007 (17) |
C1—C7 | 1.4783 (16) | C10—C13 | 1.5096 (16) |
C2—C3 | 1.4111 (16) | C11—C12 | 1.3910 (16) |
C3—C4 | 1.3875 (18) | C11—H11 | 0.9500 |
C3—H3 | 0.9500 | C12—H12 | 0.9500 |
C4—C5 | 1.4020 (17) | C13—C13i | 1.526 (2) |
C4—H4 | 0.9500 | C13—H13A | 0.9900 |
C5—C6 | 1.3805 (16) | C13—H13B | 0.9900 |
C5—H5 | 0.9500 | ||
C7—O1—H1O | 107.5 (12) | O1—C7—C1 | 113.90 (10) |
C2—N1—H1N | 117.4 (11) | C12—N2—C8 | 117.95 (10) |
C2—N1—H2N | 119.2 (11) | N2—C8—C9 | 122.76 (11) |
H1N—N1—H2N | 122.3 (16) | N2—C8—H8 | 118.6 |
C6—C1—C2 | 119.66 (11) | C9—C8—H8 | 118.6 |
C6—C1—C7 | 119.43 (10) | C8—C9—C10 | 119.70 (11) |
C2—C1—C7 | 120.90 (11) | C8—C9—H9 | 120.1 |
N1—C2—C3 | 119.37 (11) | C10—C9—H9 | 120.1 |
N1—C2—C1 | 122.85 (11) | C11—C10—C9 | 117.20 (11) |
C3—C2—C1 | 117.78 (11) | C11—C10—C13 | 123.93 (11) |
C4—C3—C2 | 121.03 (11) | C9—C10—C13 | 118.87 (11) |
C4—C3—H3 | 119.5 | C12—C11—C10 | 119.56 (11) |
C2—C3—H3 | 119.5 | C12—C11—H11 | 120.2 |
C3—C4—C5 | 121.35 (11) | C10—C11—H11 | 120.2 |
C3—C4—H4 | 119.3 | N2—C12—C11 | 122.81 (12) |
C5—C4—H4 | 119.3 | N2—C12—H12 | 118.6 |
C6—C5—C4 | 118.50 (11) | C11—C12—H12 | 118.6 |
C6—C5—H5 | 120.7 | C10—C13—C13i | 115.01 (13) |
C4—C5—H5 | 120.7 | C10—C13—H13A | 108.5 |
C5—C6—C1 | 121.63 (11) | C13i—C13—H13A | 108.5 |
C5—C6—H6 | 119.2 | C10—C13—H13B | 108.5 |
C1—C6—H6 | 119.2 | C13i—C13—H13B | 108.5 |
O2—C7—O1 | 122.52 (11) | H13A—C13—H13B | 107.5 |
O2—C7—C1 | 123.52 (11) | ||
C6—C1—C2—N1 | −177.85 (11) | C6—C1—C7—O1 | −6.50 (16) |
C7—C1—C2—N1 | 3.56 (18) | C2—C1—C7—O1 | 172.09 (10) |
C6—C1—C2—C3 | 2.41 (17) | C12—N2—C8—C9 | 0.20 (18) |
C7—C1—C2—C3 | −176.18 (10) | N2—C8—C9—C10 | −1.20 (18) |
N1—C2—C3—C4 | 178.72 (11) | C8—C9—C10—C11 | 1.02 (17) |
C1—C2—C3—C4 | −1.53 (17) | C8—C9—C10—C13 | −179.72 (11) |
C2—C3—C4—C5 | −0.08 (18) | C9—C10—C11—C12 | 0.05 (17) |
C3—C4—C5—C6 | 0.82 (18) | C13—C10—C11—C12 | −179.16 (11) |
C4—C5—C6—C1 | 0.11 (18) | C8—N2—C12—C11 | 0.95 (18) |
C2—C1—C6—C5 | −1.75 (18) | C10—C11—C12—N2 | −1.08 (19) |
C7—C1—C6—C5 | 176.86 (11) | C11—C10—C13—C13i | −12.1 (2) |
C6—C1—C7—O2 | 176.01 (11) | C9—C10—C13—C13i | 168.71 (12) |
C2—C1—C7—O2 | −5.40 (18) |
Symmetry code: (i) −x+1, −y, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1n···O2 | 0.86 (1) | 2.03 (1) | 2.6961 (15) | 134 (2) |
O1—H1o···N2 | 0.86 (1) | 1.78 (1) | 2.6290 (14) | 172 (2) |
N1—H2n···O2ii | 0.85 (1) | 2.19 (1) | 3.0106 (15) | 163 (1) |
Symmetry code: (ii) x, −y−1/2, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1n···O2 | 0.856 (11) | 2.032 (13) | 2.6961 (15) | 133.7 (15) |
O1—H1o···N2 | 0.859 (13) | 1.776 (12) | 2.6290 (14) | 172.3 (17) |
N1—H2n···O2i | 0.846 (13) | 2.190 (13) | 3.0106 (15) | 163.3 (14) |
Symmetry code: (i) x, −y−1/2, z−1/2. |
Acknowledgements
We gratefully thank the Ministry of Higher Education (Malaysia) and the University of Malaya (UM) for funding structural studies through the High-Impact Research scheme (UM·C/HIR-MOHE/SC/03).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
During continuing structural studies of co-crystals involving 2-aminobenzoic acid (anthranilic acid) and variously substituted pyridyl derivatives (Arman, Kaulgud et al., 2012; Arman, Miller et al., 2012), the title co-crystal, (I), was characterized.
The asymmetric unit of (I), Fig. 1, comprises a molecule of 2-aminobenzoic acid in a general position and half a molecule of 4,4'-bipyridylethane, being disposed about a centre of inversion. Despite the presence of an intramolecular N1—H···O2 hydrogen bond, Table 1, the carboxylic acid residue is slightly twisted out of the plane of the benzene ring to which it is connected, forming a dihedral angle of 7.13 (6)°. The 4,4'-bipyridylethane molecule is also almost planar with the r.m.s. deviation of the 14 non-hydrogen atoms being 0.066 Å. The structure of (I) is isostructural with the 4,4'-bipyridyl derivative (Arman & Tiekink, 2013).
The components of the co-crystal are connected into a three-molecule aggregate via O1—H···N2 hydrogen bonds, Table 1. These are connected into supramolecular layers in the bc plane by N1—H···O2 hydrogen bonds, Fig. 2. Additional stability to the layers is afforded by π—π interactions between the pyridyl and benzene rings [inter-centroid distance = 3.6332 (9) Å, angle of inclination = 1.71 (6)° for symmetry operation x, y, 1 + z], Fig. 2. Weaker π—π interactions between centrosymmetrically related benzene rings [3.9577 (10) Å for symmetry operation: -x, -y, -z] provide the links between the layers, Fig. 3.