organic compounds
13-(Imidazol-1-yl)-11,13-dihydromelampomagnolide B monohydrate
aDepartment of Pharmaceutical Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA, and bDepartment of Chemistry, University of Kentucky, Lexington KY 40506, USA
*Correspondence e-mail: pacrooks@uams.edu
The title compound, C18H24N2O4·H2O {systematic name: (1aR,7aS,8R,10aS,10bS,E)-5-hydroxymethyl-8-[(1H-imidazol-1-yl)methyl]-1a-methyl-2,3,6,7,7a,8,10a,10b-octahydrooxireno[2′,3′:9,10]cyclodeca[1,2-b]furan-9(1aH)-one monohydrate}, an imidazole derivative of melampomagnolide B was synthesized under Michael addition conditions. The molecule is built up from fused ten-, five- (lactone) and three-membered (epoxide) rings. The internal double bond of the ten-membered ring identifies it as the cis or E isomer. The lactone ring has an envelope-type conformation, with the (chiral) C atom opposite the lactone O atoms as the flap atom. In the crystal, O—H⋯O, O—H⋯N and weak C—H⋯O hydrogen bonds link the molecules (along with water) into sheets parallel to the bc plane.
CCDC reference: 967941
Related literature
For the biological activity of similar compounds, see: El-Feraly (1984); Macias et al. (1992); Nasim et al. (2011); Nasim & Crooks (2008). For the structures of similar compounds, see; Neelakantan et al. (2009); Woods et al. (2011); Neukirch et al. (2003); Gonzalez et al. (1988).
Experimental
Crystal data
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Refinement
Data collection: APEX2 (Bruker, 2006); cell SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008b); molecular graphics: XP in SHELXTL (Sheldrick, 2008b); software used to prepare material for publication: SHELXL2013.
Supporting information
CCDC reference: 967941
10.1107/S1600536813029188/sj5362sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813029188/sj5362Isup2.hkl
To a solution of MMB (50 mg, 0.189 m mol) in methanol, was added imidazole (19.31 mg, 0.284 m mol). The reaction mixture was stirred at ambient temperature for 24 h. After completion of the reaction (monitored by thin-layer chromatography), the reaction mixture was dissolved in dichloromethane. The organic layer was separated, washed with water, dried over anhydrous Na2SO4 and concentrated under reduced pressure to afford the crude product. The crude compound was recrystallized from chloroform to obtain the title compound as colorless crystals (56 mg, yield: 89%). Melting point 398-399°K. 1H NMR (400 MHz, CDCl3): δ 7.60 (s, 1H), 7.10 (s, 1H), 7.01 (s, 1H), 5.55 (t, J=8Hz, 1H), 4.48 (dd, J=14.4 Hz, 1H), 4.32 (dd, J=14.8, 1H),3.93 (s, 2H), 3.89(t, J=9.6Hz, 1H), 2.68 (d, J=9.2 Hz, 2H), 2.34-1.90 (m, 11H), 1.88-1.53 (m, 3H), 1.04 (t, J=9.6 Hz, 1H). 13C NMR (CDCl3, 100 MHz): δ 174.9, 139.1, 138.0, 130.3, 126.8, 119.4, 81.2, 65.2, 62.5, 60.3, 48.4, 43.8, 41.6, 36.7, 26.9, 24.6, 23.4, 17.9 ppm.
H atoms were found in difference Fourier maps and subsequently placed at idealized positions with constrained distances of 0.98 Å (RCH3), 0.99 Å (R2CH2), 1.00 Å (R3CH), 0.95 Å (Csp2H). Water hydrogen coordinates were refined. Uiso(H) values were set to either 1.2Ueq or 1.5Ueq (RCH3, OH) of the attached atom.
Data collection: APEX2 (Bruker, 2006); cell
SAINT (Bruker, 2006); data reduction: SAINT (Bruker, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008b); molecular graphics: XP in SHELXTL (Sheldrick, 2008b); software used to prepare material for publication: SHELXL2013 (Sheldrick, 2008b).Fig. 1. The title molecule with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. |
C18H24N2O4·H2O | F(000) = 376 |
Mr = 350.41 | Dx = 1.335 Mg m−3 |
Monoclinic, P21 | Cu Kα radiation, λ = 1.54178 Å |
a = 9.8073 (2) Å | Cell parameters from 9966 reflections |
b = 8.2784 (1) Å | θ = 4.1–68.1° |
c = 10.7741 (2) Å | µ = 0.80 mm−1 |
β = 95.015 (1)° | T = 90 K |
V = 871.39 (3) Å3 | Tablet, colourless |
Z = 2 | 0.25 × 0.20 × 0.04 mm |
Bruker X8 Proteum diffractometer | 2437 independent reflections |
Radiation source: fine-focus rotating anode | 2425 reflections with I > 2σ(I) |
Detector resolution: 5.6 pixels mm-1 | Rint = 0.030 |
ϕ and ω scans | θmax = 68.1°, θmin = 4.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) | h = −11→11 |
Tmin = 0.836, Tmax = 0.942 | k = −9→7 |
10767 measured reflections | l = −12→11 |
Refinement on F2 | Hydrogen site location: difference Fourier map |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.024 | w = 1/[σ2(Fo2) + (0.0332P)2 + 0.170P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.061 | (Δ/σ)max < 0.001 |
S = 1.04 | Δρmax = 0.16 e Å−3 |
2437 reflections | Δρmin = −0.15 e Å−3 |
235 parameters | Extinction correction: SHELXL2013 (Sheldrick, 2008a), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
1 restraint | Extinction coefficient: 0.0090 (15) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack parameter determined using 747 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
Secondary atom site location: difference Fourier map | Absolute structure parameter: −0.03 (5) |
C18H24N2O4·H2O | V = 871.39 (3) Å3 |
Mr = 350.41 | Z = 2 |
Monoclinic, P21 | Cu Kα radiation |
a = 9.8073 (2) Å | µ = 0.80 mm−1 |
b = 8.2784 (1) Å | T = 90 K |
c = 10.7741 (2) Å | 0.25 × 0.20 × 0.04 mm |
β = 95.015 (1)° |
Bruker X8 Proteum diffractometer | 2437 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) | 2425 reflections with I > 2σ(I) |
Tmin = 0.836, Tmax = 0.942 | Rint = 0.030 |
10767 measured reflections |
R[F2 > 2σ(F2)] = 0.024 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.061 | Δρmax = 0.16 e Å−3 |
S = 1.04 | Δρmin = −0.15 e Å−3 |
2437 reflections | Absolute structure: Flack parameter determined using 747 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
235 parameters | Absolute structure parameter: −0.03 (5) |
1 restraint |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.63838 (13) | 0.11358 (19) | 0.56147 (12) | 0.0159 (3) | |
N2 | 0.61292 (14) | −0.0075 (2) | 0.74068 (12) | 0.0197 (3) | |
O1 | 0.92738 (12) | 0.85603 (16) | 0.33577 (10) | 0.0183 (3) | |
O2 | 0.83645 (12) | 0.60393 (16) | 0.51264 (9) | 0.0185 (3) | |
O3 | 0.71648 (13) | 0.48872 (17) | 0.65518 (10) | 0.0221 (3) | |
O4 | 0.47506 (11) | 0.43708 (16) | 0.02773 (10) | 0.0179 (3) | |
H4 | 0.4364 | 0.4648 | 0.0910 | 0.027* | |
C1 | 0.71890 (15) | 0.6089 (2) | 0.02275 (13) | 0.0161 (3) | |
H1A | 0.6293 | 0.6497 | 0.0017 | 0.019* | |
C2 | 0.83497 (16) | 0.7229 (2) | 0.00040 (14) | 0.0163 (3) | |
H2A | 0.8112 | 0.7803 | −0.0791 | 0.020* | |
H2B | 0.9178 | 0.6576 | −0.0099 | 0.020* | |
C3 | 0.87106 (16) | 0.8502 (2) | 0.10296 (14) | 0.0166 (4) | |
H3A | 0.9320 | 0.9330 | 0.0713 | 0.020* | |
H3B | 0.7864 | 0.9046 | 0.1245 | 0.020* | |
C4 | 0.94124 (16) | 0.7722 (2) | 0.21808 (14) | 0.0153 (3) | |
C5 | 0.85016 (16) | 0.7092 (2) | 0.30889 (14) | 0.0152 (3) | |
H5A | 0.7506 | 0.7274 | 0.2847 | 0.018* | |
C6 | 0.87955 (16) | 0.5643 (2) | 0.38885 (14) | 0.0152 (4) | |
H6A | 0.9790 | 0.5362 | 0.3940 | 0.018* | |
C7 | 0.79086 (15) | 0.4188 (2) | 0.34526 (13) | 0.0141 (3) | |
H7A | 0.7011 | 0.4603 | 0.3069 | 0.017* | |
C8 | 0.85003 (16) | 0.3049 (2) | 0.25191 (14) | 0.0165 (4) | |
H8A | 0.7947 | 0.2047 | 0.2465 | 0.020* | |
H8B | 0.9442 | 0.2750 | 0.2844 | 0.020* | |
C9 | 0.85478 (15) | 0.3742 (2) | 0.11888 (14) | 0.0164 (4) | |
H9A | 0.9322 | 0.4511 | 0.1193 | 0.020* | |
H9B | 0.8734 | 0.2847 | 0.0618 | 0.020* | |
C10 | 0.72548 (15) | 0.4597 (2) | 0.06786 (13) | 0.0147 (3) | |
C11 | 0.76625 (16) | 0.3373 (2) | 0.46888 (14) | 0.0153 (3) | |
H11A | 0.8457 | 0.2653 | 0.4942 | 0.018* | |
C12 | 0.76819 (16) | 0.4785 (2) | 0.55787 (14) | 0.0168 (3) | |
C13 | 0.63503 (16) | 0.2376 (2) | 0.46427 (14) | 0.0179 (4) | |
H13A | 0.5567 | 0.3107 | 0.4735 | 0.021* | |
H13B | 0.6201 | 0.1848 | 0.3817 | 0.021* | |
C14 | 0.59851 (15) | 0.3551 (2) | 0.06538 (14) | 0.0168 (4) | |
H14A | 0.6089 | 0.2634 | 0.0080 | 0.020* | |
H14B | 0.5918 | 0.3099 | 0.1497 | 0.020* | |
C15 | 1.08469 (16) | 0.7115 (2) | 0.20694 (15) | 0.0181 (4) | |
H15A | 1.1182 | 0.6563 | 0.2841 | 0.027* | |
H15B | 1.1448 | 0.8029 | 0.1925 | 0.027* | |
H15C | 1.0843 | 0.6358 | 0.1370 | 0.027* | |
C16 | 0.58471 (15) | 0.1233 (2) | 0.67287 (14) | 0.0178 (4) | |
H16A | 0.5334 | 0.2126 | 0.6989 | 0.021* | |
C17 | 0.68861 (16) | −0.1053 (2) | 0.66946 (15) | 0.0186 (4) | |
H17A | 0.7239 | −0.2084 | 0.6940 | 0.022* | |
C18 | 0.70535 (15) | −0.0320 (2) | 0.55829 (14) | 0.0167 (3) | |
H18A | 0.7534 | −0.0731 | 0.4923 | 0.020* | |
O1W | 0.45357 (13) | 0.47330 (19) | −0.23096 (12) | 0.0248 (3) | |
H1W | 0.458 (2) | 0.470 (4) | −0.150 (2) | 0.037* | |
H2W | 0.534 (3) | 0.492 (4) | −0.249 (2) | 0.037* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0161 (6) | 0.0167 (8) | 0.0149 (6) | −0.0029 (6) | 0.0018 (5) | 0.0004 (6) |
N2 | 0.0210 (7) | 0.0198 (8) | 0.0187 (6) | −0.0055 (6) | 0.0036 (5) | 0.0015 (6) |
O1 | 0.0228 (5) | 0.0157 (7) | 0.0168 (5) | −0.0042 (5) | 0.0042 (4) | −0.0020 (5) |
O2 | 0.0261 (6) | 0.0167 (7) | 0.0131 (5) | −0.0028 (5) | 0.0043 (4) | −0.0003 (5) |
O3 | 0.0317 (6) | 0.0194 (7) | 0.0163 (5) | 0.0021 (6) | 0.0088 (5) | 0.0018 (5) |
O4 | 0.0141 (5) | 0.0227 (7) | 0.0170 (5) | 0.0000 (5) | 0.0021 (4) | −0.0003 (5) |
C1 | 0.0143 (7) | 0.0191 (9) | 0.0149 (7) | 0.0006 (7) | 0.0003 (5) | −0.0004 (7) |
C2 | 0.0173 (7) | 0.0167 (9) | 0.0147 (7) | 0.0001 (7) | 0.0005 (5) | 0.0041 (7) |
C3 | 0.0163 (7) | 0.0151 (9) | 0.0186 (7) | −0.0016 (7) | 0.0022 (6) | 0.0021 (7) |
C4 | 0.0175 (7) | 0.0134 (9) | 0.0150 (7) | −0.0018 (6) | 0.0014 (6) | −0.0012 (6) |
C5 | 0.0161 (7) | 0.0138 (9) | 0.0157 (7) | 0.0000 (7) | 0.0022 (6) | −0.0008 (7) |
C6 | 0.0161 (7) | 0.0168 (10) | 0.0130 (7) | 0.0004 (6) | 0.0031 (6) | 0.0003 (6) |
C7 | 0.0157 (7) | 0.0130 (9) | 0.0139 (7) | 0.0004 (7) | 0.0019 (5) | 0.0019 (6) |
C8 | 0.0185 (7) | 0.0144 (9) | 0.0166 (7) | 0.0023 (7) | 0.0016 (6) | 0.0006 (7) |
C9 | 0.0170 (7) | 0.0172 (9) | 0.0154 (7) | 0.0014 (7) | 0.0038 (6) | −0.0005 (7) |
C10 | 0.0160 (7) | 0.0174 (9) | 0.0109 (6) | −0.0005 (7) | 0.0021 (5) | −0.0018 (6) |
C11 | 0.0171 (7) | 0.0152 (9) | 0.0135 (7) | 0.0000 (7) | 0.0012 (5) | 0.0023 (6) |
C12 | 0.0186 (7) | 0.0159 (9) | 0.0156 (7) | 0.0002 (7) | −0.0008 (6) | 0.0030 (6) |
C13 | 0.0182 (7) | 0.0188 (10) | 0.0165 (7) | −0.0015 (7) | 0.0001 (6) | 0.0045 (7) |
C14 | 0.0184 (7) | 0.0157 (9) | 0.0164 (7) | −0.0006 (7) | 0.0019 (5) | 0.0001 (7) |
C15 | 0.0152 (7) | 0.0223 (10) | 0.0168 (7) | −0.0015 (7) | 0.0006 (6) | 0.0013 (7) |
C16 | 0.0162 (7) | 0.0190 (10) | 0.0187 (7) | −0.0020 (7) | 0.0044 (6) | −0.0017 (7) |
C17 | 0.0194 (7) | 0.0144 (9) | 0.0216 (8) | −0.0017 (7) | −0.0005 (6) | 0.0009 (7) |
C18 | 0.0174 (7) | 0.0141 (9) | 0.0186 (7) | −0.0012 (6) | 0.0014 (6) | −0.0039 (7) |
O1W | 0.0252 (6) | 0.0304 (8) | 0.0190 (6) | 0.0031 (6) | 0.0024 (5) | 0.0011 (6) |
N1—C16 | 1.354 (2) | C7—C8 | 1.529 (2) |
N1—C18 | 1.374 (2) | C7—C11 | 1.531 (2) |
N1—C13 | 1.465 (2) | C7—H7A | 1.0000 |
N2—C16 | 1.322 (2) | C8—C9 | 1.549 (2) |
N2—C17 | 1.377 (2) | C8—H8A | 0.9900 |
O1—C5 | 1.448 (2) | C8—H8B | 0.9900 |
O1—C4 | 1.4623 (19) | C9—C10 | 1.513 (2) |
O2—C12 | 1.350 (2) | C9—H9A | 0.9900 |
O2—C6 | 1.4709 (18) | C9—H9B | 0.9900 |
O3—C12 | 1.207 (2) | C10—C14 | 1.515 (2) |
O4—C14 | 1.416 (2) | C11—C12 | 1.511 (2) |
O4—H4 | 0.8400 | C11—C13 | 1.526 (2) |
C1—C10 | 1.327 (3) | C11—H11A | 1.0000 |
C1—C2 | 1.514 (2) | C13—H13A | 0.9900 |
C1—H1A | 0.9500 | C13—H13B | 0.9900 |
C2—C3 | 1.545 (2) | C14—H14A | 0.9900 |
C2—H2A | 0.9900 | C14—H14B | 0.9900 |
C2—H2B | 0.9900 | C15—H15A | 0.9800 |
C3—C4 | 1.510 (2) | C15—H15B | 0.9800 |
C3—H3A | 0.9900 | C15—H15C | 0.9800 |
C3—H3B | 0.9900 | C16—H16A | 0.9500 |
C4—C5 | 1.477 (2) | C17—C18 | 1.365 (2) |
C4—C15 | 1.509 (2) | C17—H17A | 0.9500 |
C5—C6 | 1.490 (2) | C18—H18A | 0.9500 |
C5—H5A | 1.0000 | O1W—H1W | 0.87 (3) |
C6—C7 | 1.536 (2) | O1W—H2W | 0.85 (3) |
C6—H6A | 1.0000 | ||
C16—N1—C18 | 107.33 (15) | C7—C8—H8B | 108.5 |
C16—N1—C13 | 127.27 (16) | C9—C8—H8B | 108.5 |
C18—N1—C13 | 125.28 (14) | H8A—C8—H8B | 107.5 |
C16—N2—C17 | 105.71 (14) | C10—C9—C8 | 114.69 (13) |
C5—O1—C4 | 60.97 (10) | C10—C9—H9A | 108.6 |
C12—O2—C6 | 110.30 (13) | C8—C9—H9A | 108.6 |
C14—O4—H4 | 109.5 | C10—C9—H9B | 108.6 |
C10—C1—C2 | 128.70 (15) | C8—C9—H9B | 108.6 |
C10—C1—H1A | 115.6 | H9A—C9—H9B | 107.6 |
C2—C1—H1A | 115.7 | C1—C10—C9 | 125.51 (15) |
C1—C2—C3 | 116.07 (13) | C1—C10—C14 | 120.80 (14) |
C1—C2—H2A | 108.3 | C9—C10—C14 | 113.61 (15) |
C3—C2—H2A | 108.3 | C12—C11—C13 | 113.76 (13) |
C1—C2—H2B | 108.3 | C12—C11—C7 | 102.53 (14) |
C3—C2—H2B | 108.3 | C13—C11—C7 | 113.99 (12) |
H2A—C2—H2B | 107.4 | C12—C11—H11A | 108.8 |
C4—C3—C2 | 110.81 (14) | C13—C11—H11A | 108.8 |
C4—C3—H3A | 109.5 | C7—C11—H11A | 108.8 |
C2—C3—H3A | 109.5 | O3—C12—O2 | 121.27 (17) |
C4—C3—H3B | 109.5 | O3—C12—C11 | 128.51 (17) |
C2—C3—H3B | 109.5 | O2—C12—C11 | 110.21 (13) |
H3A—C3—H3B | 108.1 | N1—C13—C11 | 112.93 (12) |
O1—C4—C5 | 59.05 (10) | N1—C13—H13A | 109.0 |
O1—C4—C15 | 112.65 (12) | C11—C13—H13A | 109.0 |
C5—C4—C15 | 123.88 (15) | N1—C13—H13B | 109.0 |
O1—C4—C3 | 116.05 (14) | C11—C13—H13B | 109.0 |
C5—C4—C3 | 115.89 (13) | H13A—C13—H13B | 107.8 |
C15—C4—C3 | 116.01 (13) | O4—C14—C10 | 114.33 (14) |
O1—C5—C4 | 59.98 (10) | O4—C14—H14A | 108.7 |
O1—C5—C6 | 119.25 (12) | C10—C14—H14A | 108.7 |
C4—C5—C6 | 124.74 (15) | O4—C14—H14B | 108.7 |
O1—C5—H5A | 114.0 | C10—C14—H14B | 108.7 |
C4—C5—H5A | 114.0 | H14A—C14—H14B | 107.6 |
C6—C5—H5A | 114.0 | C4—C15—H15A | 109.5 |
O2—C6—C5 | 106.78 (14) | C4—C15—H15B | 109.5 |
O2—C6—C7 | 104.61 (12) | H15A—C15—H15B | 109.5 |
C5—C6—C7 | 112.27 (12) | C4—C15—H15C | 109.5 |
O2—C6—H6A | 111.0 | H15A—C15—H15C | 109.5 |
C5—C6—H6A | 111.0 | H15B—C15—H15C | 109.5 |
C7—C6—H6A | 111.0 | N2—C16—N1 | 111.24 (16) |
C8—C7—C11 | 113.47 (14) | N2—C16—H16A | 124.4 |
C8—C7—C6 | 116.59 (13) | N1—C16—H16A | 124.4 |
C11—C7—C6 | 102.00 (12) | C18—C17—N2 | 109.84 (16) |
C8—C7—H7A | 108.1 | C18—C17—H17A | 125.1 |
C11—C7—H7A | 108.1 | N2—C17—H17A | 125.1 |
C6—C7—H7A | 108.1 | C17—C18—N1 | 105.87 (14) |
C7—C8—C9 | 115.08 (14) | C17—C18—H18A | 127.1 |
C7—C8—H8A | 108.5 | N1—C18—H18A | 127.1 |
C9—C8—H8A | 108.5 | H1W—O1W—H2W | 106 (2) |
C10—C1—C2—C3 | −98.0 (2) | C2—C1—C10—C14 | −170.69 (14) |
C1—C2—C3—C4 | 72.09 (17) | C8—C9—C10—C1 | 126.24 (17) |
C5—O1—C4—C15 | −117.00 (17) | C8—C9—C10—C14 | −56.95 (19) |
C5—O1—C4—C3 | 105.88 (16) | C8—C7—C11—C12 | 156.85 (12) |
C2—C3—C4—O1 | −154.00 (13) | C6—C7—C11—C12 | 30.61 (15) |
C2—C3—C4—C5 | −87.53 (18) | C8—C7—C11—C13 | −79.73 (17) |
C2—C3—C4—C15 | 70.32 (19) | C6—C7—C11—C13 | 154.03 (14) |
C4—O1—C5—C6 | 115.52 (17) | C6—O2—C12—O3 | −175.49 (14) |
C15—C4—C5—O1 | 97.94 (17) | C6—O2—C12—C11 | 3.08 (17) |
C3—C4—C5—O1 | −106.14 (16) | C13—C11—C12—O3 | 32.8 (2) |
O1—C4—C5—C6 | −106.62 (16) | C7—C11—C12—O3 | 156.40 (16) |
C15—C4—C5—C6 | −8.7 (3) | C13—C11—C12—O2 | −145.62 (13) |
C3—C4—C5—C6 | 147.24 (15) | C7—C11—C12—O2 | −22.05 (16) |
C12—O2—C6—C5 | 136.46 (13) | C16—N1—C13—C11 | 97.44 (18) |
C12—O2—C6—C7 | 17.28 (15) | C18—N1—C13—C11 | −78.22 (19) |
O1—C5—C6—O2 | 67.27 (17) | C12—C11—C13—N1 | −85.46 (18) |
C4—C5—C6—O2 | 139.25 (15) | C7—C11—C13—N1 | 157.44 (14) |
O1—C5—C6—C7 | −178.64 (13) | C1—C10—C14—O4 | −8.0 (2) |
C4—C5—C6—C7 | −106.66 (17) | C9—C10—C14—O4 | 174.99 (12) |
O2—C6—C7—C8 | −153.79 (12) | C17—N2—C16—N1 | 0.21 (18) |
C5—C6—C7—C8 | 90.80 (17) | C18—N1—C16—N2 | −0.26 (18) |
O2—C6—C7—C11 | −29.62 (15) | C13—N1—C16—N2 | −176.55 (14) |
C5—C6—C7—C11 | −145.03 (13) | C16—N2—C17—C18 | −0.07 (17) |
C11—C7—C8—C9 | 170.63 (12) | N2—C17—C18—N1 | −0.08 (17) |
C6—C7—C8—C9 | −71.29 (17) | C16—N1—C18—C17 | 0.20 (17) |
C7—C8—C9—C10 | −45.1 (2) | C13—N1—C18—C17 | 176.58 (13) |
C2—C1—C10—C9 | 5.9 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4···N2i | 0.84 | 1.93 | 2.7491 (17) | 164 |
C13—H13B···O1Wii | 0.99 | 2.45 | 3.388 (2) | 157 |
C15—H15B···O3iii | 0.98 | 2.55 | 3.282 (2) | 131 |
C16—H16A···O1Wiv | 0.95 | 2.44 | 3.370 (2) | 167 |
C17—H17A···O3v | 0.95 | 2.54 | 3.377 (2) | 147 |
C18—H18A···O1v | 0.95 | 2.57 | 3.5016 (19) | 167 |
O1W—H1W···O4 | 0.87 (3) | 1.93 (3) | 2.7928 (17) | 173 (3) |
O1W—H2W···O3vi | 0.85 (3) | 2.14 (3) | 2.9534 (19) | 162 (2) |
Symmetry codes: (i) −x+1, y+1/2, −z+1; (ii) −x+1, y−1/2, −z; (iii) −x+2, y+1/2, −z+1; (iv) x, y, z+1; (v) x, y−1, z; (vi) x, y, z−1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4···N2i | 0.84 | 1.93 | 2.7491 (17) | 164.2 |
C13—H13B···O1Wii | 0.99 | 2.45 | 3.388 (2) | 157.1 |
C15—H15B···O3iii | 0.98 | 2.55 | 3.282 (2) | 131.1 |
C16—H16A···O1Wiv | 0.95 | 2.44 | 3.370 (2) | 166.6 |
C17—H17A···O3v | 0.95 | 2.54 | 3.377 (2) | 146.7 |
C18—H18A···O1v | 0.95 | 2.57 | 3.5016 (19) | 167.0 |
O1W—H1W···O4 | 0.87 (3) | 1.93 (3) | 2.7928 (17) | 173 (3) |
O1W—H2W···O3vi | 0.85 (3) | 2.14 (3) | 2.9534 (19) | 162 (2) |
Symmetry codes: (i) −x+1, y+1/2, −z+1; (ii) −x+1, y−1/2, −z; (iii) −x+2, y+1/2, −z+1; (iv) x, y, z+1; (v) x, y−1, z; (vi) x, y, z−1. |
Acknowledgements
This work was supported by NIH/NCI grant CA158275.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Melampomagnolide B (MMB) was derived from parthenolide (PTL) via selenium oxide mediated oxidation of the C10 methyl group of PTL (Macias et al., 1992; Neukirch et al., 2003). MMB is a melampolide originally isolated from Magnolia grandiflora and characterized by X-ray diffraction analysis (El-Feraly, 1984; Gonzalez et al., 1988), and has been identified as a new anti-leukemic sesquiterpene with properties similar to PTL (Nasim et al., 2011).
Recently, Nasim et al. (2008) reported formation of amino-parthenolide derivatives under Michael addition reaction conditions. These compounds showed more potency as antileukemic agents and improved water solubility relative to PTL. To further improve water solubility of melampomagnolide B, we synthesized an imidazole derivative by the reaction of MMB with imidazole via Michael addition chemistry (Neelakantan et al., 2009; Woods et al., 2011) to afford the title compound, which was re-crystallized from chloroform.
To obtain detailed information on the structural conformation of this molecule, establish the geometry of the double bond (C9═C10) and orientation of the imidazole moiety, a single-crystal X-ray structure determination has been carried out. This has revealed that the double bond of the title compound has the E-geometry. In the crystal, intermolecular O—H···O, O—H···N and weak C—H···O hydrogen bonds link the molecules (along with water) into sheets parallel to the bc-plane.