metal-organic compounds
catena-Poly[[tetra-μ-formato-κ8O:O′-dicopper(II)]-μ-hexamethylenetetramine-κ2N1:N5]
aChemical Engineering College, Qinghai University, Xining 810016, People's Republic of China
*Correspondence e-mail: caojf_334@163.com
In the title polymeric compound, [Cu2(HCO2)4(C6H12N4)]n, the CuII atom is five-coordinated in a square-pyramidal geometry that is defined by four O atoms from four formate ligands and one N atom from a hexamethylenetetramine ligand. The two CuII atoms are separated by 2.6850 (7) Å, and together with the four formate ligands they form a paddle-wheel unit. The hexamine ligand uses only two of its four N atoms to link Cu2 cluster units, affording a zigzag chain running along the b-axis direction. The hexamine ligand lies on a mirror plane.
CCDC reference: 973193
Related literature
For background to hexamine chemistry, see: Dreyfors et al. (1989); Kirillov (2011). For hexamine as a bridging ligand, see: Pickardt (1981); Konar et al. (2003); Wang et al. (2002). For paddle-wheel Cu2-cluster units, see: Konar et al. (2003); Chiari et al. (1988); Wu & Wang (2004); Sun et al. (2009).
Experimental
Crystal data
|
Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
CCDC reference: 973193
10.1107/S160053681303184X/ng5345sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681303184X/ng5345Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681303184X/ng5345Isup3.mol
The title compound was synthesized by the following method. Copper(II) formate tetrahydrate (0.015 g, 0.1 mmol) was dissolved in 20 ml me thanol to obtain solution A. Hexamine (0.007 g, 0.05 mmol) was dissolved in 10 ml methanol to obtain solution B. Solution B was layered carefully on solution A, and the tube was sealed and stored in room temperature. Green block crystals were obtained after two weeks. Analysis calculated for C5H8CuN2O4: C 26.85, H 3.60, N 12.52%; found: C 26.66, H 3.82, N 12.65%.
All non-hydrogen atoms were refined anisotropically. The H atoms of formate were positioned geometrically and allowed to ride on their parent atoms, with C–H = 0.95 Å and Uiso(H) = 1.2Ueq(C). The H atoms of hexamethylenetetramine the were placed in geometrically idealized positions and refined as riding atoms, with C–H(CH2) = 0.99 Å and Uiso(H) = 1.2Ueq(C).
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Cu2(CHO2)4(C6H12N4)] | F(000) = 904 |
Mr = 447.36 | Dx = 2.022 Mg m−3 Dm = 2.022 Mg m−3 Dm measured by not measured |
Orthorhombic, Pnma | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2n | Cell parameters from 1680 reflections |
a = 13.1252 (19) Å | θ = 2.4–26.4° |
b = 17.281 (3) Å | µ = 2.95 mm−1 |
c = 6.4777 (9) Å | T = 103 K |
V = 1469.3 (4) Å3 | Block, green |
Z = 4 | 0.26 × 0.24 × 0.18 mm |
Bruker SMART APEX area-detector diffractometer | 1550 independent reflections |
Radiation source: fine-focus sealed tube | 1345 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
Detector resolution: 16.0143 pixels mm-1 | θmax = 26.4°, θmin = 2.4° |
ω scans | h = −7→16 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | k = −16→21 |
Tmin = 0.469, Tmax = 0.588 | l = −8→8 |
5203 measured reflections |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.028 | w = 1/[σ2(Fo2) + (0.0488P)2 + 0.5436P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.077 | (Δ/σ)max = 0.001 |
S = 1.04 | Δρmax = 0.69 e Å−3 |
1550 reflections | Δρmin = −0.71 e Å−3 |
115 parameters |
[Cu2(CHO2)4(C6H12N4)] | V = 1469.3 (4) Å3 |
Mr = 447.36 | Z = 4 |
Orthorhombic, Pnma | Mo Kα radiation |
a = 13.1252 (19) Å | µ = 2.95 mm−1 |
b = 17.281 (3) Å | T = 103 K |
c = 6.4777 (9) Å | 0.26 × 0.24 × 0.18 mm |
Bruker SMART APEX area-detector diffractometer | 1550 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1345 reflections with I > 2σ(I) |
Tmin = 0.469, Tmax = 0.588 | Rint = 0.021 |
5203 measured reflections |
R[F2 > 2σ(F2)] = 0.028 | 0 restraints |
wR(F2) = 0.077 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.69 e Å−3 |
1550 reflections | Δρmin = −0.71 e Å−3 |
115 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.03147 (2) | 0.569254 (15) | 0.06885 (4) | 0.01482 (13) | |
N1 | 0.09051 (15) | 0.67876 (11) | 0.1987 (3) | 0.0167 (4) | |
C6 | 0.2292 (3) | 0.7500 | 0.4773 (7) | 0.0376 (11) | |
H6A | 0.2607 | 0.7963 | 0.5407 | 0.045* | 0.50 |
H6B | 0.2607 | 0.7037 | 0.5407 | 0.045* | 0.50 |
O1 | −0.06061 (14) | 0.61313 (10) | −0.1393 (3) | 0.0243 (4) | |
O2 | −0.11320 (13) | 0.49698 (10) | −0.2546 (3) | 0.0222 (4) | |
O3 | −0.08446 (14) | 0.55920 (9) | 0.2587 (3) | 0.0229 (4) | |
O4 | −0.13726 (14) | 0.44265 (9) | 0.1462 (3) | 0.0228 (4) | |
C1 | −0.11161 (19) | 0.56950 (13) | −0.2535 (4) | 0.0189 (5) | |
H1 | −0.1544 | 0.5944 | −0.3515 | 0.023* | |
C2 | −0.14152 (18) | 0.50082 (13) | 0.2619 (4) | 0.0186 (5) | |
H2 | −0.1938 | 0.5007 | 0.3634 | 0.022* | |
C3 | 0.20300 (19) | 0.68165 (14) | 0.1630 (4) | 0.0256 (6) | |
H3A | 0.2347 | 0.6346 | 0.2222 | 0.031* | |
H3B | 0.2164 | 0.6817 | 0.0126 | 0.031* | |
C4 | 0.0729 (2) | 0.68132 (15) | 0.4251 (4) | 0.0256 (6) | |
H4A | −0.0014 | 0.6813 | 0.4520 | 0.031* | |
H4B | 0.1020 | 0.6342 | 0.4889 | 0.031* | |
C5 | 0.0455 (3) | 0.7500 | 0.1069 (5) | 0.0164 (7) | |
H5A | −0.0290 | 0.7500 | 0.1301 | 0.020* | |
H5B | 0.0576 | 0.7500 | −0.0440 | 0.020* | |
N2 | 0.2502 (3) | 0.7500 | 0.2553 (6) | 0.0306 (8) | |
N3 | 0.1187 (3) | 0.7500 | 0.5219 (5) | 0.0299 (8) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.01667 (19) | 0.01185 (19) | 0.01595 (19) | −0.00041 (10) | −0.00034 (10) | −0.00042 (10) |
N1 | 0.0205 (10) | 0.0106 (9) | 0.0191 (10) | 0.0003 (8) | −0.0004 (8) | 0.0002 (8) |
C6 | 0.047 (3) | 0.0180 (19) | 0.048 (3) | 0.000 | −0.028 (2) | 0.000 |
O1 | 0.0307 (10) | 0.0168 (9) | 0.0253 (9) | 0.0018 (7) | −0.0092 (8) | 0.0001 (7) |
O2 | 0.0245 (9) | 0.0181 (9) | 0.0240 (9) | 0.0009 (7) | −0.0066 (7) | 0.0015 (7) |
O3 | 0.0232 (10) | 0.0207 (9) | 0.0248 (10) | −0.0027 (7) | 0.0062 (7) | −0.0043 (7) |
O4 | 0.0253 (9) | 0.0197 (9) | 0.0234 (9) | −0.0044 (7) | 0.0056 (8) | −0.0033 (7) |
C1 | 0.0182 (12) | 0.0205 (12) | 0.0181 (13) | 0.0038 (9) | 0.0019 (9) | 0.0032 (9) |
C2 | 0.0171 (12) | 0.0195 (12) | 0.0192 (12) | 0.0037 (10) | −0.0002 (9) | 0.0018 (9) |
C3 | 0.0215 (13) | 0.0151 (12) | 0.0401 (16) | 0.0018 (10) | −0.0030 (11) | −0.0002 (11) |
C4 | 0.0407 (16) | 0.0161 (13) | 0.0199 (13) | −0.0014 (12) | −0.0026 (11) | 0.0029 (9) |
C5 | 0.0196 (17) | 0.0127 (16) | 0.0169 (16) | 0.000 | −0.0021 (13) | 0.000 |
N2 | 0.0226 (16) | 0.0167 (15) | 0.052 (2) | 0.000 | −0.0107 (14) | 0.000 |
N3 | 0.053 (2) | 0.0145 (15) | 0.0219 (16) | 0.000 | −0.0136 (15) | 0.000 |
Cu1—O1 | 1.9632 (17) | O2—Cu1i | 1.9769 (16) |
Cu1—O3 | 1.9640 (18) | O3—C2 | 1.257 (3) |
Cu1—O2i | 1.9769 (17) | O4—C2 | 1.255 (3) |
Cu1—O4i | 1.9777 (18) | C2—H2 | 0.950 |
Cu1—N1 | 2.2112 (19) | O4—Cu1i | 1.9777 (18) |
Cu1—Cu1i | 2.6848 (6) | C3—N2 | 1.461 (3) |
N1—C4 | 1.485 (3) | C3—H3A | 0.990 |
N1—C5 | 1.489 (3) | C3—H3B | 0.990 |
N1—C3 | 1.495 (3) | C4—N3 | 1.471 (3) |
C6—N2 | 1.464 (6) | C4—H4A | 0.991 |
C6—N3 | 1.479 (6) | C4—H4B | 0.990 |
C6—H6A | 0.990 | C5—N1ii | 1.489 (3) |
C6—H6B | 0.990 | C5—H5A | 0.989 |
O1—C1 | 1.251 (3) | C5—H5B | 0.990 |
O2—C1 | 1.253 (3) | N2—C3ii | 1.461 (3) |
C1—H1 | 0.951 | N3—C4ii | 1.471 (3) |
O1—Cu1—O3 | 89.26 (8) | H5B—C5—N1 | 109.30 |
O1—Cu1—O2i | 167.34 (7) | C4—N1—Cu1 | 110.27 (15) |
H1—C1—O1 | 116.00 | H4A—C4—N3 | 109.13 |
H1—C1—O2 | 116.04 | H4B—C4—N3 | 109.16 |
O3—Cu1—O2i | 89.33 (7) | C5—N1—Cu1 | 114.62 (15) |
O1—Cu1—O4i | 89.34 (8) | C3—N1—Cu1 | 108.41 (14) |
O3—Cu1—O4i | 167.36 (7) | N2—C6—N3 | 112.1 (3) |
O2i—Cu1—O4i | 89.28 (8) | C1—O1—Cu1 | 120.20 (15) |
H2—C2—O3 | 116.33 | C1—O2—Cu1i | 124.51 (16) |
H2—C2—O4 | 116.33 | C2—O3—Cu1 | 122.90 (15) |
O1—Cu1—N1 | 98.43 (7) | C2—O4—Cu1i | 122.36 (16) |
O3—Cu1—N1 | 96.26 (7) | H3A—C3—H3B | 107.88 |
O2i—Cu1—N1 | 94.24 (7) | H4A—C4—H4B | 107.83 |
O4i—Cu1—N1 | 96.37 (7) | H5B—C5—H5A | 107.97 |
O1—Cu1—Cu1i | 85.79 (5) | O1—C1—O2 | 127.9 (2) |
O3—Cu1—Cu1i | 83.73 (5) | O4—C2—O3 | 127.3 (2) |
O2i—Cu1—Cu1i | 81.54 (5) | N2—C3—N1 | 112.5 (2) |
O4i—Cu1—Cu1i | 83.64 (5) | N3—C4—N1 | 112.4 (2) |
N1—Cu1—Cu1i | 175.78 (5) | N1—C5—N1ii | 111.5 (3) |
H3A—C3—N1 | 109.11 | C3—N2—C3ii | 107.9 (3) |
H3B—C3—N1 | 109.13 | C3—N2—C6 | 108.8 (2) |
H3A—C3—N2 | 109.08 | H6A—C6—N2 | 109.20 |
H4B—C4—N3 | 109.06 | H6B—C6—N2 | 109.20 |
C4—N1—C5 | 107.9 (2) | H6A—C6—N3 | 109.18 |
C4—N1—C3 | 107.8 (2) | H6B—C6—N3 | 109.18 |
H4A—C4—N1 | 109.08 | C3ii—N2—C6 | 108.8 (2) |
H4B—C4—N1 | 109.13 | C4ii—N3—C4 | 107.6 (3) |
C5—N1—C3 | 107.6 (2) | C4ii—N3—C6 | 108.5 (2) |
H5A—C5—N1 | 109.35 | C4—N3—C6 | 108.5 (2) |
Symmetry codes: (i) −x, −y+1, −z; (ii) x, −y+3/2, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu2(CHO2)4(C6H12N4)] |
Mr | 447.36 |
Crystal system, space group | Orthorhombic, Pnma |
Temperature (K) | 103 |
a, b, c (Å) | 13.1252 (19), 17.281 (3), 6.4777 (9) |
V (Å3) | 1469.3 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.95 |
Crystal size (mm) | 0.26 × 0.24 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART APEX area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.469, 0.588 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5203, 1550, 1345 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.625 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.028, 0.077, 1.04 |
No. of reflections | 1550 |
No. of parameters | 115 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.69, −0.71 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
This work was partially supported by the Mid-aged and Young Foundation of Qinghai University (2012-QGT-2).
References
Bruker (1997). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Chiari, B., Piovesana, O., Tarantelli, T. & Zanazzi, P. F. (1988). Inorg. Chem. 27, 3246–3248. CSD CrossRef CAS Web of Science Google Scholar
Dreyfors, J. M., Jones, S. B. & Sayed, Y. (1989). Am. Ind. Hyg. Assoc. J. 50, 579–585. CrossRef CAS PubMed Web of Science Google Scholar
Kirillov, A. M. (2011). Coord. Chem. Rev. 255, 1603–1622. Web of Science CrossRef CAS Google Scholar
Konar, S., Mukherjee, P. S. M., Drew, G. B., Ribas, J. & Chaudhuri, N. R. (2003). Inorg. Chem. 42, 2545–2552. Web of Science CSD CrossRef PubMed CAS Google Scholar
Pickardt, J. (1981). Acta Cryst. B37, 1753–1756. CSD CrossRef CAS Web of Science IUCr Journals Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sun, C. Y., Liu, S. X., Liang, D. D., Shao, K. Z., Ren, Y. H. & Su, Z. M. (2009). J. Am. Chem. Soc. 131, 1883–1888. Web of Science CSD CrossRef PubMed CAS Google Scholar
Wang, S., Hu, M.-L. & Ng, S. W. (2002). Acta Cryst. E58, m242–m244. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Wu, B. & Wang, G. (2004). Acta Cryst. E60, m1764–m1765. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The design and synthesis of metal-organic complexes or coordination polymers is a rapidly developing field in coordination and supramolecular chemistry during the past decades. Hexamethylenetetramine (hmt), also known as hexamine or urotropine, can be considered as one such simple heterocyclic compound with a cagelike structure which,owing to its high solubility in water and polar organic solvents, has found a broad variety of applications (Dreyfors et al., 1989). With regard to coordination chemistry, hmt is a versatile ligand capable of adopting different coordination modes that span from the terminal monodentate to bridging bi-, tri- and tetradentate modes. The well known [Cu2(carboxylate)4] units with four bridging carboxylate ligands in the familiar η1:η1:µ coordination mode have accessible apical coordination sites and are ideally suited to serve as a metal-based linear spacer (Konar et al. 2003; Chiari et al., 1988; Wu et al., 2004; Sun et al., 2009). To date, the title copper(II) carboxylate complex, represents an exception, as only few formate copper(II) complexes have been studied.
The crystal structure of the title complex, which is isostructural with its copper analog (Wang et al., 2002), is built of hexamethylenetetramine molecules and paddle-wheel dicopper units, both of which occupy special positions. The structure of the centrosymmetric [Cu2(HCO2)4] moiety is shown in Fig. 1. The coordination geometry of the Cu atom may be described as a square pyramid, formed by four formatee O atoms and the N atom of the hexamine . The four basal Cu—O distances fall in the range from 1.963 (2) to 1.978 (2) Å. The central hmt has mirror symmetry, and therefore there is only one independent CuII atom in the asymmetric unit. The Cu—Cu distance within the [Cu2(HCO2)4] unit is 2.6850 (7) Å indicating a strong interaction. The axial Cu(1)—N(1) distance is 2.212 (2) Å. The hexamine ligand uses only two of its four N atoms to link adjacent paddle-wheel Cu2-cluster units, to afford a zigzag chain running along the b axis of the unit cell (Fig. 2).